AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0843280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843280 MtrunA17_Chr5g0413961 95.238 105 5 0 1 105 248 352 2.23e-66 203
Msa0843280 MtrunA17_Chr3g0126101 44.118 102 53 1 3 104 243 340 1.41e-25 97.4
Msa0843280 MtrunA17_Chr5g0413921 40.777 103 54 1 3 105 247 342 6.88e-24 93.2
Msa0843280 MtrunA17_Chr4g0059311 40.777 103 59 2 3 104 252 353 4.65e-23 90.9
Msa0843280 MtrunA17_Chr5g0413951 48.148 81 42 0 3 83 247 327 8.36e-23 90.1
Msa0843280 MtrunA17_Chr5g0413931 39.216 102 60 1 3 104 246 345 3.21e-22 88.6
Msa0843280 MtrunA17_Chr3g0142131 40.206 97 55 1 5 98 275 371 1.98e-21 87.0
Msa0843280 MtrunA17_Chr8g0334721 42.991 107 50 4 7 103 35 140 3.60e-21 82.4
Msa0843280 MtrunA17_Chr2g0290611 45.783 83 45 0 3 85 254 336 4.02e-21 85.9
Msa0843280 MtrunA17_Chr5g0413941 45.679 81 44 0 3 83 247 327 4.11e-21 85.5
Msa0843280 MtrunA17_Chr1g0155761 46.341 82 44 0 5 86 281 362 7.97e-21 85.1
Msa0843280 MtrunA17_Chr6g0483401 45.882 85 46 0 3 87 254 338 8.88e-21 84.7
Msa0843280 MtrunA17_Chr7g0227921 48.235 85 42 2 20 103 267 350 2.28e-19 80.9
Msa0843280 MtrunA17_Chr6g0451241 46.988 83 42 2 23 104 21 102 2.49e-19 76.3
Msa0843280 MtrunA17_Chr8g0334751 40.860 93 47 1 7 99 256 340 3.55e-19 80.5
Msa0843280 MtrunA17_Chr1g0186611 37.363 91 57 0 6 96 258 348 2.66e-18 78.2
Msa0843280 MtrunA17_Chr3g0114731 42.268 97 53 1 7 100 260 356 3.96e-18 77.8
Msa0843280 MtrunA17_Chr2g0278541 36.170 94 59 1 3 95 260 353 5.45e-18 77.4
Msa0843280 MtrunA17_Chr3g0129601 44.330 97 51 3 1 96 270 364 1.26e-17 76.3
Msa0843280 MtrunA17_Chr2g0310441 42.105 76 44 0 6 81 254 329 1.59e-17 75.9
Msa0843280 MtrunA17_Chr2g0278021 39.362 94 55 1 3 96 134 225 1.59e-17 75.1
Msa0843280 MtrunA17_Chr6g0451211 40.000 105 61 2 1 104 250 353 1.72e-17 75.9
Msa0843280 MtrunA17_Chr1g0150151 38.235 102 57 1 3 104 254 349 1.93e-17 75.9
Msa0843280 MtrunA17_Chr8g0383731 40.860 93 54 1 3 95 251 342 2.76e-17 75.1
Msa0843280 MtrunA17_Chr4g0073241 34.615 104 57 3 12 104 255 358 8.70e-17 73.9
Msa0843280 MtrunA17_Chr8g0334771 40.789 76 45 0 6 81 254 329 9.05e-17 73.9
Msa0843280 MtrunA17_Chr6g0451191 38.462 104 62 2 1 103 122 224 1.24e-16 72.0
Msa0843280 MtrunA17_Chr2g0278551 40.741 81 48 0 3 83 254 334 1.64e-16 73.2
Msa0843280 MtrunA17_Chr8g0334761 37.374 99 60 1 7 105 255 351 3.17e-16 72.4
Msa0843280 MtrunA17_Chr2g0278561 40.741 81 48 0 3 83 258 338 4.13e-16 72.0
Msa0843280 MtrunA17_Chr1g0171301 39.744 78 47 0 7 84 261 338 8.04e-16 71.2
Msa0843280 MtrunA17_Chr1g0186601 35.556 90 58 0 6 95 258 347 9.62e-16 70.9
Msa0843280 MtrunA17_Chr7g0271561 37.209 86 54 0 1 86 252 337 1.04e-15 70.9
Msa0843280 MtrunA17_Chr7g0255561 38.554 83 51 0 1 83 256 338 1.18e-15 70.9
Msa0843280 MtrunA17_Chr7g0255581 38.554 83 51 0 1 83 256 338 1.18e-15 70.9
Msa0843280 MtrunA17_Chr4g0051021 38.554 83 51 0 1 83 254 336 3.47e-15 69.3
Msa0843280 MtrunA17_Chr2g0332001 38.776 98 58 1 3 100 278 373 4.79e-15 69.3
Msa0843280 MtrunA17_Chr5g0407971 33.333 105 64 2 3 105 265 365 6.64e-15 68.6
Msa0843280 MtrunA17_Chr3g0114711 45.333 75 41 0 7 81 294 368 1.07e-14 68.2
Msa0843280 MtrunA17_Chr3g0114691 37.778 90 51 1 3 87 262 351 1.17e-14 68.2
Msa0843280 MtrunA17_Chr1g0160171 41.250 80 47 0 3 82 256 335 1.37e-14 67.8
Msa0843280 MtrunA17_Chr4g0050881 37.037 81 51 0 3 83 251 331 1.39e-14 67.8
Msa0843280 MtrunA17_Chr1g0177231 36.000 75 48 0 9 83 28 102 2.00e-14 64.3
Msa0843280 MtrunA17_Chr1g0172891 37.681 69 43 0 15 83 12 80 2.01e-14 63.9
Msa0843280 MtrunA17_Chr1g0186561 41.538 65 38 0 20 84 273 337 2.28e-14 67.0
Msa0843280 MtrunA17_Chr1g0164831 30.851 94 65 0 3 96 242 335 2.70e-14 67.0
Msa0843280 MtrunA17_Chr3g0081421 37.037 81 51 0 1 81 260 340 4.62e-14 66.2
Msa0843280 MtrunA17_Chr1g0211811 36.905 84 46 2 15 96 5 83 4.79e-14 62.0
Msa0843280 MtrunA17_Chr1g0186641 32.979 94 63 0 6 99 255 348 6.17e-14 65.9
Msa0843280 MtrunA17_Chr4g0050931 37.037 81 51 0 3 83 220 300 8.11e-14 65.5
Msa0843280 MtrunA17_Chr8g0354121 32.000 100 60 1 1 100 256 347 9.79e-14 65.5
Msa0843280 MtrunA17_Chr3g0126091 33.962 106 69 1 1 105 252 357 1.06e-13 65.1
Msa0843280 MtrunA17_Chr1g0160111 34.884 86 56 0 1 86 251 336 1.15e-13 65.1
Msa0843280 MtrunA17_Chr5g0429001 37.975 79 49 0 3 81 196 274 1.22e-13 65.1
Msa0843280 MtrunA17_Chr3g0081511 34.146 82 54 0 1 82 257 338 1.50e-13 65.1
Msa0843280 MtrunA17_Chr5g0404811 32.099 81 55 0 6 86 138 218 4.07e-13 62.8
Msa0843280 MtrunA17_Chr2g0284261 35.802 81 52 0 3 83 246 326 5.08e-13 63.2
Msa0843280 MtrunA17_Chr4g0050891 39.189 74 45 0 3 76 258 331 1.08e-12 62.4
Msa0843280 MtrunA17_Chr1g0184221 33.333 81 54 0 3 83 266 346 1.15e-12 62.4
Msa0843280 MtrunA17_Chr4g0050941 37.500 72 45 0 23 94 280 351 1.23e-12 62.4
Msa0843280 MtrunA17_Chr6g0451251 42.056 107 57 2 1 104 248 352 1.31e-12 62.0
Msa0843280 MtrunA17_Chr1g0186571 35.897 78 50 0 7 84 256 333 1.33e-12 62.0
Msa0843280 MtrunA17_Chr5g0441761 35.443 79 51 0 3 81 249 327 1.38e-12 62.0
Msa0843280 MtrunA17_Chr5g0428881 36.709 79 50 0 3 81 261 339 3.34e-12 61.2
Msa0843280 MtrunA17_Chr6g0463971 35.556 90 57 1 3 92 258 346 4.85e-12 60.5
Msa0843280 MtrunA17_Chr1g0182291 32.039 103 67 1 1 103 252 351 9.02e-12 59.7
Msa0843280 MtrunA17_Chr5g0407991 29.808 104 68 2 3 104 263 363 1.08e-11 59.7
Msa0843280 MtrunA17_Chr8g0369841 29.293 99 70 0 6 104 266 364 1.84e-11 58.9
Msa0843280 MtrunA17_Chr6g0451201 46.341 82 42 2 23 103 267 347 1.89e-11 58.9
Msa0843280 MtrunA17_Chr6g0451171 39.423 104 61 2 1 103 247 349 2.11e-11 58.9
Msa0843280 MtrunA17_Chr3g0084091 35.443 79 51 0 3 81 171 249 2.21e-11 58.5
Msa0843280 MtrunA17_Chr7g0263101 32.911 79 53 0 3 81 254 332 4.25e-11 57.8
Msa0843280 MtrunA17_Chr3g0129571 31.683 101 58 4 1 100 251 341 6.38e-11 57.4
Msa0843280 MtrunA17_Chr5g0408001 29.412 102 72 0 3 104 264 365 7.68e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843280 AT3G28070.5 45.098 102 51 2 3 104 130 226 5.85e-24 91.7
Msa0843280 AT3G28070.2 45.098 102 51 2 3 104 167 263 9.76e-24 91.7
Msa0843280 AT3G28070.1 45.098 102 51 2 3 104 259 355 3.99e-23 91.7
Msa0843280 AT3G28100.1 48.148 81 41 1 3 83 256 335 2.97e-21 86.3
Msa0843280 AT3G28130.3 43.182 88 45 1 18 105 144 226 1.07e-20 83.2
Msa0843280 AT3G28080.9 47.826 69 36 0 15 83 141 209 1.27e-20 82.8
Msa0843280 AT3G28130.5 43.182 88 45 1 18 105 183 265 1.54e-20 83.6
Msa0843280 AT3G28130.1 43.182 88 45 1 18 105 183 265 1.54e-20 83.6
Msa0843280 AT3G28080.4 48.529 68 35 0 16 83 125 192 1.60e-20 82.4
Msa0843280 AT3G28080.5 47.826 69 36 0 15 83 178 246 2.13e-20 83.2
Msa0843280 AT3G28080.7 47.826 69 36 0 15 83 178 246 2.13e-20 83.2
Msa0843280 AT3G28080.8 47.826 69 36 0 15 83 178 246 2.13e-20 83.2
Msa0843280 AT3G28080.6 47.826 69 36 0 15 83 178 246 2.13e-20 83.2
Msa0843280 AT3G28130.2 43.182 88 45 1 18 105 269 351 2.62e-20 84.0
Msa0843280 AT3G28080.3 48.529 68 35 0 16 83 214 281 5.69e-20 82.4
Msa0843280 AT3G28080.2 47.826 69 36 0 15 83 259 327 6.75e-20 82.8
Msa0843280 AT3G28080.1 47.826 69 36 0 15 83 267 335 6.82e-20 82.8
Msa0843280 AT1G75500.1 45.679 81 44 0 3 83 266 346 1.21e-19 82.4
Msa0843280 AT1G75500.2 45.679 81 44 0 3 83 266 346 1.21e-19 82.4
Msa0843280 AT5G40210.1 44.828 87 46 2 18 103 251 336 3.32e-19 80.9
Msa0843280 AT3G28050.1 37.391 115 60 1 1 103 246 360 6.90e-19 80.1
Msa0843280 AT3G18200.1 37.255 102 64 0 3 104 142 243 2.53e-18 77.4
Msa0843280 AT3G18200.2 37.255 102 64 0 3 104 272 373 7.65e-18 77.4
Msa0843280 AT5G40230.1 43.210 81 44 2 19 99 279 357 3.01e-17 75.5
Msa0843280 AT1G44800.1 40.741 81 48 0 2 82 249 329 4.96e-17 75.1
Msa0843280 AT5G40240.1 39.286 84 51 0 1 84 260 343 9.14e-17 74.3
Msa0843280 AT5G40240.3 39.286 84 51 0 1 84 260 343 9.14e-17 74.3
Msa0843280 AT5G40240.2 39.286 84 51 0 1 84 274 357 1.02e-16 74.3
Msa0843280 AT1G43650.1 37.209 86 54 0 1 86 241 326 1.04e-16 73.9
Msa0843280 AT4G28040.1 36.170 94 54 2 14 101 249 342 1.75e-16 73.6
Msa0843280 AT4G28040.5 36.170 94 54 2 14 101 249 342 1.75e-16 73.6
Msa0843280 AT4G28040.3 36.170 94 54 2 14 101 249 342 1.75e-16 73.6
Msa0843280 AT4G28040.4 36.170 94 54 2 14 101 249 342 1.75e-16 73.6
Msa0843280 AT4G28040.2 36.170 94 54 2 14 101 249 342 1.75e-16 73.6
Msa0843280 AT4G08300.1 39.506 81 49 0 2 82 252 332 5.58e-16 72.0
Msa0843280 AT1G68170.1 36.607 112 56 2 3 99 245 356 5.61e-16 72.0
Msa0843280 AT1G68170.2 40.741 81 48 0 3 83 255 335 3.16e-15 70.1
Msa0843280 AT4G30420.2 31.868 91 62 0 7 97 255 345 4.63e-15 69.7
Msa0843280 AT4G30420.1 31.868 91 62 0 7 97 245 335 4.89e-15 69.3
Msa0843280 AT1G25270.1 37.113 97 60 1 1 96 242 338 5.63e-15 69.3
Msa0843280 AT5G64700.1 34.343 99 64 1 1 98 252 350 6.43e-15 68.9
Msa0843280 AT5G07050.1 39.286 84 51 0 1 84 263 346 7.56e-15 68.9
Msa0843280 AT1G21890.1 32.000 100 65 1 8 104 264 363 2.23e-13 64.7
Msa0843280 AT4G15540.1 40.000 80 48 0 3 82 246 325 4.01e-13 63.9
Msa0843280 AT4G15540.2 40.000 80 48 0 3 82 246 325 4.01e-13 63.9
Msa0843280 AT2G39510.1 36.250 80 51 0 3 82 248 327 5.59e-13 63.5
Msa0843280 AT2G40900.1 38.462 78 48 0 1 78 243 320 9.01e-13 63.2
Msa0843280 AT1G70260.1 35.354 99 54 2 16 104 272 370 1.04e-12 62.8
Msa0843280 AT3G30340.1 31.325 83 57 0 3 85 251 333 6.92e-12 60.5
Msa0843280 AT4G19185.2 34.146 82 54 0 3 84 196 277 7.67e-12 60.5
Msa0843280 AT4G19185.1 33.735 83 55 0 3 85 274 356 8.13e-12 60.5
Msa0843280 AT3G53210.2 35.802 81 52 0 3 83 193 273 1.06e-11 59.7
Msa0843280 AT3G53210.1 35.802 81 52 0 3 83 250 330 1.06e-11 60.1
Msa0843280 AT1G09380.1 32.000 75 51 0 4 78 252 326 2.67e-11 58.9
Msa0843280 AT5G45370.6 27.368 95 69 0 3 97 171 265 3.37e-11 58.2
Msa0843280 AT5G45370.5 27.368 95 69 0 3 97 171 265 3.37e-11 58.2
