Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385720 | XP_003625518.1 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385720 | sp|Q851S7|PESC_ORYSJ | 59.477 | 612 | 235 | 6 | 1 | 608 | 1 | 603 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385720 | G7L0M1 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1385720 | 0.841834 | 3.737055e-58 | -8.615850e-47 |
| Msa0016540 | Msa1385720 | 0.814759 | 1.308052e-51 | -8.615850e-47 |
| Msa0024930 | Msa1385720 | 0.804500 | 2.097286e-49 | -8.615850e-47 |
| Msa0028930 | Msa1385720 | 0.812558 | 3.991974e-51 | -8.615850e-47 |
| Msa0030200 | Msa1385720 | 0.808770 | 2.630014e-50 | -8.615850e-47 |
| Msa0032810 | Msa1385720 | 0.818262 | 2.148983e-52 | -8.615850e-47 |
| Msa0037770 | Msa1385720 | 0.848651 | 5.351768e-60 | -8.615850e-47 |
| Msa0046110 | Msa1385720 | -0.806852 | 6.725571e-50 | -8.615850e-47 |
| Msa0047160 | Msa1385720 | 0.826832 | 2.184812e-54 | -8.615850e-47 |
| Msa0059040 | Msa1385720 | 0.813840 | 2.088192e-51 | -8.615850e-47 |
| Msa0059110 | Msa1385720 | 0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0067590 | Msa1385720 | -0.800960 | 1.127551e-48 | -8.615850e-47 |
| Msa0072420 | Msa1385720 | 0.801758 | 7.742383e-49 | -8.615850e-47 |
| Msa0090520 | Msa1385720 | 0.800948 | 1.134385e-48 | -8.615850e-47 |
| Msa0091560 | Msa1385720 | 0.807065 | 6.063219e-50 | -8.615850e-47 |
| Msa0094470 | Msa1385720 | 0.814213 | 1.727858e-51 | -8.615850e-47 |
| Msa0100290 | Msa1385720 | 0.801280 | 9.698457e-49 | -8.615850e-47 |
| Msa0104670 | Msa1385720 | 0.803809 | 2.919617e-49 | -8.615850e-47 |
| Msa0105370 | Msa1385720 | 0.827416 | 1.583901e-54 | -8.615850e-47 |
| Msa0106620 | Msa1385720 | 0.809675 | 1.683193e-50 | -8.615850e-47 |
| Msa0106710 | Msa1385720 | 0.810803 | 9.611335e-51 | -8.615850e-47 |
| Msa0115130 | Msa1385720 | 0.815617 | 8.432862e-52 | -8.615850e-47 |
| Msa0115400 | Msa1385720 | 0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0118590 | Msa1385720 | 0.803112 | 4.072284e-49 | -8.615850e-47 |
| Msa1349520 | Msa1385720 | 0.818414 | 1.984819e-52 | -8.615850e-47 |
| Msa1351540 | Msa1385720 | 0.868670 | 5.492929e-66 | -8.615850e-47 |
| Msa1359400 | Msa1385720 | 0.810233 | 1.276457e-50 | -8.615850e-47 |
| Msa1364210 | Msa1385720 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa1366390 | Msa1385720 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa1368360 | Msa1385720 | 0.802952 | 4.393800e-49 | -8.615850e-47 |
| Msa1370450 | Msa1385720 | 0.841995 | 3.387945e-58 | -8.615850e-47 |
| Msa1381350 | Msa1385720 | 0.827238 | 1.747224e-54 | -8.615850e-47 |
| Msa1383960 | Msa1385720 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa1385720 | Msa1394290 | 0.808012 | 3.817291e-50 | -8.615850e-47 |
| Msa1385720 | Msa1406070 | 0.838136 | 3.440360e-57 | -8.615850e-47 |
| Msa1385720 | Msa1411970 | 0.858651 | 7.116032e-63 | -8.615850e-47 |
| Msa1385720 | Msa1413380 | 0.826282 | 2.955321e-54 | -8.615850e-47 |
| Msa1385720 | Msa1434090 | 0.991931 | 2.429890e-190 | -8.615850e-47 |
| Msa1385720 | Msa1435390 | 0.828360 | 9.388533e-55 | -8.615850e-47 |
| Msa1385720 | Msa1437270 | 0.813107 | 3.026390e-51 | -8.615850e-47 |
| Msa1385720 | Msa1440310 | 0.817281 | 3.578074e-52 | -8.615850e-47 |
| Msa1385720 | Msa1440930 | 0.826990 | 2.003215e-54 | -8.615850e-47 |
| Msa1385720 | Msa1450720 | 0.810158 | 1.324465e-50 | -8.615850e-47 |
| Msa1385720 | Msa1454680 | 0.822466 | 2.333971e-53 | -8.615850e-47 |
| Msa1385720 | Msa1464090 | 0.837008 | 6.695196e-57 | -8.615850e-47 |
| Msa0615580 | Msa1385720 | 0.830433 | 2.944974e-55 | -8.615850e-47 |
| Msa0617170 | Msa1385720 | 0.823584 | 1.280164e-53 | -8.615850e-47 |
| Msa0626630 | Msa1385720 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa0627380 | Msa1385720 | 0.816565 | 5.179111e-52 | -8.615850e-47 |
| Msa0628410 | Msa1385720 | 0.813384 | 2.630819e-51 | -8.615850e-47 |
| Msa0630770 | Msa1385720 | -0.806989 | 6.290689e-50 | -8.615850e-47 |
| Msa0634890 | Msa1385720 | 0.804474 | 2.122802e-49 | -8.615850e-47 |
| Msa0645620 | Msa1385720 | 0.807011 | 6.225416e-50 | -8.615850e-47 |
| Msa0648780 | Msa1385720 | 0.858331 | 8.867402e-63 | -8.615850e-47 |
| Msa0660040 | Msa1385720 | 0.801493 | 8.773459e-49 | -8.615850e-47 |
| Msa0664560 | Msa1385720 | 0.831024 | 2.110387e-55 | -8.615850e-47 |
| Msa0664750 | Msa1385720 | 0.851451 | 8.801019e-61 | -8.615850e-47 |
| Msa0665100 | Msa1385720 | 0.818912 | 1.529784e-52 | -8.615850e-47 |
| Msa0672550 | Msa1385720 | 0.852320 | 4.988178e-61 | -8.615850e-47 |
| Msa0687440 | Msa1385720 | 0.809119 | 2.214684e-50 | -8.615850e-47 |
| Msa0689440 | Msa1385720 | 0.852693 | 3.905459e-61 | -8.615850e-47 |
| Msa0691290 | Msa1385720 | 0.801759 | 7.737941e-49 | -8.615850e-47 |
| Msa0697680 | Msa1385720 | 0.836729 | 7.889141e-57 | -8.615850e-47 |
| Msa0712560 | Msa1385720 | 0.808204 | 3.474792e-50 | -8.615850e-47 |
| Msa0719610 | Msa1385720 | 0.814234 | 1.708816e-51 | -8.615850e-47 |
| Msa0746960 | Msa1385720 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0763330 | Msa1385720 | 0.819743 | 9.894689e-53 | -8.615850e-47 |
| Msa0791090 | Msa1385720 | 0.804052 | 2.598754e-49 | -8.615850e-47 |
| Msa0800370 | Msa1385720 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0822500 | Msa1385720 | 0.809259 | 2.067053e-50 | -8.615850e-47 |
