AlfalfaGEDB | Msa0319940

M. sativa cultivar zhongmu-4 / Msa0319940

KEGG: -
GO: -
PFAM: PF00182.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0319940	AFK41090.1	83.019	318	2	1	1	266	1	318	0.0	525

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0319940	sp\|Q9LSP9\|CTL2_ARATH	64.808	287	49	1	21	255	33	319	9.77e-133	381

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0018060	Msa0319940	0.808127	3.607691e-50	-8.615850e-47
Msa0040660	Msa0319940	0.817135	3.858030e-52	-8.615850e-47
Msa0081520	Msa0319940	0.832677	8.248160e-56	-8.615850e-47
Msa0108160	Msa0319940	0.806364	8.525222e-50	-8.615850e-47
Msa0154320	Msa0319940	0.823364	1.441247e-53	-8.615850e-47
Msa0160130	Msa0319940	0.802185	6.325301e-49	-8.615850e-47
Msa0173890	Msa0319940	0.830113	3.525377e-55	-8.615850e-47
Msa0174450	Msa0319940	0.807146	5.828946e-50	-8.615850e-47
Msa0199960	Msa0319940	0.877216	7.508291e-69	-8.615850e-47
Msa0225100	Msa0319940	0.802068	6.685207e-49	-8.615850e-47
Msa0225320	Msa0319940	0.801869	7.344088e-49	-8.615850e-47
Msa0227950	Msa0319940	0.806471	8.093128e-50	-8.615850e-47
Msa0228250	Msa0319940	0.816375	5.712069e-52	-8.615850e-47
Msa0242490	Msa0319940	0.898085	7.493670e-77	-8.615850e-47
Msa0243600	Msa0319940	0.905397	4.480388e-80	-8.615850e-47
Msa0248970	Msa0319940	0.802225	6.206672e-49	-8.615850e-47
Msa0255620	Msa0319940	0.836237	1.052872e-56	-8.615850e-47
Msa0264590	Msa0319940	0.807768	4.301148e-50	-8.615850e-47
Msa0267660	Msa0319940	0.807237	5.575858e-50	-8.615850e-47
Msa0267920	Msa0319940	0.800668	1.293770e-48	-8.615850e-47
Msa0280690	Msa0319940	0.891169	5.076167e-74	-8.615850e-47
Msa0282220	Msa0319940	0.890654	8.105890e-74	-8.615850e-47
Msa0287740	Msa0319940	0.802841	4.632084e-49	-8.615850e-47
Msa0294720	Msa0319940	0.814085	1.844058e-51	-8.615850e-47
Msa0297790	Msa0319940	0.801475	8.848896e-49	-8.615850e-47
Msa0300180	Msa0319940	0.850091	2.123792e-60	-8.615850e-47
Msa0300210	Msa0319940	0.821920	3.123437e-53	-8.615850e-47
Msa0314170	Msa0319940	0.826042	3.369871e-54	-8.615850e-47
Msa0319940	Msa0333070	0.832211	1.076150e-55	-8.615850e-47
Msa0319940	Msa0335800	0.814038	1.888245e-51	-8.615850e-47
Msa0319940	Msa0337540	0.843160	1.661952e-58	-8.615850e-47
Msa0319940	Msa0339980	0.808625	2.825572e-50	-8.615850e-47
Msa0319940	Msa0378720	0.809268	2.057741e-50	-8.615850e-47
Msa0319940	Msa0388770	0.804761	1.849380e-49	-8.615850e-47
Msa0319940	Msa0392380	0.852949	3.299896e-61	-8.615850e-47
Msa0319940	Msa0405710	0.800565	1.357674e-48	-8.615850e-47
Msa0319940	Msa0425170	0.801423	9.069896e-49	-8.615850e-47
Msa0319940	Msa0430260	0.805106	1.566512e-49	-8.615850e-47
Msa0319940	Msa0440320	0.849144	3.903760e-60	-8.615850e-47
Msa0319940	Msa0487500	0.858744	6.676223e-63	-8.615850e-47
Msa0319940	Msa0514170	0.810835	9.458435e-51	-8.615850e-47
Msa0319940	Msa0589690	0.801973	6.993484e-49	-8.615850e-47
Msa0319940	Msa0596610	0.806741	7.099016e-50	-8.615850e-47
Msa0319940	Msa0609430	0.800863	1.180497e-48	-8.615850e-47
Msa0319940	Msa0626450	0.840827	6.877416e-58	-8.615850e-47
Msa0319940	Msa0626490	0.840574	8.009118e-58	-8.615850e-47
Msa0319940	Msa0629600	0.825431	4.705095e-54	-8.615850e-47
Msa0319940	Msa0664600	0.839255	1.768189e-57	-8.615850e-47
Msa0319940	Msa0667370	0.832005	1.209847e-55	-8.615850e-47
Msa0319940	Msa0675130	0.805843	1.097457e-49	-8.615850e-47
Msa0319940	Msa0688820	0.839283	1.738509e-57	-8.615850e-47
Msa0319940	Msa0692060	0.803335	3.661928e-49	-8.615850e-47
Msa0319940	Msa0712590	0.807640	4.580309e-50	-8.615850e-47
Msa0319940	Msa0742740	0.811037	8.554703e-51	-8.615850e-47
Msa0319940	Msa0752940	0.815281	1.001670e-51	-8.615850e-47
Msa0319940	Msa0783980	0.819144	1.355231e-52	-8.615850e-47
Msa0319940	Msa0799950	0.812193	4.795584e-51	-8.615850e-47
Msa0319940	Msa0823820	0.815508	8.920772e-52	-8.615850e-47
Msa0319940	Msa0839190	0.808471	3.047653e-50	-8.615850e-47
Msa0319940	Msa0863010	0.807436	5.060059e-50	-8.615850e-47
Msa0319940	Msa0968350	0.844230	8.599797e-59	-8.615850e-47
Msa0319940	Msa0974060	0.845482	3.951310e-59	-8.615850e-47
Msa0319940	Msa1024740	0.835228	1.895969e-56	-8.615850e-47
Msa0319940	Msa1037550	0.841380	4.921611e-58	-8.615850e-47
Msa0319940	Msa1063500	0.838625	2.573096e-57	-8.615850e-47
Msa0319940	Msa1078930	0.851023	1.162339e-60	-8.615850e-47
Msa0319940	Msa1108790	0.825342	4.939108e-54	-8.615850e-47
Msa0319940	Msa1113800	0.818307	2.098384e-52	-8.615850e-47