Msa0843280 AT5G45370.3 27.368 95 69 0 3 97 213 307 3.63e-11 58.5
Msa0843280 AT5G45370.2 27.368 95 69 0 3 97 273 367 4.26e-11 58.2
Msa0843280 AT5G45370.4 27.368 95 69 0 3 97 273 367 4.26e-11 58.2
Msa0843280 AT4G08290.1 33.333 93 61 1 3 95 254 345 4.27e-11 58.2
Msa0843280 AT5G45370.1 27.368 95 69 0 3 97 249 343 4.49e-11 58.2
Msa0843280 AT5G13670.1 34.066 91 59 1 15 105 262 351 5.47e-11 58.2

Find 115 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATTTGAATTGGATTT+TGG 0.037445 5_4:+20956210 Msa0843280:five_prime_UTR
TTTATAAATTGTTCAATATT+TGG 0.130770 5_4:-20955251 None:intergenic
CTTCAAAGTTCAACTATTAT+TGG 0.135061 5_4:-20954850 None:intergenic
CCCAAAATCCAATTCAAATT+TGG 0.154023 5_4:-20956211 None:intergenic
CTCAATATGTAAATCAATAT+TGG 0.178556 5_4:+20955136 Msa0843280:five_prime_UTR
AGAGACATCATTATTAAATT+TGG 0.199198 5_4:+20955676 Msa0843280:five_prime_UTR
AAAATGGATTTCAGGTAAAA+TGG 0.211382 5_4:+20954228 Msa0843280:five_prime_UTR
TCTTTGATACTTTATTTAAA+AGG 0.214893 5_4:+20955555 Msa0843280:five_prime_UTR
CTCAATTTAATGGTTAAATT+AGG 0.229946 5_4:+20956035 Msa0843280:five_prime_UTR
TATTTGTGAAATGAAGATTT+TGG 0.259297 5_4:+20954353 Msa0843280:five_prime_UTR
CTTAGTCGTGATATTGGAAT+TGG 0.268624 5_4:-20955454 None:intergenic
CATAAAAGCAAGGTAAATTA+TGG 0.269601 5_4:-20955167 None:intergenic
TTGATCTCTAACCACAATTA+AGG 0.270039 5_4:-20956475 None:intergenic
ATTCCTCTTAGTCGTGATAT+TGG 0.276002 5_4:-20955460 None:intergenic
TTCTGTTTGCTTGCTCTCAT+AGG 0.296087 5_4:+20948186 Msa0843280:five_prime_UTR
TTTATTGATTAAAATTCATT+TGG 0.299718 5_4:-20954257 None:intergenic
TACTATAGTTCCTATTGCTT+TGG 0.311918 5_4:-20956095 None:intergenic
GAATAATAATATGTAATAGA+AGG 0.334076 5_4:-20955066 None:intergenic
TTAGGATTGAAAGAATATAT+TGG 0.334290 5_4:+20956053 Msa0843280:five_prime_UTR
TACATAAAGTGTAAATTATT+AGG 0.334975 5_4:-20954925 None:intergenic
TTTGAAGTTAATTAAATGTT+GGG 0.341414 5_4:+20954866 Msa0843280:five_prime_UTR
TTCAATGTGGTACATATATC+AGG 0.347163 5_4:+20956267 Msa0843280:five_prime_UTR
TTTATTCATTCCATCTTTCA+TGG 0.347498 5_4:-20947911 None:intergenic
CCTTAGCTTTGTTTATCAAC+AGG 0.352160 5_4:+20947983 Msa0843280:five_prime_UTR
ATATAAATTAATAATAGTTA+TGG 0.352337 5_4:-20958401 None:intergenic
TTGTCTTACCTGAAAACAAT+AGG 0.357746 5_4:+20954326 Msa0843280:five_prime_UTR
TAACAGGCAATAGCTGCAAT+AGG 0.358608 5_4:+20957894 Msa0843280:intron
ATGGGAACTAAAGCTTGATA+TGG 0.364178 5_4:+20956503 Msa0843280:exon
ATAGTTATGGGTTCTTGTTA+AGG 0.381892 5_4:-20958388 None:intergenic
TCAATATGTAAATCAATATT+GGG 0.390670 5_4:+20955137 Msa0843280:five_prime_UTR
TATAAATTAATAATAGTTAT+GGG 0.391104 5_4:-20958400 None:intergenic
ACATATTACTCAAAAGAAAA+AGG 0.393443 5_4:-20956317 None:intergenic
TTAACTTATTTGAATACAAA+TGG 0.405652 5_4:-20954556 None:intergenic
CCAAAGTGCAGAGAAAGTTA+AGG 0.408072 5_4:-20948160 None:intergenic
CTTTGAAGTTAATTAAATGT+TGG 0.409614 5_4:+20954865 Msa0843280:five_prime_UTR
ATGACTCTTTGCAGTTTGAT+TGG 0.423275 5_4:+20958158 Msa0843280:intron
TGTAATGGTTGTTTATTCCA+TGG 0.425563 5_4:+20947936 Msa0843280:five_prime_UTR
TTATTGATTAAAATTCATTT+GGG 0.425839 5_4:-20954256 None:intergenic
TCAGCACAGATAATGACTTA+TGG 0.428918 5_4:+20953998 Msa0843280:five_prime_UTR
GATATCACCACTCCAATGAT+TGG 0.431368 5_4:-20955424 None:intergenic
AGTAGCCAAGCCAAAGCAAT+AGG 0.431540 5_4:+20956085 Msa0843280:five_prime_UTR
CCTTAACTTTCTCTGCACTT+TGG 0.436623 5_4:+20948160 Msa0843280:five_prime_UTR
TCTGTTTGCTTGCTCTCATA+GGG 0.441767 5_4:+20948187 Msa0843280:five_prime_UTR
TGGGAACTAAAGCTTGATAT+GGG 0.448002 5_4:+20956504 Msa0843280:exon
AATAAACTAAACAATTTGAA+TGG 0.449800 5_4:-20955529 None:intergenic
GCAGAGAAAGAGAGAGATGG+TGG 0.450004 5_4:+20947789 Msa0843280:five_prime_UTR
ATTAAAGTTGCCATGAAAGA+TGG 0.461241 5_4:+20947901 Msa0843280:five_prime_UTR
GATATAATCATTCCCACAAA+AGG 0.462366 5_4:-20947847 None:intergenic
ATACTCTAGATTACAATTTG+TGG 0.462425 5_4:+20955580 Msa0843280:five_prime_UTR
AATAGGAACTATAGTATCAA+TGG 0.467878 5_4:+20956102 Msa0843280:five_prime_UTR
GATGAATGTATCTTGAAGAT+TGG 0.472697 5_4:-20956160 None:intergenic
TAGTTCCTATTGCTTTGGCT+TGG 0.473979 5_4:-20956090 None:intergenic
ACAAAACAGCATAGAGAGAG+AGG 0.474981 5_4:+20947721 Msa0843280:five_prime_UTR
GGGCAAAGCTTCAGAAGAAA+AGG 0.475399 5_4:+20958220 Msa0843280:CDS
GTAATGGTTGTTTATTCCAT+GGG 0.479195 5_4:+20947937 Msa0843280:five_prime_UTR
ATTTGTTGTCATATTATACA+AGG 0.490744 5_4:+20956132 Msa0843280:five_prime_UTR
CAAAGTGCAGAGAAAGTTAA+GGG 0.497706 5_4:-20948159 None:intergenic
AACAGGCAATAGCTGCAATA+GGG 0.501873 5_4:+20957895 Msa0843280:intron
TTTATTAGATAAAACTCGGA+TGG 0.506084 5_4:+20954192 Msa0843280:intron
AAGCTTCAGAAGAAAAGGTT+GGG 0.506339 5_4:+20958225 Msa0843280:CDS
AATAATAATATGTAATAGAA+GGG 0.514267 5_4:-20955065 None:intergenic
CCTGTTGATAAACAAAGCTA+AGG 0.521025 5_4:-20947983 None:intergenic
TAAATGGAGGCAAAACATCA+AGG 0.525704 5_4:+20955888 Msa0843280:five_prime_UTR
GCAAGTACAAAAGTGAAAGC+TGG 0.527966 5_4:-20954073 None:intergenic
ATTCCAATATCACGACTAAG+AGG 0.530133 5_4:+20955457 Msa0843280:five_prime_UTR
TGTGCTATGTTTAAGCCGAT+CGG 0.531160 5_4:+20957969 Msa0843280:CDS
TTAAACATAGCACAAAATAG+AGG 0.531743 5_4:-20957960 None:intergenic
CTGAAACCTAAAATATGTAG+CGG 0.531994 5_4:-20956374 None:intergenic
CAGAAGAAAAGGTTGGGAAA+GGG 0.532953 5_4:+20958231 Msa0843280:CDS
TAACATATGTACAAAGTTCG+TGG 0.536344 5_4:-20947688 None:intergenic
GTACTAAGTACTATTATATG+AGG 0.543759 5_4:+20954892 Msa0843280:five_prime_UTR
TAAGGGAAGAAGCAAGATGC+TGG 0.545226 5_4:-20947965 None:intergenic
CAGAGAAAGAGAGAGATGGT+GGG 0.548363 5_4:+20947790 Msa0843280:five_prime_UTR
TTGTAACAATGGAACAACAT+TGG 0.549077 5_4:-20958276 None:intergenic
TCACAGATATAAATAAAAGA+TGG 0.552234 5_4:+20954410 Msa0843280:five_prime_UTR
AAGACTATGACTATTACAGC+AGG 0.552572 5_4:-20956411 None:intergenic
ACATGGTGCGTGCAAAGAGC+TGG 0.555731 5_4:+20957936 Msa0843280:CDS
GAAAGAGAGAGATGGTGGGA+TGG 0.556396 5_4:+20947794 Msa0843280:five_prime_UTR
TGAAGCTTTGCCCCATTGCA+CGG 0.560055 5_4:-20958210 None:intergenic
TTGAAGTTAATTAAATGTTG+GGG 0.562622 5_4:+20954867 Msa0843280:five_prime_UTR
AAAGCTTCAGAAGAAAAGGT+TGG 0.563156 5_4:+20958224 Msa0843280:CDS
GGGGCAGAGAAAGAGAGAGA+TGG 0.566526 5_4:+20947786 Msa0843280:five_prime_UTR
GGAACTATAGTATCAATGGC+TGG 0.566753 5_4:+20956106 Msa0843280:five_prime_UTR
TCAGAAGAAAAGGTTGGGAA+AGG 0.566932 5_4:+20958230 Msa0843280:CDS
GGTGCTGTTATAATCGTGGT+AGG 0.568407 5_4:+20958179 Msa0843280:CDS
TCTGAATCCAATCATTGGAG+TGG 0.574334 5_4:+20955417 Msa0843280:five_prime_UTR
GAATGTATCTTGAAGATTGG+TGG 0.575361 5_4:-20956157 None:intergenic
TGAAACCTAAAATATGTAGC+GGG 0.576652 5_4:-20956373 None:intergenic
CAAAACAGCATAGAGAGAGA+GGG 0.578034 5_4:+20947722 Msa0843280:five_prime_UTR
CAAAAGTGAAAGCTGGAATG+AGG 0.578615 5_4:-20954066 None:intergenic
TGGTTAGAGATCAAAGTGCA+TGG 0.579684 5_4:+20956484 Msa0843280:five_prime_UTR
CCACCCCACATCTAAAGACA+AGG 0.580345 5_4:-20954643 None:intergenic
ATTCTTTACTTTCTTCAATG+TGG 0.587667 5_4:+20956254 Msa0843280:five_prime_UTR
CTTGATTCTATGTGATGCCA+TGG 0.589059 5_4:+20955916 Msa0843280:five_prime_UTR
TGGAATGAATAAATATGTAA+TGG 0.590938 5_4:+20947921 Msa0843280:five_prime_UTR
GGGAGTATATGCCTTAATTG+TGG 0.595399 5_4:+20956464 Msa0843280:five_prime_UTR
TTTAGCTCAAAGTGGAAGCA+TGG 0.596575 5_4:+20947873 Msa0843280:five_prime_UTR
CAAGATGCTGGAAAGTCCCA+TGG 0.607920 5_4:-20947953 None:intergenic
TTCGATACTTGTTACAAACA+TGG 0.608790 5_4:+20957919 Msa0843280:CDS
GTGGGATGGCTGAACTTGAA+TGG 0.611210 5_4:+20947808 Msa0843280:five_prime_UTR
TTTGTTGTCATATTATACAA+GGG 0.622068 5_4:+20956133 Msa0843280:five_prime_UTR
GATTGGTGCTGTTATAATCG+TGG 0.634315 5_4:+20958175 Msa0843280:CDS
AAAACAGCATAGAGAGAGAG+GGG 0.638950 5_4:+20947723 Msa0843280:five_prime_UTR
GGTTAGAGATCAAAGTGCAT+GGG 0.639263 5_4:+20956485 Msa0843280:five_prime_UTR
AAGTTAATTAAATGTTGGGG+CGG 0.647467 5_4:+20954870 Msa0843280:five_prime_UTR
CTGTTGATAAACAAAGCTAA+GGG 0.652776 5_4:-20947982 None:intergenic
GCACAGATAATGACTTATGG+TGG 0.656302 5_4:+20954001 Msa0843280:five_prime_UTR
ATTATCATATCACTAGACCA+TGG 0.670480 5_4:-20955933 None:intergenic
AGCATTGCAGATGCAAGAGT+AGG 0.675175 5_4:-20954040 None:intergenic
AGCTCAAAGTGGAAGCATGG+TGG 0.675538 5_4:+20947876 Msa0843280:five_prime_UTR
GGGAACTAAAGCTTGATATG+GGG 0.684135 5_4:+20956505 Msa0843280:exon
ACGGTGAAGATGATTCCGAT+CGG 0.688066 5_4:-20957984 None:intergenic
AGACTATGACTATTACAGCA+GGG 0.696834 5_4:-20956410 None:intergenic
CACCCCACATCTAAAGACAA+GGG 0.714955 5_4:-20954642 None:intergenic
AGTGCAGAGAAAGTTAAGGG+AGG 0.725600 5_4:-20948156 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTATAAATTTA+TGG - chr5_4:20957435-20957454 None:intergenic 0.0%
!! GAATTAATAAAATAAAAAAG+GGG - chr5_4:20948011-20948030 None:intergenic 10.0%
!! GAGAATTAATAAAATAAAAA+AGG - chr5_4:20948013-20948032 None:intergenic 10.0%
!!! GTATAATTTTTAAACTTTAT+TGG + chr5_4:20954115-20954134 Msa0843280:intron 10.0%
!!! TTATTGATTAAAATTCATTT+GGG - chr5_4:20954259-20954278 None:intergenic 10.0%
!!! TTTATTGATTAAAATTCATT+TGG - chr5_4:20954260-20954279 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGAAAAGT+AGG + chr5_4:20954959-20954978 Msa0843280:intron 10.0%
!! AATAATAATATGTAATAGAA+GGG - chr5_4:20955068-20955087 None:intergenic 10.0%
!! TTTATAAATTGTTCAATATT+TGG - chr5_4:20955254-20955273 None:intergenic 10.0%
!! AAAAAAAAATCTCAATTTAA+TGG + chr5_4:20956025-20956044 Msa0843280:five_prime_UTR 10.0%
!!! TTTTTTTGTTTAATTTTCCT+CGG + chr5_4:20948099-20948118 Msa0843280:intron 15.0%
!! TAAAGTTTAAAAATTATACG+AGG - chr5_4:20954114-20954133 None:intergenic 15.0%
!!! AATTTTTAAACTTTATTGGA+AGG + chr5_4:20954119-20954138 Msa0843280:intron 15.0%
!!! TTCTTTTATTAGATAAAACT+CGG + chr5_4:20954188-20954207 Msa0843280:intron 15.0%