| Msa0831100 | Msa1385720 | 0.807563 | 4.756220e-50 | -8.615850e-47 |
| Msa0120880 | Msa1385720 | 0.901808 | 1.841744e-78 | -8.615850e-47 |
| Msa0124450 | Msa1385720 | 0.839437 | 1.585606e-57 | -8.615850e-47 |
| Msa0127100 | Msa1385720 | 0.814230 | 1.712541e-51 | -8.615850e-47 |
| Msa0129340 | Msa1385720 | 0.813809 | 2.120460e-51 | -8.615850e-47 |
| Msa0137990 | Msa1385720 | 0.801118 | 1.047144e-48 | -8.615850e-47 |
| Msa0140770 | Msa1385720 | -0.845424 | 4.095903e-59 | -8.615850e-47 |
| Msa0149440 | Msa1385720 | 0.854212 | 1.431005e-61 | -8.615850e-47 |
| Msa0156760 | Msa1385720 | 0.823642 | 1.241193e-53 | -8.615850e-47 |
| Msa0179190 | Msa1385720 | 0.813046 | 3.120213e-51 | -8.615850e-47 |
| Msa0188350 | Msa1385720 | 0.800291 | 1.543817e-48 | -8.615850e-47 |
| Msa0189300 | Msa1385720 | 0.803180 | 3.942814e-49 | -8.615850e-47 |
| Msa0190350 | Msa1385720 | 0.837266 | 5.754089e-57 | -8.615850e-47 |
| Msa0202110 | Msa1385720 | 0.804386 | 2.214974e-49 | -8.615850e-47 |
| Msa0202410 | Msa1385720 | 0.850834 | 1.314298e-60 | -8.615850e-47 |
| Msa0204960 | Msa1385720 | 0.847509 | 1.105795e-59 | -8.615850e-47 |
| Msa0209140 | Msa1385720 | 0.807593 | 4.685136e-50 | -8.615850e-47 |
| Msa0220990 | Msa1385720 | 0.814462 | 1.521730e-51 | -8.615850e-47 |
| Msa0223330 | Msa1385720 | 0.808622 | 2.829613e-50 | -8.615850e-47 |
| Msa0230520 | Msa1385720 | 0.805429 | 1.340925e-49 | -8.615850e-47 |
| Msa0231100 | Msa1385720 | 0.800336 | 1.511978e-48 | -8.615850e-47 |
| Msa0231190 | Msa1385720 | 0.805163 | 1.524031e-49 | -8.615850e-47 |
| Msa0232360 | Msa1385720 | 0.809609 | 1.738630e-50 | -8.615850e-47 |
| Msa0233370 | Msa1385720 | 0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0237210 | Msa1385720 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa1225860 | Msa1385720 | -0.831457 | 1.651419e-55 | -8.615850e-47 |
| Msa1235610 | Msa1385720 | 0.818092 | 2.348010e-52 | -8.615850e-47 |
| Msa1236110 | Msa1385720 | -0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa1262890 | Msa1385720 | 0.811119 | 8.209562e-51 | -8.615850e-47 |
| Msa1264210 | Msa1385720 | 0.838777 | 2.350802e-57 | -8.615850e-47 |
| Msa1265590 | Msa1385720 | 0.832711 | 8.086670e-56 | -8.615850e-47 |
| Msa1265630 | Msa1385720 | 0.832243 | 1.056557e-55 | -8.615850e-47 |
| Msa1266190 | Msa1385720 | 0.830567 | 2.731630e-55 | -8.615850e-47 |
| Msa1275680 | Msa1385720 | 0.882073 | 1.413674e-70 | -8.615850e-47 |
| Msa1277260 | Msa1385720 | 0.842098 | 3.181449e-58 | -8.615850e-47 |
| Msa1298690 | Msa1385720 | 0.811841 | 5.721548e-51 | -8.615850e-47 |
| Msa1302380 | Msa1385720 | 0.851838 | 6.835777e-61 | -8.615850e-47 |
| Msa1303070 | Msa1385720 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa1307180 | Msa1385720 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
| Msa1315890 | Msa1385720 | 0.851814 | 6.947043e-61 | -8.615850e-47 |
| Msa1316360 | Msa1385720 | 0.819985 | 8.712618e-53 | -8.615850e-47 |
| Msa1329730 | Msa1385720 | 0.845155 | 4.844713e-59 | -8.615850e-47 |
| Msa1329750 | Msa1385720 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
| Msa1330540 | Msa1385720 | -0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa1330560 | Msa1385720 | 0.828788 | 7.400596e-55 | -8.615850e-47 |
| Msa1332590 | Msa1385720 | 0.867667 | 1.156016e-65 | -8.615850e-47 |
| Msa1340200 | Msa1385720 | 0.850042 | 2.192087e-60 | -8.615850e-47 |
| Msa0385500 | Msa1385720 | 0.805793 | 1.124448e-49 | -8.615850e-47 |
| Msa0385830 | Msa1385720 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0403500 | Msa1385720 | 0.854755 | 9.961888e-62 | -8.615850e-47 |
| Msa0419720 | Msa1385720 | 0.809801 | 1.580871e-50 | -8.615850e-47 |
| Msa0426580 | Msa1385720 | 0.802675 | 5.014047e-49 | -8.615850e-47 |
| Msa0430060 | Msa1385720 | 0.813448 | 2.546678e-51 | -8.615850e-47 |
| Msa0430150 | Msa1385720 | 0.816919 | 4.314083e-52 | -8.615850e-47 |
| Msa0437020 | Msa1385720 | 0.982460 | 3.790309e-155 | -8.615850e-47 |
| Msa0450400 | Msa1385720 | -0.841395 | 4.876282e-58 | -8.615850e-47 |
| Msa0450480 | Msa1385720 | 0.830585 | 2.702701e-55 | -8.615850e-47 |
| Msa0479760 | Msa1385720 | -0.839793 | 1.280881e-57 | -8.615850e-47 |
| Msa0481030 | Msa1385720 | 0.814238 | 1.705972e-51 | -8.615850e-47 |
| Msa0481970 | Msa1385720 | 0.814478 | 1.509524e-51 | -8.615850e-47 |
| Msa1006840 | Msa1385720 | 0.814760 | 1.307211e-51 | -8.615850e-47 |
| Msa1012740 | Msa1385720 | 0.843516 | 1.335350e-58 | -8.615850e-47 |
| Msa1021520 | Msa1385720 | 0.838996 | 2.063062e-57 | -8.615850e-47 |
| Msa1027300 | Msa1385720 | 0.801301 | 9.607035e-49 | -8.615850e-47 |
| Msa1044480 | Msa1385720 | 0.835385 | 1.730356e-56 | -8.615850e-47 |
| Msa1060260 | Msa1385720 | 0.837005 | 6.708264e-57 | -8.615850e-47 |
| Msa1072710 | Msa1385720 | 0.812445 | 4.223652e-51 | -8.615850e-47 |
| Msa1089320 | Msa1385720 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa1089450 | Msa1385720 | 0.825540 | 4.433797e-54 | -8.615850e-47 |
| Msa1105510 | Msa1385720 | 0.843703 | 1.190584e-58 | -8.615850e-47 |
| Msa0240900 | Msa1385720 | 0.819481 | 1.135601e-52 | -8.615850e-47 |
| Msa0241830 | Msa1385720 | 0.819783 | 9.687745e-53 | -8.615850e-47 |
| Msa0244970 | Msa1385720 | 0.808139 | 3.586015e-50 | -8.615850e-47 |