Msa0319940	Msa1123930	0.842939	1.903295e-58	-8.615850e-47
Msa0319940	Msa1130430	0.824510	7.760839e-54	-8.615850e-47
Msa0319940	Msa1152510	0.805988	1.023224e-49	-8.615850e-47
Msa0319940	Msa1160500	0.807023	6.189085e-50	-8.615850e-47
Msa0319940	Msa1169230	0.820958	5.208698e-53	-8.615850e-47
Msa0319940	Msa1222590	0.837780	4.247942e-57	-8.615850e-47
Msa0319940	Msa1227940	0.805381	1.372299e-49	-8.615850e-47
Msa0319940	Msa1264570	0.818215	2.201514e-52	-8.615850e-47
Msa0319940	Msa1340700	0.888783	4.344575e-73	-8.615850e-47
Msa0319940	Msa1356830	0.824281	8.786711e-54	-8.615850e-47
Msa0319940	Msa1426070	0.846442	2.165854e-59	-8.615850e-47
Msa0319940	Msa1430750	0.838433	2.883653e-57	-8.615850e-47
Msa0319940	Msa1436420	0.866326	3.094541e-65	-8.615850e-47
Msa0319940	Msa1437940	0.818614	1.788020e-52	-8.615850e-47
Msa0319940	Msa1440960	0.822094	2.847150e-53	-8.615850e-47
Msa0319940	Msa1465010	0.803127	4.043859e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0319940	MtrunA17_Chr2g0294721	83.019	318	2	1	1	266	1	318	0.0	524
Msa0319940	MtrunA17_Chr7g0221751	57.692	312	77	3	5	264	11	319	1.16e-123	355
Msa0319940	MtrunA17_Chr1g0206111	56.169	308	82	2	8	263	15	321	1.10e-120	347
Msa0319940	MtrunA17_Chr8g0370851	32.129	249	111	7	56	255	80	319	8.47e-35	127
Msa0319940	MtrunA17_Chr8g0370831	30.435	230	115	5	62	255	88	308	2.17e-32	120
Msa0319940	MtrunA17_Chr8g0370821	30.000	240	110	5	65	255	100	330	2.47e-30	115
Msa0319940	MtrunA17_Chr3g0145981	29.461	241	111	6	65	255	100	331	1.90e-28	111
Msa0319940	MtrunA17_Chr7g0270841	30.040	253	115	8	56	256	36	278	6.02e-24	97.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0319940	AT3G16920.2	64.808	287	49	1	21	255	57	343	6.50e-134	382
Msa0319940	AT3G16920.1	64.808	287	49	1	21	255	33	319	9.93e-134	381
Msa0319940	AT1G05850.1	57.843	306	73	4	9	261	14	316	5.22e-122	351
Msa0319940	AT1G05850.2	57.843	306	73	4	9	261	14	316	5.22e-122	351
Msa0319940	AT3G12500.1	31.746	252	109	7	56	255	86	326	3.80e-33	123
Msa0319940	AT1G02360.1	28.926	242	112	7	65	255	39	271	7.97e-23	94.7
Msa0319940	AT1G02360.2	28.926	242	112	7	65	255	85	317	1.06e-22	95.5
Msa0319940	AT1G02360.3	28.926	242	112	7	65	255	91	323	1.38e-22	95.1
Msa0319940	AT4G01700.1	27.273	242	116	7	65	255	47	279	1.49e-20	89.0
Msa0319940	AT2G43590.1	35.246	122	50	5	128	249	172	264	1.62e-11	63.5

Find 56 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGGCACATGCTTCTGGATTT+TGG	0.066004	2_4:+20027732	Msa0319940:CDS
CCTCTTGGATTTGGTACTTC+TGG	0.205257	2_4:+20027794	Msa0319940:CDS
CTTTATTACCTTGATTTATT+AGG	0.217041	2_4:+20029401	Msa0319940:CDS
TCGAGAACAAATTCTCAAAT+TGG	0.234101	2_4:-20027694	None:intergenic
GATCCAACGGCACATGCTTC+TGG	0.270290	2_4:+20027725	Msa0319940:CDS
CTTTATGAGCCTCTTGGATT+TGG	0.284586	2_4:+20027785	Msa0319940:CDS
AATAACAGGAATTACAACTA+TGG	0.369875	2_4:+20029092	Msa0319940:intron
ATTATGATGCTATTATATCT+TGG	0.384373	2_4:+20029601	Msa0319940:three_prime_UTR
ACCAAACCCAGGTACCCTTT+TGG	0.387909	2_4:-20029294	None:intergenic
TCCAAAAGGGTACCTGGGTT+TGG	0.397032	2_4:+20029293	Msa0319940:CDS
GCTGCACTTTATGAGCCTCT+TGG	0.400754	2_4:+20027779	Msa0319940:CDS
AAAATGACACATTGTCCAAA+AGG	0.404045	2_4:+20029279	Msa0319940:CDS
TAGCCTTCCAAGCAGCACTA+TGG	0.414638	2_4:+20029183	Msa0319940:CDS
TCCAAGCAGCACTATGGAAA+TGG	0.416055	2_4:+20029189	Msa0319940:CDS
CTTGGATTTGGTACTTCTGG+TGG	0.426651	2_4:+20027797	Msa0319940:CDS
GCACAAGAGAGAATTTCATT+AGG	0.427545	2_4:-20029446	None:intergenic
GTTTGGTTGTGAATTAATCT+TGG	0.429733	2_4:+20029535	Msa0319940:three_prime_UTR
ATTGCAACAATATTAGTGAT+AGG	0.439273	2_4:+20027539	Msa0319940:CDS
GGTTGTGAATTAATCTTGGT+TGG	0.452231	2_4:+20029539	Msa0319940:three_prime_UTR
CTTCAAGTTGTTGAAGAAGA+AGG	0.457398	2_4:-20029500	None:intergenic
GTTTAATAGATCCACTTTCA+AGG	0.461556	2_4:-20029129	None:intergenic
TTGAGAATTTGTTCTCGAAA+CGG	0.470513	2_4:+20027699	Msa0319940:CDS
CCATTGGTGAAAACAGTAAA+GGG	0.473968	2_4:+20027584	Msa0319940:CDS
ACATTGTCCAAAAGGGTACC+TGG	0.475692	2_4:+20029287	Msa0319940:CDS
TACCTTGATTTATTAGGAGT+TGG	0.479087	2_4:+20029407	Msa0319940:CDS
TTTGTTCTATGTATTCTGGA+TGG	0.487919	2_4:-20029151	None:intergenic
TTTCCATAGTGCTGCTTGGA+AGG	0.493210	2_4:-20029186	None:intergenic
TCCATTTCCATAGTGCTGCT+TGG	0.499368	2_4:-20029190	None:intergenic
TACCAACTCCTAATAAATCA+AGG	0.502150	2_4:-20029409	None:intergenic
GCCATTGGTGAAAACAGTAA+AGG	0.508561	2_4:+20027583	Msa0319940:CDS
