Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0267660 | XP_003589197.1 | 77.889 | 597 | 64 | 5 | 547 | 1076 | 1 | 596 | 0.0 | 906 |
Msa0267660 | XP_003589197.1 | 84.524 | 588 | 46 | 7 | 1 | 547 | 1 | 584 | 0.0 | 950 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0267660 | sp|Q8GWW4|GUX2_ARATH | 56.110 | 581 | 202 | 11 | 13 | 547 | 11 | 584 | 0.0 | 637 |
Msa0267660 | sp|Q8GWW4|GUX2_ARATH | 54.437 | 586 | 197 | 9 | 559 | 1075 | 11 | 595 | 0.0 | 634 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0267660 | G7I3L2 | 76.061 | 589 | 90 | 8 | 1 | 547 | 1 | 580 | 0.0 | 848 |
Msa0267660 | G7I3L2 | 81.926 | 592 | 45 | 4 | 547 | 1076 | 1 | 592 | 0.0 | 949 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0174450 | Msa0267660 | 0.810977 | 8.813010e-51 | -8.615850e-47 |
Msa0267660 | Msa0319940 | 0.807237 | 5.575858e-50 | -8.615850e-47 |
Msa0267660 | Msa0392380 | 0.840685 | 7.492248e-58 | -8.615850e-47 |
Msa0267660 | Msa0440320 | 0.844344 | 8.012386e-59 | -8.615850e-47 |
Msa0267660 | Msa0487500 | 0.852834 | 3.559866e-61 | -8.615850e-47 |
Msa0267660 | Msa1078930 | 0.818750 | 1.665501e-52 | -8.615850e-47 |
Msa0267660 | Msa1169230 | 0.801579 | 8.423155e-49 | -8.615850e-47 |
Msa0267660 | Msa1426070 | 0.812275 | 4.601135e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0267660 | MtrunA17_Chr1g0153481 | 84.524 | 588 | 46 | 7 | 1 | 547 | 1 | 584 | 0.0 | 950 |
Msa0267660 | MtrunA17_Chr1g0153481 | 77.889 | 597 | 64 | 5 | 547 | 1076 | 1 | 596 | 0.0 | 906 |
Msa0267660 | MtrunA17_Chr1g0153471 | 81.926 | 592 | 45 | 4 | 547 | 1076 | 1 | 592 | 0.0 | 949 |
Msa0267660 | MtrunA17_Chr1g0153471 | 76.061 | 589 | 90 | 8 | 1 | 547 | 1 | 580 | 0.0 | 848 |
Msa0267660 | MtrunA17_Chr1g0159301 | 40.966 | 476 | 213 | 8 | 652 | 1068 | 135 | 601 | 7.92e-116 | 372 |
Msa0267660 | MtrunA17_Chr1g0159301 | 41.372 | 481 | 225 | 11 | 106 | 547 | 135 | 597 | 3.38e-111 | 360 |
Msa0267660 | MtrunA17_Chr7g0272921 | 38.000 | 500 | 220 | 8 | 649 | 1068 | 66 | 555 | 6.53e-109 | 350 |
Msa0267660 | MtrunA17_Chr7g0272921 | 38.784 | 477 | 222 | 10 | 125 | 547 | 91 | 551 | 6.31e-103 | 335 |
Msa0267660 | MtrunA17_Chr3g0129911 | 40.244 | 492 | 232 | 14 | 106 | 556 | 128 | 598 | 3.47e-106 | 346 |
Msa0267660 | MtrunA17_Chr3g0129911 | 39.121 | 478 | 218 | 10 | 652 | 1068 | 128 | 593 | 6.52e-106 | 345 |
Msa0267660 | MtrunA17_Chr1g0191821 | 38.189 | 508 | 225 | 10 | 641 | 1068 | 50 | 548 | 7.18e-106 | 342 |
Msa0267660 | MtrunA17_Chr1g0191821 | 40.281 | 499 | 234 | 12 | 102 | 547 | 57 | 544 | 7.40e-100 | 326 |
Msa0267660 | MtrunA17_Chr1g0190421 | 38.554 | 83 | 51 | 0 | 352 | 434 | 104 | 186 | 1.08e-13 | 75.1 |
Msa0267660 | MtrunA17_Chr7g0274421 | 36.145 | 83 | 53 | 0 | 352 | 434 | 113 | 195 | 2.29e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0267660 | AT4G33330.2 | 56.110 | 581 | 202 | 11 | 13 | 547 | 11 | 584 | 0.0 | 637 |
Msa0267660 | AT4G33330.2 | 54.750 | 579 | 192 | 9 | 559 | 1068 | 11 | 588 | 0.0 | 632 |
Msa0267660 | AT4G33330.4 | 56.110 | 581 | 202 | 11 | 13 | 547 | 22 | 595 | 0.0 | 637 |
Msa0267660 | AT4G33330.4 | 54.437 | 586 | 197 | 9 | 559 | 1075 | 22 | 606 | 0.0 | 634 |
Msa0267660 | AT4G33330.1 | 56.110 | 581 | 202 | 11 | 13 | 547 | 11 | 584 | 0.0 | 637 |
Msa0267660 | AT4G33330.1 | 54.437 | 586 | 197 | 9 | 559 | 1075 | 11 | 595 | 0.0 | 634 |
Msa0267660 | AT4G33330.5 | 58.929 | 504 | 155 | 10 | 89 | 547 | 20 | 516 | 0.0 | 585 |
Msa0267660 | AT4G33330.5 | 55.985 | 518 | 159 | 8 | 626 | 1075 | 11 | 527 | 0.0 | 578 |
Msa0267660 | AT4G33330.3 | 53.422 | 453 | 167 | 10 | 13 | 428 | 22 | 467 | 7.65e-149 | 452 |
Msa0267660 | AT4G33330.3 | 49.664 | 447 | 155 | 9 | 559 | 936 | 22 | 467 | 1.76e-134 | 415 |
Msa0267660 | AT3G18660.3 | 38.650 | 489 | 227 | 9 | 644 | 1068 | 126 | 605 | 7.29e-111 | 359 |
Msa0267660 | AT3G18660.3 | 40.081 | 494 | 234 | 11 | 98 | 547 | 126 | 601 | 1.44e-109 | 356 |
Msa0267660 | AT3G18660.1 | 38.650 | 489 | 227 | 9 | 644 | 1068 | 127 | 606 | 9.22e-111 | 359 |
Msa0267660 | AT3G18660.1 | 40.081 | 494 | 234 | 11 | 98 | 547 | 127 | 602 | 1.73e-109 | 355 |
Msa0267660 | AT1G77130.1 | 38.912 | 478 | 222 | 10 | 652 | 1068 | 106 | 574 | 1.41e-110 | 357 |
Msa0267660 | AT1G77130.1 | 38.431 | 510 | 241 | 11 | 106 | 573 | 106 | 584 | 8.77e-109 | 352 |
Msa0267660 | AT3G18660.2 | 38.650 | 489 | 227 | 9 | 644 | 1068 | 131 | 610 | 1.84e-110 | 358 |
Msa0267660 | AT3G18660.2 | 40.081 | 494 | 234 | 11 | 98 | 547 | 131 | 606 | 3.10e-109 | 355 |
Msa0267660 | AT1G08990.1 | 37.751 | 498 | 230 | 8 | 648 | 1073 | 75 | 564 | 2.80e-105 | 342 |
Msa0267660 | AT1G08990.1 | 38.384 | 495 | 242 | 12 | 102 | 547 | 75 | 555 | 2.88e-100 | 328 |
Msa0267660 | AT1G54940.1 | 37.400 | 500 | 227 | 9 | 648 | 1074 | 70 | 556 | 6.56e-101 | 329 |
Msa0267660 | AT1G54940.1 | 38.538 | 506 | 243 | 14 | 102 | 557 | 70 | 557 | 9.25e-97 | 318 |
Msa0267660 | AT5G18480.1 | 37.349 | 83 | 52 | 0 | 352 | 434 | 109 | 191 | 9.78e-14 | 75.9 |
Find 222 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAATAGTTTACTCTTCT+TGG | 0.139993 | 2_2:-69361227 | None:intergenic |
TTTAAATAGTTTACTCTTCT+TGG | 0.139993 | 2_2:-69365324 | None:intergenic |
AGCAAATATGGTTGTGAAAA+AGG | 0.166021 | 2_2:+69359276 | Msa0267660:CDS |
CTGCTCTCGGGTTTCGGATT+CGG | 0.167042 | 2_2:-69360710 | None:intergenic |
AATTGCTTTACTTATATTTC+AGG | 0.178639 | 2_2:-69358243 | None:intergenic |
GCCTGTTGGGTCTTGCAATT+TGG | 0.190414 | 2_2:+69359453 | Msa0267660:CDS |
GATACTTTGTCGAAATTAAT+TGG | 0.214953 | 2_2:-69359052 | None:intergenic |
GCAATTTGGCTTTGCCTCTA+TGG | 0.215532 | 2_2:+69359467 | Msa0267660:CDS |
ATCTTAGTTCCATTCTTCTT+TGG | 0.230702 | 2_2:-69358917 | None:intergenic |
GATGCTTTATCGAAATTAAT+TGG | 0.234271 | 2_2:-69363850 | None:intergenic |
ATCGGTAAAGAAATGAAAAT+TGG | 0.238245 | 2_2:+69363766 | Msa0267660:CDS |
TGCTCTCGGGTTTCGGATTC+GGG | 0.241355 | 2_2:-69360709 | None:intergenic |
TCATCTTATTGTAGCAAATA+TGG | 0.245549 | 2_2:+69364062 | Msa0267660:CDS |
GAATCCCTCTTTCATAAATT+AGG | 0.247383 | 2_2:-69358422 | None:intergenic |
CCATCTTATTGTAGCAAATA+TGG | 0.252861 | 2_2:+69359264 | Msa0267660:CDS |
GTAGTTTAGCTTTGCCTATA+TGG | 0.255326 | 2_2:+69364265 | Msa0267660:CDS |
ATTGGTAAAGGAATGAAAAT+TGG | 0.256721 | 2_2:+69358968 | Msa0267660:CDS |
CATCATCCCAGCGTTGAAAA+TGG | 0.271862 | 2_2:-69365064 | None:intergenic |
AACGTAGGACTGAGTTAAAT+TGG | 0.272399 | 2_2:+69361495 | Msa0267660:CDS |
ATAATATTGCACTTTCAAAA+TGG | 0.275123 | 2_2:+69358496 | Msa0267660:exon |
TCAAACTTGTAGGGAGAAAA+AGG | 0.280784 | 2_2:+69363640 | Msa0267660:intron |
GAATCGGACCACCAAAGTTT+TGG | 0.301413 | 2_2:-69363242 | None:intergenic |
AGAAATAACAGTGCCTAAAA+TGG | 0.303356 | 2_2:-69358470 | None:intergenic |
CATTTGTCCTTAGACAATAT+TGG | 0.306482 | 2_2:-69358283 | None:intergenic |
CTATATGCTATTCACTATCT+TGG | 0.308766 | 2_2:+69361320 | Msa0267660:CDS |
AAATTCTGGCATTGGTAATT+CGG | 0.310582 | 2_2:-69359149 | None:intergenic |
TTCTTCTTCGTCGATCCATT+CGG | 0.312431 | 2_2:-69359104 | None:intergenic |
TTCTTCTTCGTCGATCCATT+CGG | 0.312431 | 2_2:-69363902 | None:intergenic |
TATTGGAGATTGGAACAAAA+TGG | 0.312883 | 2_2:-69358266 | None:intergenic |
AGTATACGACATAACCAAAA+TGG | 0.318207 | 2_2:+69360473 | Msa0267660:CDS |
CCAATCTCCAATATTGTCTA+AGG | 0.323950 | 2_2:+69358276 | Msa0267660:five_prime_UTR |
GACAAATGGAGCTATATAAA+TGG | 0.326291 | 2_2:+69358298 | Msa0267660:five_prime_UTR |
TCTTCTTCGTCGATCCATTC+GGG | 0.329696 | 2_2:-69359103 | None:intergenic |
TCTTCTTCGTCGATCCATTC+GGG | 0.329696 | 2_2:-69363901 | None:intergenic |
CGAAACCCGAGAGCAGAAAA+TGG | 0.329727 | 2_2:+69360717 | Msa0267660:CDS |
GGAAGAGTAGAGTTGTGTTT+TGG | 0.333942 | 2_2:+69364115 | Msa0267660:CDS |
CGGGTTTCGGATTCGGGTGA+TGG | 0.335335 | 2_2:-69360703 | None:intergenic |
ACGTAGGACTGAGTTAAATA+TGG | 0.349414 | 2_2:+69365593 | Msa0267660:CDS |
CTGCCAATGCACGGCGTTTG+CGG | 0.359937 | 2_2:-69360659 | None:intergenic |
CAGAAAGTTTCTTTGCCAAT+TGG | 0.363206 | 2_2:+69364237 | Msa0267660:CDS |
CATGATGCCAGAGTTGAAAA+TGG | 0.363410 | 2_2:-69360892 | None:intergenic |
AGAAAATTTCTTTGCCTGTT+GGG | 0.364645 | 2_2:+69359440 | Msa0267660:CDS |
CAATTTGGCTTTGCCTCTAT+GGG | 0.366369 | 2_2:+69359468 | Msa0267660:CDS |
TGAGGTTGATGTAAAGAGAT+TGG | 0.366927 | 2_2:+69364212 | Msa0267660:CDS |
TGAAGTTGATGTAAAGAAGT+TGG | 0.369288 | 2_2:+69359414 | Msa0267660:CDS |
TGGCTTAAGTAGCAAGGATT+AGG | 0.374369 | 2_2:-69358373 | None:intergenic |
GAATCTCATAATCAAAGCTT+TGG | 0.374742 | 2_2:-69358558 | None:intergenic |
ATAGAGACTATGATTGCAAT+TGG | 0.376794 | 2_2:+69361363 | Msa0267660:intron |
ATAGAGACTATGATTGCAAT+TGG | 0.376794 | 2_2:+69365460 | Msa0267660:CDS |
AGCCTTCCAATTGCACCTTC+AGG | 0.377638 | 2_2:+69360922 | Msa0267660:CDS |