!! TTAACTTATTTGAATACAAA+TGG - chr5_4:20954559-20954578 None:intergenic 15.0%
!!! TTTGAAGTTAATTAAATGTT+GGG + chr5_4:20954866-20954885 Msa0843280:five_prime_UTR 15.0%
!! TACATAAAGTGTAAATTATT+AGG - chr5_4:20954928-20954947 None:intergenic 15.0%
!!! TACTCCTTTATATATATTTT+TGG - chr5_4:20955003-20955022 None:intergenic 15.0%
!! GAATAATAATATGTAATAGA+AGG - chr5_4:20955069-20955088 None:intergenic 15.0%
!! TCAATATGTAAATCAATATT+GGG + chr5_4:20955137-20955156 Msa0843280:five_prime_UTR 15.0%
!!! AAAATCATATGAATTGTTTT+TGG - chr5_4:20955283-20955302 None:intergenic 15.0%
!!! CAGAAAAACAAATTTTATAT+TGG - chr5_4:20955401-20955420 None:intergenic 15.0%
!! AATAAACTAAACAATTTGAA+TGG - chr5_4:20955532-20955551 None:intergenic 15.0%
!!! TCTTTGATACTTTATTTAAA+AGG + chr5_4:20955555-20955574 Msa0843280:five_prime_UTR 15.0%
!!! ATTTTTAATAATGATGTATG+AGG - chr5_4:20955704-20955723 None:intergenic 15.0%
!!! ATTATTTTGTGATTTTTGTT+GGG - chr5_4:20955827-20955846 None:intergenic 15.0%
!!! AATTATTTTGTGATTTTTGT+TGG - chr5_4:20955828-20955847 None:intergenic 15.0%
!!! TTTATAAAACTTTTAAATGG+AGG + chr5_4:20955875-20955894 Msa0843280:five_prime_UTR 15.0%
!! TCTATAAACATGAAATTTAT+TGG + chr5_4:20956570-20956589 Msa0843280:intron 15.0%
!! CTATAAACATGAAATTTATT+GGG + chr5_4:20956571-20956590 Msa0843280:intron 15.0%
!!! TTTTTTTTTTGTACACTATT+GGG + chr5_4:20956598-20956617 Msa0843280:intron 15.0%
!!! ATATTATTTGAGCAATTTTT+CGG - chr5_4:20956805-20956824 None:intergenic 15.0%
!! AAAAAAAAATTGATTATGAC+AGG + chr5_4:20956948-20956967 Msa0843280:intron 15.0%
!! TCATAAAAGTTATTACAAAA+TGG + chr5_4:20957535-20957554 Msa0843280:intron 15.0%
!!! AACAAATTATCATTTTTCTT+CGG - chr5_4:20957590-20957609 None:intergenic 15.0%
!! TGGAATGAATAAATATGTAA+TGG + chr5_4:20947921-20947940 Msa0843280:five_prime_UTR 20.0%
!! AATCTCCACTATAATAATAA+TGG + chr5_4:20948362-20948381 Msa0843280:intron 20.0%
!! ATCTCCACTATAATAATAAT+GGG + chr5_4:20948363-20948382 Msa0843280:intron 20.0%
!! TATTCCCATTATTATTATAG+TGG - chr5_4:20948370-20948389 None:intergenic 20.0%
!!! TTTTTCTCATCATATCAAAA+AGG - chr5_4:20951832-20951851 None:intergenic 20.0%
!! AATCTCCACTATAATAATAA+TGG + chr5_4:20948362-20948381 Msa0843280:intron 20.0%
!! ATCTCCACTATAATAATAAT+GGG + chr5_4:20948363-20948382 Msa0843280:intron 20.0%
!! TATTCCCATTATTATTATAG+TGG - chr5_4:20948370-20948389 None:intergenic 20.0%
!! AAAATAGAAATACTAACTGT+GGG - chr5_4:20953659-20953678 None:intergenic 20.0%
!! TAAAATAGAAATACTAACTG+TGG - chr5_4:20953660-20953679 None:intergenic 20.0%
!!! AAATATGATATGTTTTGAGT+GGG - chr5_4:20953778-20953797 None:intergenic 20.0%
!!! TAAATATGATATGTTTTGAG+TGG - chr5_4:20953779-20953798 None:intergenic 20.0%
!!! ATTTTTTGTCACTTACTAAA+AGG - chr5_4:20953853-20953872 None:intergenic 20.0%
!!! GAAATCCATTTTTAAAATGT+GGG - chr5_4:20954220-20954239 None:intergenic 20.0%
!!! TGAAATCCATTTTTAAAATG+TGG - chr5_4:20954221-20954240 None:intergenic 20.0%
!!! ACATTTTAAAAATGGATTTC+AGG + chr5_4:20954220-20954239 Msa0843280:five_prime_UTR 20.0%
!!! AATAATATCCTATTGTTTTC+AGG - chr5_4:20954337-20954356 None:intergenic 20.0%
!!! TATTTGTGAAATGAAGATTT+TGG + chr5_4:20954353-20954372 Msa0843280:five_prime_UTR 20.0%
!! TCACAGATATAAATAAAAGA+TGG + chr5_4:20954410-20954429 Msa0843280:five_prime_UTR 20.0%
!! TGAAAAAAGTTTAGACATAA+TGG - chr5_4:20954521-20954540 None:intergenic 20.0%
!!! CTTTGAAGTTAATTAAATGT+TGG + chr5_4:20954865-20954884 Msa0843280:five_prime_UTR 20.0%
!! TTGAAGTTAATTAAATGTTG+GGG + chr5_4:20954867-20954886 Msa0843280:five_prime_UTR 20.0%
!!! CCTTTATATATATTTTTGGT+AGG - chr5_4:20954999-20955018 None:intergenic 20.0%
!! CCTACCAAAAATATATATAA+AGG + chr5_4:20954996-20955015 Msa0843280:intron 20.0%
!! CTCAATATGTAAATCAATAT+TGG + chr5_4:20955136-20955155 Msa0843280:five_prime_UTR 20.0%
!! AAAAAAAACTCATAAAAGCA+AGG - chr5_4:20955180-20955199 None:intergenic 20.0%
!! CACAAAAAAAAATGTTAATC+TGG - chr5_4:20955332-20955351 None:intergenic 20.0%
!!! CAGATTAACATTTTTTTTTG+TGG + chr5_4:20955330-20955349 Msa0843280:five_prime_UTR 20.0%
!! AGAGACATCATTATTAAATT+TGG + chr5_4:20955676-20955695 Msa0843280:five_prime_UTR 20.0%
!! GAATTATCTCAAAAATTGTT+GGG - chr5_4:20955736-20955755 None:intergenic 20.0%
!! AGAATTATCTCAAAAATTGT+TGG - chr5_4:20955737-20955756 None:intergenic 20.0%
!! CTCAATTTAATGGTTAAATT+AGG + chr5_4:20956035-20956054 Msa0843280:five_prime_UTR 20.0%
!! TTAGGATTGAAAGAATATAT+TGG + chr5_4:20956053-20956072 Msa0843280:five_prime_UTR 20.0%
!!! ATTTGTTGTCATATTATACA+AGG + chr5_4:20956132-20956151 Msa0843280:five_prime_UTR 20.0%
!!! TTTGTTGTCATATTATACAA+GGG + chr5_4:20956133-20956152 Msa0843280:five_prime_UTR 20.0%
!!! AATTTTCACCAAATTTGAAT+TGG + chr5_4:20956203-20956222 Msa0843280:five_prime_UTR 20.0%
!!! TACACTTTTTACCATAATAT+GGG + chr5_4:20956293-20956312 Msa0843280:five_prime_UTR 20.0%
!! ACATATTACTCAAAAGAAAA+AGG - chr5_4:20956320-20956339 None:intergenic 20.0%
!!! GTAATATGTTTTTTACCATA+AGG + chr5_4:20956331-20956350 Msa0843280:five_prime_UTR 20.0%
!! CCAAAAATTAATTTACCTTA+TGG - chr5_4:20956349-20956368 None:intergenic 20.0%
!!! CCATAAGGTAAATTAATTTT+TGG + chr5_4:20956346-20956365 Msa0843280:five_prime_UTR 20.0%
!!! CTTTTTTATCACAATTCAAA+CGG + chr5_4:20956443-20956462 Msa0843280:five_prime_UTR 20.0%
!!! TTTTTTATCACAATTCAAAC+GGG + chr5_4:20956444-20956463 Msa0843280:five_prime_UTR 20.0%
!! ATAATAAATGAATGATTACC+TGG - chr5_4:20956548-20956567 None:intergenic 20.0%
!!! GTTTTTTTTTTGTACACTAT+TGG + chr5_4:20956597-20956616 Msa0843280:intron 20.0%
!!! TTTTCTCTCTTTATTGTTTT+AGG + chr5_4:20956722-20956741 Msa0843280:intron 20.0%
!!! TAAGCAAATTTTGACTTTTT+AGG + chr5_4:20957054-20957073 Msa0843280:intron 20.0%
!! AATAAAAATCATTCAACTTG+TGG + chr5_4:20957221-20957240 Msa0843280:intron 20.0%
!!! TCATAAATCATTATTTTCTG+TGG - chr5_4:20957281-20957300 None:intergenic 20.0%
!! AAAATGTAAGCTTAATAATG+TGG - chr5_4:20957352-20957371 None:intergenic 20.0%
!!! TATACTTTGTTTTGTAACAA+TGG - chr5_4:20958290-20958309 None:intergenic 20.0%
!! AAGCAAATTATTACCTTTTG+TGG + chr5_4:20947834-20947853 Msa0843280:five_prime_UTR 25.0%
!! AGCAAATTATTACCTTTTGT+GGG + chr5_4:20947835-20947854 Msa0843280:five_prime_UTR 25.0%
! TTTATTCATTCCATCTTTCA+TGG - chr5_4:20947914-20947933 None:intergenic 25.0%
!! TATTATAGTGGAGATTTAAG+AGG - chr5_4:20948358-20948377 None:intergenic 25.0%
!! AAACTATCCTTTGATTAGTT+TGG + chr5_4:20948784-20948803 Msa0843280:intron 25.0%
!!! AACTATCCTTTGATTAGTTT+GGG + chr5_4:20948785-20948804 Msa0843280:intron 25.0%
! AAAATTCATACCAATGACAA+TGG - chr5_4:20948886-20948905 None:intergenic 25.0%
!!! ATATTTGATTACTTTTGCAG+GGG - chr5_4:20949187-20949206 None:intergenic 25.0%
!!! GATATTTGATTACTTTTGCA+GGG - chr5_4:20949188-20949207 None:intergenic 25.0%
! TGCAAAAGTAATCAAATATC+CGG + chr5_4:20949188-20949207 Msa0843280:intron 25.0%
!! AACATACAACAAAAGTATGA+TGG + chr5_4:20949764-20949783 Msa0843280:intron 25.0%
! TTTGTGAAGAACTATGAAAA+TGG - chr5_4:20949795-20949814 None:intergenic 25.0%
!!! TTTTGAAGAAATATTCTCAC+CGG - chr5_4:20950102-20950121 None:intergenic 25.0%
! TGAATATGTAAATTTCACTG+AGG - chr5_4:20950372-20950391 None:intergenic 25.0%
!! AAAACTTCCCAAATCATTTT+GGG - chr5_4:20950957-20950976 None:intergenic 25.0%
! AAATGTTTAAGAACAGACAA+TGG - chr5_4:20951130-20951149 None:intergenic 25.0%
! ATGAGAAAAATTCTTCATGA+GGG + chr5_4:20951842-20951861 Msa0843280:intron 25.0%
!! AAACTAAGTTGTTATTACTG+TGG - chr5_4:20952093-20952112 None:intergenic 25.0%
!! AACTTCGATCAATGTATTTT+CGG + chr5_4:20952583-20952602 Msa0843280:intron 25.0%
!! AAGAAATATCTTTTCTGATG+TGG + chr5_4:20952997-20953016 Msa0843280:intron 25.0%
!! TATTATAGTGGAGATTTAAG+AGG - chr5_4:20948358-20948377 None:intergenic 25.0%
! AAATAGAAATACTAACTGTG+GGG - chr5_4:20953658-20953677 None:intergenic 25.0%
! AATGATTTAATCCAAGAGAA+AGG - chr5_4:20953963-20953982 None:intergenic 25.0%
!! TTATTGGAAGGTGAATTTTA+TGG + chr5_4:20954131-20954150 Msa0843280:intron 25.0%
! TTTATTAGATAAAACTCGGA+TGG + chr5_4:20954192-20954211 Msa0843280:intron 25.0%
!! AAAATGGATTTCAGGTAAAA+TGG + chr5_4:20954228-20954247 Msa0843280:five_prime_UTR 25.0%
!! AAATTTTTGTATCACCTCTA+AGG - chr5_4:20954828-20954847 None:intergenic 25.0%
! CTTCAAAGTTCAACTATTAT+TGG - chr5_4:20954853-20954872 None:intergenic 25.0%
! GTACTAAGTACTATTATATG+AGG + chr5_4:20954892-20954911 Msa0843280:five_prime_UTR 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - chr5_4:20955170-20955189 None:intergenic 25.0%
! GTTAATCTGGTTAAAAAAGA+GGG - chr5_4:20955319-20955338 None:intergenic 25.0%
! TGTTAATCTGGTTAAAAAAG+AGG - chr5_4:20955320-20955339 None:intergenic 25.0%
!!! TTTTTGTGGTTTTATATGCA+TGG + chr5_4:20955344-20955363 Msa0843280:five_prime_UTR 25.0%
! ATACTCTAGATTACAATTTG+TGG + chr5_4:20955580-20955599 Msa0843280:five_prime_UTR 25.0%
! TAAAAAGAGAGAAAAGAAGA+AGG + chr5_4:20955797-20955816 Msa0843280:five_prime_UTR 25.0%
! AATAGGAACTATAGTATCAA+TGG + chr5_4:20956102-20956121 Msa0843280:five_prime_UTR 25.0%
!! ACCAAATTTGAATTGGATTT+TGG + chr5_4:20956210-20956229 Msa0843280:five_prime_UTR 25.0%
!! CCAAATTTGAATTGGATTTT+GGG + chr5_4:20956211-20956230 Msa0843280:five_prime_UTR 25.0%
! ATTCTTTACTTTCTTCAATG+TGG + chr5_4:20956254-20956273 Msa0843280:five_prime_UTR 25.0%
!! CATATTATGGTAAAAAGTGT+AGG - chr5_4:20956294-20956313 None:intergenic 25.0%
!!! CTACACTTTTTACCATAATA+TGG + chr5_4:20956292-20956311 Msa0843280:five_prime_UTR 25.0%
! GAATTGTGATAAAAAAGACT+TGG - chr5_4:20956440-20956459 None:intergenic 25.0%
! AAACATGAAATTTATTGGGT+AGG + chr5_4:20956575-20956594 Msa0843280:intron 25.0%
! TGTTTAGTAGTTTGAAAAAG+AGG - chr5_4:20956829-20956848 None:intergenic 25.0%
! CTACTAAACAAAATGTAACA+CGG + chr5_4:20956839-20956858 Msa0843280:intron 25.0%