TTGCTTCATTATCAGAACCT+TGG	0.516239	2_4:-20029355	None:intergenic
TATCACTAATATTGTTGCAA+TGG	0.516493	2_4:-20027537	None:intergenic
AAATGACACATTGTCCAAAA+GGG	0.536961	2_4:+20029280	Msa0319940:CDS
ATTAGGAGTTGGTAGAGAAG+AGG	0.537611	2_4:+20029418	Msa0319940:CDS
GGAGTTGGTAGAGAAGAGGC+AGG	0.547951	2_4:+20029422	Msa0319940:CDS
GGAAAGAAACTATGTGACAA+AGG	0.557916	2_4:+20027605	Msa0319940:CDS
ACCATATAAAACATTTATTG+TGG	0.559699	2_4:-20029318	None:intergenic
ATTGAATTCTGACTTACAAG+AGG	0.565093	2_4:-20027876	None:intergenic
AGAAACTATGTGACAAAGGG+TGG	0.568667	2_4:+20027609	Msa0319940:CDS
AATTGGGGAAGCCTTGAAAG+TGG	0.572731	2_4:+20029118	Msa0319940:CDS
GAAAGAAACTATGTGACAAA+GGG	0.573194	2_4:+20027606	Msa0319940:CDS
TTTATTGTGGCACCAAACCC+AGG	0.577162	2_4:-20029305	None:intergenic
GGTACTTCTGGTGGAAAGCA+TGG	0.578987	2_4:+20027806	Msa0319940:CDS
AATCCAGAAGCATGTGCCGT+TGG	0.586749	2_4:-20027728	None:intergenic
GGTGATCAAGTTTGTGACCA+AGG	0.587507	2_4:+20029338	Msa0319940:CDS
AAAGCATGGTGGTCAGAAAG+AGG	0.601879	2_4:+20027820	Msa0319940:CDS
GAAACTATGTGACAAAGGGT+GGG	0.610521	2_4:+20027610	Msa0319940:CDS
CATTGTCCAAAAGGGTACCT+GGG	0.612126	2_4:+20029288	Msa0319940:CDS
GAAGAAGAAGGTGAGCCAGT+AGG	0.612374	2_4:-20029488	None:intergenic
ACAAACATCAGTGAAGCCAT+TGG	0.621601	2_4:+20027568	Msa0319940:CDS
AAGGGTGGGAATGTAAAGGT+TGG	0.625286	2_4:+20027624	Msa0319940:CDS
CTCGAAACGGAATGATCCAA+CGG	0.641016	2_4:+20027712	Msa0319940:CDS
GAGTTGGTAGAGAAGAGGCA+GGG	0.664610	2_4:+20029423	Msa0319940:CDS
GACAAAGGGTGGGAATGTAA+AGG	0.668253	2_4:+20027620	Msa0319940:CDS
CCAGAAGTACCAAATCCAAG+AGG	0.703394	2_4:-20027794	None:intergenic
ACTTCTGGTGGAAAGCATGG+TGG	0.730500	2_4:+20027809	Msa0319940:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAAAAACTTCAATTTTTT+TGG	+	chr2_4:20028610-20028629	Msa0319940:intron	10.0%
!!!	ATATGATTTGAATATATTTT+TGG	+	chr2_4:20029642-20029661	Msa0319940:three_prime_UTR	10.0%
!!!	AATCAAAAATGAATTTTTTA+TGG	+	chr2_4:20029801-20029820	Msa0319940:three_prime_UTR	10.0%
!!!	AAAAAAAACTTCAATTTTTT+TGG	+	chr2_4:20028610-20028629	Msa0319940:intron	10.0%
!!!	ATATGATTTGAATATATTTT+TGG	+	chr2_4:20029642-20029661	Msa0319940:three_prime_UTR	10.0%
!!!	AATCAAAAATGAATTTTTTA+TGG	+	chr2_4:20029801-20029820	Msa0319940:three_prime_UTR	10.0%
!!!	TTATGTTTTTTAGTTCATTA+TGG	+	chr2_4:20028038-20028057	Msa0319940:intron	15.0%
!!!	AATTGAAGTTTTTTTTTTGA+GGG	-	chr2_4:20028606-20028625	None:intergenic	15.0%
!!!	AAATTGAAGTTTTTTTTTTG+AGG	-	chr2_4:20028607-20028626	None:intergenic	15.0%
!!	GGAAAAATAATGAATTATAT+AGG	+	chr2_4:20028672-20028691	Msa0319940:intron	15.0%
!!!	TTTAAGATGATAAAATTGTA+AGG	+	chr2_4:20028741-20028760	Msa0319940:intron	15.0%
!!!	TTATGTTTTTTAGTTCATTA+TGG	+	chr2_4:20028038-20028057	Msa0319940:intron	15.0%
!!!	AATTGAAGTTTTTTTTTTGA+GGG	-	chr2_4:20028606-20028625	None:intergenic	15.0%
!!!	AAATTGAAGTTTTTTTTTTG+AGG	-	chr2_4:20028607-20028626	None:intergenic	15.0%
!!	GGAAAAATAATGAATTATAT+AGG	+	chr2_4:20028672-20028691	Msa0319940:intron	15.0%
!!!	TTTAAGATGATAAAATTGTA+AGG	+	chr2_4:20028741-20028760	Msa0319940:intron	15.0%
!!	TAATAGAAAAAATGTCCATT+TGG	-	chr2_4:20027516-20027535	None:intergenic	20.0%
!!	TATAAAATGATCAATTCATG+TGG	+	chr2_4:20027933-20027952	Msa0319940:intron	20.0%
!!	ATAAAATGATCAATTCATGT+GGG	+	chr2_4:20027934-20027953	Msa0319940:intron	20.0%
!!	ATACAGTAAAATTTCAAACT+TGG	+	chr2_4:20028173-20028192	Msa0319940:intron	20.0%
!!!	TATATATTAGCTAACTTGTA+TGG	+	chr2_4:20028520-20028539	Msa0319940:intron	20.0%
!!	AAATGTGAATACCAATAAAT+AGG	-	chr2_4:20028936-20028955	None:intergenic	20.0%
!!	AATTACAACTATGGAAAAAT+TGG	+	chr2_4:20029101-20029120	Msa0319940:CDS	20.0%
!!	ATTACAACTATGGAAAAATT+GGG	+	chr2_4:20029102-20029121	Msa0319940:CDS	20.0%
!!	ACCATATAAAACATTTATTG+TGG	-	chr2_4:20029321-20029340	None:intergenic	20.0%
!!	CTTTATTACCTTGATTTATT+AGG	+	chr2_4:20029401-20029420	Msa0319940:CDS	20.0%
!!	ATTATGATGCTATTATATCT+TGG	+	chr2_4:20029601-20029620	Msa0319940:three_prime_UTR	20.0%
!!	TAATAGAAAAAATGTCCATT+TGG	-	chr2_4:20027516-20027535	None:intergenic	20.0%
!!	TATAAAATGATCAATTCATG+TGG	+	chr2_4:20027933-20027952	Msa0319940:intron	20.0%
!!	ATAAAATGATCAATTCATGT+GGG	+	chr2_4:20027934-20027953	Msa0319940:intron	20.0%
!!	ATACAGTAAAATTTCAAACT+TGG	+	chr2_4:20028173-20028192	Msa0319940:intron	20.0%
!!!	TATATATTAGCTAACTTGTA+TGG	+	chr2_4:20028520-20028539	Msa0319940:intron	20.0%