AAAAGAGAGTCAGAATTTCT+AGG | 0.381609 | 2_2:-69365678 | None:intergenic |
TCTTCTCCGTCCTTCTTCTT+CGG | 0.382394 | 2_2:+69358625 | Msa0267660:CDS |
TGGGATCACTTGATTATCAT+TGG | 0.383578 | 2_2:+69361540 | Msa0267660:CDS |
TGGGATCACTTGATTATCAT+TGG | 0.383578 | 2_2:+69365637 | Msa0267660:CDS |
CGCAAACGCCGTGCATTGGC+AGG | 0.384275 | 2_2:+69360660 | Msa0267660:CDS |
TCTTCTCCGTCTGCCTTCTT+CGG | 0.384334 | 2_2:+69363309 | Msa0267660:CDS |
AAACTACCTGAAGGTGCAAT+TGG | 0.390400 | 2_2:-69360928 | None:intergenic |
GGAAGAGCAAGGTTGTGTTT+TGG | 0.391046 | 2_2:+69359317 | Msa0267660:CDS |
TTACCTGAAGGTGCAATTAG+AGG | 0.399863 | 2_2:-69365097 | None:intergenic |
AATTCTGGCATTGGTAATTC+GGG | 0.401126 | 2_2:-69359148 | None:intergenic |
TAGTGAATAGCATATAGTTT+TGG | 0.401182 | 2_2:-69361314 | None:intergenic |
TAGTGAATAGCATATAGTTT+TGG | 0.401182 | 2_2:-69365411 | None:intergenic |
GCAAATATGGTTGTGAAGAA+AGG | 0.401191 | 2_2:+69364075 | Msa0267660:CDS |
CCTTAGACAATATTGGAGAT+TGG | 0.411101 | 2_2:-69358276 | None:intergenic |
GATAGTGCAGCCTCACTTGT+TGG | 0.413451 | 2_2:+69363340 | Msa0267660:CDS |
TAGTTTAGCTTTGCCTATAT+GGG | 0.415460 | 2_2:+69364266 | Msa0267660:CDS |
AGCCCTCTAATTGCACCTTC+AGG | 0.419426 | 2_2:+69365094 | Msa0267660:CDS |
TGTTTCAAATCTTCATAAGT+TGG | 0.423984 | 2_2:+69358520 | Msa0267660:CDS |
CAGAAAATTTCTTTGCCTGT+TGG | 0.425692 | 2_2:+69359439 | Msa0267660:CDS |
AGGGGAAGAAAGATTGGAAA+TGG | 0.435577 | 2_2:+69359296 | Msa0267660:CDS |
ACTACCTTGGTTTGAAACCT+TGG | 0.436528 | 2_2:+69365430 | Msa0267660:CDS |
AAGAAGGCAGACGGAGAAGA+AGG | 0.440509 | 2_2:-69363306 | None:intergenic |
ATTCCTCAGCACAAAGATAT+CGG | 0.443301 | 2_2:-69364989 | None:intergenic |
AAGAAGAAGGACGGAGAAGA+AGG | 0.443972 | 2_2:-69358622 | None:intergenic |
CAATATTGTCTAAGGACAAA+TGG | 0.446228 | 2_2:+69358284 | Msa0267660:five_prime_UTR |
AAGGAGAAGATCTAGTAAGA+TGG | 0.452636 | 2_2:+69365617 | Msa0267660:CDS |
CGCCGTGCATTGGCAGGTGC+CGG | 0.453053 | 2_2:+69360666 | Msa0267660:CDS |
TATGTTGCAAATTCTGGCAT+TGG | 0.454598 | 2_2:-69359157 | None:intergenic |
GCCAAATTGCAAGACCCAAC+AGG | 0.456241 | 2_2:-69359454 | None:intergenic |
GAGAAGTATAAGGTCACGTT+TGG | 0.457875 | 2_2:-69364788 | None:intergenic |
GTGGAAATTTCATGATAGAA+TGG | 0.458602 | 2_2:+69365533 | Msa0267660:CDS |
GAATTCTGGCATTGGTAACT+CGG | 0.459806 | 2_2:-69363947 | None:intergenic |
CTATATGCTATTCACTACCT+TGG | 0.461805 | 2_2:+69365417 | Msa0267660:CDS |
AAGGAGAAGATCATATAAGA+TGG | 0.465038 | 2_2:+69361520 | Msa0267660:CDS |
ACTTGCTTCTACTGTTGTGT+TGG | 0.466267 | 2_2:-69361261 | None:intergenic |
TCATACAATGGAGGTGATCA+AGG | 0.468416 | 2_2:+69361167 | Msa0267660:CDS |
AACATACCTTGTTCCCATAT+AGG | 0.468501 | 2_2:-69364279 | None:intergenic |
CCGCCAAGGCATGACGTTTG+CGG | 0.468698 | 2_2:-69364831 | None:intergenic |
ACTTGCTTCTACTGTTGTGT+TGG | 0.470999 | 2_2:-69365358 | None:intergenic |
TGGTTAAACATGAAGGTGAT+TGG | 0.476507 | 2_2:+69364181 | Msa0267660:CDS |
TGTTTCAAATGTTAATAAGT+TGG | 0.479446 | 2_2:+69363204 | Msa0267660:CDS |
AATCAGTAAGTTGCCACAAC+CGG | 0.480734 | 2_2:-69360770 | None:intergenic |
TCATGGAGGCCAAAGACAAA+TGG | 0.482348 | 2_2:+69363706 | Msa0267660:CDS |
CATGAATCCTTGGTCACCTC+CGG | 0.483263 | 2_2:-69365271 | None:intergenic |
CACATCCTAATTTATGAAAG+AGG | 0.484989 | 2_2:+69358417 | Msa0267660:five_prime_UTR |
TCCTCAGAAAGCTACGTTTG+TGG | 0.485128 | 2_2:+69360555 | Msa0267660:CDS |
CGTCCGCAAACGCCGTGCAT+TGG | 0.485600 | 2_2:+69360656 | Msa0267660:CDS |
TTCCCAGTGGCAGACATTTG+AGG | 0.486184 | 2_2:-69360861 | None:intergenic |
AGCTGTCAATGAGAAGTATA+AGG | 0.486876 | 2_2:-69364798 | None:intergenic |
TTGGGATGTGGTGGATCAAA+GGG | 0.488629 | 2_2:+69361382 | Msa0267660:CDS |
TCGAAATAGACCGAAGAAGA+AGG | 0.488721 | 2_2:-69358635 | None:intergenic |
TTTCCTCAAATGTCTGCCAC+TGG | 0.488899 | 2_2:+69360858 | Msa0267660:CDS |
TCAAGGAATCCAAAGAAGAA+TGG | 0.492637 | 2_2:+69358908 | Msa0267660:CDS |
AGATCTCGTTCATGAATCCT+TGG | 0.496911 | 2_2:-69365281 | None:intergenic |
CAAATATGGTTGTGAAGAAA+GGG | 0.496943 | 2_2:+69364076 | Msa0267660:CDS |
ACGTAGGACTGAGTTAAATT+GGG | 0.497924 | 2_2:+69361496 | Msa0267660:CDS |
TGCATAAACAATGAGAAAGA+TGG | 0.505600 | 2_2:-69358597 | None:intergenic |
GATGGTTCGAATCTGCCAAC+CGG | 0.507919 | 2_2:-69360685 | None:intergenic |
TTTCCTCAAATGTCTGCTAC+TGG | 0.509517 | 2_2:+69365030 | Msa0267660:CDS |
GCTAAACTACACGAACCAAT+TGG | 0.509599 | 2_2:-69364252 | None:intergenic |
ATTATAGTAAGTTCCGGTTG+TGG | 0.510136 | 2_2:+69360757 | Msa0267660:intron |
GAGAGCACCATCCAAAACTT+TGG | 0.511607 | 2_2:+69363231 | Msa0267660:CDS |
CAAAACAGAACAAATTGAAT+CGG | 0.513629 | 2_2:-69363258 | None:intergenic |
CGTCCGCAAACGTCATGCCT+TGG | 0.514633 | 2_2:+69364828 | Msa0267660:CDS |
AGGAGAAGATCTAGTAAGAT+GGG | 0.515554 | 2_2:+69365618 | Msa0267660:CDS |
GTGCATTGGCAGGTGCCGGT+TGG | 0.516239 | 2_2:+69360670 | Msa0267660:CDS |
GAGTAAATGTAGACCAATGT+TGG | 0.519399 | 2_2:+69359339 | Msa0267660:CDS |
GAGTAAGTGTAGACCAATGT+TGG | 0.521320 | 2_2:+69364137 | Msa0267660:CDS |
TTACCAGTAGCAGACATTTG+AGG | 0.522222 | 2_2:-69365033 | None:intergenic |
CCATATTTGCTACAATAAGA+TGG | 0.523620 | 2_2:-69359264 | None:intergenic |
TGCATAAACAATCAGAAAGA+TGG | 0.524099 | 2_2:-69363281 | None:intergenic |
ACATCCTAATTTATGAAAGA+GGG | 0.526934 | 2_2:+69358418 | Msa0267660:five_prime_UTR |
AATTACCAAAAGCAAAATCA+AGG | 0.531008 | 2_2:+69358891 | Msa0267660:CDS |
CTATCAAAATAGACCGAAGA+AGG | 0.532085 | 2_2:-69363322 | None:intergenic |
TTGGGATGTAGTGGATCAAA+GGG | 0.532969 | 2_2:+69365479 | Msa0267660:CDS |
AACCGGCACCTGCCAATGCA+CGG | 0.534207 | 2_2:-69360668 | None:intergenic |
ATGATACAATGTCGTGGCGC+AGG | 0.535881 | 2_2:-69365245 | None:intergenic |
TAGTAGTTAAATATGAGGAT+TGG | 0.535963 | 2_2:-69358393 | None:intergenic |
AGATCTTTGTATGGTGGCAT+AGG | 0.536864 | 2_2:+69365298 | Msa0267660:CDS |
TCATGAACGAGATCTTTGTA+TGG | 0.537659 | 2_2:+69365289 | Msa0267660:CDS |
AGATATTTGTGTGGTGGCAT+AGG | 0.538218 | 2_2:+69361201 | Msa0267660:CDS |
CGTCATGCCTTGGCGGACGC+AGG | 0.542261 | 2_2:+69364838 | Msa0267660:CDS |
TAGAGACTATGATTGCAATT+GGG | 0.542540 | 2_2:+69361364 | Msa0267660:intron |
TAGAGACTATGATTGCAATT+GGG | 0.542540 | 2_2:+69365461 | Msa0267660:CDS |
CCGCAAACGTCATGCCTTGG+CGG | 0.543394 | 2_2:+69364831 | Msa0267660:CDS |
TACATACCTTGTTCCCATAG+AGG | 0.546595 | 2_2:-69359481 | None:intergenic |
AATGTAGTGTGCTTATGAGC+CGG | 0.546965 | 2_2:+69361129 | Msa0267660:intron |
GGACAGATTTATTTCCCGAA+TGG | 0.547391 | 2_2:+69359089 | Msa0267660:CDS |
GGACAGATTTATTTCCCGAA+TGG | 0.547391 | 2_2:+69363887 | Msa0267660:CDS |
TGTGTTAGTAGTTAAATATG+AGG | 0.548577 | 2_2:-69358398 | None:intergenic |
CAATGCACGGCGTTTGCGGA+CGG | 0.551035 | 2_2:-69360655 | None:intergenic |
ATGACGTTTGCGGACGGAGA+TGG | 0.554231 | 2_2:-69364821 | None:intergenic |
CTCATAATCAAAGCTTTGGA+TGG | 0.554858 | 2_2:-69358554 | None:intergenic |
GAAAATTGGAACGGTGAACA+TGG | 0.554949 | 2_2:+69358982 | Msa0267660:CDS |
TTCCTCAAATGTCTGCCACT+GGG | 0.556230 | 2_2:+69360859 | Msa0267660:CDS |
ATGATACGATGTCGTGGCGC+CGG | 0.559176 | 2_2:-69361148 | None:intergenic |
TAAAGAAATGAAAATTGGAA+TGG | 0.560071 | 2_2:+69363771 | Msa0267660:CDS |
TATGTTGTGAATTCTGGCAT+TGG | 0.561815 | 2_2:-69363955 | None:intergenic |
ACGGCGTTTGCGGACGGAGA+TGG | 0.562657 | 2_2:-69360649 | None:intergenic |
TCTTCAGAAAGATACGTTTG+TGG | 0.563011 | 2_2:+69364727 | Msa0267660:CDS |
TACCTGAAGGTGCAATTGGA+AGG | 0.563682 | 2_2:-69360924 | None:intergenic |
AGGAGAAGATCATATAAGAT+GGG | 0.564899 | 2_2:+69361521 | Msa0267660:CDS |
CGGCTCACCTTACCTTGTGA+TGG | 0.566141 | 2_2:-69358697 | None:intergenic |
TACCTGAAGGTGCAATTAGA+GGG | 0.566381 | 2_2:-69365096 | None:intergenic |
ATTGGGATGTGGTGGATCAA+AGG | 0.566589 | 2_2:+69361381 | Msa0267660:CDS |
ATTGGGATGTAGTGGATCAA+AGG | 0.569835 | 2_2:+69365478 | Msa0267660:CDS |
AAGATGACGACATAAGTGAA+TGG | 0.573228 | 2_2:+69363806 | Msa0267660:CDS |
GCTTTGCCTCTATGGGAACA+AGG | 0.576091 | 2_2:+69359475 | Msa0267660:CDS |
AATAACAGTGCCTAAAATGG+AGG | 0.579448 | 2_2:-69358467 | None:intergenic |
ATTGGTAATTCGGGACATGT+TGG | 0.586011 | 2_2:-69359139 | None:intergenic |
CGTATCTTTCTGAAGAGTGT+AGG | 0.589313 | 2_2:-69364720 | None:intergenic |
TCCACAAACGTAGCTTTCTG+AGG | 0.592719 | 2_2:-69360556 | None:intergenic |
CTTCCAACCTGCGTCCGCCA+AGG | 0.594413 | 2_2:-69364845 | None:intergenic |
CTATGATTGCAATTGGGATG+TGG | 0.594980 | 2_2:+69361370 | Msa0267660:CDS |
AGAAGAAGGACGGAGAAGAA+GGG | 0.596920 | 2_2:-69358621 | None:intergenic |
AAGACGATGATGTAAGCGAA+TGG | 0.598071 | 2_2:+69359008 | Msa0267660:CDS |
CAAGGCATGACGTTTGCGGA+CGG | 0.600005 | 2_2:-69364827 | None:intergenic |
GCTTTGCCTATATGGGAACA+AGG | 0.600956 | 2_2:+69364273 | Msa0267660:CDS |
