Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440320 | XP_003598051.1 | 98.322 | 298 | 5 | 0 | 1 | 298 | 1 | 298 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440320 | sp|Q9T0F7|GXM2_ARATH | 61.204 | 299 | 99 | 4 | 1 | 298 | 1 | 283 | 8.02e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440320 | G7J059 | 98.322 | 298 | 5 | 0 | 1 | 298 | 1 | 298 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0440320 | 0.801602 | 8.331765e-49 | -8.615850e-47 |
| Msa0002710 | Msa0440320 | 0.802264 | 6.091674e-49 | -8.615850e-47 |
| Msa0025330 | Msa0440320 | 0.800003 | 1.767060e-48 | -8.615850e-47 |
| Msa0048540 | Msa0440320 | 0.812111 | 4.995901e-51 | -8.615850e-47 |
| Msa0072900 | Msa0440320 | 0.804076 | 2.569087e-49 | -8.615850e-47 |
| Msa0081520 | Msa0440320 | 0.847010 | 1.515251e-59 | -8.615850e-47 |
| Msa0097090 | Msa0440320 | 0.802771 | 4.789996e-49 | -8.615850e-47 |
| Msa0108160 | Msa0440320 | 0.830900 | 2.263530e-55 | -8.615850e-47 |
| Msa0121090 | Msa0440320 | 0.800323 | 1.521251e-48 | -8.615850e-47 |
| Msa0136650 | Msa0440320 | 0.811535 | 6.668439e-51 | -8.615850e-47 |
| Msa0173890 | Msa0440320 | 0.825489 | 4.558345e-54 | -8.615850e-47 |
| Msa0174450 | Msa0440320 | 0.860713 | 1.705136e-63 | -8.615850e-47 |
| Msa0193850 | Msa0440320 | 0.809368 | 1.958698e-50 | -8.615850e-47 |
| Msa0199960 | Msa0440320 | 0.805077 | 1.588640e-49 | -8.615850e-47 |
| Msa0205840 | Msa0440320 | 0.816209 | 6.221971e-52 | -8.615850e-47 |
| Msa0206840 | Msa0440320 | 0.821233 | 4.503190e-53 | -8.615850e-47 |
| Msa0225100 | Msa0440320 | 0.827775 | 1.298804e-54 | -8.615850e-47 |
| Msa0225460 | Msa0440320 | 0.803792 | 2.943273e-49 | -8.615850e-47 |
| Msa0369790 | Msa0440320 | 0.801731 | 7.840210e-49 | -8.615850e-47 |
| Msa0373310 | Msa0440320 | 0.811536 | 6.665065e-51 | -8.615850e-47 |
| Msa0378720 | Msa0440320 | 0.800986 | 1.113946e-48 | -8.615850e-47 |
| Msa0380620 | Msa0440320 | 0.812016 | 5.239693e-51 | -8.615850e-47 |
| Msa0392380 | Msa0440320 | 0.985464 | 1.201699e-163 | -8.615850e-47 |
| Msa0415610 | Msa0440320 | 0.800580 | 1.348234e-48 | -8.615850e-47 |
| Msa0421890 | Msa0440320 | 0.819036 | 1.433937e-52 | -8.615850e-47 |
| Msa0424160 | Msa0440320 | 0.802310 | 5.960199e-49 | -8.615850e-47 |
| Msa0430260 | Msa0440320 | 0.825517 | 4.490790e-54 | -8.615850e-47 |
| Msa0440320 | Msa0467770 | 0.828082 | 1.095623e-54 | -8.615850e-47 |
| Msa0440320 | Msa0472950 | 0.807509 | 4.881190e-50 | -8.615850e-47 |
| Msa0440320 | Msa0487500 | 0.982204 | 1.709788e-154 | -8.615850e-47 |
| Msa0440320 | Msa0488790 | 0.824575 | 7.492308e-54 | -8.615850e-47 |
| Msa0440320 | Msa0514170 | 0.813369 | 2.651160e-51 | -8.615850e-47 |
| Msa0440320 | Msa0528570 | 0.810243 | 1.269992e-50 | -8.615850e-47 |
| Msa0440320 | Msa0546800 | 0.823260 | 1.524042e-53 | -8.615850e-47 |
| Msa0440320 | Msa0547110 | 0.810729 | 9.971989e-51 | -8.615850e-47 |
| Msa0440320 | Msa0557140 | 0.813717 | 2.221850e-51 | -8.615850e-47 |
| Msa0440320 | Msa0557460 | 0.816226 | 6.167565e-52 | -8.615850e-47 |
| Msa0440320 | Msa0571290 | 0.823610 | 1.262775e-53 | -8.615850e-47 |
| Msa0440320 | Msa0573380 | 0.818327 | 2.077159e-52 | -8.615850e-47 |
| Msa0440320 | Msa0589510 | 0.815364 | 9.603353e-52 | -8.615850e-47 |
| Msa0440320 | Msa0589690 | 0.830231 | 3.300370e-55 | -8.615850e-47 |
| Msa0440320 | Msa0608400 | 0.831088 | 2.034843e-55 | -8.615850e-47 |
| Msa0440320 | Msa0615420 | 0.830514 | 2.814315e-55 | -8.615850e-47 |
| Msa0440320 | Msa0623910 | 0.823518 | 1.327012e-53 | -8.615850e-47 |
| Msa0440320 | Msa0626450 | 0.883868 | 3.115902e-71 | -8.615850e-47 |
| Msa0440320 | Msa0626490 | 0.880791 | 4.103393e-70 | -8.615850e-47 |
| Msa0440320 | Msa0629600 | 0.805818 | 1.111185e-49 | -8.615850e-47 |
| Msa0440320 | Msa0641210 | 0.808604 | 2.854090e-50 | -8.615850e-47 |
| Msa0440320 | Msa0648900 | 0.814608 | 1.412917e-51 | -8.615850e-47 |