!!	AAATGTGAATACCAATAAAT+AGG	-	chr2_4:20028936-20028955	None:intergenic	20.0%
!!	AATTACAACTATGGAAAAAT+TGG	+	chr2_4:20029101-20029120	Msa0319940:CDS	20.0%
!!	ATTACAACTATGGAAAAATT+GGG	+	chr2_4:20029102-20029121	Msa0319940:CDS	20.0%
!!	ACCATATAAAACATTTATTG+TGG	-	chr2_4:20029321-20029340	None:intergenic	20.0%
!!	CTTTATTACCTTGATTTATT+AGG	+	chr2_4:20029401-20029420	Msa0319940:CDS	20.0%
!!	ATTATGATGCTATTATATCT+TGG	+	chr2_4:20029601-20029620	Msa0319940:three_prime_UTR	20.0%
!	TATCACTAATATTGTTGCAA+TGG	-	chr2_4:20027540-20027559	None:intergenic	25.0%
!	ATTGCAACAATATTAGTGAT+AGG	+	chr2_4:20027539-20027558	Msa0319940:CDS	25.0%
!	TAAAATGATCAATTCATGTG+GGG	+	chr2_4:20027935-20027954	Msa0319940:intron	25.0%
!	AGAACATGATCAATTCATTT+AGG	+	chr2_4:20027991-20028010	Msa0319940:intron	25.0%
!	GAACATGATCAATTCATTTA+GGG	+	chr2_4:20027992-20028011	Msa0319940:intron	25.0%
!	AACATGATCAATTCATTTAG+GGG	+	chr2_4:20027993-20028012	Msa0319940:intron	25.0%
!!	CATTTGATGATTCATAGATT+TGG	+	chr2_4:20028143-20028162	Msa0319940:intron	25.0%
!!	ACTCATGGTAAAAAAGTATA+GGG	-	chr2_4:20028433-20028452	None:intergenic	25.0%
!!	AACTCATGGTAAAAAAGTAT+AGG	-	chr2_4:20028434-20028453	None:intergenic	25.0%
!!!	TTTTTTACCATGAGTTGTAT+AGG	+	chr2_4:20028438-20028457	Msa0319940:intron	25.0%
!	ATGTTGTTAGATTATTAGAG+TGG	+	chr2_4:20028706-20028725	Msa0319940:intron	25.0%
!	TGAATACCAATAAATAGGTA+TGG	-	chr2_4:20028931-20028950	None:intergenic	25.0%
!	GTTGTAATTCCTGTTATTAA+AGG	-	chr2_4:20029090-20029109	None:intergenic	25.0%
!	AATAACAGGAATTACAACTA+TGG	+	chr2_4:20029092-20029111	Msa0319940:intron	25.0%
!	TTACAACTATGGAAAAATTG+GGG	+	chr2_4:20029103-20029122	Msa0319940:CDS	25.0%
!!!	ATGATGTTTTTGTTGGAAAT+TGG	+	chr2_4:20029246-20029265	Msa0319940:CDS	25.0%
!!	GCCACAATAAATGTTTTATA+TGG	+	chr2_4:20029317-20029336	Msa0319940:CDS	25.0%
!!	TGAAGAGATTTTTACTTGTT+TGG	+	chr2_4:20029518-20029537	Msa0319940:exon	25.0%
!	TATCACTAATATTGTTGCAA+TGG	-	chr2_4:20027540-20027559	None:intergenic	25.0%
!	ATTGCAACAATATTAGTGAT+AGG	+	chr2_4:20027539-20027558	Msa0319940:CDS	25.0%
!	TAAAATGATCAATTCATGTG+GGG	+	chr2_4:20027935-20027954	Msa0319940:intron	25.0%
!	AGAACATGATCAATTCATTT+AGG	+	chr2_4:20027991-20028010	Msa0319940:intron	25.0%
!	GAACATGATCAATTCATTTA+GGG	+	chr2_4:20027992-20028011	Msa0319940:intron	25.0%
!	AACATGATCAATTCATTTAG+GGG	+	chr2_4:20027993-20028012	Msa0319940:intron	25.0%
!!	CATTTGATGATTCATAGATT+TGG	+	chr2_4:20028143-20028162	Msa0319940:intron	25.0%
!!	ACTCATGGTAAAAAAGTATA+GGG	-	chr2_4:20028433-20028452	None:intergenic	25.0%
!!	AACTCATGGTAAAAAAGTAT+AGG	-	chr2_4:20028434-20028453	None:intergenic	25.0%
!!!	TTTTTTACCATGAGTTGTAT+AGG	+	chr2_4:20028438-20028457	Msa0319940:intron	25.0%
!	ATGTTGTTAGATTATTAGAG+TGG	+	chr2_4:20028706-20028725	Msa0319940:intron	25.0%
!	TGAATACCAATAAATAGGTA+TGG	-	chr2_4:20028931-20028950	None:intergenic	25.0%
!	GTTGTAATTCCTGTTATTAA+AGG	-	chr2_4:20029090-20029109	None:intergenic	25.0%
!	AATAACAGGAATTACAACTA+TGG	+	chr2_4:20029092-20029111	Msa0319940:intron	25.0%
!	TTACAACTATGGAAAAATTG+GGG	+	chr2_4:20029103-20029122	Msa0319940:CDS	25.0%
!!!	ATGATGTTTTTGTTGGAAAT+TGG	+	chr2_4:20029246-20029265	Msa0319940:CDS	25.0%
!!	GCCACAATAAATGTTTTATA+TGG	+	chr2_4:20029317-20029336	Msa0319940:CDS	25.0%
!!	TGAAGAGATTTTTACTTGTT+TGG	+	chr2_4:20029518-20029537	Msa0319940:exon	25.0%
	GAAAGAAACTATGTGACAAA+GGG	+	chr2_4:20027606-20027625	Msa0319940:CDS	30.0%
	TCGAGAACAAATTCTCAAAT+TGG	-	chr2_4:20027697-20027716	None:intergenic	30.0%
!	TTGAGAATTTGTTCTCGAAA+CGG	+	chr2_4:20027699-20027718	Msa0319940:CDS	30.0%
	ATTGAATTCTGACTTACAAG+AGG	-	chr2_4:20027879-20027898	None:intergenic	30.0%
	AAAATGATCAATTCATGTGG+GGG	+	chr2_4:20027936-20027955	Msa0319940:intron	30.0%
	GTCAAATATCATGCAATTGA+GGG	-	chr2_4:20028064-20028083	None:intergenic	30.0%
	TGTCAAATATCATGCAATTG+AGG	-	chr2_4:20028065-20028084	None:intergenic	30.0%
!!	ACCAAACTTGGTTTTTGTTT+AGG	+	chr2_4:20028651-20028670	Msa0319940:intron	30.0%
	TCCTAAACAAAAACCAAGTT+TGG	-	chr2_4:20028655-20028674	None:intergenic	30.0%
	GGTTCTTGAAATATTGTTTC+AGG	+	chr2_4:20028762-20028781	Msa0319940:intron	30.0%
	TCTTGAAATATTGTTTCAGG+TGG	+	chr2_4:20028765-20028784	Msa0319940:intron	30.0%
!	AATATTGTTTCAGGTGGTTA+TGG	+	chr2_4:20028771-20028790	Msa0319940:intron	30.0%
!	ATATTGTTTCAGGTGGTTAT+GGG	+	chr2_4:20028772-20028791	Msa0319940:intron	30.0%
	TCATCACAATAGAATTGATC+AGG	-	chr2_4:20028852-20028871	None:intergenic	30.0%