| Msa0244980 | Msa1385720 | 0.819137 | 1.360066e-52 | -8.615850e-47 |
| Msa0245430 | Msa1385720 | 0.819412 | 1.177663e-52 | -8.615850e-47 |
| Msa0249310 | Msa1385720 | 0.834062 | 3.725049e-56 | -8.615850e-47 |
| Msa0249580 | Msa1385720 | 0.819028 | 1.439749e-52 | -8.615850e-47 |
| Msa0257490 | Msa1385720 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0258390 | Msa1385720 | 0.859737 | 3.363002e-63 | -8.615850e-47 |
| Msa0261170 | Msa1385720 | 0.824017 | 1.013426e-53 | -8.615850e-47 |
| Msa0270210 | Msa1385720 | 0.810128 | 1.344482e-50 | -8.615850e-47 |
| Msa0272010 | Msa1385720 | 0.812167 | 4.857973e-51 | -8.615850e-47 |
| Msa0275360 | Msa1385720 | 0.814760 | 1.307523e-51 | -8.615850e-47 |
| Msa0281530 | Msa1385720 | 0.848311 | 6.645408e-60 | -8.615850e-47 |
| Msa0283420 | Msa1385720 | 0.830976 | 2.168247e-55 | -8.615850e-47 |
| Msa0287790 | Msa1385720 | 0.810181 | 1.309646e-50 | -8.615850e-47 |
| Msa0295460 | Msa1385720 | -0.839162 | 1.868267e-57 | -8.615850e-47 |
| Msa0296050 | Msa1385720 | -0.803100 | 4.094927e-49 | -8.615850e-47 |
| Msa0296250 | Msa1385720 | 0.824777 | 6.716818e-54 | -8.615850e-47 |
| Msa0296790 | Msa1385720 | 0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0297610 | Msa1385720 | 0.860484 | 2.000805e-63 | -8.615850e-47 |
| Msa0300280 | Msa1385720 | 0.810736 | 9.936020e-51 | -8.615850e-47 |
| Msa0315690 | Msa1385720 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0317970 | Msa1385720 | 0.822089 | 2.854251e-53 | -8.615850e-47 |
| Msa0320590 | Msa1385720 | 0.811851 | 5.693093e-51 | -8.615850e-47 |
| Msa0321690 | Msa1385720 | 0.828145 | 1.058083e-54 | -8.615850e-47 |
| Msa0322240 | Msa1385720 | 0.841186 | 5.534626e-58 | -8.615850e-47 |
| Msa0322900 | Msa1385720 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa0326480 | Msa1385720 | 0.820932 | 5.282336e-53 | -8.615850e-47 |
| Msa0335730 | Msa1385720 | 0.819373 | 1.201882e-52 | -8.615850e-47 |
| Msa0337710 | Msa1385720 | 0.807153 | 5.808997e-50 | -8.615850e-47 |
| Msa0341840 | Msa1385720 | 0.805317 | 1.415197e-49 | -8.615850e-47 |
| Msa0343500 | Msa1385720 | 0.834658 | 2.638248e-56 | -8.615850e-47 |
| Msa0357900 | Msa1385720 | 0.853679 | 2.037694e-61 | -8.615850e-47 |
| Msa1123770 | Msa1385720 | 0.999525 | 2.360102e-319 | -8.615850e-47 |
| Msa1126830 | Msa1385720 | 0.804926 | 1.708132e-49 | -8.615850e-47 |
| Msa1127590 | Msa1385720 | 0.814175 | 1.761482e-51 | -8.615850e-47 |
| Msa1128270 | Msa1385720 | 0.833908 | 4.070014e-56 | -8.615850e-47 |
| Msa1128280 | Msa1385720 | 0.815778 | 7.765496e-52 | -8.615850e-47 |
| Msa1128600 | Msa1385720 | 0.805448 | 1.328511e-49 | -8.615850e-47 |
| Msa1135890 | Msa1385720 | 0.830739 | 2.478385e-55 | -8.615850e-47 |
| Msa1143370 | Msa1385720 | -0.815268 | 1.008584e-51 | -8.615850e-47 |
| Msa1165270 | Msa1385720 | 0.818453 | 1.944795e-52 | -8.615850e-47 |
| Msa1165780 | Msa1385720 | 0.821932 | 3.104332e-53 | -8.615850e-47 |
| Msa1169910 | Msa1385720 | 0.999188 | 7.133557e-295 | -8.615850e-47 |
| Msa1174780 | Msa1385720 | 0.811503 | 6.775685e-51 | -8.615850e-47 |
| Msa1195300 | Msa1385720 | 0.826172 | 3.138190e-54 | -8.615850e-47 |
| Msa1202580 | Msa1385720 | 0.805427 | 1.342130e-49 | -8.615850e-47 |
| Msa1209200 | Msa1385720 | 0.862100 | 6.435449e-64 | -8.615850e-47 |
| Msa1209850 | Msa1385720 | 0.867472 | 1.334788e-65 | -8.615850e-47 |
| Msa1216260 | Msa1385720 | 0.815206 | 1.041195e-51 | -8.615850e-47 |
| Msa1217580 | Msa1385720 | 0.814427 | 1.549535e-51 | -8.615850e-47 |
| Msa1218450 | Msa1385720 | 0.830333 | 3.114795e-55 | -8.615850e-47 |
| Msa0485510 | Msa1385720 | 0.811408 | 7.107952e-51 | -8.615850e-47 |
| Msa0500470 | Msa1385720 | 0.825778 | 3.893467e-54 | -8.615850e-47 |
| Msa0523430 | Msa1385720 | -0.834313 | 3.221003e-56 | -8.615850e-47 |
| Msa0531230 | Msa1385720 | 0.866105 | 3.636901e-65 | -8.615850e-47 |
| Msa0531250 | Msa1385720 | 0.803352 | 3.631682e-49 | -8.615850e-47 |
| Msa0542490 | Msa1385720 | 0.840480 | 8.479538e-58 | -8.615850e-47 |
| Msa0549450 | Msa1385720 | 0.800535 | 1.377237e-48 | -8.615850e-47 |
| Msa0554290 | Msa1385720 | 0.842578 | 2.374397e-58 | -8.615850e-47 |
| Msa0554920 | Msa1385720 | 0.806483 | 8.047367e-50 | -8.615850e-47 |
| Msa0560460 | Msa1385720 | 0.800709 | 1.269303e-48 | -8.615850e-47 |
| Msa0576120 | Msa1385720 | -0.809047 | 2.294496e-50 | -8.615850e-47 |
| Msa0578140 | Msa1385720 | 0.815949 | 7.111515e-52 | -8.615850e-47 |
| Msa0581110 | Msa1385720 | 0.807443 | 5.042552e-50 | -8.615850e-47 |
| Msa0581280 | Msa1385720 | 0.877253 | 7.287427e-69 | -8.615850e-47 |
| Msa0583360 | Msa1385720 | -0.829861 | 4.061072e-55 | -8.615850e-47 |
| Msa0586420 | Msa1385720 | 0.843555 | 1.304048e-58 | -8.615850e-47 |
| Msa0586790 | Msa1385720 | 0.815814 | 7.621237e-52 | -8.615850e-47 |
| Msa0892640 | Msa1385720 | 0.875947 | 2.060851e-68 | -8.615850e-47 |
| Msa0913240 | Msa1385720 | 0.802892 | 4.520676e-49 | -8.615850e-47 |
| Msa0921000 | Msa1385720 | 0.800743 | 1.249185e-48 | -8.615850e-47 |
| Msa0933760 | Msa1385720 | 0.824489 | 7.852774e-54 | -8.615850e-47 |
| Msa0934140 | Msa1385720 | 0.836710 | 7.979534e-57 | -8.615850e-47 |
| Msa0944200 | Msa1385720 | 0.806454 | 8.161325e-50 | -8.615850e-47 |
| Msa0958000 | Msa1385720 | 0.840558 | 8.089834e-58 | -8.615850e-47 |