| Msa0440320 | Msa0664600 | 0.881767 | 1.825416e-70 | -8.615850e-47 |
| Msa0440320 | Msa0667370 | 0.819694 | 1.015384e-52 | -8.615850e-47 |
| Msa0440320 | Msa0683960 | 0.828408 | 9.142529e-55 | -8.615850e-47 |
| Msa0440320 | Msa0691400 | 0.800109 | 1.681590e-48 | -8.615850e-47 |
| Msa0440320 | Msa0697160 | 0.801447 | 8.964370e-49 | -8.615850e-47 |
| Msa0440320 | Msa0698640 | 0.851567 | 8.158539e-61 | -8.615850e-47 |
| Msa0440320 | Msa0738700 | 0.809305 | 2.020592e-50 | -8.615850e-47 |
| Msa0440320 | Msa0741220 | 0.815288 | 9.980903e-52 | -8.615850e-47 |
| Msa0440320 | Msa0742740 | 0.820167 | 7.914737e-53 | -8.615850e-47 |
| Msa0440320 | Msa0754390 | 0.809192 | 2.137005e-50 | -8.615850e-47 |
| Msa0440320 | Msa0756490 | 0.813494 | 2.488053e-51 | -8.615850e-47 |
| Msa0440320 | Msa0756620 | 0.802538 | 5.349290e-49 | -8.615850e-47 |
| Msa0440320 | Msa0765240 | 0.825643 | 4.190678e-54 | -8.615850e-47 |
| Msa0440320 | Msa0768990 | 0.813910 | 2.015174e-51 | -8.615850e-47 |
| Msa0440320 | Msa0783530 | 0.807696 | 4.455546e-50 | -8.615850e-47 |
| Msa0440320 | Msa0795870 | 0.800469 | 1.420641e-48 | -8.615850e-47 |
| Msa0440320 | Msa0799950 | 0.810469 | 1.134837e-50 | -8.615850e-47 |
| Msa0440320 | Msa0820390 | 0.806465 | 8.118537e-50 | -8.615850e-47 |
| Msa0440320 | Msa0823820 | 0.824560 | 7.555007e-54 | -8.615850e-47 |
| Msa0440320 | Msa0835490 | 0.821103 | 4.824081e-53 | -8.615850e-47 |
| Msa0440320 | Msa0863010 | 0.821217 | 4.541543e-53 | -8.615850e-47 |
| Msa0440320 | Msa0875290 | 0.800697 | 1.276271e-48 | -8.615850e-47 |
| Msa0440320 | Msa0967870 | 0.810135 | 1.339822e-50 | -8.615850e-47 |
| Msa0440320 | Msa0968350 | 0.865822 | 4.468732e-65 | -8.615850e-47 |
| Msa0440320 | Msa0974060 | 0.819083 | 1.399376e-52 | -8.615850e-47 |
| Msa0440320 | Msa0981320 | 0.806027 | 1.003785e-49 | -8.615850e-47 |
| Msa0440320 | Msa1020480 | 0.806276 | 8.897766e-50 | -8.615850e-47 |
| Msa0440320 | Msa1020510 | 0.829969 | 3.823613e-55 | -8.615850e-47 |
| Msa0440320 | Msa1023500 | 0.831760 | 1.390425e-55 | -8.615850e-47 |
| Msa0440320 | Msa1024740 | 0.813164 | 2.939496e-51 | -8.615850e-47 |
| Msa0440320 | Msa1037550 | 0.828593 | 8.245544e-55 | -8.615850e-47 |
| Msa0440320 | Msa1078930 | 0.877739 | 4.934310e-69 | -8.615850e-47 |
| Msa0440320 | Msa1100730 | 0.834802 | 2.427588e-56 | -8.615850e-47 |
| Msa0440320 | Msa1106500 | 0.805277 | 1.442873e-49 | -8.615850e-47 |
| Msa0440320 | Msa1108790 | 0.824691 | 7.037118e-54 | -8.615850e-47 |
| Msa0440320 | Msa1123930 | 0.861526 | 9.647074e-64 | -8.615850e-47 |
| Msa0440320 | Msa1140210 | 0.810576 | 1.076226e-50 | -8.615850e-47 |
| Msa0440320 | Msa1160920 | 0.805133 | 1.546632e-49 | -8.615850e-47 |
| Msa0440320 | Msa1169230 | 0.851150 | 1.070249e-60 | -8.615850e-47 |
| Msa0440320 | Msa1173280 | 0.814056 | 1.870550e-51 | -8.615850e-47 |
| Msa0440320 | Msa1222590 | 0.815271 | 1.007127e-51 | -8.615850e-47 |
| Msa0440320 | Msa1227990 | 0.820823 | 5.594737e-53 | -8.615850e-47 |
| Msa0440320 | Msa1269480 | 0.815856 | 7.461215e-52 | -8.615850e-47 |
| Msa0440320 | Msa1308140 | 0.805454 | 1.324683e-49 | -8.615850e-47 |
| Msa0440320 | Msa1327650 | 0.831290 | 1.815309e-55 | -8.615850e-47 |
| Msa0440320 | Msa1340700 | 0.824957 | 6.089380e-54 | -8.615850e-47 |
| Msa0440320 | Msa1348090 | 0.816174 | 6.335751e-52 | -8.615850e-47 |
| Msa0440320 | Msa1353460 | 0.810734 | 9.948512e-51 | -8.615850e-47 |
| Msa0440320 | Msa1356830 | 0.835809 | 1.351807e-56 | -8.615850e-47 |
| Msa0440320 | Msa1384180 | 0.809931 | 1.482672e-50 | -8.615850e-47 |
| Msa0440320 | Msa1422420 | 0.801459 | 8.916051e-49 | -8.615850e-47 |
| Msa0440320 | Msa1426070 | 0.874207 | 8.087668e-68 | -8.615850e-47 |
| Msa0440320 | Msa1430750 | 0.815817 | 7.612342e-52 | -8.615850e-47 |
| Msa0440320 | Msa1433810 | 0.800287 | 1.546695e-48 | -8.615850e-47 |