!!! TATTTAGAGAGAATTTGTTG+AGG + chr5_4:20956880-20956899 Msa0843280:intron 25.0%
!!! ATTTAGAGAGAATTTGTTGA+GGG + chr5_4:20956881-20956900 Msa0843280:intron 25.0%
! TATGATATATACTTGTAGAG+AGG + chr5_4:20956906-20956925 Msa0843280:intron 25.0%
! ATGATATATACTTGTAGAGA+GGG + chr5_4:20956907-20956926 Msa0843280:intron 25.0%
! AATTGATTATGACAGGAATT+TGG + chr5_4:20956955-20956974 Msa0843280:intron 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - chr5_4:20957153-20957172 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG + chr5_4:20957079-20957098 Msa0843280:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5_4:20957079-20957098 None:intergenic 25.0%
! TGTTAATAGGGATATATAAG+AGG - chr5_4:20957879-20957898 None:intergenic 25.0%
! TCTTATATATCCCTATTAAC+AGG + chr5_4:20957878-20957897 Msa0843280:intron 25.0%
! TTAAACATAGCACAAAATAG+AGG - chr5_4:20957963-20957982 None:intergenic 25.0%
! AAAAATTGAACCCAAGAAAA+CGG - chr5_4:20958006-20958025 None:intergenic 25.0%
TAACATATGTACAAAGTTCG+TGG - chr5_4:20947691-20947710 None:intergenic 30.0%
GATATAATCATTCCCACAAA+AGG - chr5_4:20947850-20947869 None:intergenic 30.0%
!!! ATATCTGTTTTAGCTCAAAG+TGG + chr5_4:20947865-20947884 Msa0843280:five_prime_UTR 30.0%
ATTAAAGTTGCCATGAAAGA+TGG + chr5_4:20947901-20947920 Msa0843280:five_prime_UTR 30.0%
TGTAATGGTTGTTTATTCCA+TGG + chr5_4:20947936-20947955 Msa0843280:five_prime_UTR 30.0%
GTAATGGTTGTTTATTCCAT+GGG + chr5_4:20947937-20947956 Msa0843280:five_prime_UTR 30.0%
! CTGTTGATAAACAAAGCTAA+GGG - chr5_4:20947985-20948004 None:intergenic 30.0%
TGCCAATAAAAGAAGAGAAA+AGG - chr5_4:20948125-20948144 None:intergenic 30.0%
! TTTTCTCTTCTTTTATTGGC+AGG + chr5_4:20948124-20948143 Msa0843280:intron 30.0%
TTTACTTACTCACATTGAGA+AGG - chr5_4:20948317-20948336 None:intergenic 30.0%
ATGTGAGTAAGTAAAAACCA+CGG + chr5_4:20948322-20948341 Msa0843280:intron 30.0%
TAGATACAACTCTCACAAAT+TGG + chr5_4:20948434-20948453 Msa0843280:intron 30.0%
!! ACTATCCTTTGATTAGTTTG+GGG + chr5_4:20948786-20948805 Msa0843280:intron 30.0%
! CAAAACTCTATCTTCTCTTT+TGG + chr5_4:20948835-20948854 Msa0843280:intron 30.0%
GAACATAACTTTCTTGATTC+TGG + chr5_4:20949034-20949053 Msa0843280:intron 30.0%
!! TATTTGATTACTTTTGCAGG+GGG - chr5_4:20949186-20949205 None:intergenic 30.0%
!! GGATATTTGATTACTTTTGC+AGG - chr5_4:20949189-20949208 None:intergenic 30.0%
! TTTTCTTGAATCTACATCTC+CGG + chr5_4:20949218-20949237 Msa0843280:intron 30.0%
ATCTCAAGAAAGTTCTTGAA+AGG - chr5_4:20949578-20949597 None:intergenic 30.0%
!! TCTTTTGCTATGAAGGATTT+GGG - chr5_4:20949678-20949697 None:intergenic 30.0%
!! ATCTTTTGCTATGAAGGATT+TGG - chr5_4:20949679-20949698 None:intergenic 30.0%
GTTAAAACAGCATTCTTACA+TGG - chr5_4:20950005-20950024 None:intergenic 30.0%
AAAATTACCAGATGGAAAGA+GGG - chr5_4:20950234-20950253 None:intergenic 30.0%
TAAAATTACCAGATGGAAAG+AGG - chr5_4:20950235-20950254 None:intergenic 30.0%
AGACAACCAATAAGGAAAAA+TGG - chr5_4:20950316-20950335 None:intergenic 30.0%
TATGTAAATTTCACTGAGGA+AGG - chr5_4:20950368-20950387 None:intergenic 30.0%
!!! CTTCATGTATTGGTTGATTT+TGG + chr5_4:20950504-20950523 Msa0843280:intron 30.0%
TCACGATCATAATTCATTTG+AGG + chr5_4:20950572-20950591 Msa0843280:intron 30.0%
TATTGTGGTAAACAATTCAG+GGG - chr5_4:20950606-20950625 None:intergenic 30.0%
CTATTGTGGTAAACAATTCA+GGG - chr5_4:20950607-20950626 None:intergenic 30.0%
ACTATTGTGGTAAACAATTC+AGG - chr5_4:20950608-20950627 None:intergenic 30.0%
TTGTTTACCACAATAGTCTT+TGG + chr5_4:20950611-20950630 Msa0843280:intron 30.0%
!! TGAACTTGGCTTTAGATTAT+GGG - chr5_4:20950720-20950739 None:intergenic 30.0%
!! ATGAACTTGGCTTTAGATTA+TGG - chr5_4:20950721-20950740 None:intergenic 30.0%
TTTCCATACCATACTTCATT+TGG + chr5_4:20950863-20950882 Msa0843280:intron 30.0%
ATACCAAATGAAGTATGGTA+TGG - chr5_4:20950869-20950888 None:intergenic 30.0%
TTTGGTATCTCTCCATTTAA+AGG + chr5_4:20950881-20950900 Msa0843280:intron 30.0%
! AAACTTCCCAAATCATTTTG+GGG - chr5_4:20950956-20950975 None:intergenic 30.0%
! CAAAACTTCCCAAATCATTT+TGG - chr5_4:20950958-20950977 None:intergenic 30.0%
TATTCCATGAGATCTACAAT+AGG + chr5_4:20951078-20951097 Msa0843280:intron 30.0%
!! CAGAGTATCTTTTCAAAGAT+CGG - chr5_4:20951368-20951387 None:intergenic 30.0%
AATCATCTTCCAAACATCAA+GGG - chr5_4:20951436-20951455 None:intergenic 30.0%
GTTGGTATGATAAACCAATT+TGG - chr5_4:20951646-20951665 None:intergenic 30.0%
TCATATCAAAAAGGAGACTT+TGG - chr5_4:20951823-20951842 None:intergenic 30.0%
GATGAGAAAAATTCTTCATG+AGG + chr5_4:20951841-20951860 Msa0843280:intron 30.0%
TGAGAAAAATTCTTCATGAG+GGG + chr5_4:20951843-20951862 Msa0843280:intron 30.0%
TTCTTTGGATCGATTATATC+AGG + chr5_4:20952000-20952019 Msa0843280:intron 30.0%
CTGATTTACAATACCTTTGA+AGG + chr5_4:20952401-20952420 Msa0843280:intron 30.0%
! TTTTCTCGGGTTTATCTTTT+TGG + chr5_4:20952655-20952674 Msa0843280:intron 30.0%
! TTTCTCGGGTTTATCTTTTT+GGG + chr5_4:20952656-20952675 Msa0843280:intron 30.0%
TAGTGATATATTGCATGTCT+AGG - chr5_4:20952956-20952975 None:intergenic 30.0%
ATAATTCTTAGTATGCTCTG+TGG - chr5_4:20953043-20953062 None:intergenic 30.0%
TTTACTTACTCACATTGAGA+AGG - chr5_4:20948317-20948336 None:intergenic 30.0%
ATGTGAGTAAGTAAAAACCA+CGG + chr5_4:20948322-20948341 Msa0843280:intron 30.0%
TAGATACAACTCTCACAAAT+TGG + chr5_4:20948434-20948453 Msa0843280:intron 30.0%
!! TGGATCCCACATTTTAAAAA+TGG + chr5_4:20954212-20954231 Msa0843280:five_prime_UTR 30.0%
TTGTCTTACCTGAAAACAAT+AGG + chr5_4:20954326-20954345 Msa0843280:five_prime_UTR 30.0%
!!! AAGATTTTGGAGCATATCAT+CGG + chr5_4:20954366-20954385 Msa0843280:five_prime_UTR 30.0%
AAGTTAATTAAATGTTGGGG+CGG + chr5_4:20954870-20954889 Msa0843280:five_prime_UTR 30.0%
! GTTTTTCTGAATCCAATCAT+TGG + chr5_4:20955412-20955431 Msa0843280:five_prime_UTR 30.0%
ATTATCATATCACTAGACCA+TGG - chr5_4:20955936-20955955 None:intergenic 30.0%
TACTATAGTTCCTATTGCTT+TGG - chr5_4:20956098-20956117 None:intergenic 30.0%
GATGAATGTATCTTGAAGAT+TGG - chr5_4:20956163-20956182 None:intergenic 30.0%
CCCAAAATCCAATTCAAATT+TGG - chr5_4:20956214-20956233 None:intergenic 30.0%
! AATTTGAATTGGATTTTGGG+AGG + chr5_4:20956214-20956233 Msa0843280:five_prime_UTR 30.0%
!! ATTTGAATTGGATTTTGGGA+GGG + chr5_4:20956215-20956234 Msa0843280:five_prime_UTR 30.0%
TTCAATGTGGTACATATATC+AGG + chr5_4:20956267-20956286 Msa0843280:five_prime_UTR 30.0%
AAGAAAAAGGTCCCATATTA+TGG - chr5_4:20956307-20956326 None:intergenic 30.0%
TGAAACCTAAAATATGTAGC+GGG - chr5_4:20956376-20956395 None:intergenic 30.0%
CTGAAACCTAAAATATGTAG+CGG - chr5_4:20956377-20956396 None:intergenic 30.0%
TTGATCTCTAACCACAATTA+AGG - chr5_4:20956478-20956497 None:intergenic 30.0%
!!! GTTGATTGTCATTTTATACC+AGG + chr5_4:20956527-20956546 Msa0843280:CDS 30.0%
!!! TTTTTTGTACACTATTGGGA+TGG + chr5_4:20956602-20956621 Msa0843280:intron 30.0%
!! TTTAGAGAGAATTTGTTGAG+GGG + chr5_4:20956882-20956901 Msa0843280:intron 30.0%
TGATATATACTTGTAGAGAG+GGG + chr5_4:20956908-20956927 Msa0843280:intron 30.0%
ATATTAAGATATACTCCCTC+CGG + chr5_4:20957022-20957041 Msa0843280:intron 30.0%
! CCTTATAACTAATGGACAAA+TGG - chr5_4:20957311-20957330 None:intergenic 30.0%
CCATTTGTCCATTAGTTATA+AGG + chr5_4:20957308-20957327 Msa0843280:intron 30.0%
TTAAAAAATAGTACGGTACG+AGG - chr5_4:20957740-20957759 None:intergenic 30.0%
! TTCGATACTTGTTACAAACA+TGG + chr5_4:20957919-20957938 Msa0843280:CDS 30.0%
! TTCTTGGGTTCAATTTTTCT+AGG + chr5_4:20958008-20958027 Msa0843280:CDS 30.0%
TTGTAACAATGGAACAACAT+TGG - chr5_4:20958279-20958298 None:intergenic 30.0%
ATAGTTATGGGTTCTTGTTA+AGG - chr5_4:20958391-20958410 None:intergenic 30.0%
! CCTGTTGATAAACAAAGCTA+AGG - chr5_4:20947986-20948005 None:intergenic 35.0%
!! CCTTAGCTTTGTTTATCAAC+AGG + chr5_4:20947983-20948002 Msa0843280:five_prime_UTR 35.0%
! GGCCTTTTCTCTTCTTTTAT+TGG + chr5_4:20948120-20948139 Msa0843280:intron 35.0%
CAAAGTGCAGAGAAAGTTAA+GGG - chr5_4:20948162-20948181 None:intergenic 35.0%
!!! AAGTGCCTATTTTGAGTTCA+CGG - chr5_4:20948248-20948267 None:intergenic 35.0%
ACTCAAAATAGGCACTTTAG+CGG + chr5_4:20948251-20948270 Msa0843280:intron 35.0%
!!! CACACAACAAATTTTTAGCG+TGG + chr5_4:20948287-20948306 Msa0843280:intron 35.0%
TGTGAGTAAGTAAAAACCAC+GGG + chr5_4:20948323-20948342 Msa0843280:intron 35.0%
! TTTTTCCTCACACTCTTATG+AGG + chr5_4:20948467-20948486 Msa0843280:intron 35.0%
!! TACCGTGTGCTATTTATAGA+AGG + chr5_4:20948601-20948620 Msa0843280:intron 35.0%
!! ACCGTGTGCTATTTATAGAA+GGG + chr5_4:20948602-20948621 Msa0843280:intron 35.0%
TCCCTTCTATAAATAGCACA+CGG - chr5_4:20948606-20948625 None:intergenic 35.0%
TTTCTTCTTCCTTCTTCACA+TGG + chr5_4:20948697-20948716 Msa0843280:intron 35.0%
GGCTGAAAAGAATTCAACAT+TGG + chr5_4:20948726-20948745 Msa0843280:intron 35.0%
GAAAAGAATTCAACATTGGC+TGG + chr5_4:20948730-20948749 Msa0843280:intron 35.0%
ATCAAAGGATAGTTTCCCTT+TGG - chr5_4:20948779-20948798 None:intergenic 35.0%
AGTAATCAAATATCCGGATG+TGG + chr5_4:20949194-20949213 Msa0843280:intron 35.0%
GATTCAAGAAAATCCACATC+CGG - chr5_4:20949210-20949229 None:intergenic 35.0%
TGGTTATGTAGATGCTGATA+TGG - chr5_4:20949244-20949263 None:intergenic 35.0%
!!! AAGTGCTTATGTTTTGGCAA+TGG - chr5_4:20949282-20949301 None:intergenic 35.0%
! GCCAAAACATAAGCACTTTT+TGG + chr5_4:20949284-20949303 Msa0843280:intron 35.0%
!!! GCCAAAAAGTGCTTATGTTT+TGG - chr5_4:20949288-20949307 None:intergenic 35.0%
! TGGATACTGAGGTATCTAAA+AGG - chr5_4:20949315-20949334 None:intergenic 35.0%
TTACTGAGTTTCATATGACC+AGG + chr5_4:20949513-20949532 Msa0843280:intron 35.0%
ATCGTTCAAAAAGAATGCTG+TGG - chr5_4:20949617-20949636 None:intergenic 35.0%
!! GAGCAAATCTTTTGCTATGA+AGG - chr5_4:20949685-20949704 None:intergenic 35.0%
GCTTATCGTTGGAAAAGATA+AGG - chr5_4:20949736-20949755 None:intergenic 35.0%