AATTCTGGCATTGGTAACTC+GGG | 0.601092 | 2_2:-69363946 | None:intergenic |
ATTGGTAACTCGGGACATGT+TGG | 0.601217 | 2_2:-69363937 | None:intergenic |
AGAGTGTAGGACTGTTGCAT+AGG | 0.602334 | 2_2:-69364707 | None:intergenic |
GGACTGAGTTAAATTGGGAA+AGG | 0.602408 | 2_2:+69361501 | Msa0267660:CDS |
AGCACCATCCAAAACTTTGG+TGG | 0.603780 | 2_2:+69363234 | Msa0267660:CDS |
TGATTGCAATTGGGATGTAG+TGG | 0.604309 | 2_2:+69365470 | Msa0267660:CDS |
AGGCTCGCTTTACCTTGTGA+TGG | 0.604663 | 2_2:-69363381 | None:intergenic |
GATGATTTGGTTAAACATGA+AGG | 0.605109 | 2_2:+69364174 | Msa0267660:CDS |
AGAAGGCAGACGGAGAAGAA+GGG | 0.606306 | 2_2:-69363305 | None:intergenic |
ATAACAGTGCCTAAAATGGA+GGG | 0.606437 | 2_2:-69358466 | None:intergenic |
GGACTGAGTTAAATATGGAA+AGG | 0.607350 | 2_2:+69365598 | Msa0267660:CDS |
TGAACGAGATCTTTGTATGG+TGG | 0.608114 | 2_2:+69365292 | Msa0267660:CDS |
AAAACGTAAGAAGCAAAACA+AGG | 0.612257 | 2_2:+69360499 | Msa0267660:CDS |
ATTTGCAACATATGAAAACA+TGG | 0.614599 | 2_2:+69359168 | Msa0267660:CDS |
GAGGATTGGCTTAAGTAGCA+AGG | 0.615905 | 2_2:-69358379 | None:intergenic |
TAAAGGAATGAAAATTGGAA+CGG | 0.617814 | 2_2:+69358973 | Msa0267660:CDS |
ATGTGGCACACCAACGTTGG+TGG | 0.618509 | 2_2:+69361417 | Msa0267660:CDS |
ATGTGGCACACCAACGTTGG+TGG | 0.618509 | 2_2:+69365514 | Msa0267660:CDS |
TTAAACATGAAGGTGATTGG+TGG | 0.621017 | 2_2:+69364184 | Msa0267660:CDS |
ATAAGTGAATGGAACATACA+TGG | 0.621602 | 2_2:+69363817 | Msa0267660:CDS |
GTAAGCGAATGGAACATACA+TGG | 0.622116 | 2_2:+69359019 | Msa0267660:CDS |
TCATACACCGGAGGTGACCA+AGG | 0.624983 | 2_2:+69365264 | Msa0267660:CDS |
TAAATGAGATATTTGTGTGG+TGG | 0.628179 | 2_2:+69361195 | Msa0267660:CDS |
CGGTGTATGATACAATGTCG+TGG | 0.628381 | 2_2:-69365251 | None:intergenic |
ATTCTGATATTCTTGTGCTG+AGG | 0.637140 | 2_2:+69360814 | Msa0267660:CDS |
TGATTGCAATTGGGATGTGG+TGG | 0.639281 | 2_2:+69361373 | Msa0267660:CDS |
TAACAGTGCCTAAAATGGAG+GGG | 0.639443 | 2_2:-69358465 | None:intergenic |
ATTCACAACATATGAAAACA+TGG | 0.640097 | 2_2:+69363966 | Msa0267660:CDS |
CAAAGAGCATCCAACAAGTG+AGG | 0.640528 | 2_2:-69363350 | None:intergenic |
ACTCCGATATCTTTGTGCTG+AGG | 0.640952 | 2_2:+69364986 | Msa0267660:CDS |
AATAGACCGAAGAAGGCAGA+CGG | 0.645935 | 2_2:-69363315 | None:intergenic |
AATGCCAAGGTTTCAAACCA+AGG | 0.646436 | 2_2:-69365434 | None:intergenic |
CATGAAATTTCCACCAACGT+TGG | 0.647370 | 2_2:-69365524 | None:intergenic |
CATACAATGGAGGTGATCAA+GGG | 0.650143 | 2_2:+69361168 | Msa0267660:CDS |
TAGTCTCTATAGCAATGCCA+AGG | 0.650829 | 2_2:-69365447 | None:intergenic |
AAGGGTTTATGCTAGTGATG+TGG | 0.656120 | 2_2:+69365497 | Msa0267660:CDS |
AAGGGTTTATGCAAGTGATG+TGG | 0.658917 | 2_2:+69361400 | Msa0267660:CDS |
GTAGGTTGACAAAACAACGT+AGG | 0.659262 | 2_2:+69365577 | Msa0267660:CDS |
AGATTGGAAATGGAAGAGCA+AGG | 0.659375 | 2_2:+69359306 | Msa0267660:CDS |
CACGACATTGTATCATACAC+CGG | 0.662216 | 2_2:+69365252 | Msa0267660:CDS |
ATTGAGAGAATGCCATCACA+AGG | 0.668519 | 2_2:+69358685 | Msa0267660:CDS |
CATGAAAATTCCACCAACGT+TGG | 0.668874 | 2_2:-69361427 | None:intergenic |
CATTGTATGATACGATGTCG+TGG | 0.669688 | 2_2:-69361154 | None:intergenic |
TCTTAAATGAGATATTTGTG+TGG | 0.670162 | 2_2:+69361192 | Msa0267660:CDS |
AATAGACCGAAGAAGAAGGA+CGG | 0.670251 | 2_2:-69358631 | None:intergenic |
AAACGTAAGAAGCAAAACAA+GGG | 0.674319 | 2_2:+69360500 | Msa0267660:CDS |
TTTGAGAGAATGCCATCACA+AGG | 0.679517 | 2_2:+69363369 | Msa0267660:CDS |
GTAGGTTGACAAGACAACGT+AGG | 0.684481 | 2_2:+69361480 | Msa0267660:CDS |
CACGACATCGTATCATACAA+TGG | 0.691261 | 2_2:+69361155 | Msa0267660:CDS |
GTGATGTGGCACACCAACGT+TGG | 0.711051 | 2_2:+69361414 | Msa0267660:CDS |
GTGATGTGGCACACCAACGT+TGG | 0.727972 | 2_2:+69365511 | Msa0267660:CDS |
GACATTGTATCATACACCGG+AGG | 0.730549 | 2_2:+69365255 | Msa0267660:CDS |
GACATCGTATCATACAATGG+AGG | 0.748038 | 2_2:+69361158 | Msa0267660:CDS |
AATGGACTGATCATTCCCAG+TGG | 0.776213 | 2_2:-69360874 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATTAATTAAGAATTAAT+TGG | - | chr2_2:69359816-69359835 | None:intergenic | 10.0% |
!!! | AAATTTATTTTTTTAGACAA+AGG | - | chr2_2:69360363-69360382 | None:intergenic | 10.0% |
!!! | TAAACTATTTAAAGAATTTT+TGG | + | chr2_2:69361237-69361256 | Msa0267660:CDS | 10.0% |
!!! | AAACTATTTAAAGAATTTTT+GGG | + | chr2_2:69361238-69361257 | Msa0267660:CDS | 10.0% |
!! | AAGAAAAAAAAATTACATAA+AGG | - | chr2_2:69361644-69361663 | None:intergenic | 10.0% |
!!! | TAAACTATTTAAAGAATTTT+TGG | + | chr2_2:69361237-69361256 | Msa0267660:CDS | 10.0% |
!!! | ATTTTTCATTTAGAAATTGT+AGG | + | chr2_2:69358206-69358225 | Msa0267660:five_prime_UTR | 15.0% |
!! | AAAAATAGTAACAGTAAAAA+AGG | + | chr2_2:69359602-69359621 | Msa0267660:intron | 15.0% |
!!! | AACCAATAGTATTTTTTAAA+AGG | + | chr2_2:69359897-69359916 | Msa0267660:intron | 15.0% |
!!! | TTCCTTTTAAAAAATACTAT+TGG | - | chr2_2:69359902-69359921 | None:intergenic | 15.0% |
!! | TGATGAAAAATAATTTACAT+TGG | + | chr2_2:69360153-69360172 | Msa0267660:intron | 15.0% |
!! | AAAAATGTTATAATCTTTGT+TGG | + | chr2_2:69360253-69360272 | Msa0267660:intron | 15.0% |
!! | AATAATAGTATCAATACAAT+TGG | - | chr2_2:69360318-69360337 | None:intergenic | 15.0% |
!! | AAAATAATCTTAAAACTAGA+AGG | - | chr2_2:69361035-69361054 | None:intergenic | 15.0% |
!!! | GTTTTAAGATTATTTTTCTA+TGG | + | chr2_2:69361039-69361058 | Msa0267660:intron | 15.0% |
!! | TTACATAAAGGAAAAAAAAA+AGG | - | chr2_2:69361632-69361651 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | chr2_2:69362213-69362232 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | + | chr2_2:69362212-69362231 | Msa0267660:intron | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr2_2:69362236-69362255 | Msa0267660:intron | 15.0% |
!!! | CATTTTGAAACAAATTTTTT+TGG | + | chr2_2:69362339-69362358 | Msa0267660:intron | 15.0% |
!!! | TAGTTAGTTTTCTATTTTTA+CGG | - | chr2_2:69362514-69362533 | None:intergenic | 15.0% |
!! | TTGTAAAATTCAATTTACTT+TGG | - | chr2_2:69362595-69362614 | None:intergenic | 15.0% |
!! | AAACTATGGAAAAAAAAATA+TGG | - | chr2_2:69362734-69362753 | None:intergenic | 15.0% |
!! | ATATTATAGACTAAATTGAT+CGG | - | chr2_2:69363428-69363447 | None:intergenic | 15.0% |
!! | ATTAATTAAAAATTACCTGA+AGG | - | chr2_2:69365112-69365131 | None:intergenic | 15.0% |
!! | AATTGCTTTACTTATATTTC+AGG | - | chr2_2:69358246-69358265 | None:intergenic | 20.0% |
!!! | TTTTGAAAGTGCAATATTAT+AGG | - | chr2_2:69358496-69358515 | None:intergenic | 20.0% |
!! | ATAATATTGCACTTTCAAAA+TGG | + | chr2_2:69358496-69358515 | Msa0267660:exon | 20.0% |
!! | AAAAGATTTATTTCCATGTT+TGG | - | chr2_2:69358808-69358827 | None:intergenic | 20.0% |
!!! | CAATATTTTTTGCATTAAAG+TGG | + | chr2_2:69359512-69359531 | Msa0267660:intron | 20.0% |
!!! | AATTAATCTTTTCCTTTTAG+AGG | + | chr2_2:69359826-69359845 | Msa0267660:intron | 20.0% |
!! | AGTATAATTATAGTAAGTTC+CGG | + | chr2_2:69360751-69360770 | Msa0267660:intron | 20.0% |
!! | ATAAATTAAAAACTACCTGA+AGG | - | chr2_2:69360940-69360959 | None:intergenic | 20.0% |
!! | GTGTGTACAAAATAAATATA+AGG | + | chr2_2:69361072-69361091 | Msa0267660:intron | 20.0% |
!! | TTTAAATAGTTTACTCTTCT+TGG | - | chr2_2:69361230-69361249 | None:intergenic | 20.0% |
!! | AATATCATGTTAGACAAAAT+CGG | - | chr2_2:69362096-69362115 | None:intergenic | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | - | chr2_2:69362222-69362241 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | + | chr2_2:69362299-69362318 | Msa0267660:intron | 20.0% |
!! | TTGTCACTAAATATAAACTA+TGG | - | chr2_2:69362748-69362767 | None:intergenic | 20.0% |
!! | AATGAGTGTATAAAATTTAG+GGG | - | chr2_2:69362807-69362826 | None:intergenic | 20.0% |
!! | GAATGAGTGTATAAAATTTA+GGG | - | chr2_2:69362808-69362827 | None:intergenic | 20.0% |
!! | AGAATGAGTGTATAAAATTT+AGG | - | chr2_2:69362809-69362828 | None:intergenic | 20.0% |
!! | ATTTCTAAATCCAAAATGTT+TGG | - | chr2_2:69362881-69362900 | None:intergenic | 20.0% |
!! | TGTTTCAAATGTTAATAAGT+TGG | + | chr2_2:69363204-69363223 | Msa0267660:CDS | 20.0% |
!! | AATTTCAACGACTATATTAT+CGG | + | chr2_2:69363512-69363531 | Msa0267660:intron | 20.0% |
!! | CAAGAAAAAATGTACAAAAT+AGG | - | chr2_2:69363565-69363584 | None:intergenic | 20.0% |
!! | AATTACCAAATCAAAAATCA+TGG | + | chr2_2:69363689-69363708 | Msa0267660:CDS | 20.0% |
!! | TAAAGAAATGAAAATTGGAA+TGG | + | chr2_2:69363771-69363790 | Msa0267660:CDS | 20.0% |
!! | GGTATAATTATACTTATTGT+AGG | - | chr2_2:69364917-69364936 | None:intergenic | 20.0% |
!! | TTTAAATAGTTTACTCTTCT+TGG | - | chr2_2:69361230-69361249 | None:intergenic | 20.0% |
! | TAGTAGTTAAATATGAGGAT+TGG | - | chr2_2:69358396-69358415 | None:intergenic | 25.0% |
! | TGTGTTAGTAGTTAAATATG+AGG | - | chr2_2:69358401-69358420 | None:intergenic | 25.0% |