| Msa0959520 | Msa1385720 | 0.806982 | 6.313888e-50 | -8.615850e-47 |
| Msa0971650 | Msa1385720 | 0.810976 | 8.816725e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385720 | MtrunA17_Chr7g0263091 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Msa1385720 | MtrunA17_Chr8g0337791 | 69.722 | 611 | 137 | 8 | 1 | 608 | 1 | 566 | 0.0 | 841 |
| Msa1385720 | MtrunA17_Chr6g0458851 | 65.556 | 90 | 26 | 2 | 206 | 295 | 1 | 85 | 3.21e-30 | 114 |
| Msa1385720 | MtrunA17_Chr6g0458691 | 71.250 | 80 | 23 | 0 | 38 | 117 | 20 | 99 | 3.35e-30 | 115 |
| Msa1385720 | MtrunA17_Chr6g0458691 | 65.306 | 49 | 17 | 0 | 415 | 463 | 97 | 145 | 1.60e-17 | 79.7 |
| Msa1385720 | MtrunA17_Chr6g0458821 | 39.873 | 158 | 50 | 4 | 433 | 587 | 24 | 139 | 4.56e-25 | 101 |
| Msa1385720 | MtrunA17_Chr6g0458761 | 40.268 | 149 | 46 | 3 | 433 | 580 | 24 | 130 | 9.74e-25 | 100 |
| Msa1385720 | MtrunA17_Chr6g0458631 | 57.831 | 83 | 31 | 1 | 35 | 117 | 6 | 84 | 7.91e-24 | 98.6 |
| Msa1385720 | MtrunA17_Chr6g0458631 | 70.455 | 44 | 13 | 0 | 437 | 480 | 76 | 119 | 4.88e-14 | 70.5 |
| Msa1385720 | MtrunA17_Chr6g0458741 | 70.455 | 44 | 13 | 0 | 437 | 480 | 15 | 58 | 1.12e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385720 | AT5G14520.1 | 59.835 | 605 | 224 | 4 | 1 | 604 | 1 | 587 | 0.0 | 716 |
Find 142 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTTGCAAGTGTTTA+AGG | 0.077657 | tig0020776:+16268 | None:intergenic |
| AAGTGGAAGGACTTCCTTTC+TGG | 0.157417 | tig0020776:+16245 | None:intergenic |
| AAAACATTTGTATCTGTTAA+AGG | 0.196641 | tig0020776:-18926 | Msa1385720:CDS |
| TGTAGAAAGTTTAGCATAGT+AGG | 0.252591 | tig0020776:+18729 | None:intergenic |
| CTTATCCTTTCCTTATATAT+AGG | 0.271329 | tig0020776:-15199 | Msa1385720:three_prime_UTR |
| CGATCCTCGCTTGGAGGCCT+TGG | 0.273183 | tig0020776:-18386 | Msa1385720:CDS |
| GAATTGATGCAGCCTCTTCT+TGG | 0.273854 | tig0020776:-18463 | Msa1385720:intron |
| GCCATATCATTCTGTGTTAT+AGG | 0.288059 | tig0020776:-15463 | Msa1385720:three_prime_UTR |
| ATCCTATCTATCTTGGGTTT+AGG | 0.307336 | tig0020776:+19386 | None:intergenic |
| GCATTGTCAAGATATTTAAA+TGG | 0.311917 | tig0020776:-18254 | Msa1385720:CDS |
| GGGAGGATACTTCAAATTAA+TGG | 0.317994 | tig0020776:+18414 | None:intergenic |
| AAGGAAGTCCTTCCACTTCC+AGG | 0.320847 | tig0020776:-16240 | Msa1385720:CDS |
| CATTTCTTCAGATCGTTGAT+AGG | 0.328002 | tig0020776:-17465 | Msa1385720:intron |
| AAAACGGTATCCTATATATA+AGG | 0.339948 | tig0020776:+15189 | None:intergenic |
| AATTTGTTCCCTACACCTTC+AGG | 0.340869 | tig0020776:+15265 | None:intergenic |
| GGAAGATCCTCAAAATCTTC+TGG | 0.343027 | tig0020776:-16202 | Msa1385720:CDS |
| TCGTATTCAGGGGAAGAAAA+AGG | 0.346079 | tig0020776:-19786 | Msa1385720:intron |
| ACGGATTATCCTATCTATCT+TGG | 0.349681 | tig0020776:+19379 | None:intergenic |
| TTTGAAGCTGCTTGAGTGCT+TGG | 0.355501 | tig0020776:+19732 | None:intergenic |
| AACTCCTCATTCACTGCAAC+AGG | 0.362433 | tig0020776:-18775 | Msa1385720:CDS |
| AAAACATTGAACGTGCAAAT+AGG | 0.364609 | tig0020776:-19424 | Msa1385720:CDS |
| CGGATTATCCTATCTATCTT+GGG | 0.365112 | tig0020776:+19380 | None:intergenic |
| AGTGCACCTGGTTCATTAGA+AGG | 0.367300 | tig0020776:+18095 | None:intergenic |
| CACGCAGTCACGAGATTGTT+AGG | 0.367719 | tig0020776:+20198 | None:intergenic |
| TGTTGATGCACTTGGAGAAT+TGG | 0.369050 | tig0020776:-19339 | Msa1385720:CDS |
| CGCTTGGAGGCCTTGGCAGC+AGG | 0.371399 | tig0020776:-18379 | Msa1385720:intron |
| GTCACGAGATTGTTAGGTTA+GGG | 0.383305 | tig0020776:+20204 | None:intergenic |
| AGAATGATATGGCATATAAC+TGG | 0.394324 | tig0020776:+15473 | None:intergenic |
| GGTCTGTGCCCCATCTTGCT+TGG | 0.395071 | tig0020776:+18166 | None:intergenic |
| TTGAAGCTGCTTGAGTGCTT+GGG | 0.401438 | tig0020776:+19733 | None:intergenic |
| AGTCACGAGATTGTTAGGTT+AGG | 0.409386 | tig0020776:+20203 | None:intergenic |
| ATATATACCTTCGACATTTG+TGG | 0.409570 | tig0020776:+19240 | None:intergenic |
| CCGAGATTTGTTGATGCACT+TGG | 0.410666 | tig0020776:-19347 | Msa1385720:CDS |
| AGCAGCTTGCAAGTGTTTAA+GGG | 0.412911 | tig0020776:+16269 | None:intergenic |
| CTGCTTGAGTGCTTGGGTCC+TGG | 0.413989 | tig0020776:+19739 | None:intergenic |
| TCAGCAAACGGAACCTGAAA+AGG | 0.419969 | tig0020776:+19699 | None:intergenic |
| GCTTCAGAATTCAGTTTAGC+AGG | 0.421503 | tig0020776:+18221 | None:intergenic |
| TCCTATAACACAGAATGATA+TGG | 0.423749 | tig0020776:+15462 | None:intergenic |
| GTAGAAAGTTTAGCATAGTA+GGG | 0.424316 | tig0020776:+18730 | None:intergenic |
| TGTTAAAGGCATATACTATC+AGG | 0.426932 | tig0020776:-18912 | Msa1385720:intron |
| TGACCAGAGCATTACTCATC+AGG | 0.431073 | tig0020776:-17552 | Msa1385720:intron |
| CTCAGAATCAAAGGAGTTGA+AGG | 0.450438 | tig0020776:-15516 | Msa1385720:exon |
| TCCCATCCTCGATCCTCGCT+TGG | 0.450758 | tig0020776:-18395 | Msa1385720:CDS |
| CACCTAAACCCAAGATAGAT+AGG | 0.452146 | tig0020776:-19388 | Msa1385720:CDS |
| CATCCTCGATCCTCGCTTGG+AGG | 0.453702 | tig0020776:-18392 | Msa1385720:CDS |
| CCAAGTGCATCAACAAATCT+CGG | 0.453864 | tig0020776:+19347 | None:intergenic |
| AACATGATACTATCATTAAA+CGG | 0.458418 | tig0020776:-15558 | Msa1385720:CDS |
| AGAATTCAGTTTAGCAGGTC+GGG | 0.461342 | tig0020776:+18226 | None:intergenic |
| TCAAATTAATGGAATGATAG+AGG | 0.462893 | tig0020776:+18425 | None:intergenic |