| Msa0440320 | Msa1434480 | 0.835059 | 2.091494e-56 | -8.615850e-47 |
| Msa0440320 | Msa1436420 | 0.845622 | 3.621333e-59 | -8.615850e-47 |
| Msa0440320 | Msa1437940 | 0.829443 | 5.133068e-55 | -8.615850e-47 |
| Msa0440320 | Msa1440960 | 0.880474 | 5.328925e-70 | -8.615850e-47 |
| Msa0440320 | Msa1459360 | 0.809737 | 1.632145e-50 | -8.615850e-47 |
| Msa0242490 | Msa0440320 | 0.807493 | 4.920983e-50 | -8.615850e-47 |
| Msa0243600 | Msa0440320 | 0.873818 | 1.094847e-67 | -8.615850e-47 |
| Msa0248970 | Msa0440320 | 0.819824 | 9.482964e-53 | -8.615850e-47 |
| Msa0249540 | Msa0440320 | 0.821712 | 3.490538e-53 | -8.615850e-47 |
| Msa0266180 | Msa0440320 | 0.816621 | 5.032441e-52 | -8.615850e-47 |
| Msa0267660 | Msa0440320 | 0.844344 | 8.012386e-59 | -8.615850e-47 |
| Msa0280690 | Msa0440320 | 0.806900 | 6.571724e-50 | -8.615850e-47 |
| Msa0282220 | Msa0440320 | 0.857487 | 1.578801e-62 | -8.615850e-47 |
| Msa0287740 | Msa0440320 | 0.825621 | 4.242057e-54 | -8.615850e-47 |
| Msa0288140 | Msa0440320 | 0.811269 | 7.618005e-51 | -8.615850e-47 |
| Msa0307270 | Msa0440320 | 0.802501 | 5.445276e-49 | -8.615850e-47 |
| Msa0314170 | Msa0440320 | 0.850054 | 2.176149e-60 | -8.615850e-47 |
| Msa0319940 | Msa0440320 | 0.849144 | 3.903760e-60 | -8.615850e-47 |
| Msa0337540 | Msa0440320 | 0.800253 | 1.571985e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440320 | MtrunA17_Chr3g0077611 | 98.322 | 298 | 5 | 0 | 1 | 298 | 1 | 298 | 0.0 | 613 |
| Msa0440320 | MtrunA17_Chr8g0377381 | 45.000 | 240 | 118 | 5 | 72 | 297 | 58 | 297 | 2.15e-68 | 214 |
| Msa0440320 | MtrunA17_Chr3g0122451 | 46.977 | 215 | 109 | 4 | 76 | 285 | 60 | 274 | 2.08e-66 | 209 |
| Msa0440320 | MtrunA17_Chr7g0225381 | 46.411 | 209 | 104 | 3 | 84 | 286 | 79 | 285 | 2.14e-58 | 189 |
| Msa0440320 | MtrunA17_Chr7g0225261 | 45.933 | 209 | 105 | 3 | 84 | 286 | 79 | 285 | 4.39e-58 | 188 |
| Msa0440320 | MtrunA17_Chr4g0044461 | 42.791 | 215 | 119 | 2 | 77 | 287 | 68 | 282 | 6.04e-58 | 188 |
| Msa0440320 | MtrunA17_Chr4g0044451 | 42.925 | 212 | 117 | 2 | 80 | 287 | 72 | 283 | 1.01e-55 | 182 |
| Msa0440320 | MtrunA17_Chr4g0053231 | 38.839 | 224 | 131 | 4 | 66 | 283 | 60 | 283 | 9.02e-51 | 169 |
| Msa0440320 | MtrunA17_Chr4g0057371 | 36.797 | 231 | 136 | 6 | 74 | 298 | 71 | 297 | 7.18e-42 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440320 | AT4G09990.1 | 61.204 | 299 | 99 | 4 | 1 | 298 | 1 | 283 | 8.16e-133 | 379 |
| Msa0440320 | AT1G33800.1 | 67.886 | 246 | 77 | 2 | 53 | 298 | 47 | 290 | 6.60e-128 | 366 |
| Msa0440320 | AT1G09610.1 | 65.079 | 252 | 80 | 4 | 52 | 298 | 34 | 282 | 5.41e-122 | 351 |
| Msa0440320 | AT1G71690.1 | 55.116 | 303 | 115 | 7 | 1 | 298 | 9 | 295 | 4.08e-113 | 328 |
| Msa0440320 | AT1G67330.1 | 50.935 | 214 | 101 | 3 | 78 | 287 | 65 | 278 | 1.49e-73 | 228 |
| Msa0440320 | AT1G27930.1 | 49.528 | 212 | 104 | 2 | 78 | 286 | 62 | 273 | 1.65e-71 | 223 |
| Msa0440320 | AT5G67210.1 | 36.029 | 272 | 157 | 6 | 18 | 283 | 30 | 290 | 1.15e-52 | 175 |
| Msa0440320 | AT3G50220.1 | 36.397 | 272 | 162 | 7 | 18 | 283 | 31 | 297 | 1.08e-50 | 170 |
| Msa0440320 | AT2G15440.1 | 37.054 | 224 | 131 | 5 | 83 | 297 | 81 | 303 | 3.27e-50 | 169 |
| Msa0440320 | AT4G24910.1 | 34.694 | 196 | 117 | 4 | 99 | 285 | 104 | 297 | 2.74e-29 | 114 |
Find 70 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCAACTTCTTGGTCTT+TGG | 0.164120 | 3_3:+7451806 | Msa0440320:CDS |
| AAAATCACCTTGCAACTTCT+TGG | 0.221414 | 3_3:+7451799 | Msa0440320:CDS |
| AAATGTGGATTAGCACTTAA+AGG | 0.223364 | 3_3:+7452049 | Msa0440320:CDS |
| AGTGATGAACTAATGAAAAT+TGG | 0.261741 | 3_3:+7451980 | Msa0440320:CDS |
| AAATCAATTTCATGGACAAT+AGG | 0.306327 | 3_3:-7452353 | None:intergenic |
| ATTGCTAGGAATAGAGAAAA+TGG | 0.307486 | 3_3:+7452184 | Msa0440320:CDS |
| TTTGTGCATGTTGGTGTTAT+AGG | 0.311759 | 3_3:-7451671 | None:intergenic |