	TTCTTGATGCCTTTAATAAC+AGG	+	chr2_4:20029078-20029097	Msa0319940:intron	30.0%
	GTTTAATAGATCCACTTTCA+AGG	-	chr2_4:20029132-20029151	None:intergenic	30.0%
	TTTGTTCTATGTATTCTGGA+TGG	-	chr2_4:20029154-20029173	None:intergenic	30.0%
!	GCATTTTGTTCTATGTATTC+TGG	-	chr2_4:20029158-20029177	None:intergenic	30.0%
	TTTCCAACAAAAACATCATG+TGG	-	chr2_4:20029245-20029264	None:intergenic	30.0%
!!!	GACAATGTGTCATTTTTTGT+TGG	-	chr2_4:20029275-20029294	None:intergenic	30.0%
	AAAATGACACATTGTCCAAA+AGG	+	chr2_4:20029279-20029298	Msa0319940:CDS	30.0%
	AAATGACACATTGTCCAAAA+GGG	+	chr2_4:20029280-20029299	Msa0319940:CDS	30.0%
	TACCTTGATTTATTAGGAGT+TGG	+	chr2_4:20029407-20029426	Msa0319940:CDS	30.0%
	TACCAACTCCTAATAAATCA+AGG	-	chr2_4:20029412-20029431	None:intergenic	30.0%
	GTTTGGTTGTGAATTAATCT+TGG	+	chr2_4:20029535-20029554	Msa0319940:three_prime_UTR	30.0%
!!!	TGAATTTTTTATGGTCACGA+AGG	+	chr2_4:20029810-20029829	Msa0319940:three_prime_UTR	30.0%
	GAAAGAAACTATGTGACAAA+GGG	+	chr2_4:20027606-20027625	Msa0319940:CDS	30.0%
	TCGAGAACAAATTCTCAAAT+TGG	-	chr2_4:20027697-20027716	None:intergenic	30.0%
!	TTGAGAATTTGTTCTCGAAA+CGG	+	chr2_4:20027699-20027718	Msa0319940:CDS	30.0%
	ATTGAATTCTGACTTACAAG+AGG	-	chr2_4:20027879-20027898	None:intergenic	30.0%
	AAAATGATCAATTCATGTGG+GGG	+	chr2_4:20027936-20027955	Msa0319940:intron	30.0%
	GTCAAATATCATGCAATTGA+GGG	-	chr2_4:20028064-20028083	None:intergenic	30.0%
	TGTCAAATATCATGCAATTG+AGG	-	chr2_4:20028065-20028084	None:intergenic	30.0%
!!	ACCAAACTTGGTTTTTGTTT+AGG	+	chr2_4:20028651-20028670	Msa0319940:intron	30.0%
	TCCTAAACAAAAACCAAGTT+TGG	-	chr2_4:20028655-20028674	None:intergenic	30.0%
	GGTTCTTGAAATATTGTTTC+AGG	+	chr2_4:20028762-20028781	Msa0319940:intron	30.0%
	TCTTGAAATATTGTTTCAGG+TGG	+	chr2_4:20028765-20028784	Msa0319940:intron	30.0%
!	AATATTGTTTCAGGTGGTTA+TGG	+	chr2_4:20028771-20028790	Msa0319940:intron	30.0%
!	ATATTGTTTCAGGTGGTTAT+GGG	+	chr2_4:20028772-20028791	Msa0319940:intron	30.0%
	TCATCACAATAGAATTGATC+AGG	-	chr2_4:20028852-20028871	None:intergenic	30.0%
	TTCTTGATGCCTTTAATAAC+AGG	+	chr2_4:20029078-20029097	Msa0319940:intron	30.0%
	GTTTAATAGATCCACTTTCA+AGG	-	chr2_4:20029132-20029151	None:intergenic	30.0%
	TTTGTTCTATGTATTCTGGA+TGG	-	chr2_4:20029154-20029173	None:intergenic	30.0%
!	GCATTTTGTTCTATGTATTC+TGG	-	chr2_4:20029158-20029177	None:intergenic	30.0%
	TTTCCAACAAAAACATCATG+TGG	-	chr2_4:20029245-20029264	None:intergenic	30.0%
!!!	GACAATGTGTCATTTTTTGT+TGG	-	chr2_4:20029275-20029294	None:intergenic	30.0%
	AAAATGACACATTGTCCAAA+AGG	+	chr2_4:20029279-20029298	Msa0319940:CDS	30.0%
	AAATGACACATTGTCCAAAA+GGG	+	chr2_4:20029280-20029299	Msa0319940:CDS	30.0%
	TACCTTGATTTATTAGGAGT+TGG	+	chr2_4:20029407-20029426	Msa0319940:CDS	30.0%
	TACCAACTCCTAATAAATCA+AGG	-	chr2_4:20029412-20029431	None:intergenic	30.0%
	GTTTGGTTGTGAATTAATCT+TGG	+	chr2_4:20029535-20029554	Msa0319940:three_prime_UTR	30.0%
!!!	TGAATTTTTTATGGTCACGA+AGG	+	chr2_4:20029810-20029829	Msa0319940:three_prime_UTR	30.0%
	CCATTGGTGAAAACAGTAAA+GGG	+	chr2_4:20027584-20027603	Msa0319940:CDS	35.0%
	GGAAAGAAACTATGTGACAA+AGG	+	chr2_4:20027605-20027624	Msa0319940:CDS	35.0%
	GACTGAAATTGTAACCACAA+AGG	+	chr2_4:20028277-20028296	Msa0319940:intron	35.0%
	TATGTGTGTGTGTTGAGATA+TGG	-	chr2_4:20028305-20028324	None:intergenic	35.0%
!	GTTTTGTCCTATACAACTCA+TGG	-	chr2_4:20028448-20028467	None:intergenic	35.0%
!	TATTGTTTCAGGTGGTTATG+GGG	+	chr2_4:20028773-20028792	Msa0319940:intron	35.0%
	AAACAAGTAATGAGTCTCAG+TGG	-	chr2_4:20029009-20029028	None:intergenic	35.0%
	ACAAAAACATCATGTGGTGA+AGG	-	chr2_4:20029239-20029258	None:intergenic	35.0%
!!	TCACCACATGATGTTTTTGT+TGG	+	chr2_4:20029239-20029258	Msa0319940:CDS	35.0%
	TTGCTTCATTATCAGAACCT+TGG	-	chr2_4:20029358-20029377	None:intergenic	35.0%
	GCACAAGAGAGAATTTCATT+AGG	-	chr2_4:20029449-20029468	None:intergenic	35.0%
!!	CTTCAAGTTGTTGAAGAAGA+AGG	-	chr2_4:20029503-20029522	None:intergenic	35.0%
	GGTTGTGAATTAATCTTGGT+TGG	+	chr2_4:20029539-20029558	Msa0319940:three_prime_UTR	35.0%
	CCATTGGTGAAAACAGTAAA+GGG	+	chr2_4:20027584-20027603	Msa0319940:CDS	35.0%
	GGAAAGAAACTATGTGACAA+AGG	+	chr2_4:20027605-20027624	Msa0319940:CDS	35.0%
	GACTGAAATTGTAACCACAA+AGG	+	chr2_4:20028277-20028296	Msa0319940:intron	35.0%
	TATGTGTGTGTGTTGAGATA+TGG	-	chr2_4:20028305-20028324	None:intergenic	35.0%
!	GTTTTGTCCTATACAACTCA+TGG	-	chr2_4:20028448-20028467	None:intergenic	35.0%