| GGAGTTGAAGAAAGAACTAA+AGG | 0.466055 | tig0020776:-16001 | Msa1385720:CDS |
| CTCTGGTCAGATTCTGCAAA+GGG | 0.469526 | tig0020776:+17566 | None:intergenic |
| CTTGCAAGCTGCTGCCAGAA+AGG | 0.471722 | tig0020776:-16259 | Msa1385720:CDS |
| CAAATAGAGTCCAAGCAAGA+TGG | 0.474285 | tig0020776:-18176 | Msa1385720:CDS |
| CAGCAAACGGAACCTGAAAA+GGG | 0.476889 | tig0020776:+19700 | None:intergenic |
| GTTCAAGCTAATACTGATGA+TGG | 0.483361 | tig0020776:-15895 | Msa1385720:CDS |
| CAGTTTCATGGGAGGGAGAA+GGG | 0.489826 | tig0020776:-17592 | Msa1385720:CDS |
| GGTGAAACATACACTTCAGC+AGG | 0.493983 | tig0020776:-15979 | Msa1385720:CDS |
| AGAATATGTTCAACCACAAT+GGG | 0.495352 | tig0020776:-17413 | Msa1385720:CDS |
| ATTTCTTCAGATCGTTGATA+GGG | 0.501272 | tig0020776:-17464 | Msa1385720:intron |
| TCCTCAAAATCTTCTGGCTG+AGG | 0.507721 | tig0020776:-16196 | Msa1385720:CDS |
| GAAGCTACTTGAAGCTATGC+AGG | 0.510853 | tig0020776:-15833 | Msa1385720:intron |
| TGAAGGATTCTGCATTCTCA+AGG | 0.513113 | tig0020776:-15499 | Msa1385720:three_prime_UTR |
| TACTGATGATGGCGCTGAGA+TGG | 0.513305 | tig0020776:-15884 | Msa1385720:CDS |
| ACAGTTTCATGGGAGGGAGA+AGG | 0.517134 | tig0020776:-17593 | Msa1385720:CDS |
| GTTTGTGCAGGCTGAAGTTG+AGG | 0.517949 | tig0020776:-18817 | Msa1385720:intron |
| CCTTTCGTTGACTATGACGA+AGG | 0.522226 | tig0020776:-16318 | Msa1385720:CDS |
| AAAGGCGACAAGTGCGGTGG+AGG | 0.522970 | tig0020776:+16336 | None:intergenic |
| CTCCAAGCGAGGATCGAGGA+TGG | 0.528155 | tig0020776:+18393 | None:intergenic |
| CAGAATTCAGTTTAGCAGGT+CGG | 0.528529 | tig0020776:+18225 | None:intergenic |
| TCCCTACACCTTCAGGTGTG+TGG | 0.528819 | tig0020776:+15272 | None:intergenic |
| TTTGTGCAGGCTGAAGTTGA+GGG | 0.530560 | tig0020776:-18816 | Msa1385720:intron |
| GCCTTTGGTTGAAATACATA+GGG | 0.531832 | tig0020776:-19492 | Msa1385720:CDS |
| GCCCTATGTATTTCAACCAA+AGG | 0.532381 | tig0020776:+19491 | None:intergenic |
| GAGAATATGTTCAACCACAA+TGG | 0.535969 | tig0020776:-17414 | Msa1385720:CDS |
| AAACTTTCTACAACTCTATG+AGG | 0.536109 | tig0020776:-18718 | Msa1385720:intron |
| GCTGCCAAGGCCTCCAAGCG+AGG | 0.538415 | tig0020776:+18382 | None:intergenic |
| TTAAGGGTCTTTGCATACTC+CGG | 0.541818 | tig0020776:+16285 | None:intergenic |
| AAATAAATCAAATCTCAAAA+CGG | 0.542123 | tig0020776:+15173 | None:intergenic |
| AAATAGAGTCCAAGCAAGAT+GGG | 0.543002 | tig0020776:-18175 | Msa1385720:CDS |
| TCCAAGCGAGGATCGAGGAT+GGG | 0.545604 | tig0020776:+18394 | None:intergenic |
| TAGATGAAGCTCAGAATCAA+AGG | 0.545642 | tig0020776:-15525 | Msa1385720:CDS |
| CAAAACAGTACCTGCTGCCA+AGG | 0.546500 | tig0020776:+18369 | None:intergenic |
| CAAATCTCGGGTACCTCTGA+CGG | 0.547460 | tig0020776:+19360 | None:intergenic |
| GGTGGTACAGTTTCATGGGA+GGG | 0.549135 | tig0020776:-17599 | Msa1385720:CDS |
| ACAAGCTGCATTAGTGCACC+TGG | 0.550380 | tig0020776:+18083 | None:intergenic |
| TTTGCTTTCAGTCGCAGGTA+CGG | 0.552774 | tig0020776:+19283 | None:intergenic |
| TGGTGGTACAGTTTCATGGG+AGG | 0.552915 | tig0020776:-17600 | Msa1385720:CDS |
| CTATATATAAGGAAAGGATA+AGG | 0.553916 | tig0020776:+15200 | None:intergenic |
| GTTCTTTCTTCAACTCCTCA+CGG | 0.554903 | tig0020776:+16007 | None:intergenic |
| GCCACACACCTGAAGGTGTA+GGG | 0.556228 | tig0020776:-15273 | Msa1385720:three_prime_UTR |
| TTTCAGCACCTGGAAGTGGA+AGG | 0.558041 | tig0020776:+16232 | None:intergenic |
| ACAACCTGTTGCAGTGAATG+AGG | 0.559945 | tig0020776:+18771 | None:intergenic |
| GTTGAACATATTCTCTTGAG+AGG | 0.562695 | tig0020776:+17422 | None:intergenic |
| CAAGTGCATCAACAAATCTC+GGG | 0.564221 | tig0020776:+19348 | None:intergenic |
| TGACGAAGGAGCATATGTTC+CGG | 0.565040 | tig0020776:-16304 | Msa1385720:CDS |
| ACGGCTGTTGTGAGAAGAAG+AGG | 0.565644 | tig0020776:+20164 | None:intergenic |
| TTTAATTATTCAGGCACCAA+GGG | 0.565988 | tig0020776:-17651 | Msa1385720:intron |
| AGTTTCATGGGAGGGAGAAG+GGG | 0.566307 | tig0020776:-17591 | Msa1385720:CDS |
| AAACCTGATGAGTAATGCTC+TGG | 0.568715 | tig0020776:+17549 | None:intergenic |
| GTTCTAGATTGGCGCATGAA+TGG | 0.569979 | tig0020776:-18982 | Msa1385720:intron |
| GAGTTGAAGAAAGAACTAAA+GGG | 0.578009 | tig0020776:-16000 | Msa1385720:CDS |
| TTGAACGTGCAAATAGGCTA+CGG | 0.578493 | tig0020776:-19418 | Msa1385720:CDS |
| GGTCCTGGTGACAAACTTAG+CGG | 0.588935 | tig0020776:+19754 | None:intergenic |
| AGCCTTTGGTTGAAATACAT+AGG | 0.589241 | tig0020776:-19493 | Msa1385720:CDS |
| CCTCAAAATCTTCTGGCTGA+GGG | 0.590032 | tig0020776:-16195 | Msa1385720:CDS |
| ACTGATGATGGCGCTGAGAT+GGG | 0.591885 | tig0020776:-15883 | Msa1385720:CDS |
| AGTTGCAGGCGAAGGTGAAG+AGG | 0.592188 | tig0020776:-18054 | Msa1385720:CDS |
| GGTATCCTATATATAAGGAA+AGG | 0.592698 | tig0020776:+15194 | None:intergenic |
| CAACTTCCTTCTAATGAACC+AGG | 0.593856 | tig0020776:-18101 | Msa1385720:CDS |
| GAAACTGTACCACCAAAAGC+AGG | 0.601785 | tig0020776:+17608 | None:intergenic |
| GCCGTCAGCAGCTTCAGCAA+TGG | 0.602797 | tig0020776:-20146 | Msa1385720:exon |
| TGAACGTGCAAATAGGCTAC+GGG | 0.608457 | tig0020776:-19417 | Msa1385720:CDS |
| TTTGAAAGGTGTAACTCCGA+GGG | 0.612090 | tig0020776:-19588 | Msa1385720:CDS |
| ACCATTGCTGAAGCTGCTGA+CGG | 0.614262 | tig0020776:+20145 | None:intergenic |
| GTTTAATTATTCAGGCACCA+AGG | 0.616940 | tig0020776:-17652 | Msa1385720:intron |
| CCTTCGTCATAGTCAACGAA+AGG | 0.622674 | tig0020776:+16318 | None:intergenic |