! | ACATCCTAATTTATGAAAGA+GGG | + | chr2_2:69358418-69358437 | Msa0267660:five_prime_UTR | 25.0% |
! | TGTTTCAAATCTTCATAAGT+TGG | + | chr2_2:69358520-69358539 | Msa0267660:CDS | 25.0% |
!!! | ATTTTAATGTGTACCAAACA+TGG | + | chr2_2:69358792-69358811 | Msa0267660:intron | 25.0% |
!!! | TTTTGGTAATTCCTCTAATA+CGG | - | chr2_2:69358882-69358901 | None:intergenic | 25.0% |
! | AATTACCAAAAGCAAAATCA+AGG | + | chr2_2:69358891-69358910 | Msa0267660:CDS | 25.0% |
!!! | ATAAAAGTACCAAGTTTTCT+AGG | + | chr2_2:69358938-69358957 | Msa0267660:intron | 25.0% |
! | ATTGGTAAAGGAATGAAAAT+TGG | + | chr2_2:69358968-69358987 | Msa0267660:CDS | 25.0% |
! | TAAAGGAATGAAAATTGGAA+CGG | + | chr2_2:69358973-69358992 | Msa0267660:CDS | 25.0% |
! | GATACTTTGTCGAAATTAAT+TGG | - | chr2_2:69359055-69359074 | None:intergenic | 25.0% |
!!! | AAGTATCACAATTTTTCAAC+TGG | + | chr2_2:69359068-69359087 | Msa0267660:CDS | 25.0% |
!! | TTTTCATATGTTGCAAATTC+TGG | - | chr2_2:69359166-69359185 | None:intergenic | 25.0% |
! | ATTTGCAACATATGAAAACA+TGG | + | chr2_2:69359168-69359187 | Msa0267660:CDS | 25.0% |
!!! | GATTTTTAGATGTGATGATT+TGG | + | chr2_2:69359363-69359382 | Msa0267660:CDS | 25.0% |
!!! | GATGATTTGGTTAAAAATGA+AGG | + | chr2_2:69359376-69359395 | Msa0267660:CDS | 25.0% |
!!! | TTGTTTTGTCAGCATTAATT+TGG | + | chr2_2:69360009-69360028 | Msa0267660:intron | 25.0% |
! | TTCTTAGAAAACAAGACTTT+GGG | - | chr2_2:69360090-69360109 | None:intergenic | 25.0% |
! | TTTCTTAGAAAACAAGACTT+TGG | - | chr2_2:69360091-69360110 | None:intergenic | 25.0% |
!!! | CTACTTGTTATTTGGTAATT+CGG | - | chr2_2:69360206-69360225 | None:intergenic | 25.0% |
!!! | TTTGAAAGCTACTTGTTATT+TGG | - | chr2_2:69360214-69360233 | None:intergenic | 25.0% |
!!! | AAAAATAGTGTTGATTTTGC+AGG | + | chr2_2:69360441-69360460 | Msa0267660:intron | 25.0% |
!!! | AAAATAGTGTTGATTTTGCA+GGG | + | chr2_2:69360442-69360461 | Msa0267660:intron | 25.0% |
! | ATAATCTTAAAACTAGAAGG+CGG | - | chr2_2:69361032-69361051 | None:intergenic | 25.0% |
! | TCTTAAATGAGATATTTGTG+TGG | + | chr2_2:69361192-69361211 | Msa0267660:CDS | 25.0% |
!! | TAGTGAATAGCATATAGTTT+TGG | - | chr2_2:69361317-69361336 | None:intergenic | 25.0% |
!! | AGAAGTTACAAAGTTTTTGT+AGG | + | chr2_2:69361462-69361481 | Msa0267660:CDS | 25.0% |
! | TACAAGATATATGGAGATTA+AGG | - | chr2_2:69361692-69361711 | None:intergenic | 25.0% |
! | ATGAATATGTCTATACCATA+CGG | - | chr2_2:69361719-69361738 | None:intergenic | 25.0% |
!! | TAGCTCGTATTACATATTTT+TGG | - | chr2_2:69361903-69361922 | None:intergenic | 25.0% |
!!! | CAAAGTTGGTAAAATTTAGT+GGG | - | chr2_2:69361944-69361963 | None:intergenic | 25.0% |
!!! | TCAAAGTTGGTAAAATTTAG+TGG | - | chr2_2:69361945-69361964 | None:intergenic | 25.0% |
! | ACTGAAGTATAAAAAAGTCA+TGG | - | chr2_2:69361973-69361992 | None:intergenic | 25.0% |
!!! | ATGACTTTTTTATACTTCAG+TGG | + | chr2_2:69361972-69361991 | Msa0267660:intron | 25.0% |
! | AATGATTAAGAGAAAGAGAA+TGG | + | chr2_2:69362179-69362198 | Msa0267660:intron | 25.0% |
! | TACCTTATCTTCTCTATATA+TGG | + | chr2_2:69362830-69362849 | Msa0267660:intron | 25.0% |
! | AATTGCCTTACTTATATTTC+AGG | - | chr2_2:69362930-69362949 | None:intergenic | 25.0% |
! | AATAGACAATATTGGACTTA+AGG | - | chr2_2:69362963-69362982 | None:intergenic | 25.0% |
!! | CCTTGTTTAATAGACAATAT+TGG | - | chr2_2:69362971-69362990 | None:intergenic | 25.0% |
! | CCAATATTGTCTATTAAACA+AGG | + | chr2_2:69362968-69362987 | Msa0267660:intron | 25.0% |
! | ATTGTCTATTAAACAAGGAA+AGG | + | chr2_2:69362973-69362992 | Msa0267660:intron | 25.0% |
! | ATTAAACAAGGAAAGGAAAA+TGG | + | chr2_2:69362980-69362999 | Msa0267660:intron | 25.0% |
! | TTTCTAATCTTTGCTACTAA+AGG | + | chr2_2:69363056-69363075 | Msa0267660:intron | 25.0% |
! | CAAAACAGAACAAATTGAAT+CGG | - | chr2_2:69363261-69363280 | None:intergenic | 25.0% |
! | CTAGAAAATTTAAGCGATAT+AGG | - | chr2_2:69363404-69363423 | None:intergenic | 25.0% |
!! | CTATATCGCTTAAATTTTCT+AGG | + | chr2_2:69363402-69363421 | Msa0267660:intron | 25.0% |
! | ACATACAAGATACATTTCTA+TGG | - | chr2_2:69363609-69363628 | None:intergenic | 25.0% |
!! | AAAAGGCATAAAAATGAAAG+CGG | + | chr2_2:69363657-69363676 | Msa0267660:CDS | 25.0% |
!!! | ATTTTAGTTCCATTTGTCTT+TGG | - | chr2_2:69363718-69363737 | None:intergenic | 25.0% |
!!! | ATAGAAGTACCAAGTTTTTT+AGG | + | chr2_2:69363736-69363755 | Msa0267660:intron | 25.0% |
! | ATTATTTCGCCTAAAAAACT+TGG | - | chr2_2:69363748-69363767 | None:intergenic | 25.0% |
!!! | AGTTTTTTAGGCGAAATAAT+CGG | + | chr2_2:69363748-69363767 | Msa0267660:intron | 25.0% |
! | ATCGGTAAAGAAATGAAAAT+TGG | + | chr2_2:69363766-69363785 | Msa0267660:CDS | 25.0% |
! | GATGCTTTATCGAAATTAAT+TGG | - | chr2_2:69363853-69363872 | None:intergenic | 25.0% |
!! | TTTTCATATGTTGTGAATTC+TGG | - | chr2_2:69363964-69363983 | None:intergenic | 25.0% |
! | ATTCACAACATATGAAAACA+TGG | + | chr2_2:69363966-69363985 | Msa0267660:CDS | 25.0% |
! | TCATCTTATTGTAGCAAATA+TGG | + | chr2_2:69364062-69364081 | Msa0267660:CDS | 25.0% |
!!! | GATTTTTAGATGTGATGATT+TGG | + | chr2_2:69359363-69359382 | Msa0267660:CDS | 25.0% |
!!! | AAAATAGTGTTGATTTTTGC+AGG | + | chr2_2:69364631-69364650 | Msa0267660:intron | 25.0% |
!!! | AAATAGTGTTGATTTTTGCA+GGG | + | chr2_2:69364632-69364651 | Msa0267660:intron | 25.0% |
! | AATCAAGTAATCCATTTATG+AGG | + | chr2_2:69365129-69365148 | Msa0267660:intron | 25.0% |
!!! | AGTGTGAAAAATGGATTATT+TGG | + | chr2_2:69365378-69365397 | Msa0267660:CDS | 25.0% |
!! | TAGTGAATAGCATATAGTTT+TGG | - | chr2_2:69361317-69361336 | None:intergenic | 25.0% |
!! | AGAAGTTACAAAGTTTTTGT+AGG | + | chr2_2:69361462-69361481 | Msa0267660:CDS | 25.0% |
TATTGGAGATTGGAACAAAA+TGG | - | chr2_2:69358269-69358288 | None:intergenic | 30.0% | |
CATTTGTCCTTAGACAATAT+TGG | - | chr2_2:69358286-69358305 | None:intergenic | 30.0% | |
CAATATTGTCTAAGGACAAA+TGG | + | chr2_2:69358284-69358303 | Msa0267660:five_prime_UTR | 30.0% | |
GACAAATGGAGCTATATAAA+TGG | + | chr2_2:69358298-69358317 | Msa0267660:five_prime_UTR | 30.0% | |
CACATCCTAATTTATGAAAG+AGG | + | chr2_2:69358417-69358436 | Msa0267660:five_prime_UTR | 30.0% | |
GAATCCCTCTTTCATAAATT+AGG | - | chr2_2:69358425-69358444 | None:intergenic | 30.0% | |
AGAAATAACAGTGCCTAAAA+TGG | - | chr2_2:69358473-69358492 | None:intergenic | 30.0% | |
GAATCTCATAATCAAAGCTT+TGG | - | chr2_2:69358561-69358580 | None:intergenic | 30.0% | |
TGCATAAACAATGAGAAAGA+TGG | - | chr2_2:69358600-69358619 | None:intergenic | 30.0% | |
AGAAGAAGATGAGAAAGAAA+GGG | - | chr2_2:69358741-69358760 | None:intergenic | 30.0% | |
AAAAATCAAAGCCGTATTAG+AGG | + | chr2_2:69358868-69358887 | Msa0267660:CDS | 30.0% | |
ATCTTAGTTCCATTCTTCTT+TGG | - | chr2_2:69358920-69358939 | None:intergenic | 30.0% | |
!!! | ATTTTTTCGCCTAGAAAACT+TGG | - | chr2_2:69358950-69358969 | None:intergenic | 30.0% |
! | AGTTTTCTAGGCGAAAAAAT+TGG | + | chr2_2:69358950-69358969 | Msa0267660:intron | 30.0% |
!! | AAATTCTGGCATTGGTAATT+CGG | - | chr2_2:69359152-69359171 | None:intergenic | 30.0% |
! | CCATATTTGCTACAATAAGA+TGG | - | chr2_2:69359267-69359286 | None:intergenic | 30.0% |
CCATCTTATTGTAGCAAATA+TGG | + | chr2_2:69359264-69359283 | Msa0267660:CDS | 30.0% | |
AGCAAATATGGTTGTGAAAA+AGG | + | chr2_2:69359276-69359295 | Msa0267660:CDS | 30.0% | |
GCAAATATGGTTGTGAAAAA+GGG | + | chr2_2:69359277-69359296 | Msa0267660:CDS | 30.0% | |
CAAATATGGTTGTGAAAAAG+GGG | + | chr2_2:69359278-69359297 | Msa0267660:CDS | 30.0% | |
CATCTAAAAATCTCCAACAT+TGG | - | chr2_2:69359355-69359374 | None:intergenic | 30.0% | |
TGGTTAAAAATGAAGGTGAT+TGG | + | chr2_2:69359383-69359402 | Msa0267660:CDS | 30.0% | |
TTAAAAATGAAGGTGATTGG+TGG | + | chr2_2:69359386-69359405 | Msa0267660:CDS | 30.0% | |
!! | TGAAGTTGATGTAAAGAAGT+TGG | + | chr2_2:69359414-69359433 | Msa0267660:CDS | 30.0% |
AGAAAATTTCTTTGCCTGTT+GGG | + | chr2_2:69359440-69359459 | Msa0267660:CDS | 30.0% | |
!! | TAATCTTTTCCTTTTAGAGG+AGG | + | chr2_2:69359829-69359848 | Msa0267660:intron | 30.0% |
ATGCATGCAAAATAATGTAG+TGG | - | chr2_2:69359943-69359962 | None:intergenic | 30.0% | |
CATAACAAGTCAATACATAG+TGG | - | chr2_2:69359978-69359997 | None:intergenic | 30.0% | |
TAATAATTAGTTCAGCATCC+TGG | + | chr2_2:69360055-69360074 | Msa0267660:intron | 30.0% | |
ACACAAACCTCTTGTAAATT+TGG | + | chr2_2:69360179-69360198 | Msa0267660:intron | 30.0% | |
AGTATACGACATAACCAAAA+TGG | + | chr2_2:69360473-69360492 | Msa0267660:CDS | 30.0% | |
!! | TCTTACGTTTTGTTCCATTT+TGG | - | chr2_2:69360490-69360509 | None:intergenic | 30.0% |
AAAACGTAAGAAGCAAAACA+AGG | + | chr2_2:69360499-69360518 | Msa0267660:CDS | 30.0% | |
AAACGTAAGAAGCAAAACAA+GGG | + | chr2_2:69360500-69360519 | Msa0267660:CDS | 30.0% | |