| CCAACGTTGGGAACTTTGAT+TGG | 0.316396 | 3_3:-7451919 | None:intergenic |
| ACCAAGTCATAGGGCACGTT+TGG | 0.318589 | 3_3:+7452324 | Msa0440320:CDS |
| TCCATGTCTTGTCTTCTTCC+AGG | 0.323320 | 3_3:-7451886 | None:intergenic |
| GGGTACTTCGATGGCGCGCC+GGG | 0.332994 | 3_3:+7452130 | Msa0440320:CDS |
| TTGTGCATGTTGGTGTTATA+GGG | 0.335274 | 3_3:-7451670 | None:intergenic |
| AACTTCTTGGTCTTTGGATT+AGG | 0.336773 | 3_3:+7451812 | Msa0440320:CDS |
| ATTGGATGAGAGTTGTGTTT+TGG | 0.350418 | 3_3:-7451477 | None:intergenic |
| ACTTCAATATACCAAGTCAT+AGG | 0.375565 | 3_3:+7452314 | Msa0440320:CDS |
| ATACAGCTGGTTTGATTGCT+AGG | 0.379409 | 3_3:+7452170 | Msa0440320:CDS |
| AATCAATTTCATGGACAATA+GGG | 0.382464 | 3_3:-7452352 | None:intergenic |
| TGTTTGTTCATGATGTTGAT+AGG | 0.396580 | 3_3:+7452218 | Msa0440320:CDS |
| GATGATGACTAGTTTGAGAT+TGG | 0.409528 | 3_3:-7451495 | None:intergenic |
| TGGTTGAGAAAATGAGAAAA+TGG | 0.434558 | 3_3:-7451561 | None:intergenic |
| ATGAGTGCTATTTATACAGC+TGG | 0.441985 | 3_3:+7452157 | Msa0440320:CDS |
| TTGGTGTTTGAAGTTGTTGT+GGG | 0.443623 | 3_3:-7451584 | None:intergenic |
| TCTCTTGAATTGTTTGTTGA+GGG | 0.447760 | 3_3:-7451748 | None:intergenic |
| CTTGTCTTCTTCCAGGAAAA+CGG | 0.456850 | 3_3:-7451879 | None:intergenic |
| TGCATAATGGATTAATGCAT+TGG | 0.464703 | 3_3:-7451711 | None:intergenic |
| TTCTTTGTGAAGGTTATTTG+AGG | 0.465004 | 3_3:+7452269 | Msa0440320:CDS |
| CCAAGTCATAGGGCACGTTT+GGG | 0.466887 | 3_3:+7452325 | Msa0440320:CDS |
| TCTTTGTGAAGGTTATTTGA+GGG | 0.475343 | 3_3:+7452270 | Msa0440320:CDS |
| GGGGTACTTCGATGGCGCGC+CGG | 0.481478 | 3_3:+7452129 | Msa0440320:CDS |
| CCCAAACGTGCCCTATGACT+TGG | 0.483562 | 3_3:-7452325 | None:intergenic |
| GTTGGTGTTTGAAGTTGTTG+TGG | 0.491866 | 3_3:-7451585 | None:intergenic |
| ATCATGGTGGATGCACCAAC+GGG | 0.492498 | 3_3:+7452109 | Msa0440320:CDS |
| ATCTCTTGAATTGTTTGTTG+AGG | 0.496296 | 3_3:-7451749 | None:intergenic |
| CATGATATGATTCCAACGTT+GGG | 0.499455 | 3_3:-7451931 | None:intergenic |
| GGGAACAAGAAGGAAGGATT+AGG | 0.499937 | 3_3:+7452290 | Msa0440320:CDS |
| TGAAATTTATGATGTGGAAT+GGG | 0.503077 | 3_3:+7452081 | Msa0440320:CDS |
| TCCACATCATAAATTTCACT+TGG | 0.503817 | 3_3:-7452076 | None:intergenic |
| TCCAAGTGAAATTTATGATG+TGG | 0.511674 | 3_3:+7452075 | Msa0440320:CDS |
| GTGAAATTTATGATGTGGAA+TGG | 0.519138 | 3_3:+7452080 | Msa0440320:CDS |
| GCACCAACGGGGTACTTCGA+TGG | 0.521410 | 3_3:+7452121 | Msa0440320:CDS |
| TGTGGAATGGGATGTGATCA+TGG | 0.525871 | 3_3:+7452093 | Msa0440320:CDS |
| CATCATTGAACTACGGTGGC+CGG | 0.528792 | 3_3:+7451855 | Msa0440320:CDS |
| ATTAATGCATTGGCTAATGA+TGG | 0.530150 | 3_3:-7451701 | None:intergenic |
| CTTCTTCCAGGAAAACGGTC+CGG | 0.530964 | 3_3:-7451874 | None:intergenic |
| ACATGATATGATTCCAACGT+TGG | 0.536855 | 3_3:-7451932 | None:intergenic |
| ATTTGAGGGAACAAGAAGGA+AGG | 0.541340 | 3_3:+7452284 | Msa0440320:CDS |
| ACTTCGATGGCGCGCCGGGG+AGG | 0.549464 | 3_3:+7452134 | Msa0440320:CDS |
| GTGTTTGAAGTTGTTGTGGG+TGG | 0.550586 | 3_3:-7451581 | None:intergenic |
| GAAAATTGGAATGGAACAAG+AGG | 0.553174 | 3_3:+7451994 | Msa0440320:CDS |
| TCCTGGAAGAAGACAAGACA+TGG | 0.567326 | 3_3:+7451885 | Msa0440320:CDS |
| GTTGGTGTTATAGGGAGTGA+AGG | 0.571518 | 3_3:-7451662 | None:intergenic |
| TGAACTAATGAAAATTGGAA+TGG | 0.575241 | 3_3:+7451985 | Msa0440320:CDS |
| AATGCATTGGCTAATGATGG+AGG | 0.575854 | 3_3:-7451698 | None:intergenic |
| CCAATCAAAGTTCCCAACGT+TGG | 0.578373 | 3_3:+7451919 | Msa0440320:CDS |
| CTCTTGAATTGTTTGTTGAG+GGG | 0.579049 | 3_3:-7451747 | None:intergenic |
| ATGCATTGGCTAATGATGGA+GGG | 0.579142 | 3_3:-7451697 | None:intergenic |
| CTTCAATATACCAAGTCATA+GGG | 0.581013 | 3_3:+7452315 | Msa0440320:CDS |
| GGTTATTTGAGGGAACAAGA+AGG | 0.586352 | 3_3:+7452280 | Msa0440320:CDS |
| TGATGTTGATAGGAAAGTTG+AGG | 0.590781 | 3_3:+7452228 | Msa0440320:CDS |
| GATCATGGTGGATGCACCAA+CGG | 0.605400 | 3_3:+7452108 | Msa0440320:CDS |