!	TATTGTTTCAGGTGGTTATG+GGG	+	chr2_4:20028773-20028792	Msa0319940:intron	35.0%
	AAACAAGTAATGAGTCTCAG+TGG	-	chr2_4:20029009-20029028	None:intergenic	35.0%
	ACAAAAACATCATGTGGTGA+AGG	-	chr2_4:20029239-20029258	None:intergenic	35.0%
!!	TCACCACATGATGTTTTTGT+TGG	+	chr2_4:20029239-20029258	Msa0319940:CDS	35.0%
	TTGCTTCATTATCAGAACCT+TGG	-	chr2_4:20029358-20029377	None:intergenic	35.0%
	GCACAAGAGAGAATTTCATT+AGG	-	chr2_4:20029449-20029468	None:intergenic	35.0%
!!	CTTCAAGTTGTTGAAGAAGA+AGG	-	chr2_4:20029503-20029522	None:intergenic	35.0%
	GGTTGTGAATTAATCTTGGT+TGG	+	chr2_4:20029539-20029558	Msa0319940:three_prime_UTR	35.0%
	ACAAACATCAGTGAAGCCAT+TGG	+	chr2_4:20027568-20027587	Msa0319940:CDS	40.0%
	GCCATTGGTGAAAACAGTAA+AGG	+	chr2_4:20027583-20027602	Msa0319940:CDS	40.0%
!	CCCTTTACTGTTTTCACCAA+TGG	-	chr2_4:20027587-20027606	None:intergenic	40.0%
	AGAAACTATGTGACAAAGGG+TGG	+	chr2_4:20027609-20027628	Msa0319940:CDS	40.0%
	GAAACTATGTGACAAAGGGT+GGG	+	chr2_4:20027610-20027629	Msa0319940:CDS	40.0%
	CTTTATGAGCCTCTTGGATT+TGG	+	chr2_4:20027785-20027804	Msa0319940:CDS	40.0%
!!!	AAAGAGGTTGCTGCTTTTCT+TGG	+	chr2_4:20027836-20027855	Msa0319940:CDS	40.0%
	ACATCGATAATCGTTGGATC+AGG	-	chr2_4:20028242-20028261	None:intergenic	40.0%
	TTTCAGTCATTCACGTAGTC+AGG	-	chr2_4:20028265-20028284	None:intergenic	40.0%
	GTTGAGATATGGATCCTTTG+TGG	-	chr2_4:20028294-20028313	None:intergenic	40.0%
	TTCCGTTGTAAAGAGTCAAG+CGG	+	chr2_4:20028337-20028356	Msa0319940:intron	40.0%
!!	ACACACTAAGTGCTGAAAAG+TGG	+	chr2_4:20028366-20028385	Msa0319940:intron	40.0%
	TAGCGCTTATACACCAAACT+TGG	+	chr2_4:20028639-20028658	Msa0319940:intron	40.0%
	ATGGGGCTTATGCTACAATA+AGG	+	chr2_4:20028818-20028837	Msa0319940:intron	40.0%
	TTAACCTATCCATGTAGTCC+TGG	+	chr2_4:20028882-20028901	Msa0319940:intron	40.0%
	AATAAATAGGTATGGCGCCA+CGG	-	chr2_4:20028923-20028942	None:intergenic	40.0%
	GCATCAAGAAAGACAACGTA+AGG	-	chr2_4:20029068-20029087	None:intergenic	40.0%
!!	GAAGGTATGTGTTTTTCTGG+TGG	-	chr2_4:20029221-20029240	None:intergenic	40.0%
!!	GGTGAAGGTATGTGTTTTTC+TGG	-	chr2_4:20029224-20029243	None:intergenic	40.0%
!!	ATTAGGAGTTGGTAGAGAAG+AGG	+	chr2_4:20029418-20029437	Msa0319940:CDS	40.0%
!!!	CAAGCTGCTTTTAAACCTAC+TGG	+	chr2_4:20029473-20029492	Msa0319940:CDS	40.0%
	ACAAACATCAGTGAAGCCAT+TGG	+	chr2_4:20027568-20027587	Msa0319940:CDS	40.0%
	GCCATTGGTGAAAACAGTAA+AGG	+	chr2_4:20027583-20027602	Msa0319940:CDS	40.0%
!	CCCTTTACTGTTTTCACCAA+TGG	-	chr2_4:20027587-20027606	None:intergenic	40.0%
	AGAAACTATGTGACAAAGGG+TGG	+	chr2_4:20027609-20027628	Msa0319940:CDS	40.0%
	GAAACTATGTGACAAAGGGT+GGG	+	chr2_4:20027610-20027629	Msa0319940:CDS	40.0%
	CTTTATGAGCCTCTTGGATT+TGG	+	chr2_4:20027785-20027804	Msa0319940:CDS	40.0%
!!!	AAAGAGGTTGCTGCTTTTCT+TGG	+	chr2_4:20027836-20027855	Msa0319940:CDS	40.0%
	ACATCGATAATCGTTGGATC+AGG	-	chr2_4:20028242-20028261	None:intergenic	40.0%
	TTTCAGTCATTCACGTAGTC+AGG	-	chr2_4:20028265-20028284	None:intergenic	40.0%
	GTTGAGATATGGATCCTTTG+TGG	-	chr2_4:20028294-20028313	None:intergenic	40.0%
	TTCCGTTGTAAAGAGTCAAG+CGG	+	chr2_4:20028337-20028356	Msa0319940:intron	40.0%
!!	ACACACTAAGTGCTGAAAAG+TGG	+	chr2_4:20028366-20028385	Msa0319940:intron	40.0%
	TAGCGCTTATACACCAAACT+TGG	+	chr2_4:20028639-20028658	Msa0319940:intron	40.0%
	ATGGGGCTTATGCTACAATA+AGG	+	chr2_4:20028818-20028837	Msa0319940:intron	40.0%
	TTAACCTATCCATGTAGTCC+TGG	+	chr2_4:20028882-20028901	Msa0319940:intron	40.0%
	AATAAATAGGTATGGCGCCA+CGG	-	chr2_4:20028923-20028942	None:intergenic	40.0%
	GCATCAAGAAAGACAACGTA+AGG	-	chr2_4:20029068-20029087	None:intergenic	40.0%
!!	GAAGGTATGTGTTTTTCTGG+TGG	-	chr2_4:20029221-20029240	None:intergenic	40.0%
!!	GGTGAAGGTATGTGTTTTTC+TGG	-	chr2_4:20029224-20029243	None:intergenic	40.0%
!!	ATTAGGAGTTGGTAGAGAAG+AGG	+	chr2_4:20029418-20029437	Msa0319940:CDS	40.0%
!!!	CAAGCTGCTTTTAAACCTAC+TGG	+	chr2_4:20029473-20029492	Msa0319940:CDS	40.0%
	GACAAAGGGTGGGAATGTAA+AGG	+	chr2_4:20027620-20027639	Msa0319940:CDS	45.0%
	AAGGGTGGGAATGTAAAGGT+TGG	+	chr2_4:20027624-20027643	Msa0319940:CDS	45.0%
	CTCGAAACGGAATGATCCAA+CGG	+	chr2_4:20027712-20027731	Msa0319940:CDS	45.0%
!	GGCACATGCTTCTGGATTTT+GGG	+	chr2_4:20027733-20027752	Msa0319940:CDS	45.0%
!!	CCAGAAGTACCAAATCCAAG+AGG	-	chr2_4:20027797-20027816	None:intergenic	45.0%
!	CCTCTTGGATTTGGTACTTC+TGG	+	chr2_4:20027794-20027813	Msa0319940:CDS	45.0%
!	CTTGGATTTGGTACTTCTGG+TGG	+	chr2_4:20027797-20027816	Msa0319940:CDS	45.0%