TAAATGAGATATTTGTGTGG+TGG | + | chr2_2:69361195-69361214 | Msa0267660:CDS | 30.0% | |
!!! | GAATAGCATATAGTTTTGGA+GGG | - | chr2_2:69361313-69361332 | None:intergenic | 30.0% |
!!! | TGAATAGCATATAGTTTTGG+AGG | - | chr2_2:69361314-69361333 | None:intergenic | 30.0% |
CTATATGCTATTCACTATCT+TGG | + | chr2_2:69361320-69361339 | Msa0267660:CDS | 30.0% | |
ATAGAGACTATGATTGCAAT+TGG | + | chr2_2:69361363-69361382 | Msa0267660:intron | 30.0% | |
TAGAGACTATGATTGCAATT+GGG | + | chr2_2:69361364-69361383 | Msa0267660:intron | 30.0% | |
! | GTGGAATTTTCATGATAGAA+TGG | + | chr2_2:69361436-69361455 | Msa0267660:CDS | 30.0% |
AAGGAGAAGATCATATAAGA+TGG | + | chr2_2:69361520-69361539 | Msa0267660:CDS | 30.0% | |
AGGAGAAGATCATATAAGAT+GGG | + | chr2_2:69361521-69361540 | Msa0267660:CDS | 30.0% | |
! | AAAAGAGATCCAGATTTTCT+AGG | - | chr2_2:69361584-69361603 | None:intergenic | 30.0% |
! | AAAATCTGGATCTCTTTTGA+TGG | + | chr2_2:69361586-69361605 | Msa0267660:intron | 30.0% |
!! | TTTTTATACTTCAGTGGACT+CGG | + | chr2_2:69361978-69361997 | Msa0267660:intron | 30.0% |
GTTAGACAAAATCGGAAAAT+AGG | - | chr2_2:69362088-69362107 | None:intergenic | 30.0% | |
ACTGATAATACAACTAAGCA+GGG | - | chr2_2:69362417-69362436 | None:intergenic | 30.0% | |
AACTGATAATACAACTAAGC+AGG | - | chr2_2:69362418-69362437 | None:intergenic | 30.0% | |
!! | ATGCATTTAGCTTAGTCTTT+TGG | - | chr2_2:69362565-69362584 | None:intergenic | 30.0% |
!! | ATAACTATGCATTTAGCTTG+CGG | - | chr2_2:69362626-69362645 | None:intergenic | 30.0% |
AAAATATGGATTTCAAGCCA+AGG | - | chr2_2:69362720-69362739 | None:intergenic | 30.0% | |
TTTCACCAACCCTATTTATT+TGG | + | chr2_2:69362774-69362793 | Msa0267660:intron | 30.0% | |
AGTGTATAAAATTTAGGGGT+GGG | - | chr2_2:69362803-69362822 | None:intergenic | 30.0% | |
CACCATATATAGAGAAGATA+AGG | - | chr2_2:69362835-69362854 | None:intergenic | 30.0% | |
!! | CTCTATATATGGTGTTATTG+AGG | + | chr2_2:69362841-69362860 | Msa0267660:intron | 30.0% |
TCTAAATCCAAAATGTTTGG+TGG | - | chr2_2:69362878-69362897 | None:intergenic | 30.0% | |
ACTCACCTGAAATATAAGTA+AGG | + | chr2_2:69362922-69362941 | Msa0267660:intron | 30.0% | |
ATTGGACTTAAGGAACAAAA+TGG | - | chr2_2:69362953-69362972 | None:intergenic | 30.0% | |
! | GTGTCACTCTTACAAATATT+AGG | - | chr2_2:69363110-69363129 | None:intergenic | 30.0% |
AATAACAATGCCTAAATGGA+GGG | - | chr2_2:69363156-69363175 | None:intergenic | 30.0% | |
TGCATAAACAATCAGAAAGA+TGG | - | chr2_2:69363284-69363303 | None:intergenic | 30.0% | |
!! | AATTTCATCTCTGAAACTGT+CGG | - | chr2_2:69363541-69363560 | None:intergenic | 30.0% |
CAAGATACATTTCTATGGTA+AGG | - | chr2_2:69363604-69363623 | None:intergenic | 30.0% | |
TACCAAATCAAAAATCATGG+AGG | + | chr2_2:69363692-69363711 | Msa0267660:CDS | 30.0% | |
ATAAGTGAATGGAACATACA+TGG | + | chr2_2:69363817-69363836 | Msa0267660:CDS | 30.0% | |
!! | AAGCATCACAATTTTTCAAC+TGG | + | chr2_2:69363866-69363885 | Msa0267660:CDS | 30.0% |
CAAATATGGTTGTGAAGAAA+GGG | + | chr2_2:69364076-69364095 | Msa0267660:CDS | 30.0% | |
TGAAGAAAGGGAAGAAAAAT+TGG | + | chr2_2:69364088-69364107 | Msa0267660:CDS | 30.0% | |
AAGGGAAGAAAAATTGGAAA+TGG | + | chr2_2:69364094-69364113 | Msa0267660:CDS | 30.0% | |
CATCTAAAAATCTCCAACAT+TGG | - | chr2_2:69359355-69359374 | None:intergenic | 30.0% | |
!! | GATGATTTGGTTAAACATGA+AGG | + | chr2_2:69364174-69364193 | Msa0267660:CDS | 30.0% |
!! | TAGTTTAGCTTTGCCTATAT+GGG | + | chr2_2:69364266-69364285 | Msa0267660:CDS | 30.0% |
TTGCAAAATTTGCATTACAC+TGG | + | chr2_2:69364335-69364354 | Msa0267660:intron | 30.0% | |
!!! | GTTTGGTTCCTGTTTTTAAT+AGG | - | chr2_2:69364774-69364793 | None:intergenic | 30.0% |
ATTATACCAAGATTCGTTTG+TGG | + | chr2_2:69364929-69364948 | Msa0267660:intron | 30.0% | |
AGTAATCCATTTATGAGGAT+TGG | + | chr2_2:69365134-69365153 | Msa0267660:intron | 30.0% | |
!!! | GAATAGCATATAGTTTTGGA+GGG | - | chr2_2:69361313-69361332 | None:intergenic | 30.0% |
!!! | TGAATAGCATATAGTTTTGG+AGG | - | chr2_2:69361314-69361333 | None:intergenic | 30.0% |
ATAGAGACTATGATTGCAAT+TGG | + | chr2_2:69361363-69361382 | Msa0267660:intron | 30.0% | |
TAGAGACTATGATTGCAATT+GGG | + | chr2_2:69361364-69361383 | Msa0267660:intron | 30.0% | |
GTGGAAATTTCATGATAGAA+TGG | + | chr2_2:69365533-69365552 | Msa0267660:CDS | 30.0% | |
AAAAGAGAGTCAGAATTTCT+AGG | - | chr2_2:69365681-69365700 | None:intergenic | 30.0% | |
! | AAATTCTGACTCTCTTTTGA+TGG | + | chr2_2:69365683-69365702 | Msa0267660:CDS | 30.0% |
CCTTAGACAATATTGGAGAT+TGG | - | chr2_2:69358279-69358298 | None:intergenic | 35.0% | |
CCAATCTCCAATATTGTCTA+AGG | + | chr2_2:69358276-69358295 | Msa0267660:five_prime_UTR | 35.0% | |
ATAACAGTGCCTAAAATGGA+GGG | - | chr2_2:69358469-69358488 | None:intergenic | 35.0% | |
AATAACAGTGCCTAAAATGG+AGG | - | chr2_2:69358470-69358489 | None:intergenic | 35.0% | |
!! | CTCATAATCAAAGCTTTGGA+TGG | - | chr2_2:69358557-69358576 | None:intergenic | 35.0% |
CAGAAGAAGATGAGAAAGAA+AGG | - | chr2_2:69358742-69358761 | None:intergenic | 35.0% | |
TTGTGTGATCTTCAACTTGT+AGG | + | chr2_2:69358832-69358851 | Msa0267660:intron | 35.0% | |
TGTGTGATCTTCAACTTGTA+GGG | + | chr2_2:69358833-69358852 | Msa0267660:intron | 35.0% | |
! | GGATTCCTTGATTTTGCTTT+TGG | - | chr2_2:69358899-69358918 | None:intergenic | 35.0% |
TCAAGGAATCCAAAGAAGAA+TGG | + | chr2_2:69358908-69358927 | Msa0267660:CDS | 35.0% | |
CTAGGCGAAAAAATTGGTAA+AGG | + | chr2_2:69358956-69358975 | Msa0267660:intron | 35.0% | |
!! | AATTCTGGCATTGGTAATTC+GGG | - | chr2_2:69359151-69359170 | None:intergenic | 35.0% |
TATGTTGCAAATTCTGGCAT+TGG | - | chr2_2:69359160-69359179 | None:intergenic | 35.0% | |
CATGCAAGTATCCATTAGAA+GGG | + | chr2_2:69359212-69359231 | Msa0267660:intron | 35.0% | |
TGAAAAAGGGGAAGAAAGAT+TGG | + | chr2_2:69359290-69359309 | Msa0267660:CDS | 35.0% | |
GAGTAAATGTAGACCAATGT+TGG | + | chr2_2:69359339-69359358 | Msa0267660:CDS | 35.0% | |
CAGAAAATTTCTTTGCCTGT+TGG | + | chr2_2:69359439-69359458 | Msa0267660:CDS | 35.0% | |
TTTAACCTTCCTCCTCTAAA+AGG | - | chr2_2:69359841-69359860 | None:intergenic | 35.0% | |
! | CAATACATAGTGGTTGGTTA+GGG | - | chr2_2:69359968-69359987 | None:intergenic | 35.0% |
! | TCAATACATAGTGGTTGGTT+AGG | - | chr2_2:69359969-69359988 | None:intergenic | 35.0% |
ACAAGTCAATACATAGTGGT+TGG | - | chr2_2:69359974-69359993 | None:intergenic | 35.0% | |
! | AGAAAACAAGACTTTGGGTT+GGG | - | chr2_2:69360085-69360104 | None:intergenic | 35.0% |
TAGAAAACAAGACTTTGGGT+TGG | - | chr2_2:69360086-69360105 | None:intergenic | 35.0% | |
ATTCGGTCCAAATTTACAAG+AGG | - | chr2_2:69360189-69360208 | None:intergenic | 35.0% | |
!!! | GTTTGGTTCCTGTTTTTAAG+AGG | - | chr2_2:69360602-69360621 | None:intergenic | 35.0% |
! | AGCTGTCAATGAGAAGTATA+AGG | - | chr2_2:69360629-69360648 | None:intergenic | 35.0% |
! | TATGTTCCATTTTCTGCTCT+CGG | - | chr2_2:69360726-69360745 | None:intergenic | 35.0% |
ATTATAGTAAGTTCCGGTTG+TGG | + | chr2_2:69360757-69360776 | Msa0267660:intron | 35.0% | |
ATTCTGATATTCTTGTGCTG+AGG | + | chr2_2:69360814-69360833 | Msa0267660:CDS | 35.0% | |
GTAGAAGCAAGTGTGAAAAA+TGG | + | chr2_2:69361272-69361291 | Msa0267660:CDS | 35.0% | |
! | ACTATCTTGGTTTGAAACCT+TGG | + | chr2_2:69361333-69361352 | Msa0267660:intron | 35.0% |
AACGTAGGACTGAGTTAAAT+TGG | + | chr2_2:69361495-69361514 | Msa0267660:CDS | 35.0% | |
ACGTAGGACTGAGTTAAATT+GGG | + | chr2_2:69361496-69361515 | Msa0267660:CDS | 35.0% | |
TGGGATCACTTGATTATCAT+TGG | + | chr2_2:69361540-69361559 | Msa0267660:CDS | 35.0% | |
! | TACGGAAGGTACAAGATATA+TGG | - | chr2_2:69361701-69361720 | None:intergenic | 35.0% |
TATATCTTGTACCTTCCGTA+TGG | + | chr2_2:69361701-69361720 | Msa0267660:intron | 35.0% | |
ATATGTCTATACCATACGGA+AGG | - | chr2_2:69361715-69361734 | None:intergenic | 35.0% | |
TTGGTAAAATTTAGTGGGAC+TGG | - | chr2_2:69361939-69361958 | None:intergenic | 35.0% | |
AATCGGAAAATAGGCGATTT+AGG | - | chr2_2:69362079-69362098 | None:intergenic | 35.0% | |
!! | AAGCGACACTCATTTTGAAA+CGG | - | chr2_2:69362329-69362348 | None:intergenic | 35.0% |
!! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr2_2:69362131-69362150 | Msa0267660:intron | 35.0% |
! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr2_2:69362261-69362280 | Msa0267660:intron | 35.0% |
! | TGTGCAGAGTATTAATTGGA+GGG | + | chr2_2:69362265-69362284 | Msa0267660:intron | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_2:69362329-69362348 | Msa0267660:intron | 35.0% |
CTGATAATACAACTAAGCAG+GGG | - | chr2_2:69362416-69362435 | None:intergenic | 35.0% | |
AGGACAATTCAACAAGCAAT+TGG | - | chr2_2:69362700-69362719 | None:intergenic | 35.0% | |
! | ATTGCTTGTTGAATTGTCCT+TGG | + | chr2_2:69362700-69362719 | Msa0267660:intron | 35.0% |