| TTGGTGTTATAGGGAGTGAA+GGG | 0.609114 | 3_3:-7451661 | None:intergenic |
| CCAAAGACCAAGAAGTTGCA+AGG | 0.614426 | 3_3:-7451806 | None:intergenic |
| GCGCCATCGAAGTACCCCGT+TGG | 0.633771 | 3_3:-7452124 | None:intergenic |
| TAAATAGCACTCATCCTCCC+CGG | 0.635229 | 3_3:-7452148 | None:intergenic |
| ATGTGGACATCATTGAACTA+CGG | 0.637354 | 3_3:+7451848 | Msa0440320:CDS |
| TAGGTCATGATAGTCTCATG+TGG | 0.666366 | 3_3:+7451831 | Msa0440320:CDS |
| TGGACATCATTGAACTACGG+TGG | 0.678674 | 3_3:+7451851 | Msa0440320:CDS |
| GGTACTTCGATGGCGCGCCG+GGG | 0.680331 | 3_3:+7452131 | Msa0440320:CDS |
| GGAATGGGATGTGATCATGG+TGG | 0.725748 | 3_3:+7452096 | Msa0440320:CDS |
| TCATGGTGGATGCACCAACG+GGG | 0.763267 | 3_3:+7452110 | Msa0440320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTTTTGAAGAACTT+TGG | - | chr3_3:7451786-7451805 | None:intergenic | 20.0% |
| !!! | TGATTTTTTTTGAAGAACTT+TGG | - | chr3_3:7451786-7451805 | None:intergenic | 20.0% |
| !! | TTTCTTGTGATGAGATTTTT+GGG | - | chr3_3:7451616-7451635 | None:intergenic | 25.0% |
| !!! | TGATTTTTGTTGTTGCATAA+TGG | - | chr3_3:7451727-7451746 | None:intergenic | 25.0% |
| ! | AGTGATGAACTAATGAAAAT+TGG | + | chr3_3:7451980-7451999 | Msa0440320:CDS | 25.0% |
| ! | TGAACTAATGAAAATTGGAA+TGG | + | chr3_3:7451985-7452004 | Msa0440320:CDS | 25.0% |
| !!! | ATCCACATTTTGAAAATCTT+GGG | - | chr3_3:7452039-7452058 | None:intergenic | 25.0% |
| !!! | AATCCACATTTTGAAAATCT+TGG | - | chr3_3:7452040-7452059 | None:intergenic | 25.0% |
| ! | TGAAATTTATGATGTGGAAT+GGG | + | chr3_3:7452081-7452100 | Msa0440320:CDS | 25.0% |
| !! | TTTCTTGTGATGAGATTTTT+GGG | - | chr3_3:7451616-7451635 | None:intergenic | 25.0% |
| !!! | TGATTTTTGTTGTTGCATAA+TGG | - | chr3_3:7451727-7451746 | None:intergenic | 25.0% |
| ! | AGTGATGAACTAATGAAAAT+TGG | + | chr3_3:7451980-7451999 | Msa0440320:CDS | 25.0% |
| ! | TGAACTAATGAAAATTGGAA+TGG | + | chr3_3:7451985-7452004 | Msa0440320:CDS | 25.0% |
| !!! | ATCCACATTTTGAAAATCTT+GGG | - | chr3_3:7452039-7452058 | None:intergenic | 25.0% |
| !!! | AATCCACATTTTGAAAATCT+TGG | - | chr3_3:7452040-7452059 | None:intergenic | 25.0% |
| ! | TGAAATTTATGATGTGGAAT+GGG | + | chr3_3:7452081-7452100 | Msa0440320:CDS | 25.0% |
| TGGTTGAGAAAATGAGAAAA+TGG | - | chr3_3:7451564-7451583 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTGATGAGATTTT+TGG | - | chr3_3:7451617-7451636 | None:intergenic | 30.0% |
| !! | ATTAATGCATTGGCTAATGA+TGG | - | chr3_3:7451704-7451723 | None:intergenic | 30.0% |
| !! | TGCATAATGGATTAATGCAT+TGG | - | chr3_3:7451714-7451733 | None:intergenic | 30.0% |
| ! | TCTCTTGAATTGTTTGTTGA+GGG | - | chr3_3:7451751-7451770 | None:intergenic | 30.0% |
| ! | ATCTCTTGAATTGTTTGTTG+AGG | - | chr3_3:7451752-7451771 | None:intergenic | 30.0% |
| !! | AAATGTGGATTAGCACTTAA+AGG | + | chr3_3:7452049-7452068 | Msa0440320:CDS | 30.0% |
| TCCAAGTGAAATTTATGATG+TGG | + | chr3_3:7452075-7452094 | Msa0440320:CDS | 30.0% | |
| TCCACATCATAAATTTCACT+TGG | - | chr3_3:7452079-7452098 | None:intergenic | 30.0% | |
| GTGAAATTTATGATGTGGAA+TGG | + | chr3_3:7452080-7452099 | Msa0440320:CDS | 30.0% | |
| ATTGCTAGGAATAGAGAAAA+TGG | + | chr3_3:7452184-7452203 | Msa0440320:CDS | 30.0% | |
| TGTTTGTTCATGATGTTGAT+AGG | + | chr3_3:7452218-7452237 | Msa0440320:CDS | 30.0% | |
| ! | AGTTGAGGATCAATTTTCAA+AGG | + | chr3_3:7452243-7452262 | Msa0440320:CDS | 30.0% |
| TTCTTTGTGAAGGTTATTTG+AGG | + | chr3_3:7452269-7452288 | Msa0440320:CDS | 30.0% | |
| TCTTTGTGAAGGTTATTTGA+GGG | + | chr3_3:7452270-7452289 | Msa0440320:CDS | 30.0% | |
| ACTTCAATATACCAAGTCAT+AGG | + | chr3_3:7452314-7452333 | Msa0440320:CDS | 30.0% | |
| CTTCAATATACCAAGTCATA+GGG | + | chr3_3:7452315-7452334 | Msa0440320:CDS | 30.0% | |
| TGGTTGAGAAAATGAGAAAA+TGG | - | chr3_3:7451564-7451583 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTGATGAGATTTT+TGG | - | chr3_3:7451617-7451636 | None:intergenic | 30.0% |