!! GTTGATGATATGCTTATCGT+TGG - chr5_4:20949747-20949766 None:intergenic 35.0%
AACTTCTTGTACCATTGTCT+TGG + chr5_4:20949870-20949889 Msa0843280:intron 35.0%
CGCTTGAAGAAAAGTCTATA+CGG - chr5_4:20949909-20949928 None:intergenic 35.0%
CCTAGAGGAAGAAATCTATA+TGG - chr5_4:20949979-20949998 None:intergenic 35.0%
CCATATAGATTTCTTCCTCT+AGG + chr5_4:20949976-20949995 Msa0843280:intron 35.0%
! AATCAACGCCTTTCTTTTGA+TGG + chr5_4:20950120-20950139 Msa0843280:intron 35.0%
ACAATTCGTGCTTTGTATCT+GGG + chr5_4:20950155-20950174 Msa0843280:intron 35.0%
!! GAGGGCATTGAAAAATAAGT+GGG - chr5_4:20950216-20950235 None:intergenic 35.0%
!! AGAGGGCATTGAAAAATAAG+TGG - chr5_4:20950217-20950236 None:intergenic 35.0%
! TTCCATCTGGTAATTTTACC+AGG + chr5_4:20950237-20950256 Msa0843280:intron 35.0%
CCAATAAGGAAAAATGGTTG+CGG - chr5_4:20950310-20950329 None:intergenic 35.0%
! TTCCTTATTGGTTGTCTCTA+TGG + chr5_4:20950319-20950338 Msa0843280:intron 35.0%
CCATCAAAAAGATACTTCTC+AGG - chr5_4:20950395-20950414 None:intergenic 35.0%
!!! CCTGAGAAGTATCTTTTTGA+TGG + chr5_4:20950392-20950411 Msa0843280:intron 35.0%
! GATGATGATGATGTTGAGAT+GGG - chr5_4:20950458-20950477 None:intergenic 35.0%
! TGATGATGATGATGTTGAGA+TGG - chr5_4:20950459-20950478 None:intergenic 35.0%
ACCAATACATGAAGAACAGA+TGG - chr5_4:20950498-20950517 None:intergenic 35.0%
!! TGATTTTGGTCTATCTGATC+AGG + chr5_4:20950518-20950537 Msa0843280:intron 35.0%
ATTGTGGTAAACAATTCAGG+GGG - chr5_4:20950605-20950624 None:intergenic 35.0%
TAAGAAGCCAAAGACTATTG+TGG - chr5_4:20950621-20950640 None:intergenic 35.0%
! CTAAAGCCAAGTTCATCTTT+TGG + chr5_4:20950725-20950744 Msa0843280:intron 35.0%
AAAGCTAGATGCTAAGATGA+AGG - chr5_4:20950771-20950790 None:intergenic 35.0%
! AGCTTTGCTCTTTCATCTTT+TGG + chr5_4:20950785-20950804 Msa0843280:intron 35.0%
TATGGTCATTTGAGAGTCTT+TGG - chr5_4:20950833-20950852 None:intergenic 35.0%
AAAGACTCTCAAATGACCAT+AGG + chr5_4:20950832-20950851 Msa0843280:intron 35.0%
GAGAGATACCAAATGAAGTA+TGG - chr5_4:20950874-20950893 None:intergenic 35.0%
TCTCCATTTAAAGGTCTTGA+AGG + chr5_4:20950890-20950909 Msa0843280:intron 35.0%
ACTCCTTCAAGACCTTTAAA+TGG - chr5_4:20950896-20950915 None:intergenic 35.0%
TGACTTTCTCTACAATCGTT+CGG + chr5_4:20950996-20951015 Msa0843280:intron 35.0%
ATCTACAATAGGCTGCAAAT+GGG + chr5_4:20951089-20951108 Msa0843280:intron 35.0%
TGTTTAAGAACAGACAATGG+TGG - chr5_4:20951127-20951146 None:intergenic 35.0%
!! TCAAGTTCTTCAGGTTTTCA+AGG - chr5_4:20951194-20951213 None:intergenic 35.0%
ACTTGATCTTTCGTCTTCAA+TGG + chr5_4:20951208-20951227 Msa0843280:intron 35.0%
! CGATCACTCTAGAAAAGTAT+GGG - chr5_4:20951239-20951258 None:intergenic 35.0%
! ACGATCACTCTAGAAAAGTA+TGG - chr5_4:20951240-20951259 None:intergenic 35.0%
ATGTTTGCTCTACATCTGAA+AGG - chr5_4:20951300-20951319 None:intergenic 35.0%
CATCTGAATGAACAAGATCT+AGG + chr5_4:20951317-20951336 Msa0843280:intron 35.0%
GAATCATCTTCCAAACATCA+AGG - chr5_4:20951437-20951456 None:intergenic 35.0%
ATGCAGGGAAAGATAAACAA+GGG - chr5_4:20951550-20951569 None:intergenic 35.0%
TATGCAGGGAAAGATAAACA+AGG - chr5_4:20951551-20951570 None:intergenic 35.0%
! ATGATAAACCAATTTGGAGC+TGG - chr5_4:20951640-20951659 None:intergenic 35.0%
ACAGGAAAGTTAGATGATGT+TGG - chr5_4:20951664-20951683 None:intergenic 35.0%
CTAACTTTCCTGTTGAGATA+AGG + chr5_4:20951671-20951690 Msa0843280:intron 35.0%
! GTGATTCTGGTTACAGATAA+TGG - chr5_4:20951748-20951767 None:intergenic 35.0%
TCAAAAAGGAGACTTTGGTA+TGG - chr5_4:20951818-20951837 None:intergenic 35.0%
! TGCATTTGGATAATTGACTC+AGG - chr5_4:20951886-20951905 None:intergenic 35.0%
AACGACAAAGAAATTCTCGT+TGG + chr5_4:20951942-20951961 Msa0843280:intron 35.0%
GTTCCATCTTCTTTCTTCTT+TGG + chr5_4:20951985-20952004 Msa0843280:intron 35.0%
GATCCAAAGAAGAAAGAAGA+TGG - chr5_4:20951991-20952010 None:intergenic 35.0%
TTGGATCGATTATATCAGGA+TGG + chr5_4:20952004-20952023 Msa0843280:intron 35.0%
ATCTGCACTCAAACTTTCTA+TGG + chr5_4:20952058-20952077 Msa0843280:intron 35.0%
TGTTATTACTGTGGCAAACT+GGG - chr5_4:20952084-20952103 None:intergenic 35.0%
! TTGTTATTACTGTGGCAAAC+TGG - chr5_4:20952085-20952104 None:intergenic 35.0%
GAGCATCTAAATACCTTCAA+AGG - chr5_4:20952417-20952436 None:intergenic 35.0%
!! AACAAGGTGTGCTTTATTTC+TGG + chr5_4:20952482-20952501 Msa0843280:intron 35.0%
!! ACAAGGTGTGCTTTATTTCT+GGG + chr5_4:20952483-20952502 Msa0843280:intron 35.0%
ATACCAATGCGTATGAGTTA+TGG - chr5_4:20952542-20952561 None:intergenic 35.0%
!!! GGTTTATCTTTTTGGGTGAT+TGG + chr5_4:20952663-20952682 Msa0843280:intron 35.0%
TGGTGATATGTTCAAGCTAA+CGG - chr5_4:20952754-20952773 None:intergenic 35.0%
ATTTCCTGTGTAACTCAAGA+TGG - chr5_4:20952796-20952815 None:intergenic 35.0%
TTGTCGCTAGATATAAAGTG+AGG - chr5_4:20952979-20952998 None:intergenic 35.0%
!!! AAGTGCCTATTTTGAGTTCA+CGG - chr5_4:20948248-20948267 None:intergenic 35.0%
ACTCAAAATAGGCACTTTAG+CGG + chr5_4:20948251-20948270 Msa0843280:intron 35.0%
!!! CACACAACAAATTTTTAGCG+TGG + chr5_4:20948287-20948306 Msa0843280:intron 35.0%
TGTGAGTAAGTAAAAACCAC+GGG + chr5_4:20948323-20948342 Msa0843280:intron 35.0%
! TTTTTCCTCACACTCTTATG+AGG + chr5_4:20948467-20948486 Msa0843280:intron 35.0%
!! TACCGTGTGCTATTTATAGA+AGG + chr5_4:20948601-20948620 Msa0843280:intron 35.0%
!! ACCGTGTGCTATTTATAGAA+GGG + chr5_4:20948602-20948621 Msa0843280:intron 35.0%
TCCCTTCTATAAATAGCACA+CGG - chr5_4:20948606-20948625 None:intergenic 35.0%
TTTCTTCTTCCTTCTTCACA+TGG + chr5_4:20948697-20948716 Msa0843280:intron 35.0%
GGCTGAAAAGAATTCAACAT+TGG + chr5_4:20948726-20948745 Msa0843280:intron 35.0%
GAAAAGAATTCAACATTGGC+TGG + chr5_4:20948730-20948749 Msa0843280:intron 35.0%
!! TATGATATGTTTTGAGTGGG+TGG - chr5_4:20953775-20953794 None:intergenic 35.0%
GAATAATGACCTTTACCTCA+GGG - chr5_4:20953831-20953850 None:intergenic 35.0%
TTCCAAAACTTCCTTTCTCT+TGG + chr5_4:20953949-20953968 Msa0843280:intron 35.0%
! ATCCAAGAGAAAGGAAGTTT+TGG - chr5_4:20953954-20953973 None:intergenic 35.0%
TCAGCACAGATAATGACTTA+TGG + chr5_4:20953998-20954017 Msa0843280:five_prime_UTR 35.0%
!!! TTGTACTTGCACTGATTTTC+AGG + chr5_4:20954086-20954105 Msa0843280:five_prime_UTR 35.0%
ATACCCTTGTCTTTAGATGT+GGG + chr5_4:20954639-20954658 Msa0843280:intron 35.0%
GTATGGGTGACATTAAATCT+GGG - chr5_4:20954724-20954743 None:intergenic 35.0%
TGTATGGGTGACATTAAATC+TGG - chr5_4:20954725-20954744 None:intergenic 35.0%
ATTAAATCTGAGCCACACAA+TGG - chr5_4:20954773-20954792 None:intergenic 35.0%
ACTTCAGTGACATAATGTCA+CGG - chr5_4:20954800-20954819 None:intergenic 35.0%
! CACTGAAGTATTATCCTTAG+AGG + chr5_4:20954811-20954830 Msa0843280:intron 35.0%
CTTAGTCGTGATATTGGAAT+TGG - chr5_4:20955457-20955476 None:intergenic 35.0%
ATTCCAATATCACGACTAAG+AGG + chr5_4:20955457-20955476 Msa0843280:five_prime_UTR 35.0%
ATTCCTCTTAGTCGTGATAT+TGG - chr5_4:20955463-20955482 None:intergenic 35.0%
TAAATGGAGGCAAAACATCA+AGG + chr5_4:20955888-20955907 Msa0843280:five_prime_UTR 35.0%
GAATGTATCTTGAAGATTGG+TGG - chr5_4:20956160-20956179 None:intergenic 35.0%
! GTTTTCCCGCTACATATTTT+AGG + chr5_4:20956368-20956387 Msa0843280:five_prime_UTR 35.0%
AGACTATGACTATTACAGCA+GGG - chr5_4:20956413-20956432 None:intergenic 35.0%
AAGACTATGACTATTACAGC+AGG - chr5_4:20956414-20956433 None:intergenic 35.0%
ATGGGAACTAAAGCTTGATA+TGG + chr5_4:20956503-20956522 Msa0843280:exon 35.0%
TGGGAACTAAAGCTTGATAT+GGG + chr5_4:20956504-20956523 Msa0843280:exon 35.0%
! AACACGGTAGTATCTTTTTG+TGG + chr5_4:20956855-20956874 Msa0843280:intron 35.0%
TTGCTTATAATAGTGACCAG+AGG + chr5_4:20957156-20957175 Msa0843280:intron 35.0%
TGCTTATAATAGTGACCAGA+GGG + chr5_4:20957157-20957176 Msa0843280:intron 35.0%
TTATGTGTGCCAAGATAAGA+GGG - chr5_4:20957251-20957270 None:intergenic 35.0%
TTTATGTGTGCCAAGATAAG+AGG - chr5_4:20957252-20957271 None:intergenic 35.0%
TGTCCATTAGTTATAAGGAC+CGG + chr5_4:20957313-20957332 Msa0843280:intron 35.0%
GCAACTAATTATGCTTTGTC+AGG - chr5_4:20957698-20957717 None:intergenic 35.0%
! AATCATCTTCACCGTTTTCT+TGG + chr5_4:20957992-20958011 Msa0843280:CDS 35.0%
! ATCATCTTCACCGTTTTCTT+GGG + chr5_4:20957993-20958012 Msa0843280:CDS 35.0%
! CTAGGAGATGACTTTTATCT+TGG + chr5_4:20958026-20958045 Msa0843280:CDS 35.0%
! GAGATGACTTTTATCTTGGA+AGG + chr5_4:20958030-20958049 Msa0843280:CDS 35.0%
ATGACTCTTTGCAGTTTGAT+TGG + chr5_4:20958158-20958177 Msa0843280:intron 35.0%
AAAGCTTCAGAAGAAAAGGT+TGG + chr5_4:20958224-20958243 Msa0843280:CDS 35.0%
AAGCTTCAGAAGAAAAGGTT+GGG + chr5_4:20958225-20958244 Msa0843280:CDS 35.0%
ACAAAACAGCATAGAGAGAG+AGG + chr5_4:20947721-20947740 Msa0843280:five_prime_UTR 40.0%
CAAAACAGCATAGAGAGAGA+GGG + chr5_4:20947722-20947741 Msa0843280:five_prime_UTR 40.0%
AAAACAGCATAGAGAGAGAG+GGG + chr5_4:20947723-20947742 Msa0843280:five_prime_UTR 40.0%
ACAAAACAGCATAGAGAGAG+AGG + chr5_4:20947721-20947740 Msa0843280:five_prime_UTR 40.0%
CAAAACAGCATAGAGAGAGA+GGG + chr5_4:20947722-20947741 Msa0843280:five_prime_UTR 40.0%
AAAACAGCATAGAGAGAGAG+GGG + chr5_4:20947723-20947742 Msa0843280:five_prime_UTR 40.0%
! TTTAGCTCAAAGTGGAAGCA+TGG + chr5_4:20947873-20947892 Msa0843280:five_prime_UTR 40.0%
TAAAAGAAGAGAAAAGGCCG+AGG - chr5_4:20948119-20948138 None:intergenic 40.0%
CCAAAGTGCAGAGAAAGTTA+AGG - chr5_4:20948163-20948182 None:intergenic 40.0%
CCTTAACTTTCTCTGCACTT+TGG + chr5_4:20948160-20948179 Msa0843280:five_prime_UTR 40.0%
TTCTGTTTGCTTGCTCTCAT+AGG + chr5_4:20948186-20948205 Msa0843280:five_prime_UTR 40.0%
TCTGTTTGCTTGCTCTCATA+GGG + chr5_4:20948187-20948206 Msa0843280:five_prime_UTR 40.0%
!!! TATTTTGAGTTCACGGAGGA+GGG - chr5_4:20948241-20948260 None:intergenic 40.0%
GAATACAAATCTTCACCCTC+AGG + chr5_4:20948385-20948404 Msa0843280:intron 40.0%
ACATAGTTATGTCCACCTGA+GGG - chr5_4:20948403-20948422 None:intergenic 40.0%