	AAAGCATGGTGGTCAGAAAG+AGG	+	chr2_4:20027820-20027839	Msa0319940:CDS	45.0%
!!!	GCTGCTTTTCTTGGTCATGT+TGG	+	chr2_4:20027845-20027864	Msa0319940:CDS	45.0%
	GTCAGGACATCGATAATCGT+TGG	-	chr2_4:20028248-20028267	None:intergenic	45.0%
	TAGCATAAGCCCCATGCAAA+GGG	-	chr2_4:20028813-20028832	None:intergenic	45.0%
	GTGGCGCCATACCTATTTAT+TGG	+	chr2_4:20028922-20028941	Msa0319940:intron	45.0%
	TAATGAGTCTCAGTGGAACG+TGG	-	chr2_4:20029002-20029021	None:intergenic	45.0%
	AATTGGGGAAGCCTTGAAAG+TGG	+	chr2_4:20029118-20029137	Msa0319940:CDS	45.0%
!!	TTTCCATAGTGCTGCTTGGA+AGG	-	chr2_4:20029189-20029208	None:intergenic	45.0%
	TCCAAGCAGCACTATGGAAA+TGG	+	chr2_4:20029189-20029208	Msa0319940:CDS	45.0%
!	TCCATTTCCATAGTGCTGCT+TGG	-	chr2_4:20029193-20029212	None:intergenic	45.0%
!!	ACATTGTCCAAAAGGGTACC+TGG	+	chr2_4:20029287-20029306	Msa0319940:CDS	45.0%
!!	CATTGTCCAAAAGGGTACCT+GGG	+	chr2_4:20029288-20029307	Msa0319940:CDS	45.0%
	TTTATTGTGGCACCAAACCC+AGG	-	chr2_4:20029308-20029327	None:intergenic	45.0%
	GGTGATCAAGTTTGTGACCA+AGG	+	chr2_4:20029338-20029357	Msa0319940:CDS	45.0%
	GACAAAGGGTGGGAATGTAA+AGG	+	chr2_4:20027620-20027639	Msa0319940:CDS	45.0%
	AAGGGTGGGAATGTAAAGGT+TGG	+	chr2_4:20027624-20027643	Msa0319940:CDS	45.0%
	CTCGAAACGGAATGATCCAA+CGG	+	chr2_4:20027712-20027731	Msa0319940:CDS	45.0%
!	GGCACATGCTTCTGGATTTT+GGG	+	chr2_4:20027733-20027752	Msa0319940:CDS	45.0%
!!	CCAGAAGTACCAAATCCAAG+AGG	-	chr2_4:20027797-20027816	None:intergenic	45.0%
!	CCTCTTGGATTTGGTACTTC+TGG	+	chr2_4:20027794-20027813	Msa0319940:CDS	45.0%
!	CTTGGATTTGGTACTTCTGG+TGG	+	chr2_4:20027797-20027816	Msa0319940:CDS	45.0%
	AAAGCATGGTGGTCAGAAAG+AGG	+	chr2_4:20027820-20027839	Msa0319940:CDS	45.0%
!!!	GCTGCTTTTCTTGGTCATGT+TGG	+	chr2_4:20027845-20027864	Msa0319940:CDS	45.0%
	GTCAGGACATCGATAATCGT+TGG	-	chr2_4:20028248-20028267	None:intergenic	45.0%
	TAGCATAAGCCCCATGCAAA+GGG	-	chr2_4:20028813-20028832	None:intergenic	45.0%
	GTGGCGCCATACCTATTTAT+TGG	+	chr2_4:20028922-20028941	Msa0319940:intron	45.0%
	TAATGAGTCTCAGTGGAACG+TGG	-	chr2_4:20029002-20029021	None:intergenic	45.0%
	AATTGGGGAAGCCTTGAAAG+TGG	+	chr2_4:20029118-20029137	Msa0319940:CDS	45.0%
!!	TTTCCATAGTGCTGCTTGGA+AGG	-	chr2_4:20029189-20029208	None:intergenic	45.0%
	TCCAAGCAGCACTATGGAAA+TGG	+	chr2_4:20029189-20029208	Msa0319940:CDS	45.0%
!	TCCATTTCCATAGTGCTGCT+TGG	-	chr2_4:20029193-20029212	None:intergenic	45.0%
!!	ACATTGTCCAAAAGGGTACC+TGG	+	chr2_4:20029287-20029306	Msa0319940:CDS	45.0%
!!	CATTGTCCAAAAGGGTACCT+GGG	+	chr2_4:20029288-20029307	Msa0319940:CDS	45.0%
	TTTATTGTGGCACCAAACCC+AGG	-	chr2_4:20029308-20029327	None:intergenic	45.0%
	GGTGATCAAGTTTGTGACCA+AGG	+	chr2_4:20029338-20029357	Msa0319940:CDS	45.0%
!	AATCCAGAAGCATGTGCCGT+TGG	-	chr2_4:20027731-20027750	None:intergenic	50.0%
!	CGGCACATGCTTCTGGATTT+TGG	+	chr2_4:20027732-20027751	Msa0319940:CDS	50.0%
	GCTGCACTTTATGAGCCTCT+TGG	+	chr2_4:20027779-20027798	Msa0319940:CDS	50.0%
	GGTACTTCTGGTGGAAAGCA+TGG	+	chr2_4:20027806-20027825	Msa0319940:CDS	50.0%
!	ACTTCTGGTGGAAAGCATGG+TGG	+	chr2_4:20027809-20027828	Msa0319940:CDS	50.0%
	CGCCGCTTGACTCTTTACAA+CGG	-	chr2_4:20028342-20028361	None:intergenic	50.0%
!	TGTTTCAGGTGGTTATGGGG+TGG	+	chr2_4:20028776-20028795	Msa0319940:intron	50.0%
	GTAGCATAAGCCCCATGCAA+AGG	-	chr2_4:20028814-20028833	None:intergenic	50.0%
	TGCACCAGGACTACATGGAT+AGG	-	chr2_4:20028889-20028908	None:intergenic	50.0%
	TATGCTGCACCAGGACTACA+TGG	-	chr2_4:20028894-20028913	None:intergenic	50.0%
	AGTCCTGGTGCAGCATACTA+TGG	+	chr2_4:20028897-20028916	Msa0319940:intron	50.0%
	TAGCCTTCCAAGCAGCACTA+TGG	+	chr2_4:20029183-20029202	Msa0319940:CDS	50.0%
!!	TCCAAAAGGGTACCTGGGTT+TGG	+	chr2_4:20029293-20029312	Msa0319940:CDS	50.0%
!	ACCAAACCCAGGTACCCTTT+TGG	-	chr2_4:20029297-20029316	None:intergenic	50.0%
!!	GAGTTGGTAGAGAAGAGGCA+GGG	+	chr2_4:20029423-20029442	Msa0319940:CDS	50.0%
	GAAGAAGAAGGTGAGCCAGT+AGG	-	chr2_4:20029491-20029510	None:intergenic	50.0%
!	AATCCAGAAGCATGTGCCGT+TGG	-	chr2_4:20027731-20027750	None:intergenic	50.0%
!	CGGCACATGCTTCTGGATTT+TGG	+	chr2_4:20027732-20027751	Msa0319940:CDS	50.0%
	GCTGCACTTTATGAGCCTCT+TGG	+	chr2_4:20027779-20027798	Msa0319940:CDS	50.0%
	GGTACTTCTGGTGGAAAGCA+TGG	+	chr2_4:20027806-20027825	Msa0319940:CDS	50.0%
!	ACTTCTGGTGGAAAGCATGG+TGG	+	chr2_4:20027809-20027828	Msa0319940:CDS	50.0%
	CGCCGCTTGACTCTTTACAA+CGG	-	chr2_4:20028342-20028361	None:intergenic	50.0%