| !! | ATTAATGCATTGGCTAATGA+TGG | - | chr3_3:7451704-7451723 | None:intergenic | 30.0% |
| !! | TGCATAATGGATTAATGCAT+TGG | - | chr3_3:7451714-7451733 | None:intergenic | 30.0% |
| ! | TCTCTTGAATTGTTTGTTGA+GGG | - | chr3_3:7451751-7451770 | None:intergenic | 30.0% |
| ! | ATCTCTTGAATTGTTTGTTG+AGG | - | chr3_3:7451752-7451771 | None:intergenic | 30.0% |
| !! | AAATGTGGATTAGCACTTAA+AGG | + | chr3_3:7452049-7452068 | Msa0440320:CDS | 30.0% |
| TCCAAGTGAAATTTATGATG+TGG | + | chr3_3:7452075-7452094 | Msa0440320:CDS | 30.0% | |
| TCCACATCATAAATTTCACT+TGG | - | chr3_3:7452079-7452098 | None:intergenic | 30.0% | |
| GTGAAATTTATGATGTGGAA+TGG | + | chr3_3:7452080-7452099 | Msa0440320:CDS | 30.0% | |
| ATTGCTAGGAATAGAGAAAA+TGG | + | chr3_3:7452184-7452203 | Msa0440320:CDS | 30.0% | |
| TGTTTGTTCATGATGTTGAT+AGG | + | chr3_3:7452218-7452237 | Msa0440320:CDS | 30.0% | |
| ! | AGTTGAGGATCAATTTTCAA+AGG | + | chr3_3:7452243-7452262 | Msa0440320:CDS | 30.0% |
| TTCTTTGTGAAGGTTATTTG+AGG | + | chr3_3:7452269-7452288 | Msa0440320:CDS | 30.0% | |
| TCTTTGTGAAGGTTATTTGA+GGG | + | chr3_3:7452270-7452289 | Msa0440320:CDS | 30.0% | |
| ACTTCAATATACCAAGTCAT+AGG | + | chr3_3:7452314-7452333 | Msa0440320:CDS | 30.0% | |
| CTTCAATATACCAAGTCATA+GGG | + | chr3_3:7452315-7452334 | Msa0440320:CDS | 30.0% | |
| ! | ATTGGATGAGAGTTGTGTTT+TGG | - | chr3_3:7451480-7451499 | None:intergenic | 35.0% |
| !! | GATGATGACTAGTTTGAGAT+TGG | - | chr3_3:7451498-7451517 | None:intergenic | 35.0% |
| ! | TTGGTGTTTGAAGTTGTTGT+GGG | - | chr3_3:7451587-7451606 | None:intergenic | 35.0% |
| !!! | TGAGATTTTTGGGTCATTGT+TGG | - | chr3_3:7451606-7451625 | None:intergenic | 35.0% |
| !! | TTGTGCATGTTGGTGTTATA+GGG | - | chr3_3:7451673-7451692 | None:intergenic | 35.0% |
| !! | TTTGTGCATGTTGGTGTTAT+AGG | - | chr3_3:7451674-7451693 | None:intergenic | 35.0% |
| ! | CTCTTGAATTGTTTGTTGAG+GGG | - | chr3_3:7451750-7451769 | None:intergenic | 35.0% |
| AAAATCACCTTGCAACTTCT+TGG | + | chr3_3:7451799-7451818 | Msa0440320:CDS | 35.0% | |
| ! | AACTTCTTGGTCTTTGGATT+AGG | + | chr3_3:7451812-7451831 | Msa0440320:CDS | 35.0% |
| ATGTGGACATCATTGAACTA+CGG | + | chr3_3:7451848-7451867 | Msa0440320:CDS | 35.0% | |
| CATGATATGATTCCAACGTT+GGG | - | chr3_3:7451934-7451953 | None:intergenic | 35.0% | |
| ACATGATATGATTCCAACGT+TGG | - | chr3_3:7451935-7451954 | None:intergenic | 35.0% | |
| GAAAATTGGAATGGAACAAG+AGG | + | chr3_3:7451994-7452013 | Msa0440320:CDS | 35.0% | |
| ! | GACCCAAGATTTTCAAAATG+TGG | + | chr3_3:7452034-7452053 | Msa0440320:CDS | 35.0% |
| !! | ATGAGTGCTATTTATACAGC+TGG | + | chr3_3:7452157-7452176 | Msa0440320:CDS | 35.0% |
| ! | TGATGTTGATAGGAAAGTTG+AGG | + | chr3_3:7452228-7452247 | Msa0440320:CDS | 35.0% |
| ! | TCAAAGGCTTTTCTTTGTGA+AGG | + | chr3_3:7452259-7452278 | Msa0440320:CDS | 35.0% |
| ! | ATTGGATGAGAGTTGTGTTT+TGG | - | chr3_3:7451480-7451499 | None:intergenic | 35.0% |
| !! | GATGATGACTAGTTTGAGAT+TGG | - | chr3_3:7451498-7451517 | None:intergenic | 35.0% |
| ! | TTGGTGTTTGAAGTTGTTGT+GGG | - | chr3_3:7451587-7451606 | None:intergenic | 35.0% |
| !!! | TGAGATTTTTGGGTCATTGT+TGG | - | chr3_3:7451606-7451625 | None:intergenic | 35.0% |
| !! | TTGTGCATGTTGGTGTTATA+GGG | - | chr3_3:7451673-7451692 | None:intergenic | 35.0% |
| !! | TTTGTGCATGTTGGTGTTAT+AGG | - | chr3_3:7451674-7451693 | None:intergenic | 35.0% |
| ! | CTCTTGAATTGTTTGTTGAG+GGG | - | chr3_3:7451750-7451769 | None:intergenic | 35.0% |
| AAAATCACCTTGCAACTTCT+TGG | + | chr3_3:7451799-7451818 | Msa0440320:CDS | 35.0% | |
| ! | AACTTCTTGGTCTTTGGATT+AGG | + | chr3_3:7451812-7451831 | Msa0440320:CDS | 35.0% |
| ATGTGGACATCATTGAACTA+CGG | + | chr3_3:7451848-7451867 | Msa0440320:CDS | 35.0% | |
| CATGATATGATTCCAACGTT+GGG | - | chr3_3:7451934-7451953 | None:intergenic | 35.0% | |