TACATAGTTATGTCCACCTG+AGG - chr5_4:20948404-20948423 None:intergenic 40.0%
TTCTCTCAACTCTATGAGTG+AGG + chr5_4:20948503-20948522 Msa0843280:intron 40.0%
GTGAGTGCACAAATTTGTGA+AGG - chr5_4:20948642-20948661 None:intergenic 40.0%
AGCAACCCCAAACTAATCAA+AGG - chr5_4:20948794-20948813 None:intergenic 40.0%
!! GAGTTTTGTAAAGAAGCTGC+AGG - chr5_4:20948823-20948842 None:intergenic 40.0%
CATATCTGCTCCATTGTCAT+TGG + chr5_4:20948873-20948892 Msa0843280:intron 40.0%
AGAACTCGACATACCATTCA+AGG - chr5_4:20948978-20948997 None:intergenic 40.0%
AAGAAGTTCCTGCAAGAGTT+AGG - chr5_4:20949060-20949079 None:intergenic 40.0%
TATGTAGATGCTGATATGGC+CGG - chr5_4:20949240-20949259 None:intergenic 40.0%
AATGGAAATCAAATGCTCGC+TGG - chr5_4:20949264-20949283 None:intergenic 40.0%
! GTTCTTTTCCTGGGTTTGAT+AGG + chr5_4:20949352-20949371 Msa0843280:intron 40.0%
AGTAGATTCCTATCAAACCC+AGG - chr5_4:20949363-20949382 None:intergenic 40.0%
AGAGAAAGAAGAGATGAGCA+AGG - chr5_4:20949469-20949488 None:intergenic 40.0%
TGCTCATCTCTTCTTTCTCT+TGG + chr5_4:20949469-20949488 Msa0843280:intron 40.0%
TCTTTCTCTTGGTCATTCTC+AGG + chr5_4:20949480-20949499 Msa0843280:intron 40.0%
AGTTTCATATGACCAGGTAG+CGG + chr5_4:20949519-20949538 Msa0843280:intron 40.0%
AGTTCTTCACAAACACGCAA+TGG + chr5_4:20949802-20949821 Msa0843280:intron 40.0%
ACGTCTTTGTGAAGTTGTGT+TGG + chr5_4:20949832-20949851 Msa0843280:intron 40.0%
CGTCTTTGTGAAGTTGTGTT+GGG + chr5_4:20949833-20949852 Msa0843280:intron 40.0%
AAGTCTATACGGCTTAAAGC+AGG - chr5_4:20949898-20949917 None:intergenic 40.0%
! TTTTCTTCAAGCGACACACA+AGG + chr5_4:20949916-20949935 Msa0843280:intron 40.0%
ATCTATATGGAGCAACCTGA+AGG - chr5_4:20949966-20949985 None:intergenic 40.0%
ATTCTTACATGGAGACCTAG+AGG - chr5_4:20949994-20950013 None:intergenic 40.0%
TAGACCAAGGATTGCTCTAA+TGG + chr5_4:20950061-20950080 Msa0843280:intron 40.0%
ACATCCATTAGAGCAATCCT+TGG - chr5_4:20950068-20950087 None:intergenic 40.0%
TGAAGAAATATTCTCACCGG+TGG - chr5_4:20950099-20950118 None:intergenic 40.0%
AAAGCACGAATTGTCGTGAA+GGG - chr5_4:20950149-20950168 None:intergenic 40.0%
GACAATTCGTGCTTTGTATC+TGG + chr5_4:20950154-20950173 Msa0843280:intron 40.0%
CAATTCGTGCTTTGTATCTG+GGG + chr5_4:20950156-20950175 Msa0843280:intron 40.0%
GACCTGGTAAAATTACCAGA+TGG - chr5_4:20950242-20950261 None:intergenic 40.0%
AGAAGAGATGCAGTCTCTAA+AGG - chr5_4:20950279-20950298 None:intergenic 40.0%
!! CCGCAACCATTTTTCCTTAT+TGG + chr5_4:20950307-20950326 Msa0843280:intron 40.0%
AGCCATAGAGACAACCAATA+AGG - chr5_4:20950324-20950343 None:intergenic 40.0%
CTGTCTGATCTTCTCAATTG+AGG + chr5_4:20950425-20950444 Msa0843280:intron 40.0%
GCCATCTGTTCTTCATGTAT+TGG + chr5_4:20950494-20950513 Msa0843280:intron 40.0%
AACAGAACCCAATCAAATGG+AGG - chr5_4:20950546-20950565 None:intergenic 40.0%
GCTAACAGAACCCAATCAAA+TGG - chr5_4:20950549-20950568 None:intergenic 40.0%
GCTTCTTAGATTGAATGTCG+TGG + chr5_4:20950633-20950652 Msa0843280:intron 40.0%
GGTTCACCAAAAGATGAACT+TGG - chr5_4:20950734-20950753 None:intergenic 40.0%
! GTTCATCTTTTGGTGAACCA+AGG + chr5_4:20950735-20950754 Msa0843280:intron 40.0%
! ATGAAGGAGTGCATATACCT+TGG - chr5_4:20950755-20950774 None:intergenic 40.0%
TATGGAAAGAAAGCCTCCTA+TGG - chr5_4:20950851-20950870 None:intergenic 40.0%
TGCTTCACCCCAAAATGATT+TGG + chr5_4:20950946-20950965 Msa0843280:intron 40.0%
GCTTCACCCCAAAATGATTT+GGG + chr5_4:20950947-20950966 Msa0843280:intron 40.0%
AATCGTTCGGTTCATCCTTT+CGG + chr5_4:20951009-20951028 Msa0843280:intron 40.0%
GATCTACAATAGGCTGCAAA+TGG + chr5_4:20951088-20951107 Msa0843280:intron 40.0%
! GACAATGGTGGAGAGTATAT+AGG - chr5_4:20951115-20951134 None:intergenic 40.0%
GACGAAAGATCAAGTTCTTC+AGG - chr5_4:20951203-20951222 None:intergenic 40.0%
! TCTAGAGTGATCGTCAATGA+AGG + chr5_4:20951246-20951265 Msa0843280:intron 40.0%
!! AAAGTGTTGTGAACCACCAA+GGG + chr5_4:20951273-20951292 Msa0843280:intron 40.0%
AAGACATGAGCAAAGAACTG+TGG - chr5_4:20951510-20951529 None:intergenic 40.0%
ATTGCTCGTGGTAAAAAGGA+AGG - chr5_4:20951586-20951605 None:intergenic 40.0%
GATCATTGCTCGTGGTAAAA+AGG - chr5_4:20951590-20951609 None:intergenic 40.0%
CGTCTAAACCTTATCTCAAC+AGG - chr5_4:20951682-20951701 None:intergenic 40.0%
ATAAGGTTTAGACGCATGTC+TGG + chr5_4:20951688-20951707 Msa0843280:intron 40.0%
GACTTTGGTATGGTGAAGAT+GGG - chr5_4:20951808-20951827 None:intergenic 40.0%
AGACTTTGGTATGGTGAAGA+TGG - chr5_4:20951809-20951828 None:intergenic 40.0%
TTCATGAGGGGTTACATGAA+AGG + chr5_4:20951855-20951874 Msa0843280:intron 40.0%
! ATCTGCCTCGTGATTTTTCA+CGG + chr5_4:20952127-20952146 Msa0843280:intron 40.0%
GTCTTGACTCTTCATTCAAC+AGG + chr5_4:20952232-20952251 Msa0843280:intron 40.0%
! TCCATGCTAAGTTTTCCATC+TGG + chr5_4:20952270-20952289 Msa0843280:intron 40.0%
TCCAGATGGAAAACTTAGCA+TGG - chr5_4:20952274-20952293 None:intergenic 40.0%
! GTGAAGTTAGAGTACTCAGA+CGG - chr5_4:20952453-20952472 None:intergenic 40.0%
ACTTCACCAGTCTTCTAACA+AGG + chr5_4:20952466-20952485 Msa0843280:intron 40.0%
GGAAGTCTTTGCAATACAAG+TGG + chr5_4:20952691-20952710 Msa0843280:intron 40.0%
TACAAGTGGTCTTCCATCAT+TGG + chr5_4:20952705-20952724 Msa0843280:intron 40.0%
CACATATTGGAAGCCAATGA+TGG - chr5_4:20952721-20952740 None:intergenic 40.0%
GCTTGAACATATCACCATCA+TGG + chr5_4:20952757-20952776 Msa0843280:intron 40.0%
GTATACGATACTAGTCACAC+TGG - chr5_4:20952830-20952849 None:intergenic 40.0%
TTGCATGTCTAGGAAAGTTC+TGG - chr5_4:20952946-20952965 None:intergenic 40.0%
!!! TATTTTGAGTTCACGGAGGA+GGG - chr5_4:20948241-20948260 None:intergenic 40.0%
GAATACAAATCTTCACCCTC+AGG + chr5_4:20948385-20948404 Msa0843280:intron 40.0%
ACATAGTTATGTCCACCTGA+GGG - chr5_4:20948403-20948422 None:intergenic 40.0%
TACATAGTTATGTCCACCTG+AGG - chr5_4:20948404-20948423 None:intergenic 40.0%
TTCTCTCAACTCTATGAGTG+AGG + chr5_4:20948503-20948522 Msa0843280:intron 40.0%
GTGAGTGCACAAATTTGTGA+AGG - chr5_4:20948642-20948661 None:intergenic 40.0%
GGAATAATGACCTTTACCTC+AGG - chr5_4:20953832-20953851 None:intergenic 40.0%
GCACAGATAATGACTTATGG+TGG + chr5_4:20954001-20954020 Msa0843280:five_prime_UTR 40.0%
CAAAAGTGAAAGCTGGAATG+AGG - chr5_4:20954069-20954088 None:intergenic 40.0%
GCAAGTACAAAAGTGAAAGC+TGG - chr5_4:20954076-20954095 None:intergenic 40.0%
CATACCCTTGTCTTTAGATG+TGG + chr5_4:20954638-20954657 Msa0843280:intron 40.0%
TACCCTTGTCTTTAGATGTG+GGG + chr5_4:20954640-20954659 Msa0843280:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr5_4:20954672-20954691 Msa0843280:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr5_4:20954673-20954692 Msa0843280:intron 40.0%
! ACACAAAGGTGTATGTTGTG+TGG - chr5_4:20954699-20954718 None:intergenic 40.0%
ACACAACATACACCTTTGTG+TGG + chr5_4:20954698-20954717 Msa0843280:intron 40.0%
ATTAAATCTGGGCCACACAA+AGG - chr5_4:20954684-20954703 None:intergenic 40.0%
GTGGTTCAGATGTGTTGTAT+GGG - chr5_4:20954740-20954759 None:intergenic 40.0%
TGTGGTTCAGATGTGTTGTA+TGG - chr5_4:20954741-20954760 None:intergenic 40.0%
! ACACAATGGTTTGTGTTGTG+TGG - chr5_4:20954759-20954778 None:intergenic 40.0%
ACACAACACAAACCATTGTG+TGG + chr5_4:20954758-20954777 Msa0843280:intron 40.0%
TCTGAATCCAATCATTGGAG+TGG + chr5_4:20955417-20955436 Msa0843280:five_prime_UTR 40.0%
GATATCACCACTCCAATGAT+TGG - chr5_4:20955427-20955446 None:intergenic 40.0%
CTTGATTCTATGTGATGCCA+TGG + chr5_4:20955916-20955935 Msa0843280:five_prime_UTR 40.0%
TAGTTCCTATTGCTTTGGCT+TGG - chr5_4:20956093-20956112 None:intergenic 40.0%
GGAACTATAGTATCAATGGC+TGG + chr5_4:20956106-20956125 Msa0843280:five_prime_UTR 40.0%
! GGGAGTATATGCCTTAATTG+TGG + chr5_4:20956464-20956483 Msa0843280:five_prime_UTR 40.0%
TGGTTAGAGATCAAAGTGCA+TGG + chr5_4:20956484-20956503 Msa0843280:five_prime_UTR 40.0%
GGTTAGAGATCAAAGTGCAT+GGG + chr5_4:20956485-20956504 Msa0843280:five_prime_UTR 40.0%
GGGAACTAAAGCTTGATATG+GGG + chr5_4:20956505-20956524 Msa0843280:exon 40.0%
! TTTTCGGTGAGACAACTTGT+TGG - chr5_4:20956789-20956808 None:intergenic 40.0%
ATATACTTGTAGAGAGGGGT+AGG + chr5_4:20956912-20956931 Msa0843280:intron 40.0%
TATACTTGTAGAGAGGGGTA+GGG + chr5_4:20956913-20956932 Msa0843280:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr5_4:20957040-20957059 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr5_4:20957041-20957060 None:intergenic 40.0%
GATACTCACGATTTCTTGCA+AGG - chr5_4:20957187-20957206 None:intergenic 40.0%
AATCGTGAGTATCTCTGTCA+AGG + chr5_4:20957194-20957213 Msa0843280:intron 40.0%
ATCGTGAGTATCTCTGTCAA+GGG + chr5_4:20957195-20957214 Msa0843280:intron 40.0%
TGTGGTATTCCCTCTTATCT+TGG + chr5_4:20957239-20957258 Msa0843280:intron 40.0%
TGTCCGGTCCTTATAACTAA+TGG - chr5_4:20957319-20957338 None:intergenic 40.0%
GCAGCTATTGCCTGTTAATA+GGG - chr5_4:20957891-20957910 None:intergenic 40.0%
TGCAGCTATTGCCTGTTAAT+AGG - chr5_4:20957892-20957911 None:intergenic 40.0%
TAACAGGCAATAGCTGCAAT+AGG + chr5_4:20957894-20957913 Msa0843280:intron 40.0%
AACAGGCAATAGCTGCAATA+GGG + chr5_4:20957895-20957914 Msa0843280:intron 40.0%
TGTGCTATGTTTAAGCCGAT+CGG + chr5_4:20957969-20957988 Msa0843280:CDS 40.0%
!! GATTGGTGCTGTTATAATCG+TGG + chr5_4:20958175-20958194 Msa0843280:CDS 40.0%
! TAGGATTTTATGCCGTGCAA+TGG + chr5_4:20958198-20958217 Msa0843280:CDS 40.0%
! AGGATTTTATGCCGTGCAAT+GGG + chr5_4:20958199-20958218 Msa0843280:CDS 40.0%
TCAGAAGAAAAGGTTGGGAA+AGG + chr5_4:20958230-20958249 Msa0843280:CDS 40.0%
CAGAAGAAAAGGTTGGGAAA+GGG + chr5_4:20958231-20958250 Msa0843280:CDS 40.0%
CAGAGAAAGAGAGAGATGGT+GGG + chr5_4:20947790-20947809 Msa0843280:five_prime_UTR 45.0%
TAAGGGAAGAAGCAAGATGC+TGG - chr5_4:20947968-20947987 None:intergenic 45.0%
AGTGCAGAGAAAGTTAAGGG+AGG - chr5_4:20948159-20948178 None:intergenic 45.0%
! TGCTCTCATAGGGTTAGTGT+TGG + chr5_4:20948197-20948216 Msa0843280:intron 45.0%