GAGTGTATAAAATTTAGGGG+TGG | - | chr2_2:69362804-69362823 | None:intergenic | 35.0% | |
!! | TATGGTGTTATTGAGGTGTT+TGG | + | chr2_2:69362848-69362867 | Msa0267660:intron | 35.0% |
!! | ATGGTGTTATTGAGGTGTTT+GGG | + | chr2_2:69362849-69362868 | Msa0267660:intron | 35.0% |
GGAAAATGGAGCTAAGTAAA+TGG | + | chr2_2:69362994-69363013 | Msa0267660:intron | 35.0% | |
ATAACAATGCCTAAATGGAG+GGG | - | chr2_2:69363155-69363174 | None:intergenic | 35.0% | |
GAATAACAATGCCTAAATGG+AGG | - | chr2_2:69363157-69363176 | None:intergenic | 35.0% | |
CTGGAATAACAATGCCTAAA+TGG | - | chr2_2:69363160-69363179 | None:intergenic | 35.0% | |
CTATCAAAATAGACCGAAGA+AGG | - | chr2_2:69363325-69363344 | None:intergenic | 35.0% | |
TGTGTGATCTTCAAACTTGT+AGG | + | chr2_2:69363630-69363649 | Msa0267660:intron | 35.0% | |
GTGTGATCTTCAAACTTGTA+GGG | + | chr2_2:69363631-69363650 | Msa0267660:intron | 35.0% | |
TCAAACTTGTAGGGAGAAAA+AGG | + | chr2_2:69363640-69363659 | Msa0267660:intron | 35.0% | |
AAGATGACGACATAAGTGAA+TGG | + | chr2_2:69363806-69363825 | Msa0267660:CDS | 35.0% | |
TATGTTGTGAATTCTGGCAT+TGG | - | chr2_2:69363958-69363977 | None:intergenic | 35.0% | |
GCAAATATGGTTGTGAAGAA+AGG | + | chr2_2:69364075-69364094 | Msa0267660:CDS | 35.0% | |
TGGTTAAACATGAAGGTGAT+TGG | + | chr2_2:69364181-69364200 | Msa0267660:CDS | 35.0% | |
TTAAACATGAAGGTGATTGG+TGG | + | chr2_2:69364184-69364203 | Msa0267660:CDS | 35.0% | |
!! | TGAGGTTGATGTAAAGAGAT+TGG | + | chr2_2:69364212-69364231 | Msa0267660:CDS | 35.0% |
CAGAAAGTTTCTTTGCCAAT+TGG | + | chr2_2:69364237-69364256 | Msa0267660:CDS | 35.0% | |
!! | GTAGTTTAGCTTTGCCTATA+TGG | + | chr2_2:69364265-69364284 | Msa0267660:CDS | 35.0% |
AACATACCTTGTTCCCATAT+AGG | - | chr2_2:69364282-69364301 | None:intergenic | 35.0% | |
! | TTTTGCAGGGATAGACAAAA+TGG | + | chr2_2:69364645-69364664 | Msa0267660:intron | 35.0% |
TCTTCAGAAAGATACGTTTG+TGG | + | chr2_2:69364727-69364746 | Msa0267660:CDS | 35.0% | |
GCACAAAGCCTATTAAAAAC+AGG | + | chr2_2:69364763-69364782 | Msa0267660:CDS | 35.0% | |
! | AGCTGTCAATGAGAAGTATA+AGG | - | chr2_2:69360629-69360648 | None:intergenic | 35.0% |
ATTCCTCAGCACAAAGATAT+CGG | - | chr2_2:69364992-69365011 | None:intergenic | 35.0% | |
TTGCTACCAATCCTCATAAA+TGG | - | chr2_2:69365143-69365162 | None:intergenic | 35.0% | |
TCATGAACGAGATCTTTGTA+TGG | + | chr2_2:69365289-69365308 | Msa0267660:CDS | 35.0% | |
GTAGAAGCAAGTGTGAAAAA+TGG | + | chr2_2:69361272-69361291 | Msa0267660:CDS | 35.0% | |
CTATATGCTATTCACTACCT+TGG | + | chr2_2:69365417-69365436 | Msa0267660:CDS | 35.0% | |
ACGTAGGACTGAGTTAAATA+TGG | + | chr2_2:69365593-69365612 | Msa0267660:CDS | 35.0% | |
GGACTGAGTTAAATATGGAA+AGG | + | chr2_2:69365598-69365617 | Msa0267660:CDS | 35.0% | |
AAGGAGAAGATCTAGTAAGA+TGG | + | chr2_2:69365617-69365636 | Msa0267660:CDS | 35.0% | |
AGGAGAAGATCTAGTAAGAT+GGG | + | chr2_2:69365618-69365637 | Msa0267660:CDS | 35.0% | |
TGGGATCACTTGATTATCAT+TGG | + | chr2_2:69361540-69361559 | Msa0267660:CDS | 35.0% | |
TGGCTTAAGTAGCAAGGATT+AGG | - | chr2_2:69358376-69358395 | None:intergenic | 40.0% | |
TAACAGTGCCTAAAATGGAG+GGG | - | chr2_2:69358468-69358487 | None:intergenic | 40.0% | |
AATAGACCGAAGAAGAAGGA+CGG | - | chr2_2:69358634-69358653 | None:intergenic | 40.0% | |
TCGAAATAGACCGAAGAAGA+AGG | - | chr2_2:69358638-69358657 | None:intergenic | 40.0% | |
ATTGAGAGAATGCCATCACA+AGG | + | chr2_2:69358685-69358704 | Msa0267660:CDS | 40.0% | |
GAAAATTGGAACGGTGAACA+TGG | + | chr2_2:69358982-69359001 | Msa0267660:CDS | 40.0% | |
AAGACGATGATGTAAGCGAA+TGG | + | chr2_2:69359008-69359027 | Msa0267660:CDS | 40.0% | |
GTAAGCGAATGGAACATACA+TGG | + | chr2_2:69359019-69359038 | Msa0267660:CDS | 40.0% | |
GGACAGATTTATTTCCCGAA+TGG | + | chr2_2:69359089-69359108 | Msa0267660:CDS | 40.0% | |
TTCTTCTTCGTCGATCCATT+CGG | - | chr2_2:69359107-69359126 | None:intergenic | 40.0% | |
! | ATTGGTAATTCGGGACATGT+TGG | - | chr2_2:69359142-69359161 | None:intergenic | 40.0% |
! | CCTTCTAATGGATACTTGCA+TGG | - | chr2_2:69359214-69359233 | None:intergenic | 40.0% |
CCATGCAAGTATCCATTAGA+AGG | + | chr2_2:69359211-69359230 | Msa0267660:intron | 40.0% | |
CAAGTATCCATTAGAAGGGT+GGG | + | chr2_2:69359216-69359235 | Msa0267660:intron | 40.0% | |
AAGTATCCATTAGAAGGGTG+GGG | + | chr2_2:69359217-69359236 | Msa0267660:intron | 40.0% | |
AGGGGAAGAAAGATTGGAAA+TGG | + | chr2_2:69359296-69359315 | Msa0267660:CDS | 40.0% | |
AGATTGGAAATGGAAGAGCA+AGG | + | chr2_2:69359306-69359325 | Msa0267660:CDS | 40.0% | |
!! | CAATTTGGCTTTGCCTCTAT+GGG | + | chr2_2:69359468-69359487 | Msa0267660:CDS | 40.0% |
TACATACCTTGTTCCCATAG+AGG | - | chr2_2:69359484-69359503 | None:intergenic | 40.0% | |
TTTCCTAAGCAGAAAGTCGT+AGG | - | chr2_2:69359656-69359675 | None:intergenic | 40.0% | |
!! | CTTTTCCTTTTAGAGGAGGA+AGG | + | chr2_2:69359833-69359852 | Msa0267660:intron | 40.0% |
GCGACTTTGATTGTAACGTA+GGG | - | chr2_2:69360120-69360139 | None:intergenic | 40.0% | |
AGCGACTTTGATTGTAACGT+AGG | - | chr2_2:69360121-69360140 | None:intergenic | 40.0% | |
GCACAAAGCCTCTTAAAAAC+AGG | + | chr2_2:69360591-69360610 | Msa0267660:CDS | 40.0% | |
! | GAGAAGTATAAGGTCACGTT+TGG | - | chr2_2:69360619-69360638 | None:intergenic | 40.0% |
! | ATGTTCCATTTTCTGCTCTC+GGG | - | chr2_2:69360725-69360744 | None:intergenic | 40.0% |
AATCAGTAAGTTGCCACAAC+CGG | - | chr2_2:69360773-69360792 | None:intergenic | 40.0% | |
! | GATCAGTCCATTTTCAACTC+TGG | + | chr2_2:69360885-69360904 | Msa0267660:CDS | 40.0% |
CATGATGCCAGAGTTGAAAA+TGG | - | chr2_2:69360895-69360914 | None:intergenic | 40.0% | |
! | CATTTTCAACTCTGGCATCA+TGG | + | chr2_2:69360893-69360912 | Msa0267660:CDS | 40.0% |
! | AAACTACCTGAAGGTGCAAT+TGG | - | chr2_2:69360931-69360950 | None:intergenic | 40.0% |
AATGTAGTGTGCTTATGAGC+CGG | + | chr2_2:69361129-69361148 | Msa0267660:intron | 40.0% | |
CATTGTATGATACGATGTCG+TGG | - | chr2_2:69361157-69361176 | None:intergenic | 40.0% | |
CACGACATCGTATCATACAA+TGG | + | chr2_2:69361155-69361174 | Msa0267660:CDS | 40.0% | |
GACATCGTATCATACAATGG+AGG | + | chr2_2:69361158-69361177 | Msa0267660:CDS | 40.0% | |
TCATACAATGGAGGTGATCA+AGG | + | chr2_2:69361167-69361186 | Msa0267660:CDS | 40.0% | |
CATACAATGGAGGTGATCAA+GGG | + | chr2_2:69361168-69361187 | Msa0267660:CDS | 40.0% | |
AGATATTTGTGTGGTGGCAT+AGG | + | chr2_2:69361201-69361220 | Msa0267660:CDS | 40.0% | |
ACTTGCTTCTACTGTTGTGT+TGG | - | chr2_2:69361264-69361283 | None:intergenic | 40.0% | |
TAGTCTCTATAGCAATGCCA+AGG | - | chr2_2:69361353-69361372 | None:intergenic | 40.0% | |
CTATGATTGCAATTGGGATG+TGG | + | chr2_2:69361370-69361389 | Msa0267660:CDS | 40.0% | |
AAGGGTTTATGCAAGTGATG+TGG | + | chr2_2:69361400-69361419 | Msa0267660:CDS | 40.0% | |
CATGAAAATTCCACCAACGT+TGG | - | chr2_2:69361430-69361449 | None:intergenic | 40.0% | |
GGACTGAGTTAAATTGGGAA+AGG | + | chr2_2:69361501-69361520 | Msa0267660:CDS | 40.0% | |
GTCACTGATCCTAGAAAATC+TGG | + | chr2_2:69361572-69361591 | Msa0267660:intron | 40.0% | |
!! | ATTGCACACATGTTGACTTG+TGG | - | chr2_2:69361831-69361850 | None:intergenic | 40.0% |
AGTCATGGAGACATCAAAGT+TGG | - | chr2_2:69361958-69361977 | None:intergenic | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr2_2:69362369-69362388 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | + | chr2_2:69362264-69362283 | Msa0267660:intron | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr2_2:69362369-69362388 | Msa0267660:intron | 40.0% |
!! | TTTGAAACGGAGGGAGTATT+AGG | + | chr2_2:69362378-69362397 | Msa0267660:intron | 40.0% |
!!! | AACCCTTTTAGAGTTGCGAT+TGG | + | chr2_2:69362539-69362558 | Msa0267660:intron | 40.0% |
CAATTGGCAACGTTTCTACA+AGG | - | chr2_2:69362684-69362703 | None:intergenic | 40.0% | |
GGTGTCCAAATAAATAGGGT+TGG | - | chr2_2:69362782-69362801 | None:intergenic | 40.0% | |
GGTGGGTGTCCAAATAAATA+GGG | - | chr2_2:69362786-69362805 | None:intergenic | 40.0% | |
TTTGAGAGAATGCCATCACA+AGG | + | chr2_2:69363369-69363388 | Msa0267660:CDS | 40.0% | |
AAAAATGAAAGCGGCGTTAG+AGG | + | chr2_2:69363666-69363685 | Msa0267660:CDS | 40.0% | |
!! | GGCCTCCATGATTTTTGATT+TGG | - | chr2_2:69363697-69363716 | None:intergenic | 40.0% |
GGACAGATTTATTTCCCGAA+TGG | + | chr2_2:69359089-69359108 | Msa0267660:CDS | 40.0% | |
TTCTTCTTCGTCGATCCATT+CGG | - | chr2_2:69359107-69359126 | None:intergenic | 40.0% | |
!! | AATTCTGGCATTGGTAACTC+GGG | - | chr2_2:69363949-69363968 | None:intergenic | 40.0% |
!! | GAATTCTGGCATTGGTAACT+CGG | - | chr2_2:69363950-69363969 | None:intergenic | 40.0% |
CAAGTATCCAGAAGAAGGAT+GGG | + | chr2_2:69364014-69364033 | Msa0267660:intron | 40.0% | |
AAGTATCCAGAAGAAGGATG+GGG | + | chr2_2:69364015-69364034 | Msa0267660:intron | 40.0% | |