| ACATGATATGATTCCAACGT+TGG | - | chr3_3:7451935-7451954 | None:intergenic | 35.0% | |
| GAAAATTGGAATGGAACAAG+AGG | + | chr3_3:7451994-7452013 | Msa0440320:CDS | 35.0% | |
| ! | GACCCAAGATTTTCAAAATG+TGG | + | chr3_3:7452034-7452053 | Msa0440320:CDS | 35.0% |
| !! | ATGAGTGCTATTTATACAGC+TGG | + | chr3_3:7452157-7452176 | Msa0440320:CDS | 35.0% |
| ! | TGATGTTGATAGGAAAGTTG+AGG | + | chr3_3:7452228-7452247 | Msa0440320:CDS | 35.0% |
| ! | TCAAAGGCTTTTCTTTGTGA+AGG | + | chr3_3:7452259-7452278 | Msa0440320:CDS | 35.0% |
| ! | GTTGGTGTTTGAAGTTGTTG+TGG | - | chr3_3:7451588-7451607 | None:intergenic | 40.0% |
| !! | TTGGTGTTATAGGGAGTGAA+GGG | - | chr3_3:7451664-7451683 | None:intergenic | 40.0% |
| !! | ATGCATTGGCTAATGATGGA+GGG | - | chr3_3:7451700-7451719 | None:intergenic | 40.0% |
| !! | AATGCATTGGCTAATGATGG+AGG | - | chr3_3:7451701-7451720 | None:intergenic | 40.0% |
| TAGGTCATGATAGTCTCATG+TGG | + | chr3_3:7451831-7451850 | Msa0440320:CDS | 40.0% | |
| CTTGTCTTCTTCCAGGAAAA+CGG | - | chr3_3:7451882-7451901 | None:intergenic | 40.0% | |
| !! | ATACAGCTGGTTTGATTGCT+AGG | + | chr3_3:7452170-7452189 | Msa0440320:CDS | 40.0% |
| GGTTATTTGAGGGAACAAGA+AGG | + | chr3_3:7452280-7452299 | Msa0440320:CDS | 40.0% | |
| ATTTGAGGGAACAAGAAGGA+AGG | + | chr3_3:7452284-7452303 | Msa0440320:CDS | 40.0% | |
| ! | GTTGGTGTTTGAAGTTGTTG+TGG | - | chr3_3:7451588-7451607 | None:intergenic | 40.0% |
| !! | TTGGTGTTATAGGGAGTGAA+GGG | - | chr3_3:7451664-7451683 | None:intergenic | 40.0% |
| !! | ATGCATTGGCTAATGATGGA+GGG | - | chr3_3:7451700-7451719 | None:intergenic | 40.0% |
| !! | AATGCATTGGCTAATGATGG+AGG | - | chr3_3:7451701-7451720 | None:intergenic | 40.0% |
| TAGGTCATGATAGTCTCATG+TGG | + | chr3_3:7451831-7451850 | Msa0440320:CDS | 40.0% | |
| CTTGTCTTCTTCCAGGAAAA+CGG | - | chr3_3:7451882-7451901 | None:intergenic | 40.0% | |
| !! | ATACAGCTGGTTTGATTGCT+AGG | + | chr3_3:7452170-7452189 | Msa0440320:CDS | 40.0% |
| GGTTATTTGAGGGAACAAGA+AGG | + | chr3_3:7452280-7452299 | Msa0440320:CDS | 40.0% | |
| ATTTGAGGGAACAAGAAGGA+AGG | + | chr3_3:7452284-7452303 | Msa0440320:CDS | 40.0% | |
| ! | GTGTTTGAAGTTGTTGTGGG+TGG | - | chr3_3:7451584-7451603 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATAGGGAGTGA+AGG | - | chr3_3:7451665-7451684 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTTTGTGCATGT+TGG | - | chr3_3:7451683-7451702 | None:intergenic | 45.0% |
| CCAAAGACCAAGAAGTTGCA+AGG | - | chr3_3:7451809-7451828 | None:intergenic | 45.0% | |
| ! | CCTTGCAACTTCTTGGTCTT+TGG | + | chr3_3:7451806-7451825 | Msa0440320:CDS | 45.0% |
| TGGACATCATTGAACTACGG+TGG | + | chr3_3:7451851-7451870 | Msa0440320:CDS | 45.0% | |
| TCCTGGAAGAAGACAAGACA+TGG | + | chr3_3:7451885-7451904 | Msa0440320:CDS | 45.0% | |
| TCCATGTCTTGTCTTCTTCC+AGG | - | chr3_3:7451889-7451908 | None:intergenic | 45.0% | |
| CCAACGTTGGGAACTTTGAT+TGG | - | chr3_3:7451922-7451941 | None:intergenic | 45.0% | |
| CCAATCAAAGTTCCCAACGT+TGG | + | chr3_3:7451919-7451938 | Msa0440320:CDS | 45.0% | |
| TGTGGAATGGGATGTGATCA+TGG | + | chr3_3:7452093-7452112 | Msa0440320:CDS | 45.0% | |
| TAAATAGCACTCATCCTCCC+CGG | - | chr3_3:7452151-7452170 | None:intergenic | 45.0% | |
| GGGAACAAGAAGGAAGGATT+AGG | + | chr3_3:7452290-7452309 | Msa0440320:CDS | 45.0% | |
| ! | GTGTTTGAAGTTGTTGTGGG+TGG | - | chr3_3:7451584-7451603 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATAGGGAGTGA+AGG | - | chr3_3:7451665-7451684 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTTTGTGCATGT+TGG | - | chr3_3:7451683-7451702 | None:intergenic | 45.0% |
| CCAAAGACCAAGAAGTTGCA+AGG | - | chr3_3:7451809-7451828 | None:intergenic | 45.0% | |
| ! | CCTTGCAACTTCTTGGTCTT+TGG | + | chr3_3:7451806-7451825 | Msa0440320:CDS | 45.0% |
| TGGACATCATTGAACTACGG+TGG | + | chr3_3:7451851-7451870 | Msa0440320:CDS | 45.0% | |
| TCCTGGAAGAAGACAAGACA+TGG | + | chr3_3:7451885-7451904 | Msa0440320:CDS | 45.0% | |