| AAATTGACAAATCCAAGAAG+AGG | 0.622926 | tig0020776:+18451 | None:intergenic |
| AAGCGAGGATCGAGGATGGG+AGG | 0.624521 | tig0020776:+18397 | None:intergenic |
| ACTGCAACAGGTTGTGTCTG+AGG | 0.625144 | tig0020776:-18763 | Msa1385720:CDS |
| GCTCTGGTCAGATTCTGCAA+AGG | 0.627546 | tig0020776:+17565 | None:intergenic |
| TGCCACACACCTGAAGGTGT+AGG | 0.629792 | tig0020776:-15274 | Msa1385720:three_prime_UTR |
| ACACAGTCAAATACCCATTG+TGG | 0.637820 | tig0020776:+17400 | None:intergenic |
| ACGAAAGGCGACAAGTGCGG+TGG | 0.638472 | tig0020776:+16333 | None:intergenic |
| AGGCCTCCAAGCGAGGATCG+AGG | 0.639249 | tig0020776:+18389 | None:intergenic |
| ATGCCGCTAAGTTTGTCACC+AGG | 0.639817 | tig0020776:-19757 | Msa1385720:CDS |
| TCTACCGCAGTCATTCAGAC+TGG | 0.643448 | tig0020776:-15934 | Msa1385720:CDS |
| AGCTTGTCCACAAATGTCGA+AGG | 0.645271 | tig0020776:-19247 | Msa1385720:intron |
| ATCGTTGATAGGGAATCTCA+AGG | 0.645647 | tig0020776:-17454 | Msa1385720:CDS |
| AAAAGCTAATATCTTTGACA+TGG | 0.648919 | tig0020776:+19525 | None:intergenic |
| TATTTGACTGTGTGAATGCA+CGG | 0.649353 | tig0020776:-17390 | Msa1385720:CDS |
| GTATTTCAACCAAAGGCTCG+TGG | 0.653492 | tig0020776:+19498 | None:intergenic |
| ATTGGATGACTGCCTTACAA+TGG | 0.657253 | tig0020776:-19321 | Msa1385720:CDS |
| TCGTGCAGCTGCAAATGAAG+CGG | 0.657904 | tig0020776:-16163 | Msa1385720:CDS |
| TAGATAGGATAATCCGTCAG+AGG | 0.658499 | tig0020776:-19373 | Msa1385720:CDS |
| TCAACGAAAGGCGACAAGTG+CGG | 0.660001 | tig0020776:+16330 | None:intergenic |
| AATAGAGTCCAAGCAAGATG+GGG | 0.666787 | tig0020776:-18174 | Msa1385720:CDS |
| GCAGGAGCAGCGATTCCGTG+AGG | 0.667655 | tig0020776:-16022 | Msa1385720:CDS |
| AGCAAACGGAACCTGAAAAG+GGG | 0.669628 | tig0020776:+19701 | None:intergenic |
| CAAAATCTTCTTGAGCAGAG+AGG | 0.675575 | tig0020776:-17985 | Msa1385720:intron |
| TTGAGGGTCAGAAAATAACA+TGG | 0.681160 | tig0020776:-18800 | Msa1385720:CDS |
| GTGAAACATACACTTCAGCA+GGG | 0.696239 | tig0020776:-15978 | Msa1385720:CDS |
| TTCACCAGTCTGAATGACTG+CGG | 0.726671 | tig0020776:+15930 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATTAACATAATCAA+TGG | + | tig0020776:16522-16541 | None:intergenic | 10.0% |
| !! | TAATATGTCATAAAGAATTT+AGG | - | tig0020776:16204-16223 | Msa1385720:CDS | 15.0% |
| !! | TGTAATTGAATAACTAAATT+TGG | + | tig0020776:16875-16894 | None:intergenic | 15.0% |
| !! | ATGTTTAAGAAATTAGTATA+TGG | + | tig0020776:16906-16925 | None:intergenic | 15.0% |
| !!! | TATCTTAATTTTTAGAATGA+AGG | - | tig0020776:18343-18362 | Msa1385720:intron | 15.0% |
| !!! | ATCTTAATTTTTAGAATGAA+GGG | - | tig0020776:18344-18363 | Msa1385720:intron | 15.0% |
| !! | ATCGAATATATTTATACAAA+GGG | + | tig0020776:18564-18583 | None:intergenic | 15.0% |
| !! | ATTTATTACTTAATCCATAT+TGG | - | tig0020776:19684-19703 | Msa1385720:intron | 15.0% |
| !!! | GATAAAATCAAAATTTTCTT+TGG | + | tig0020776:20059-20078 | None:intergenic | 15.0% |
| !! | GAAACATAAAAATATGTGAA+AGG | + | tig0020776:15329-15348 | None:intergenic | 20.0% |
| !!! | TGTTTTATTCGTTTATCTTT+CGG | - | tig0020776:15360-15379 | Msa1385720:three_prime_UTR | 20.0% |
| !! | GAAAATTTGATTCTGATATT+CGG | - | tig0020776:15758-15777 | Msa1385720:intron | 20.0% |
| !! | AAAATTTGATTCTGATATTC+GGG | - | tig0020776:15759-15778 | Msa1385720:intron | 20.0% |
| !!! | TATTCGGGTTTATAAATTTT+AGG | - | tig0020776:15774-15793 | Msa1385720:intron | 20.0% |
| !! | CTTGGAATTATATTAACTTT+AGG | - | tig0020776:16180-16199 | Msa1385720:CDS | 20.0% |
| !!! | CAATCTTTACTTTGAAAATA+AGG | - | tig0020776:16238-16257 | Msa1385720:CDS | 20.0% |
| !! | TTATATTAGTAACATCTCAT+TGG | - | tig0020776:16312-16331 | Msa1385720:CDS | 20.0% |
| !!! | GTTGCACTTTTTTTTTAAAA+AGG | + | tig0020776:16347-16366 | None:intergenic | 20.0% |
| !! | AAAACATTTGTATCTGTTAA+AGG | - | tig0020776:16470-16489 | Msa1385720:intron | 20.0% |
| !! | CGCTTAATTTAAATATGATT+TGG | + | tig0020776:16719-16738 | None:intergenic | 20.0% |
| !!! | TAGTTCAGATTTTTCATTTT+GGG | + | tig0020776:17254-17273 | None:intergenic | 20.0% |
| !!! | TTAGTTCAGATTTTTCATTT+TGG | + | tig0020776:17255-17274 | None:intergenic | 20.0% |
| !!! | TACATAGTTTTTTTTTGCTA+AGG | - | tig0020776:17634-17653 | Msa1385720:CDS | 20.0% |
| !!! | GTTTAAACTTGCATTTATTT+TGG | - | tig0020776:17693-17712 | Msa1385720:intron | 20.0% |
| !! | CATCGAATATATTTATACAA+AGG | + | tig0020776:18565-18584 | None:intergenic | 20.0% |
| !! | TAATTAATACTACAATGTCT+TGG | + | tig0020776:18603-18622 | None:intergenic | 20.0% |
| !! | AGAAAAATACTACATTATCT+CGG | + | tig0020776:19746-19765 | None:intergenic | 20.0% |
| !!! | ATAATGTAGTATTTTTCTGT+TGG | - | tig0020776:19748-19767 | Msa1385720:CDS | 20.0% |
| !! | AACATGATACTATCATTAAA+CGG | - | tig0020776:19838-19857 | Msa1385720:intron | 20.0% |
| !!! | AACTAGTTTTCTTTTATTGT+TGG | - | tig0020776:19973-19992 | Msa1385720:intron | 20.0% |
| !!! | TCTTTCGGTATTTTAATTGA+TGG | - | tig0020776:15375-15394 | Msa1385720:three_prime_UTR | 25.0% |
| ! | GCGCTAATTCATATAAATTA+AGG | + | tig0020776:15433-15452 | None:intergenic | 25.0% |
| ! | AAAATAGAATTGTCAGCAAA+CGG | + | tig0020776:15712-15731 | None:intergenic | 25.0% |
| ! | AAAAGCTAATATCTTTGACA+TGG | + | tig0020776:15874-15893 | None:intergenic | 25.0% |
| ! | TGAAAGCAAAAAAATTGATG+TGG | - | tig0020776:16126-16145 | Msa1385720:intron | 25.0% |