! | GGAAGAGTAGAGTTGTGTTT+TGG | + | chr2_2:69364115-69364134 | Msa0267660:CDS | 40.0% |
GAGTAAGTGTAGACCAATGT+TGG | + | chr2_2:69364137-69364156 | Msa0267660:CDS | 40.0% | |
!!! | AGGTGATTGGTGGTTTTTTG+AGG | + | chr2_2:69364194-69364213 | Msa0267660:CDS | 40.0% |
GCTAAACTACACGAACCAAT+TGG | - | chr2_2:69364255-69364274 | None:intergenic | 40.0% | |
! | CGTATCTTTCTGAAGAGTGT+AGG | - | chr2_2:69364723-69364742 | None:intergenic | 40.0% |
! | GAGAAGTATAAGGTCACGTT+TGG | - | chr2_2:69360619-69360638 | None:intergenic | 40.0% |
AGGTTCCATTCTTTCCTCTT+GGG | - | chr2_2:69364897-69364916 | None:intergenic | 40.0% | |
TAGGTTCCATTCTTTCCTCT+TGG | - | chr2_2:69364898-69364917 | None:intergenic | 40.0% | |
AAGTTGCCACAAACGAATCT+TGG | - | chr2_2:69364938-69364957 | None:intergenic | 40.0% | |
TTTCCTCAAATGTCTGCTAC+TGG | + | chr2_2:69365030-69365049 | Msa0267660:CDS | 40.0% | |
TTACCAGTAGCAGACATTTG+AGG | - | chr2_2:69365036-69365055 | None:intergenic | 40.0% | |
! | TACCTGAAGGTGCAATTAGA+GGG | - | chr2_2:69365099-69365118 | None:intergenic | 40.0% |
! | TTACCTGAAGGTGCAATTAG+AGG | - | chr2_2:69365100-69365119 | None:intergenic | 40.0% |
CACGACATTGTATCATACAC+CGG | + | chr2_2:69365252-69365271 | Msa0267660:CDS | 40.0% | |
AGATCTCGTTCATGAATCCT+TGG | - | chr2_2:69365284-69365303 | None:intergenic | 40.0% | |
TGAACGAGATCTTTGTATGG+TGG | + | chr2_2:69365292-69365311 | Msa0267660:CDS | 40.0% | |
AGATCTTTGTATGGTGGCAT+AGG | + | chr2_2:69365298-69365317 | Msa0267660:CDS | 40.0% | |
ACTTGCTTCTACTGTTGTGT+TGG | - | chr2_2:69361264-69361283 | None:intergenic | 40.0% | |
! | ACTACCTTGGTTTGAAACCT+TGG | + | chr2_2:69365430-69365449 | Msa0267660:CDS | 40.0% |
AATGCCAAGGTTTCAAACCA+AGG | - | chr2_2:69361340-69361359 | None:intergenic | 40.0% | |
TAGTCTCTATAGCAATGCCA+AGG | - | chr2_2:69361353-69361372 | None:intergenic | 40.0% | |
TGATTGCAATTGGGATGTAG+TGG | + | chr2_2:69365470-69365489 | Msa0267660:CDS | 40.0% | |
!! | ATTGGGATGTAGTGGATCAA+AGG | + | chr2_2:69365478-69365497 | Msa0267660:CDS | 40.0% |
!! | TTGGGATGTAGTGGATCAAA+GGG | + | chr2_2:69365479-69365498 | Msa0267660:CDS | 40.0% |
AAGGGTTTATGCTAGTGATG+TGG | + | chr2_2:69365497-69365516 | Msa0267660:CDS | 40.0% | |
CATGAAATTTCCACCAACGT+TGG | - | chr2_2:69365527-69365546 | None:intergenic | 40.0% | |
! | GTAGGTTGACAAAACAACGT+AGG | + | chr2_2:69365577-69365596 | Msa0267660:CDS | 40.0% |
!! | GAGGATTGGCTTAAGTAGCA+AGG | - | chr2_2:69358382-69358401 | None:intergenic | 45.0% |
! | AGTGTAGTCCCCTCCATTTT+AGG | + | chr2_2:69358457-69358476 | Msa0267660:five_prime_UTR | 45.0% |
AGAAGAAGGACGGAGAAGAA+GGG | - | chr2_2:69358624-69358643 | None:intergenic | 45.0% | |
AAGAAGAAGGACGGAGAAGA+AGG | - | chr2_2:69358625-69358644 | None:intergenic | 45.0% | |
TCTTCTCCGTCCTTCTTCTT+CGG | + | chr2_2:69358625-69358644 | Msa0267660:CDS | 45.0% | |
GAGAATGCCATCACAAGGTA+AGG | + | chr2_2:69358690-69358709 | Msa0267660:intron | 45.0% | |
! | GTAAGGTGAGCCGATTCTAA+TGG | + | chr2_2:69358707-69358726 | Msa0267660:intron | 45.0% |
GGATGCCATGCCATTAGAAT+CGG | - | chr2_2:69358720-69358739 | None:intergenic | 45.0% | |
TCTTCTTCGTCGATCCATTC+GGG | - | chr2_2:69359106-69359125 | None:intergenic | 45.0% | |
GCAAGTATCCATTAGAAGGG+TGG | + | chr2_2:69359215-69359234 | Msa0267660:intron | 45.0% | |
! | GGAAGAGCAAGGTTGTGTTT+TGG | + | chr2_2:69359317-69359336 | Msa0267660:CDS | 45.0% |
!! | GCAATTTGGCTTTGCCTCTA+TGG | + | chr2_2:69359467-69359486 | Msa0267660:CDS | 45.0% |
GAACCTACGACTTTCTGCTT+AGG | + | chr2_2:69359650-69359669 | Msa0267660:intron | 45.0% | |
TCCTCAGAAAGCTACGTTTG+TGG | + | chr2_2:69360555-69360574 | Msa0267660:CDS | 45.0% | |
TCCACAAACGTAGCTTTCTG+AGG | - | chr2_2:69360559-69360578 | None:intergenic | 45.0% | |
! | CATTTTCTGCTCTCGGGTTT+CGG | - | chr2_2:69360719-69360738 | None:intergenic | 45.0% |
TTTCCTCAAATGTCTGCCAC+TGG | + | chr2_2:69360858-69360877 | Msa0267660:CDS | 45.0% | |
TTCCTCAAATGTCTGCCACT+GGG | + | chr2_2:69360859-69360878 | Msa0267660:CDS | 45.0% | |
!! | AATGGACTGATCATTCCCAG+TGG | - | chr2_2:69360877-69360896 | None:intergenic | 45.0% |
! | TACCTGAAGGTGCAATTGGA+AGG | - | chr2_2:69360927-69360946 | None:intergenic | 45.0% |
TGATTGCAATTGGGATGTGG+TGG | + | chr2_2:69361373-69361392 | Msa0267660:CDS | 45.0% | |
!! | ATTGGGATGTGGTGGATCAA+AGG | + | chr2_2:69361381-69361400 | Msa0267660:CDS | 45.0% |
!! | TTGGGATGTGGTGGATCAAA+GGG | + | chr2_2:69361382-69361401 | Msa0267660:CDS | 45.0% |
! | GTAGGTTGACAAGACAACGT+AGG | + | chr2_2:69361480-69361499 | Msa0267660:CDS | 45.0% |
TTCCTCCAGCTAAGGATACA+TGG | + | chr2_2:69361780-69361799 | Msa0267660:intron | 45.0% | |
!! | TCCAACTTGCTATCGGCTAA+AGG | + | chr2_2:69362040-69362059 | Msa0267660:intron | 45.0% |
TCCTTTAGCCGATAGCAAGT+TGG | - | chr2_2:69362044-69362063 | None:intergenic | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr2_2:69362368-69362387 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr2_2:69362368-69362387 | Msa0267660:intron | 45.0% |
! | GGCCAATCGCAACTCTAAAA+GGG | - | chr2_2:69362544-69362563 | None:intergenic | 45.0% |
TGGCCAATCGCAACTCTAAA+AGG | - | chr2_2:69362545-69362564 | None:intergenic | 45.0% | |
GGGTGGGTGTCCAAATAAAT+AGG | - | chr2_2:69362787-69362806 | None:intergenic | 45.0% | |
! | TGGGTGTCCACCAAACATTT+TGG | + | chr2_2:69362868-69362887 | Msa0267660:intron | 45.0% |
!! | GAGAGCACCATCCAAAACTT+TGG | + | chr2_2:69363231-69363250 | Msa0267660:CDS | 45.0% |
AGCACCATCCAAAACTTTGG+TGG | + | chr2_2:69363234-69363253 | Msa0267660:CDS | 45.0% | |
! | GAATCGGACCACCAAAGTTT+TGG | - | chr2_2:69363245-69363264 | None:intergenic | 45.0% |
AATAGACCGAAGAAGGCAGA+CGG | - | chr2_2:69363318-69363337 | None:intergenic | 45.0% | |
!! | CAAAGAGCATCCAACAAGTG+AGG | - | chr2_2:69363353-69363372 | None:intergenic | 45.0% |
TCATGGAGGCCAAAGACAAA+TGG | + | chr2_2:69363706-69363725 | Msa0267660:CDS | 45.0% | |
TCTTCTTCGTCGATCCATTC+GGG | - | chr2_2:69359106-69359125 | None:intergenic | 45.0% | |
! | ATTGGTAACTCGGGACATGT+TGG | - | chr2_2:69363940-69363959 | None:intergenic | 45.0% |
CCTTCTTCTGGATACTTGCA+TGG | - | chr2_2:69364012-69364031 | None:intergenic | 45.0% | |
CCATGCAAGTATCCAGAAGA+AGG | + | chr2_2:69364009-69364028 | Msa0267660:intron | 45.0% | |
GCAAGTATCCAGAAGAAGGA+TGG | + | chr2_2:69364013-69364032 | Msa0267660:intron | 45.0% | |
! | GATGGGGTAGGGAAGTTTTA+AGG | + | chr2_2:69364031-69364050 | Msa0267660:intron | 45.0% |
GCTTTGCCTATATGGGAACA+AGG | + | chr2_2:69364273-69364292 | Msa0267660:CDS | 45.0% | |
AGAGTGTAGGACTGTTGCAT+AGG | - | chr2_2:69364710-69364729 | None:intergenic | 45.0% | |
TTCCTCTTGGGTTTCCAATC+CGG | - | chr2_2:69364885-69364904 | None:intergenic | 45.0% | |
GGAAACCCAAGAGGAAAGAA+TGG | + | chr2_2:69364889-69364908 | Msa0267660:intron | 45.0% | |
ACTCCGATATCTTTGTGCTG+AGG | + | chr2_2:69364986-69365005 | Msa0267660:CDS | 45.0% | |
! | CTCGATCCATTTTCAACGCT+GGG | + | chr2_2:69365058-69365077 | Msa0267660:CDS | 45.0% |
! | CATCATCCCAGCGTTGAAAA+TGG | - | chr2_2:69365067-69365086 | None:intergenic | 45.0% |
CGGTGTATGATACAATGTCG+TGG | - | chr2_2:69365254-69365273 | None:intergenic | 45.0% | |
GACATTGTATCATACACCGG+AGG | + | chr2_2:69365255-69365274 | Msa0267660:CDS | 45.0% | |
! | GTGAGCCGATTCTAATGGCA+TGG | + | chr2_2:69358712-69358731 | Msa0267660:intron | 50.0% |
ATCCATTAGAAGGGTGGGGT+AGG | + | chr2_2:69359221-69359240 | Msa0267660:intron | 50.0% | |
TCCATTAGAAGGGTGGGGTA+GGG | + | chr2_2:69359222-69359241 | Msa0267660:intron | 50.0% | |
! | GGTGGGGTAGGGAAGTTTTA+AGG | + | chr2_2:69359233-69359252 | Msa0267660:intron | 50.0% |
GCCTGTTGGGTCTTGCAATT+TGG | + | chr2_2:69359453-69359472 | Msa0267660:CDS | 50.0% | |
GCCAAATTGCAAGACCCAAC+AGG | - | chr2_2:69359457-69359476 | None:intergenic | 50.0% | |
GCTTTGCCTCTATGGGAACA+AGG | + | chr2_2:69359475-69359494 | Msa0267660:CDS | 50.0% | |
!! | AAAAGGTACTGAAACGCGCC+AGG | + | chr2_2:69359619-69359638 | Msa0267660:intron | 50.0% |
GATGGTTCGAATCTGCCAAC+CGG | - | chr2_2:69360688-69360707 | None:intergenic | 50.0% | |
CGAAACCCGAGAGCAGAAAA+TGG | + | chr2_2:69360717-69360736 | Msa0267660:CDS | 50.0% | |
TTCCCAGTGGCAGACATTTG+AGG | - | chr2_2:69360864-69360883 | None:intergenic | 50.0% | |
AGCCTTCCAATTGCACCTTC+AGG | + | chr2_2:69360922-69360941 | Msa0267660:CDS | 50.0% | |
CTCTAGTGTTCCTCCAGCTA+AGG | + | chr2_2:69361772-69361791 | Msa0267660:intron | 50.0% | |
CACCATGTATCCTTAGCTGG+AGG | - | chr2_2:69361785-69361804 | None:intergenic | 50.0% | |
GAGCACCATGTATCCTTAGC+TGG | - | chr2_2:69361788-69361807 | None:intergenic | 50.0% | |
GGAAGACTGCAAGTCGAATG+TGG | - | chr2_2:69361810-69361829 | None:intergenic | 50.0% | |
!!! | CGGACCACCAAAGTTTTGGA+TGG | - | chr2_2:69363241-69363260 | None:intergenic | 50.0% |