| TCCATGTCTTGTCTTCTTCC+AGG | - | chr3_3:7451889-7451908 | None:intergenic | 45.0% | |
| CCAACGTTGGGAACTTTGAT+TGG | - | chr3_3:7451922-7451941 | None:intergenic | 45.0% | |
| CCAATCAAAGTTCCCAACGT+TGG | + | chr3_3:7451919-7451938 | Msa0440320:CDS | 45.0% | |
| TGTGGAATGGGATGTGATCA+TGG | + | chr3_3:7452093-7452112 | Msa0440320:CDS | 45.0% | |
| TAAATAGCACTCATCCTCCC+CGG | - | chr3_3:7452151-7452170 | None:intergenic | 45.0% | |
| GGGAACAAGAAGGAAGGATT+AGG | + | chr3_3:7452290-7452309 | Msa0440320:CDS | 45.0% | |
| CATCATTGAACTACGGTGGC+CGG | + | chr3_3:7451855-7451874 | Msa0440320:CDS | 50.0% | |
| CTTCTTCCAGGAAAACGGTC+CGG | - | chr3_3:7451877-7451896 | None:intergenic | 50.0% | |
| GGAATGGGATGTGATCATGG+TGG | + | chr3_3:7452096-7452115 | Msa0440320:CDS | 50.0% | |
| !! | GATCATGGTGGATGCACCAA+CGG | + | chr3_3:7452108-7452127 | Msa0440320:CDS | 50.0% |
| !! | ATCATGGTGGATGCACCAAC+GGG | + | chr3_3:7452109-7452128 | Msa0440320:CDS | 50.0% |
| ACCAAGTCATAGGGCACGTT+TGG | + | chr3_3:7452324-7452343 | Msa0440320:CDS | 50.0% | |
| CCAAGTCATAGGGCACGTTT+GGG | + | chr3_3:7452325-7452344 | Msa0440320:CDS | 50.0% | |
| CATCATTGAACTACGGTGGC+CGG | + | chr3_3:7451855-7451874 | Msa0440320:CDS | 50.0% | |
| CTTCTTCCAGGAAAACGGTC+CGG | - | chr3_3:7451877-7451896 | None:intergenic | 50.0% | |
| GGAATGGGATGTGATCATGG+TGG | + | chr3_3:7452096-7452115 | Msa0440320:CDS | 50.0% | |
| !! | GATCATGGTGGATGCACCAA+CGG | + | chr3_3:7452108-7452127 | Msa0440320:CDS | 50.0% |
| !! | ATCATGGTGGATGCACCAAC+GGG | + | chr3_3:7452109-7452128 | Msa0440320:CDS | 50.0% |
| ACCAAGTCATAGGGCACGTT+TGG | + | chr3_3:7452324-7452343 | Msa0440320:CDS | 50.0% | |
| CCAAGTCATAGGGCACGTTT+GGG | + | chr3_3:7452325-7452344 | Msa0440320:CDS | 50.0% | |
| !! | TCATGGTGGATGCACCAACG+GGG | + | chr3_3:7452110-7452129 | Msa0440320:CDS | 55.0% |
| CCCAAACGTGCCCTATGACT+TGG | - | chr3_3:7452328-7452347 | None:intergenic | 55.0% | |
| !! | TCATGGTGGATGCACCAACG+GGG | + | chr3_3:7452110-7452129 | Msa0440320:CDS | 55.0% |
| CCCAAACGTGCCCTATGACT+TGG | - | chr3_3:7452328-7452347 | None:intergenic | 55.0% | |
| ! | GCACCAACGGGGTACTTCGA+TGG | + | chr3_3:7452121-7452140 | Msa0440320:CDS | 60.0% |
| ! | GCACCAACGGGGTACTTCGA+TGG | + | chr3_3:7452121-7452140 | Msa0440320:CDS | 60.0% |
| ! | GCGCCATCGAAGTACCCCGT+TGG | - | chr3_3:7452127-7452146 | None:intergenic | 65.0% |
| ! | GCGCCATCGAAGTACCCCGT+TGG | - | chr3_3:7452127-7452146 | None:intergenic | 65.0% |
| ! | CGGTGGCCGGACCGTTTTCC+TGG | + | chr3_3:7451868-7451887 | Msa0440320:CDS | 70.0% |
| ! | GGGGTACTTCGATGGCGCGC+CGG | + | chr3_3:7452129-7452148 | Msa0440320:CDS | 70.0% |
| GGGTACTTCGATGGCGCGCC+GGG | + | chr3_3:7452130-7452149 | Msa0440320:CDS | 70.0% | |
| GGTACTTCGATGGCGCGCCG+GGG | + | chr3_3:7452131-7452150 | Msa0440320:CDS | 70.0% | |
| ! | CGGTGGCCGGACCGTTTTCC+TGG | + | chr3_3:7451868-7451887 | Msa0440320:CDS | 70.0% |
| ! | GGGGTACTTCGATGGCGCGC+CGG | + | chr3_3:7452129-7452148 | Msa0440320:CDS | 70.0% |
| GGGTACTTCGATGGCGCGCC+GGG | + | chr3_3:7452130-7452149 | Msa0440320:CDS | 70.0% | |
| GGTACTTCGATGGCGCGCCG+GGG | + | chr3_3:7452131-7452150 | Msa0440320:CDS | 70.0% | |
| ACTTCGATGGCGCGCCGGGG+AGG | + | chr3_3:7452134-7452153 | Msa0440320:CDS | 75.0% | |
| ACTTCGATGGCGCGCCGGGG+AGG | + | chr3_3:7452134-7452153 | Msa0440320:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 7451470 | 7452366 | 7451470 | ID=Msa0440320;Name=Msa0440320 |
| chr3_3 | mRNA | 7451470 | 7452366 | 7451470 | ID=Msa0440320-mRNA-1;Parent=Msa0440320;Name=Msa0440320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|298 |
| chr3_3 | exon | 7451470 | 7452366 | 7451470 | ID=Msa0440320-mRNA-1:exon:1499;Parent=Msa0440320-mRNA-1 |
| chr3_3 | CDS | 7451470 | 7452366 | 7451470 | ID=Msa0440320-mRNA-1:cds;Parent=Msa0440320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