! GCTCTCATAGGGTTAGTGTT+GGG + chr5_4:20948198-20948217 Msa0843280:intron 45.0%
!!! CTATTTTGAGTTCACGGAGG+AGG - chr5_4:20948242-20948261 None:intergenic 45.0%
CTCCTCCGTGAACTCAAAAT+AGG + chr5_4:20948240-20948259 Msa0843280:intron 45.0%
!!! TGCCTATTTTGAGTTCACGG+AGG - chr5_4:20948245-20948264 None:intergenic 45.0%
TGGAGATTTAAGAGGCCTAC+GGG - chr5_4:20948350-20948369 None:intergenic 45.0%
GTGGAGATTTAAGAGGCCTA+CGG - chr5_4:20948351-20948370 None:intergenic 45.0%
TACAAATCTTCACCCTCAGG+TGG + chr5_4:20948388-20948407 Msa0843280:intron 45.0%
! GAGTTCCTCATAAGAGTGTG+AGG - chr5_4:20948475-20948494 None:intergenic 45.0%
AAATAGCACACGGTAGTGCA+AGG - chr5_4:20948596-20948615 None:intergenic 45.0%
TCCTTCTTCACATGGCAAGT+TGG + chr5_4:20948705-20948724 Msa0843280:intron 45.0%
ATAGTTTCCCTTTGGCTGGA+GGG - chr5_4:20948771-20948790 None:intergenic 45.0%
AAGGATAGTTTCCCTTTGGC+TGG - chr5_4:20948775-20948794 None:intergenic 45.0%
TTGTAAAGAAGCTGCAGGCT+TGG - chr5_4:20948818-20948837 None:intergenic 45.0%
TCACTGGATACGTGATGTGT+TGG - chr5_4:20948932-20948951 None:intergenic 45.0%
! ACATCGATGTGAGGTATCAC+TGG - chr5_4:20948948-20948967 None:intergenic 45.0%
CGATGTGTTTCGACCTTGAA+TGG + chr5_4:20948962-20948981 Msa0843280:intron 45.0%
TGCTGAGGTGAATTGCACTT+TGG + chr5_4:20948998-20949017 Msa0843280:intron 45.0%
AAGGTTGTAAGGAGATCCTG+TGG - chr5_4:20949086-20949105 None:intergenic 45.0%
CGCAATCACTGAAGGTTGTA+AGG - chr5_4:20949097-20949116 None:intergenic 45.0%
GAGTACATCGCAATCACTGA+AGG - chr5_4:20949105-20949124 None:intergenic 45.0%
GTGCTGTGAAATGGATACTG+AGG - chr5_4:20949326-20949345 None:intergenic 45.0%
!! AACACTGGAGTGCTGTGAAA+TGG - chr5_4:20949335-20949354 None:intergenic 45.0%
! CACTCCAGTGTTCTTTTCCT+GGG + chr5_4:20949343-20949362 Msa0843280:intron 45.0%
CAAACCCAGGAAAAGAACAC+TGG - chr5_4:20949350-20949369 None:intergenic 45.0%
CTACCCACTGCTGAAGAATA+GGG + chr5_4:20949441-20949460 Msa0843280:intron 45.0%
GGTGCAGTGAAGAAGATTCT+TGG - chr5_4:20949657-20949676 None:intergenic 45.0%
TAAAGCAGGCTCCAAGACAA+TGG - chr5_4:20949884-20949903 None:intergenic 45.0%
CTAGTTTAGCAGCTAGACCA+AGG + chr5_4:20950048-20950067 Msa0843280:intron 45.0%
ATGGATGTCATCTTCACCAC+CGG + chr5_4:20950080-20950099 Msa0843280:intron 45.0%
!! AAGGGGTGCCATCAAAAGAA+AGG - chr5_4:20950131-20950150 None:intergenic 45.0%
AAGCACGAATTGTCGTGAAG+GGG - chr5_4:20950148-20950167 None:intergenic 45.0%
CAAAGCACGAATTGTCGTGA+AGG - chr5_4:20950150-20950169 None:intergenic 45.0%
! GTGCTTTGTATCTGGGGTTT+GGG + chr5_4:20950162-20950181 Msa0843280:intron 45.0%
TTCAATGCCCTCTTTCCATC+TGG + chr5_4:20950224-20950243 Msa0843280:intron 45.0%
AGACTGCATCTCTTCTTCCA+TGG + chr5_4:20950283-20950302 Msa0843280:intron 45.0%
ATGGCTTCCATGAAGCTTTG+AGG + chr5_4:20950338-20950357 Msa0843280:intron 45.0%
AGGAGAACCTCAAAGCTTCA+TGG - chr5_4:20950348-20950367 None:intergenic 45.0%
ATCAGGCTCCTCCATTTGAT+TGG + chr5_4:20950535-20950554 Msa0843280:intron 45.0%
TCAGGCTCCTCCATTTGATT+GGG + chr5_4:20950536-20950555 Msa0843280:intron 45.0%
CGAACCATCTTCTTAGTAGC+AGG + chr5_4:20950692-20950711 Msa0843280:intron 45.0%
GGATCCTGCTACTAAGAAGA+TGG - chr5_4:20950699-20950718 None:intergenic 45.0%
GACTCTCAAATGACCATAGG+AGG + chr5_4:20950835-20950854 Msa0843280:intron 45.0%
AGATGAATGGAGTAGCCGAA+AGG - chr5_4:20951027-20951046 None:intergenic 45.0%
TCCATTCATCTGAGGAGTCT+TGG + chr5_4:20951036-20951055 Msa0843280:intron 45.0%
CCATTCATCTGAGGAGTCTT+GGG + chr5_4:20951037-20951056 Msa0843280:intron 45.0%
GCAGCCTATTGTAGATCTCA+TGG - chr5_4:20951085-20951104 None:intergenic 45.0%
AATTCCATGCCTCCGTAGAA+CGG - chr5_4:20951171-20951190 None:intergenic 45.0%
!! CAAAGTGTTGTGAACCACCA+AGG + chr5_4:20951272-20951291 Msa0843280:intron 45.0%
TCTACATCTGAAAGGTCCCT+TGG - chr5_4:20951292-20951311 None:intergenic 45.0%
TCCTGTGAAGATTGTCTAGC+AGG - chr5_4:20951400-20951419 None:intergenic 45.0%
CAATCTTCACAGGATTCCAG+TGG + chr5_4:20951406-20951425 Msa0843280:intron 45.0%
AAACATCAAGGGTCAACCAC+TGG - chr5_4:20951425-20951444 None:intergenic 45.0%
AGTGGTTGACCCTTGATGTT+TGG + chr5_4:20951424-20951443 Msa0843280:intron 45.0%
CCACATGAGCGAGAAAAGTT+TGG - chr5_4:20951473-20951492 None:intergenic 45.0%
! CCAAACTTTTCTCGCTCATG+TGG + chr5_4:20951470-20951489 Msa0843280:intron 45.0%
GGCTCTCTGTATGTTATGCA+GGG - chr5_4:20951565-20951584 None:intergenic 45.0%
AGGCTCTCTGTATGTTATGC+AGG - chr5_4:20951566-20951585 None:intergenic 45.0%
GGTAGATGGAAGCTCAGTAA+GGG - chr5_4:20951619-20951638 None:intergenic 45.0%
TGGTAGATGGAAGCTCAGTA+AGG - chr5_4:20951620-20951639 None:intergenic 45.0%
TCCATCTACCAGCTCCAAAT+TGG + chr5_4:20951629-20951648 Msa0843280:intron 45.0%
! ACCAATTTGGAGCTGGTAGA+TGG - chr5_4:20951633-20951652 None:intergenic 45.0%
ACAAGCAAGATTGCTGGCAT+TGG - chr5_4:20951775-20951794 None:intergenic 45.0%
GATGTCACAAGCAAGATTGC+TGG - chr5_4:20951781-20951800 None:intergenic 45.0%
TAGCGTCTGATGACTGCATT+TGG - chr5_4:20951900-20951919 None:intergenic 45.0%
ATCCTTCAAGAGAGATCAGC+AGG - chr5_4:20952040-20952059 None:intergenic 45.0%
!! TTTCACGGCCACCTTTTTCA+CGG + chr5_4:20952142-20952161 Msa0843280:intron 45.0%
AGCAAGAACCGTGAAAAAGG+TGG - chr5_4:20952153-20952172 None:intergenic 45.0%
AGGAGCAAGAACCGTGAAAA+AGG - chr5_4:20952156-20952175 None:intergenic 45.0%
ACGTCGTTGACAATAGAGGA+AGG - chr5_4:20952176-20952195 None:intergenic 45.0%
TCCTCTATTGTCAACGACGT+TGG + chr5_4:20952176-20952195 Msa0843280:intron 45.0%
GAGTCAAGACGAAGAGAAAG+AGG - chr5_4:20952222-20952241 None:intergenic 45.0%
CAGTTCCTTACCTGAGAGTT+GGG - chr5_4:20952328-20952347 None:intergenic 45.0%
TCAGTTCCTTACCTGAGAGT+TGG - chr5_4:20952329-20952348 None:intergenic 45.0%
AGCACACCTTGTTAGAAGAC+TGG - chr5_4:20952475-20952494 None:intergenic 45.0%
CGTCCATAACTCATACGCAT+TGG + chr5_4:20952536-20952555 Msa0843280:intron 45.0%
GAAAAAGACCGCTACCGAAT+GGG - chr5_4:20952640-20952659 None:intergenic 45.0%
AGAAAAAGACCGCTACCGAA+TGG - chr5_4:20952641-20952660 None:intergenic 45.0%
!! TTCGGTAGCGGTCTTTTTCT+CGG + chr5_4:20952641-20952660 Msa0843280:intron 45.0%
!!! CTTTTTGGGTGATTGGCTCA+TGG + chr5_4:20952670-20952689 Msa0843280:intron 45.0%
CGGCTGACAACTACACATAT+TGG - chr5_4:20952734-20952753 None:intergenic 45.0%
GATGGTTCAATCAGCCATGA+TGG - chr5_4:20952774-20952793 None:intergenic 45.0%
CCTGTGTAACTCAAGATGGA+TGG - chr5_4:20952792-20952811 None:intergenic 45.0%
CCATCCATCTTGAGTTACAC+AGG + chr5_4:20952789-20952808 Msa0843280:intron 45.0%
TAGTTCGTGAATAGTGCACC+AGG + chr5_4:20952860-20952879 Msa0843280:intron 45.0%
! CTCTTACCTGGGAATTTTCC+TGG - chr5_4:20952881-20952900 None:intergenic 45.0%
GGAAAATTCCCAGGTAAGAG+AGG + chr5_4:20952881-20952900 Msa0843280:intron 45.0%
AAATTCCCAGGTAAGAGAGG+TGG + chr5_4:20952884-20952903 Msa0843280:intron 45.0%
AATTCCCAGGTAAGAGAGGT+GGG + chr5_4:20952885-20952904 Msa0843280:intron 45.0%
! AGTTCTGGCAAGGAAAGACT+TGG - chr5_4:20952931-20952950 None:intergenic 45.0%
! TGTCTAGGAAAGTTCTGGCA+AGG - chr5_4:20952941-20952960 None:intergenic 45.0%
!!! CTATTTTGAGTTCACGGAGG+AGG - chr5_4:20948242-20948261 None:intergenic 45.0%
CTCCTCCGTGAACTCAAAAT+AGG + chr5_4:20948240-20948259 Msa0843280:intron 45.0%
!!! TGCCTATTTTGAGTTCACGG+AGG - chr5_4:20948245-20948264 None:intergenic 45.0%
TGGAGATTTAAGAGGCCTAC+GGG - chr5_4:20948350-20948369 None:intergenic 45.0%
GTGGAGATTTAAGAGGCCTA+CGG - chr5_4:20948351-20948370 None:intergenic 45.0%
TACAAATCTTCACCCTCAGG+TGG + chr5_4:20948388-20948407 Msa0843280:intron 45.0%
! GAGTTCCTCATAAGAGTGTG+AGG - chr5_4:20948475-20948494 None:intergenic 45.0%
AAATAGCACACGGTAGTGCA+AGG - chr5_4:20948596-20948615 None:intergenic 45.0%
TCCTTCTTCACATGGCAAGT+TGG + chr5_4:20948705-20948724 Msa0843280:intron 45.0%
CCTCAGGGAAAAGTCGATTA+TGG - chr5_4:20953816-20953835 None:intergenic 45.0%
!! CCATAATCGACTTTTCCCTG+AGG + chr5_4:20953813-20953832 Msa0843280:intron 45.0%
! TCGACTTTTCCCTGAGGTAA+AGG + chr5_4:20953819-20953838 Msa0843280:intron 45.0%
ATCTGTGCTGAAGATCTGCA+AGG - chr5_4:20953989-20954008 None:intergenic 45.0%
AGCATTGCAGATGCAAGAGT+AGG - chr5_4:20954043-20954062 None:intergenic 45.0%
CACCCCACATCTAAAGACAA+GGG - chr5_4:20954645-20954664 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr5_4:20954717-20954736 None:intergenic 45.0%
AGTAGCCAAGCCAAAGCAAT+AGG + chr5_4:20956085-20956104 Msa0843280:five_prime_UTR 45.0%
! TTGGGAGGGTTTTTATGTGC+TGG + chr5_4:20956229-20956248 Msa0843280:five_prime_UTR 45.0%
! TTCTTGCAAGGTATTCCCTC+TGG - chr5_4:20957175-20957194 None:intergenic 45.0%
TCGTGAGTATCTCTGTCAAG+GGG + chr5_4:20957196-20957215 Msa0843280:intron 45.0%
ATAAGGACCGGACAACATTC+AGG + chr5_4:20957325-20957344 Msa0843280:intron 45.0%
ATGTGGTCCTGAATGTTGTC+CGG - chr5_4:20957335-20957354 None:intergenic 45.0%
ACGGTGAAGATGATTCCGAT+CGG - chr5_4:20957987-20958006 None:intergenic 45.0%
!! GGTGCTGTTATAATCGTGGT+AGG + chr5_4:20958179-20958198 Msa0843280:CDS 45.0%
! GGATTTTATGCCGTGCAATG+GGG + chr5_4:20958200-20958219 Msa0843280:CDS 45.0%
GGGCAAAGCTTCAGAAGAAA+AGG + chr5_4:20958220-20958239 Msa0843280:CDS 45.0%
!! AGAATTAATAAAATAAAAAA+GGG - chr5_4:20948012-20948031 None:intergenic 5.0%
!!! AAATTTATAAAACTTTTAAA+TGG + chr5_4:20955872-20955891 Msa0843280:five_prime_UTR 5.0%
!! ATAATATACAAAAAAAATTT+AGG - chr5_4:20956760-20956779 None:intergenic 5.0%
!!! TAAATTTTTTTTGTATATTA+TGG + chr5_4:20956759-20956778 Msa0843280:intron 5.0%
!! TTTAATATTAAAAAATAGTA+CGG - chr5_4:20957747-20957766 None:intergenic 5.0%
GCAGAGAAAGAGAGAGATGG+TGG + chr5_4:20947789-20947808 Msa0843280:five_prime_UTR 50.0%
!! GAAAGAGAGAGATGGTGGGA+TGG + chr5_4:20947794-20947813 Msa0843280:five_prime_UTR 50.0%
GTGGGATGGCTGAACTTGAA+TGG + chr5_4:20947808-20947827 Msa0843280:five_prime_UTR 50.0%