AGAAGGCAGACGGAGAAGAA+GGG | - | chr2_2:69363308-69363327 | None:intergenic | 50.0% | |
AAGAAGGCAGACGGAGAAGA+AGG | - | chr2_2:69363309-69363328 | None:intergenic | 50.0% | |
TCTTCTCCGTCTGCCTTCTT+CGG | + | chr2_2:69363309-69363328 | Msa0267660:CDS | 50.0% | |
GATAGTGCAGCCTCACTTGT+TGG | + | chr2_2:69363340-69363359 | Msa0267660:CDS | 50.0% | |
AGGCTCGCTTTACCTTGTGA+TGG | - | chr2_2:69363384-69363403 | None:intergenic | 50.0% | |
ATCCAGAAGAAGGATGGGGT+AGG | + | chr2_2:69364019-69364038 | Msa0267660:intron | 50.0% | |
TCCAGAAGAAGGATGGGGTA+GGG | + | chr2_2:69364020-69364039 | Msa0267660:intron | 50.0% | |
GGAAGATTCGAACCATCACC+CGG | + | chr2_2:69364863-69364882 | Msa0267660:intron | 50.0% | |
ATTCGAACCATCACCCGGAT+TGG | + | chr2_2:69364868-69364887 | Msa0267660:intron | 50.0% | |
TCCTCTTGGGTTTCCAATCC+GGG | - | chr2_2:69364884-69364903 | None:intergenic | 50.0% | |
! | GCTCGATCCATTTTCAACGC+TGG | + | chr2_2:69365057-69365076 | Msa0267660:CDS | 50.0% |
AGCCCTCTAATTGCACCTTC+AGG | + | chr2_2:69365094-69365113 | Msa0267660:CDS | 50.0% | |
ATGATACAATGTCGTGGCGC+AGG | - | chr2_2:69365248-69365267 | None:intergenic | 50.0% | |
CATGAATCCTTGGTCACCTC+CGG | - | chr2_2:69365274-69365293 | None:intergenic | 50.0% | |
CGGCTCACCTTACCTTGTGA+TGG | - | chr2_2:69358700-69358719 | None:intergenic | 55.0% | |
TCCCTACCCCACCCTTCTAA+TGG | - | chr2_2:69359226-69359245 | None:intergenic | 55.0% | |
GTACTGAAACGCGCCAGGTA+GGG | + | chr2_2:69359624-69359643 | Msa0267660:intron | 55.0% | |
TACTGAAACGCGCCAGGTAG+GGG | + | chr2_2:69359625-69359644 | Msa0267660:intron | 55.0% | |
CGCTCTATCCACTGAGCTAC+AGG | + | chr2_2:69359680-69359699 | Msa0267660:intron | 55.0% | |
!! | GACTTTGGGTTGGGTAGACC+AGG | - | chr2_2:69360076-69360095 | None:intergenic | 55.0% |
TGCTCTCGGGTTTCGGATTC+GGG | - | chr2_2:69360712-69360731 | None:intergenic | 55.0% | |
CTGCTCTCGGGTTTCGGATT+CGG | - | chr2_2:69360713-69360732 | None:intergenic | 55.0% | |
ATGATACGATGTCGTGGCGC+CGG | - | chr2_2:69361151-69361170 | None:intergenic | 55.0% | |
GTGATGTGGCACACCAACGT+TGG | + | chr2_2:69361414-69361433 | Msa0267660:CDS | 55.0% | |
ATGTGGCACACCAACGTTGG+TGG | + | chr2_2:69361417-69361436 | Msa0267660:CDS | 55.0% | |
GAGCACGCACGAACATTCTC+TGG | - | chr2_2:69361857-69361876 | None:intergenic | 55.0% | |
GCGCTAACGCTGCTGAACTA+GGG | - | chr2_2:69362017-69362036 | None:intergenic | 55.0% | |
AGCGCTAACGCTGCTGAACT+AGG | - | chr2_2:69362018-69362037 | None:intergenic | 55.0% | |
!! | GCGCTCGTCCAACTTGCTAT+CGG | + | chr2_2:69362033-69362052 | Msa0267660:intron | 55.0% |
GTTCGCAGTCCCCTCCATTT+AGG | + | chr2_2:69363143-69363162 | Msa0267660:intron | 55.0% | |
TCCCTACCCCATCCTTCTTC+TGG | - | chr2_2:69364024-69364043 | None:intergenic | 55.0% | |
ATGACGTTTGCGGACGGAGA+TGG | - | chr2_2:69364824-69364843 | None:intergenic | 55.0% | |
CAAGGCATGACGTTTGCGGA+CGG | - | chr2_2:69364830-69364849 | None:intergenic | 55.0% | |
TGGGTTTCCAATCCGGGTGA+TGG | - | chr2_2:69364878-69364897 | None:intergenic | 55.0% | |
! | ACCCGGATTGGAAACCCAAG+AGG | + | chr2_2:69364880-69364899 | Msa0267660:intron | 55.0% |
TCATACACCGGAGGTGACCA+AGG | + | chr2_2:69365264-69365283 | Msa0267660:CDS | 55.0% | |
GTGATGTGGCACACCAACGT+TGG | + | chr2_2:69361414-69361433 | Msa0267660:CDS | 55.0% | |
ATGTGGCACACCAACGTTGG+TGG | + | chr2_2:69361417-69361436 | Msa0267660:CDS | 55.0% | |
! | GGTACTGAAACGCGCCAGGT+AGG | + | chr2_2:69359623-69359642 | Msa0267660:intron | 60.0% |
TCGTAGGTTCGACCCCTACC+TGG | - | chr2_2:69359640-69359659 | None:intergenic | 60.0% | |
CAATGCACGGCGTTTGCGGA+CGG | - | chr2_2:69360658-69360677 | None:intergenic | 60.0% | |
CTGCCAATGCACGGCGTTTG+CGG | - | chr2_2:69360662-69360681 | None:intergenic | 60.0% | |
AACCGGCACCTGCCAATGCA+CGG | - | chr2_2:69360671-69360690 | None:intergenic | 60.0% | |
CGGGTTTCGGATTCGGGTGA+TGG | - | chr2_2:69360706-69360725 | None:intergenic | 60.0% | |
CGTCCGCAAACGTCATGCCT+TGG | + | chr2_2:69364828-69364847 | Msa0267660:CDS | 60.0% | |
CCGCCAAGGCATGACGTTTG+CGG | - | chr2_2:69364834-69364853 | None:intergenic | 60.0% | |
CCGCAAACGTCATGCCTTGG+CGG | + | chr2_2:69364831-69364850 | Msa0267660:CDS | 60.0% | |
CGCAAGCGCCTGTAGCTCAG+TGG | - | chr2_2:69359691-69359710 | None:intergenic | 65.0% | |
ACGGCGTTTGCGGACGGAGA+TGG | - | chr2_2:69360652-69360671 | None:intergenic | 65.0% | |
CGTCCGCAAACGCCGTGCAT+TGG | + | chr2_2:69360656-69360675 | Msa0267660:CDS | 65.0% | |
! | CGCAAACGCCGTGCATTGGC+AGG | + | chr2_2:69360660-69360679 | Msa0267660:CDS | 65.0% |
!! | GTGCATTGGCAGGTGCCGGT+TGG | + | chr2_2:69360670-69360689 | Msa0267660:CDS | 65.0% |
! | ATGCCTTGGCGGACGCAGGT+TGG | + | chr2_2:69364842-69364861 | Msa0267660:intron | 65.0% |
CTTCCAACCTGCGTCCGCCA+AGG | - | chr2_2:69364848-69364867 | None:intergenic | 65.0% | |
! | CGCCGTGCATTGGCAGGTGC+CGG | + | chr2_2:69360666-69360685 | Msa0267660:CDS | 70.0% |
! | CGTCATGCCTTGGCGGACGC+AGG | + | chr2_2:69364838-69364857 | Msa0267660:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 69358193 | 69365710 | 69358193 | ID=Msa0267660;Name=Msa0267660 |
chr2_2 | mRNA | 69358193 | 69365710 | 69358193 | ID=Msa0267660-mRNA-1;Parent=Msa0267660;Name=Msa0267660-mRNA-1;_AED=0.12;_eAED=0.12;_QI=322|0.2|0.06|1|0.4|0.18|16|0|1076 |
chr2_2 | exon | 69358193 | 69358706 | 69358193 | ID=Msa0267660-mRNA-1:exon:22088;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69358854 | 69358950 | 69358854 | ID=Msa0267660-mRNA-1:exon:22089;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69358960 | 69359206 | 69358960 | ID=Msa0267660-mRNA-1:exon:22090;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69359255 | 69359496 | 69359255 | ID=Msa0267660-mRNA-1:exon:22091;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69360463 | 69360621 | 69360463 | ID=Msa0267660-mRNA-1:exon:22092;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69360647 | 69360762 | 69360647 | ID=Msa0267660-mRNA-1:exon:22093;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69360768 | 69360943 | 69360768 | ID=Msa0267660-mRNA-1:exon:22094;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69361136 | 69361341 | 69361136 | ID=Msa0267660-mRNA-1:exon:22095;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69361369 | 69361571 | 69361369 | ID=Msa0267660-mRNA-1:exon:22096;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69363199 | 69363390 | 69363199 | ID=Msa0267660-mRNA-1:exon:22097;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69363652 | 69363748 | 69363652 | ID=Msa0267660-mRNA-1:exon:22098;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69363758 | 69364004 | 69363758 | ID=Msa0267660-mRNA-1:exon:22099;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69364053 | 69364294 | 69364053 | ID=Msa0267660-mRNA-1:exon:22100;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69364653 | 69364859 | 69364653 | ID=Msa0267660-mRNA-1:exon:22101;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69364986 | 69365115 | 69364986 | ID=Msa0267660-mRNA-1:exon:22102;Parent=Msa0267660-mRNA-1 |
chr2_2 | exon | 69365233 | 69365710 | 69365233 | ID=Msa0267660-mRNA-1:exon:22103;Parent=Msa0267660-mRNA-1 |
chr2_2 | five_prime_UTR | 69358193 | 69358514 | 69358193 | ID=Msa0267660-mRNA-1:five_prime_utr;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69358515 | 69358706 | 69358515 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69358854 | 69358950 | 69358854 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69358960 | 69359206 | 69358960 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69359255 | 69359496 | 69359255 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69360463 | 69360621 | 69360463 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69360647 | 69360762 | 69360647 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69360768 | 69360943 | 69360768 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69361136 | 69361341 | 69361136 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69361369 | 69361571 | 69361369 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69363199 | 69363390 | 69363199 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69363652 | 69363748 | 69363652 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69363758 | 69364004 | 69363758 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69364053 | 69364294 | 69364053 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69364653 | 69364859 | 69364653 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69364986 | 69365115 | 69364986 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
chr2_2 | CDS | 69365233 | 69365710 | 69365233 | ID=Msa0267660-mRNA-1:cds;Parent=Msa0267660-mRNA-1 |
Gene Sequence |
Protein sequence |