!	TGTTTCAGGTGGTTATGGGG+TGG	+	chr2_4:20028776-20028795	Msa0319940:intron	50.0%
	GTAGCATAAGCCCCATGCAA+AGG	-	chr2_4:20028814-20028833	None:intergenic	50.0%
	TGCACCAGGACTACATGGAT+AGG	-	chr2_4:20028889-20028908	None:intergenic	50.0%
	TATGCTGCACCAGGACTACA+TGG	-	chr2_4:20028894-20028913	None:intergenic	50.0%
	AGTCCTGGTGCAGCATACTA+TGG	+	chr2_4:20028897-20028916	Msa0319940:intron	50.0%
	TAGCCTTCCAAGCAGCACTA+TGG	+	chr2_4:20029183-20029202	Msa0319940:CDS	50.0%
!!	TCCAAAAGGGTACCTGGGTT+TGG	+	chr2_4:20029293-20029312	Msa0319940:CDS	50.0%
!	ACCAAACCCAGGTACCCTTT+TGG	-	chr2_4:20029297-20029316	None:intergenic	50.0%
!!	GAGTTGGTAGAGAAGAGGCA+GGG	+	chr2_4:20029423-20029442	Msa0319940:CDS	50.0%
	GAAGAAGAAGGTGAGCCAGT+AGG	-	chr2_4:20029491-20029510	None:intergenic	50.0%
	GATCCAACGGCACATGCTTC+TGG	+	chr2_4:20027725-20027744	Msa0319940:CDS	55.0%
	GTGGTTATGGGGTGGCTACT+GGG	+	chr2_4:20028784-20028803	Msa0319940:intron	55.0%
	TGGTTATGGGGTGGCTACTG+GGG	+	chr2_4:20028785-20028804	Msa0319940:intron	55.0%
	TACTGGGGGACCCTTTGCAT+GGG	+	chr2_4:20028800-20028819	Msa0319940:intron	55.0%
!!	GGAGTTGGTAGAGAAGAGGC+AGG	+	chr2_4:20029422-20029441	Msa0319940:CDS	55.0%
	GATCCAACGGCACATGCTTC+TGG	+	chr2_4:20027725-20027744	Msa0319940:CDS	55.0%
	GTGGTTATGGGGTGGCTACT+GGG	+	chr2_4:20028784-20028803	Msa0319940:intron	55.0%
	TGGTTATGGGGTGGCTACTG+GGG	+	chr2_4:20028785-20028804	Msa0319940:intron	55.0%
	TACTGGGGGACCCTTTGCAT+GGG	+	chr2_4:20028800-20028819	Msa0319940:intron	55.0%
!!	GGAGTTGGTAGAGAAGAGGC+AGG	+	chr2_4:20029422-20029441	Msa0319940:CDS	55.0%
	GGTGGTTATGGGGTGGCTAC+TGG	+	chr2_4:20028783-20028802	Msa0319940:intron	60.0%
	GGTTATGGGGTGGCTACTGG+GGG	+	chr2_4:20028786-20028805	Msa0319940:intron	60.0%
	CTACTGGGGGACCCTTTGCA+TGG	+	chr2_4:20028799-20028818	Msa0319940:intron	60.0%
	ACTGGGGGACCCTTTGCATG+GGG	+	chr2_4:20028801-20028820	Msa0319940:intron	60.0%
	CGGCCATAGTATGCTGCACC+AGG	-	chr2_4:20028903-20028922	None:intergenic	60.0%
	GGTGCAGCATACTATGGCCG+TGG	+	chr2_4:20028903-20028922	Msa0319940:intron	60.0%
	GGTGGTTATGGGGTGGCTAC+TGG	+	chr2_4:20028783-20028802	Msa0319940:intron	60.0%
	GGTTATGGGGTGGCTACTGG+GGG	+	chr2_4:20028786-20028805	Msa0319940:intron	60.0%
	CTACTGGGGGACCCTTTGCA+TGG	+	chr2_4:20028799-20028818	Msa0319940:intron	60.0%
	ACTGGGGGACCCTTTGCATG+GGG	+	chr2_4:20028801-20028820	Msa0319940:intron	60.0%
	CGGCCATAGTATGCTGCACC+AGG	-	chr2_4:20028903-20028922	None:intergenic	60.0%
	GGTGCAGCATACTATGGCCG+TGG	+	chr2_4:20028903-20028922	Msa0319940:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	20027506	20029865	20027506	ID=Msa0319940;Name=Msa0319940
chr2_4	mRNA	20027506	20029865	20027506	ID=Msa0319940-mRNA-1;Parent=Msa0319940;Name=Msa0319940-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0\|0\|0.5\|1\|0\|0.5\|2\|345\|266
chr2_4	exon	20027506	20027885	20027506	ID=Msa0319940-mRNA-1:exon:7403;Parent=Msa0319940-mRNA-1
chr2_4	exon	20029100	20029865	20029100	ID=Msa0319940-mRNA-1:exon:7404;Parent=Msa0319940-mRNA-1
chr2_4	CDS	20027506	20027885	20027506	ID=Msa0319940-mRNA-1:cds;Parent=Msa0319940-mRNA-1
chr2_4	CDS	20029100	20029520	20029100	ID=Msa0319940-mRNA-1:cds;Parent=Msa0319940-mRNA-1
chr2_4	three_prime_UTR	20029521	20029865	20029521	ID=Msa0319940-mRNA-1:three_prime_utr;Parent=Msa0319940-mRNA-1

Gene Sequence

>Msa0319940

ATGAATTCCAAATGGACATTTTTTCTATTAGCCATTGCAACAATATTAGTGATAGGAAATGCACAAACATCAGTGAAGCCATTGGTGAAAACAGTAAAGGGAAAGAAACTATGTGACAAAGGGTGGGAATGTAAAGGTTGGTCAGTGTATTGTTGCAATGAAACTATATCTGATTATTTTCAAACATACCAATTTGAGAATTTGTTCTCGAAACGGAATGATCCAACGGCACATGCTTCTGGATTTTGGGACTATCGTTCTTTTATTACTGCTGCTGCACTTTATGAGCCTCTTGGATTTGGTACTTCTGGTGGAAAGCATGGTGGTCAGAAAGAGGTTGCTGCTTTTCTTGGTCATGTTGGAAGCAAGACCTCTTGTAAGAATTACAACTATGGAAAAATTGGGGAAGCCTTGAAAGTGGATCTATTAAACCATCCAGAATACATAGAACAAAATGCAACATTAGCCTTCCAAGCAGCACTATGGAAATGGATGACACCACCAGAAAAACACATACCTTCACCACATGATGTTTTTGTTGGAAATTGGAAACCAACAAAAAATGACACATTGTCCAAAAGGGTACCTGGGTTTGGTGCCACAATAAATGTTTTATATGGTGATCAAGTTTGTGACCAAGGTTCTGATAATGAAGCAATGAGCAACATAATTTCTCATTATCTTTATTACCTTGATTTATTAGGAGTTGGTAGAGAAGAGGCAGGGCCTAATGAAATTCTCTCTTGTGCTGAACAAGCTGCTTTTAAACCTACTGGCTCACCTTCTTCTTCAACAACTTGA

Protein sequence

>Msa0319940

MNSKWTFFLLAIATILVIGNAQTSVKPLVKTVKGKKLCDKGWECKGWSVYCCNETISDYFQTYQFENLFSKRNDPTAHASGFWDYRSFITAAALYEPLGFGTSGGKHGGQKEVAAFLGHVGSKTSCKNYNYGKIGEALKVDLLNHPEYIEQNATLAFQAALWKWMTPPEKHIPSPHDVFVGNWKPTKNDTLSKRVPGFGATINVLYGDQVCDQGSDNEAMSNIISHYLYYLDLLGVGREEAGPNEILSCAEQAAFKPTGSPSSSTT*