| !! | TTACTTTGAAAATAAGGACT+AGG | - | tig0020776:16244-16263 | Msa1385720:CDS | 25.0% |
| ! | AAGTATTATTGCAGCATAAT+AGG | + | tig0020776:16369-16388 | None:intergenic | 25.0% |
| !! | ATTTATTATGTTGTTTGTGC+AGG | - | tig0020776:16567-16586 | Msa1385720:intron | 25.0% |
| ! | GATCTATAATCCTATTACTT+TGG | + | tig0020776:16780-16799 | None:intergenic | 25.0% |
| ! | TCAAATTAATGGAATGATAG+AGG | + | tig0020776:16974-16993 | None:intergenic | 25.0% |
| ! | ATTGATCAGAAGATAATTTC+AGG | + | tig0020776:17094-17113 | None:intergenic | 25.0% |
| ! | GCATTGTCAAGATATTTAAA+TGG | - | tig0020776:17142-17161 | Msa1385720:intron | 25.0% |
| ! | AATTTACACAAACTCTAACT+CGG | + | tig0020776:17456-17475 | None:intergenic | 25.0% |
| ! | AATTGTGAAGAGTTCATATA+TGG | - | tig0020776:17496-17515 | Msa1385720:intron | 25.0% |
| !!! | TGGACTAGTGATATTATAAA+TGG | - | tig0020776:17516-17535 | Msa1385720:intron | 25.0% |
| !! | GGACTAGTGATATTATAAAT+GGG | - | tig0020776:17517-17536 | Msa1385720:intron | 25.0% |
| !!! | CTGTTTTGGTTTAATTATTC+AGG | - | tig0020776:17736-17755 | Msa1385720:intron | 25.0% |
| ! | AATAGTTGAGCAAACATTAA+AGG | + | tig0020776:17906-17925 | None:intergenic | 25.0% |
| !!! | CCAACAGAAAATTATTTTGT+GGG | - | tig0020776:18038-18057 | Msa1385720:CDS | 25.0% |
| ! | TATACAATAGAGATCATAGT+CGG | + | tig0020776:18096-18115 | None:intergenic | 25.0% |
| ! | AACAATGTTGTCAAAGAAAT+GGG | + | tig0020776:18126-18145 | None:intergenic | 25.0% |
| ! | TAACAATGTTGTCAAAGAAA+TGG | + | tig0020776:18127-18146 | None:intergenic | 25.0% |
| ! | ATTCTTATTAGTTGTGATCT+TGG | - | tig0020776:18308-18327 | Msa1385720:intron | 25.0% |
| !!! | AATTTGTTGCTAATTAACTG+CGG | - | tig0020776:18440-18459 | Msa1385720:CDS | 25.0% |
| ! | GACATTGTAGTATTAATTAG+AGG | - | tig0020776:18604-18623 | Msa1385720:intron | 25.0% |
| ! | TTTGAAGAAAGAGTAATGAA+CGG | - | tig0020776:18631-18650 | Msa1385720:intron | 25.0% |
| !! | GTATAGTAATTCCTTTTCAA+TGG | - | tig0020776:19332-19351 | Msa1385720:CDS | 25.0% |
| !!! | ATGTTCTTTCAGTTTTGTAA+CGG | - | tig0020776:20022-20041 | Msa1385720:intron | 25.0% |
| !! | TTTTTGATACATTTGGAGAA+AGG | - | tig0020776:20093-20112 | Msa1385720:intron | 25.0% |
| ! | CTATATATAAGGAAAGGATA+AGG | + | tig0020776:20199-20218 | None:intergenic | 25.0% |
| ! | CTTATCCTTTCCTTATATAT+AGG | - | tig0020776:20197-20216 | Msa1385720:five_prime_UTR | 25.0% |
| ! | AAAACGGTATCCTATATATA+AGG | + | tig0020776:20210-20229 | None:intergenic | 25.0% |
| AATTAGCGCAATAAAAAGAG+CGG | - | tig0020776:15444-15463 | Msa1385720:three_prime_UTR | 30.0% | |
| !! | CAATAAAAAGAGCGGATTAA+CGG | - | tig0020776:15452-15471 | Msa1385720:three_prime_UTR | 30.0% |
| CATCTATCTCAATTTACTCT+CGG | + | tig0020776:15480-15499 | None:intergenic | 30.0% | |
| !! | TTTCCCTTGAACTTTTTCTT+CGG | + | tig0020776:15836-15855 | None:intergenic | 30.0% |
| ! | TTCAATGTTTTTCTTTGCCT+CGG | + | tig0020776:15963-15982 | None:intergenic | 30.0% |
| AAAACATTGAACGTGCAAAT+AGG | - | tig0020776:15972-15991 | Msa1385720:CDS | 30.0% | |
| CAAAAAGATGTACCATTGTA+AGG | + | tig0020776:16090-16109 | None:intergenic | 30.0% | |
| ATATATACCTTCGACATTTG+TGG | + | tig0020776:16159-16178 | None:intergenic | 30.0% | |
| ! | ATGTCGAAGGTATATATACT+TGG | - | tig0020776:16162-16181 | Msa1385720:CDS | 30.0% |
| AAGTAAAGATTGAAGCACAA+AGG | + | tig0020776:16230-16249 | None:intergenic | 30.0% | |
| ! | TGTTAAAGGCATATACTATC+AGG | - | tig0020776:16484-16503 | Msa1385720:intron | 30.0% |
| GTAGAAAGTTTAGCATAGTA+GGG | + | tig0020776:16669-16688 | None:intergenic | 30.0% | |
| TGTAGAAAGTTTAGCATAGT+AGG | + | tig0020776:16670-16689 | None:intergenic | 30.0% | |
| AAACTTTCTACAACTCTATG+AGG | - | tig0020776:16678-16697 | Msa1385720:intron | 30.0% | |
| TCCATATCATCCAAAGTAAT+AGG | - | tig0020776:16767-16786 | Msa1385720:intron | 30.0% | |
| TCCTATTACTTTGGATGATA+TGG | + | tig0020776:16771-16790 | None:intergenic | 30.0% | |
| AAATTGACAAATCCAAGAAG+AGG | + | tig0020776:16948-16967 | None:intergenic | 30.0% | |
| ! | GCAATTCAAGTTTATAAAGC+TGG | + | tig0020776:17064-17083 | None:intergenic | 30.0% |
| ! | TGTAATGATTGCATCTGTTT+TGG | - | tig0020776:17722-17741 | Msa1385720:intron | 30.0% |
| TTTAATTATTCAGGCACCAA+GGG | - | tig0020776:17745-17764 | Msa1385720:intron | 30.0% | |
| !!! | CTTTTTGTTATTCCTGCTTT+TGG | - | tig0020776:17776-17795 | Msa1385720:intron | 30.0% |
| ATTTCTTCAGATCGTTGATA+GGG | - | tig0020776:17932-17951 | Msa1385720:intron | 30.0% | |
| AGAATATGTTCAACCACAAT+GGG | - | tig0020776:17983-18002 | Msa1385720:intron | 30.0% | |
| !! | GCCAACAGAAAATTATTTTG+TGG | - | tig0020776:18037-18056 | Msa1385720:CDS | 30.0% |
| ! | CCCACAAAATAATTTTCTGT+TGG | + | tig0020776:18041-18060 | None:intergenic | 30.0% |
| !! | CAGAAAATTATTTTGTGGGA+AGG | - | tig0020776:18042-18061 | Msa1385720:CDS | 30.0% |
| AACTTCTAATTCGTTTGTGT+TGG | - | tig0020776:18066-18085 | Msa1385720:CDS | 30.0% | |
| ! | GTATTATCTGTGCCTATTTT+AGG | - | tig0020776:18202-18221 | Msa1385720:CDS | 30.0% |
| !!! | AAAGCATTTTTGGTTTCGTT+AGG | - | tig0020776:18285-18304 | Msa1385720:intron | 30.0% |
| TTAGAATGAAGGGTTCTTAT+TGG | - | tig0020776:18354-18373 | Msa1385720:intron | 30.0% | |
| !! | TTAACATGTGTGCTTTTTGT+TGG | + | tig0020776:18498-18517 | None:intergenic | 30.0% |
| CACATGTTAAGAAAAGTTGT+TGG | - | tig0020776:18508-18527 | Msa1385720:intron | 30.0% | |