! AGCTCAAAGTGGAAGCATGG+TGG + chr5_4:20947876-20947895 Msa0843280:five_prime_UTR 50.0%
CAAGATGCTGGAAAGTCCCA+TGG - chr5_4:20947956-20947975 None:intergenic 50.0%
ACGGAGGAGGGAAATTATGC+AGG - chr5_4:20948229-20948248 None:intergenic 50.0%
TCTCAACACTCTGCGTGTTG+AGG + chr5_4:20948540-20948559 Msa0843280:intron 50.0%
GCCAACTTGCCATGTGAAGA+AGG - chr5_4:20948709-20948728 None:intergenic 50.0%
TAGTTTCCCTTTGGCTGGAG+GGG - chr5_4:20948770-20948789 None:intergenic 50.0%
GATAGTTTCCCTTTGGCTGG+AGG - chr5_4:20948772-20948791 None:intergenic 50.0%
GGTCGAAACACATCGATGTG+AGG - chr5_4:20948957-20948976 None:intergenic 50.0%
GGTATGTCGAGTTCTTGCTG+AGG + chr5_4:20948983-20949002 Msa0843280:intron 50.0%
GATTCTGGCCTAACTCTTGC+AGG + chr5_4:20949049-20949068 Msa0843280:intron 50.0%
GCAGGAACTTCTTCATCCAC+AGG + chr5_4:20949067-20949086 Msa0843280:intron 50.0%
TGCGATGTACTCTGCTTCTG+TGG + chr5_4:20949113-20949132 Msa0843280:intron 50.0%
! GCACTCCAGTGTTCTTTTCC+TGG + chr5_4:20949342-20949361 Msa0843280:intron 50.0%
! CCAGACATCGGTTATGCTGT+AGG - chr5_4:20949393-20949412 None:intergenic 50.0%
CCTACAGCATAACCGATGTC+TGG + chr5_4:20949390-20949409 Msa0843280:intron 50.0%
TGCAGACCATGGCGTACATA+AGG + chr5_4:20949418-20949437 Msa0843280:intron 50.0%
GCTACCCACTGCTGAAGAAT+AGG + chr5_4:20949440-20949459 Msa0843280:intron 50.0%
GTGCCCTATTCTTCAGCAGT+GGG - chr5_4:20949447-20949466 None:intergenic 50.0%
! CACACAAGGTGTTCTTTGCC+TGG + chr5_4:20949930-20949949 Msa0843280:intron 50.0%
CCTGAAGGTTTCGTTGAACC+AGG - chr5_4:20949951-20949970 None:intergenic 50.0%
CCTGGTTCAACGAAACCTTC+AGG + chr5_4:20949948-20949967 Msa0843280:intron 50.0%
! CGTGCTTTGTATCTGGGGTT+TGG + chr5_4:20950161-20950180 Msa0843280:intron 50.0%
GGAGAATGAGACGTATGACC+TGG - chr5_4:20950258-20950277 None:intergenic 50.0%
GGAAAAATGGTTGCGGTCCA+TGG - chr5_4:20950303-20950322 None:intergenic 50.0%
TCGGCTACTCCATTCATCTG+AGG + chr5_4:20951028-20951047 Msa0843280:intron 50.0%
CCCAAGACTCCTCAGATGAA+TGG - chr5_4:20951040-20951059 None:intergenic 50.0%
TTCATCTGAGGAGTCTTGGG+AGG + chr5_4:20951040-20951059 Msa0843280:intron 50.0%
TCTTCCAGTTGCCCGTTCTA+CGG + chr5_4:20951156-20951175 Msa0843280:intron 50.0%
ATTCCATGCCTCCGTAGAAC+GGG - chr5_4:20951170-20951189 None:intergenic 50.0%
ACATCTGAAAGGTCCCTTGG+TGG - chr5_4:20951289-20951308 None:intergenic 50.0%
GCCTGCTAGACAATCTTCAC+AGG + chr5_4:20951396-20951415 Msa0843280:intron 50.0%
GAACTGTGGCACAAACGACT+TGG - chr5_4:20951496-20951515 None:intergenic 50.0%
! GGAAGCATGATCATTGCTCG+TGG - chr5_4:20951598-20951617 None:intergenic 50.0%
CTCTAAGCTCGTGTTGAAGG+AGG - chr5_4:20951725-20951744 None:intergenic 50.0%
!! TGGCTCTAAGCTCGTGTTGA+AGG - chr5_4:20951728-20951747 None:intergenic 50.0%
TTCAAGAGAGATCAGCAGGC+TGG - chr5_4:20952036-20952055 None:intergenic 50.0%
AGCCTGCTGATCTCTCTTGA+AGG + chr5_4:20952035-20952054 Msa0843280:intron 50.0%
GCCAACGTCGTTGACAATAG+AGG - chr5_4:20952180-20952199 None:intergenic 50.0%
CTCAGCAATTCTGCTCCAGA+TGG - chr5_4:20952288-20952307 None:intergenic 50.0%
! ACTAGAGTGTCCCAACTCTC+AGG + chr5_4:20952315-20952334 Msa0843280:intron 50.0%
AGTGTCCCAACTCTCAGGTA+AGG + chr5_4:20952320-20952339 Msa0843280:intron 50.0%
!! TCGGTAGCGGTCTTTTTCTC+GGG + chr5_4:20952642-20952661 Msa0843280:intron 50.0%
AGTGCACCAGGAAAATTCCC+AGG + chr5_4:20952872-20952891 Msa0843280:intron 50.0%
TTGACCCACCTCTCTTACCT+GGG - chr5_4:20952892-20952911 None:intergenic 50.0%
ATTGACCCACCTCTCTTACC+TGG - chr5_4:20952893-20952912 None:intergenic 50.0%
! GGAGCTCTGATACCACTGTT+GGG + chr5_4:20953099-20953118 Msa0843280:intron 50.0%
ATGCAGGCATTTCCCAACAG+TGG - chr5_4:20953114-20953133 None:intergenic 50.0%
ACGGAGGAGGGAAATTATGC+AGG - chr5_4:20948229-20948248 None:intergenic 50.0%
TCTCAACACTCTGCGTGTTG+AGG + chr5_4:20948540-20948559 Msa0843280:intron 50.0%
GCCAACTTGCCATGTGAAGA+AGG - chr5_4:20948709-20948728 None:intergenic 50.0%
CCACCCCACATCTAAAGACA+AGG - chr5_4:20954646-20954665 None:intergenic 50.0%
CCTTGTCTTTAGATGTGGGG+TGG + chr5_4:20954643-20954662 Msa0843280:intron 50.0%
TGAAGCTTTGCCCCATTGCA+CGG - chr5_4:20958213-20958232 None:intergenic 50.0%
GGGGCAGAGAAAGAGAGAGA+TGG + chr5_4:20947786-20947805 Msa0843280:five_prime_UTR 55.0%
GTAAAAACCACGGGACCCGT+AGG + chr5_4:20948332-20948351 Msa0843280:intron 55.0%
AATTCTCCCCCTCCAGCCAA+AGG + chr5_4:20948760-20948779 Msa0843280:intron 55.0%
ATTCTCCCCCTCCAGCCAAA+GGG + chr5_4:20948761-20948780 Msa0843280:intron 55.0%
AGTTTCCCTTTGGCTGGAGG+GGG - chr5_4:20948769-20948788 None:intergenic 55.0%
!! GGGTAGCCTTATGTACGCCA+TGG - chr5_4:20949427-20949446 None:intergenic 55.0%
GGTGCCCTATTCTTCAGCAG+TGG - chr5_4:20949448-20949467 None:intergenic 55.0%
GATGGTTCGAAGCAGAGACG+TGG - chr5_4:20950681-20950700 None:intergenic 55.0%
!! TGGCATTGGCGAGGTGATTC+TGG - chr5_4:20951761-20951780 None:intergenic 55.0%
!! CAAGATTGCTGGCATTGGCG+AGG - chr5_4:20951770-20951789 None:intergenic 55.0%
GGTGGCCGTGAAAAATCACG+AGG - chr5_4:20952135-20952154 None:intergenic 55.0%
CCGAATGGGAGACGGAGAAT+CGG - chr5_4:20952626-20952645 None:intergenic 55.0%
CCGATTCTCCGTCTCCCATT+CGG + chr5_4:20952623-20952642 Msa0843280:intron 55.0%
ACCTCAGAGTCCCAGAGCAA+CGG + chr5_4:20953077-20953096 Msa0843280:intron 55.0%
ATCAGAGCTCCCGTTGCTCT+GGG - chr5_4:20953090-20953109 None:intergenic 55.0%
TATCAGAGCTCCCGTTGCTC+TGG - chr5_4:20953091-20953110 None:intergenic 55.0%
! GGGAGCTCTGATACCACTGT+TGG + chr5_4:20953098-20953117 Msa0843280:intron 55.0%
GTAAAAACCACGGGACCCGT+AGG + chr5_4:20948332-20948351 Msa0843280:intron 55.0%
ACATGGTGCGTGCAAAGAGC+TGG + chr5_4:20957936-20957955 Msa0843280:CDS 55.0%
GCTGGAGGGGGAGAATTGTG+GGG - chr5_4:20948757-20948776 None:intergenic 60.0%
GGCTGGAGGGGGAGAATTGT+GGG - chr5_4:20948758-20948777 None:intergenic 60.0%
TGGCTGGAGGGGGAGAATTG+TGG - chr5_4:20948759-20948778 None:intergenic 60.0%
TTGCAGGGGGAGCTGTCTCA+TGG - chr5_4:20949173-20949192 None:intergenic 60.0%
GTCTGCACGAGGCCAGACAT+CGG - chr5_4:20949405-20949424 None:intergenic 60.0%
TGTACGCCATGGTCTGCACG+AGG - chr5_4:20949416-20949435 None:intergenic 60.0%
CCTGTGCATGTTCCGCTACC+TGG - chr5_4:20949534-20949553 None:intergenic 60.0%
!! CCAGGTAGCGGAACATGCAC+AGG + chr5_4:20949531-20949550 Msa0843280:intron 60.0%
TCCAGTTGCCCGTTCTACGG+AGG + chr5_4:20951159-20951178 Msa0843280:intron 60.0%
TTGCCCGTTCTACGGAGGCA+TGG + chr5_4:20951164-20951183 Msa0843280:intron 60.0%
GGTTGCTACGACTGCTGTCG+TGG + chr5_4:20951963-20951982 Msa0843280:intron 60.0%
CTCCGTCTCCCATTCGGTAG+CGG + chr5_4:20952629-20952648 Msa0843280:intron 60.0%
GACCGCTACCGAATGGGAGA+CGG - chr5_4:20952634-20952653 None:intergenic 60.0%
CCTCAGAGTCCCAGAGCAAC+GGG + chr5_4:20953078-20953097 Msa0843280:intron 60.0%
TAAGAGGCCTACGGGTCCCG+TGG - chr5_4:20948342-20948361 None:intergenic 65.0%
GTCTGGCCTCGTGCAGACCA+TGG + chr5_4:20949407-20949426 Msa0843280:intron 65.0%
GCCTCCGTAGAACGGGCAAC+TGG - chr5_4:20951163-20951182 None:intergenic 65.0%
!! CCCGTTGCTCTGGGACTCTG+AGG - chr5_4:20953081-20953100 None:intergenic 65.0%
TAAGAGGCCTACGGGTCCCG+TGG - chr5_4:20948342-20948361 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 20947618 20958412 20947618 ID=Msa0843280;Name=Msa0843280
chr5_4 mRNA 20947618 20958412 20947618 ID=Msa0843280-mRNA-1;Parent=Msa0843280;Name=Msa0843280-mRNA-1;_AED=0.11;_eAED=0.11;_QI=2582|1|1|1|0.37|0.22|9|102|105
chr5_4 exon 20947618 20947742 20947618 ID=Msa0843280-mRNA-1:exon:8650;Parent=Msa0843280-mRNA-1
chr5_4 exon 20947785 20948004 20947785 ID=Msa0843280-mRNA-1:exon:8651;Parent=Msa0843280-mRNA-1
chr5_4 exon 20948146 20948208 20948146 ID=Msa0843280-mRNA-1:exon:8652;Parent=Msa0843280-mRNA-1
chr5_4 exon 20953994 20954107 20953994 ID=Msa0843280-mRNA-1:exon:8653;Parent=Msa0843280-mRNA-1
chr5_4 exon 20954200 20954656 20954200 ID=Msa0843280-mRNA-1:exon:8654;Parent=Msa0843280-mRNA-1
chr5_4 exon 20954833 20954944 20954833 ID=Msa0843280-mRNA-1:exon:8655;Parent=Msa0843280-mRNA-1
chr5_4 exon 20955031 20956548 20955031 ID=Msa0843280-mRNA-1:exon:8656;Parent=Msa0843280-mRNA-1
chr5_4 exon 20957900 20958051 20957900 ID=Msa0843280-mRNA-1:exon:8657;Parent=Msa0843280-mRNA-1
chr5_4 exon 20958172 20958412 20958172 ID=Msa0843280-mRNA-1:exon:8658;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20947618 20947742 20947618 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20947785 20948004 20947785 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20948146 20948208 20948146 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20953994 20954107 20953994 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20954200 20954656 20954200 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20954833 20954944 20954833 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 five_prime_UTR 20955031 20956521 20955031 ID=Msa0843280-mRNA-1:five_prime_utr;Parent=Msa0843280-mRNA-1
chr5_4 CDS 20956522 20956548 20956522 ID=Msa0843280-mRNA-1:cds;Parent=Msa0843280-mRNA-1
chr5_4 CDS 20957900 20958051 20957900 ID=Msa0843280-mRNA-1:cds;Parent=Msa0843280-mRNA-1
chr5_4 CDS 20958172 20958310 20958172 ID=Msa0843280-mRNA-1:cds;Parent=Msa0843280-mRNA-1
chr5_4 three_prime_UTR 20958311 20958412 20958311 ID=Msa0843280-mRNA-1:three_prime_utr;Parent=Msa0843280-mRNA-1
Gene Sequence

>Msa0843280

ATGGGGTTGATTGTCATTTTATACCAGGCAATAGCTGCAATAGGGATTCGATACTTGTTACAAACATGGTGCGTGCAAAGAGCTGGTCCTCTATTTTGTGCTATGTTTAAGCCGATCGGAATCATCTTCACCGTTTTCTTGGGTTCAATTTTTCTAGGAGATGACTTTTATCTTGGAAGTTTGATTGGTGCTGTTATAATCGTGGTAGGATTTTATGCCGTGCAATGGGGCAAAGCTTCAGAAGAAAAGGTTGGGAAAGGGATTCAAAACTTAGAGACACAGTCCAATGTTGTTCCATTGTTACAAAACAAAGTATAA
Protein sequence

>Msa0843280

MGLIVILYQAIAAIGIRYLLQTWCVQRAGPLFCAMFKPIGIIFTVFLGSIFLGDDFYLGSLIGAVIIVVGFYAVQWGKASEEKVGKGIQNLETQSNVVPLLQNKV*