| TTGAAGAAAGAGTAATGAAC+GGG | - | tig0020776:18632-18651 | Msa1385720:intron | 30.0% | |
| AATTGTGTGTCCTAAATACA+CGG | + | tig0020776:18677-18696 | None:intergenic | 30.0% | |
| ! | AGGACACACAATTTTGTAAA+CGG | - | tig0020776:18684-18703 | Msa1385720:intron | 30.0% |
| !! | AATTTTGTAAACGGTCTTGT+AGG | - | tig0020776:18693-18712 | Msa1385720:intron | 30.0% |
| !! | ATTTTGTAAACGGTCTTGTA+GGG | - | tig0020776:18694-18713 | Msa1385720:intron | 30.0% |
| GGTCTTAAATTAGAGTCAAA+GGG | - | tig0020776:18715-18734 | Msa1385720:intron | 30.0% | |
| AGATACGATATCAAATCTAC+TGG | - | tig0020776:18892-18911 | Msa1385720:intron | 30.0% | |
| ATCAATCATATATGAACCTG+AGG | - | tig0020776:18957-18976 | Msa1385720:CDS | 30.0% | |
| TCAATCATATATGAACCTGA+GGG | - | tig0020776:18958-18977 | Msa1385720:CDS | 30.0% | |
| GATAAAAGAGGAATCACATA+CGG | + | tig0020776:19031-19050 | None:intergenic | 30.0% | |
| ! | GTGATTCCTCTTTTATCATT+AGG | - | tig0020776:19034-19053 | Msa1385720:intron | 30.0% |
| AGGAATCCTAATGATAAAAG+AGG | + | tig0020776:19043-19062 | None:intergenic | 30.0% | |
| !! | AAAGCAGAAGGTATTAAGAA+CGG | - | tig0020776:19263-19282 | Msa1385720:CDS | 30.0% |
| GAGTTGAAGAAAGAACTAAA+GGG | - | tig0020776:19396-19415 | Msa1385720:CDS | 30.0% | |
| AGAATGATATGGCATATAAC+TGG | + | tig0020776:19926-19945 | None:intergenic | 30.0% | |
| TCCTATAACACAGAATGATA+TGG | + | tig0020776:19937-19956 | None:intergenic | 30.0% | |
| !!! | AGTTTTGTAACGGATAAGTA+AGG | - | tig0020776:20032-20051 | Msa1385720:intron | 30.0% |
| ! | GATTTTATCTTACAGTTCTC+AGG | - | tig0020776:20070-20089 | Msa1385720:intron | 30.0% |
| ! | TCTCAGGTTTTTGATACATT+TGG | - | tig0020776:20086-20105 | Msa1385720:intron | 30.0% |
| GGTATCCTATATATAAGGAA+AGG | + | tig0020776:20205-20224 | None:intergenic | 30.0% | |
| AAGGCGAATTCATATCCTTA+GGG | + | tig0020776:15414-15433 | None:intergenic | 35.0% | |
| TAAGGCGAATTCATATCCTT+AGG | + | tig0020776:15415-15434 | None:intergenic | 35.0% | |
| TTTGTTCGTGTGTGAACATT+TGG | - | tig0020776:15510-15529 | Msa1385720:exon | 35.0% | |
| ! | AAATCAGTTTACCCCTTTTC+AGG | - | tig0020776:15684-15703 | Msa1385720:intron | 35.0% |
| ! | AGGAAACTGTGCATTTTGAA+AGG | - | tig0020776:15794-15813 | Msa1385720:intron | 35.0% |
| AGCCTTTGGTTGAAATACAT+AGG | - | tig0020776:15903-15922 | Msa1385720:CDS | 35.0% | |
| GCCTTTGGTTGAAATACATA+GGG | - | tig0020776:15904-15923 | Msa1385720:CDS | 35.0% | |
| GAGAAAAATTAAGAAAGCCG+AGG | - | tig0020776:15943-15962 | Msa1385720:CDS | 35.0% | |
| ATCCTATCTATCTTGGGTTT+AGG | + | tig0020776:16013-16032 | None:intergenic | 35.0% | |
| CGGATTATCCTATCTATCTT+GGG | + | tig0020776:16019-16038 | None:intergenic | 35.0% | |
| ! | ACGGATTATCCTATCTATCT+TGG | + | tig0020776:16020-16039 | None:intergenic | 35.0% |
| !!! | ATTTTTTTGCTTTCAGTCGC+AGG | + | tig0020776:16121-16140 | None:intergenic | 35.0% |
| TTGAGGGTCAGAAAATAACA+TGG | - | tig0020776:16596-16615 | Msa1385720:intron | 35.0% | |
| GGGAGGATACTTCAAATTAA+TGG | + | tig0020776:16985-17004 | None:intergenic | 35.0% | |
| AAATAGAGTCCAAGCAAGAT+GGG | - | tig0020776:17221-17240 | Msa1385720:intron | 35.0% | |
| CTAACTCGGTAAATGCTATA+AGG | + | tig0020776:17442-17461 | None:intergenic | 35.0% | |
| GTTTAATTATTCAGGCACCA+AGG | - | tig0020776:17744-17763 | Msa1385720:intron | 35.0% | |
| ACAAAAAGCAATGATTCCCT+TGG | + | tig0020776:17764-17783 | None:intergenic | 35.0% | |
| !!! | TTTGTTATTCCTGCTTTTGG+TGG | - | tig0020776:17779-17798 | Msa1385720:intron | 35.0% |
| !! | TTTTGGTGGTACAGTTTCAT+GGG | - | tig0020776:17793-17812 | Msa1385720:intron | 35.0% |
| CATTTCTTCAGATCGTTGAT+AGG | - | tig0020776:17931-17950 | Msa1385720:intron | 35.0% | |
| GTTGAACATATTCTCTTGAG+AGG | + | tig0020776:17977-17996 | None:intergenic | 35.0% | |
| GAGAATATGTTCAACCACAA+TGG | - | tig0020776:17982-18001 | Msa1385720:intron | 35.0% | |
| TATTTGACTGTGTGAATGCA+CGG | - | tig0020776:18006-18025 | Msa1385720:CDS | 35.0% | |
| TCAGAACAAATAAGAACCCT+AGG | + | tig0020776:18232-18251 | None:intergenic | 35.0% | |
| !!! | TGGTCTGAGAAAAGCATTTT+TGG | - | tig0020776:18275-18294 | Msa1385720:intron | 35.0% |
| TTCCAATAATAAGGAACGGA+GGG | + | tig0020776:18472-18491 | None:intergenic | 35.0% | |
| GAGGTTCCAATAATAAGGAA+CGG | + | tig0020776:18476-18495 | None:intergenic | 35.0% | |
| TGTTGGAGGTTCCAATAATA+AGG | + | tig0020776:18481-18500 | None:intergenic | 35.0% | |
| ACGGGTCTATAAATTTGTAG+AGG | - | tig0020776:18650-18669 | Msa1385720:intron | 35.0% | |
| CGGGTCTATAAATTTGTAGA+GGG | - | tig0020776:18651-18670 | Msa1385720:intron | 35.0% | |
| GGGTCTTAAATTAGAGTCAA+AGG | - | tig0020776:18714-18733 | Msa1385720:intron | 35.0% | |
| CCTAATTATCTATGCAGTTG+GGG | + | tig0020776:18796-18815 | None:intergenic | 35.0% | |
| CCCTAATTATCTATGCAGTT+GGG | + | tig0020776:18797-18816 | None:intergenic | 35.0% | |
| CCCAACTGCATAGATAATTA+GGG | - | tig0020776:18794-18813 | Msa1385720:CDS | 35.0% | |
| TCCCTAATTATCTATGCAGT+TGG | + | tig0020776:18798-18817 | None:intergenic | 35.0% | |
| ACTGCATAGATAATTAGGGA+CGG | - | tig0020776:18798-18817 | Msa1385720:CDS | 35.0% | |
| CATCAGGATTGTTAAATGAG+TGG | - | tig0020776:19288-19307 | Msa1385720:CDS | 35.0% | |
| AGGATTGTTAAATGAGTGGA+GGG | - | tig0020776:19292-19311 | Msa1385720:CDS | 35.0% | |
| GGAGTTGAAGAAAGAACTAA+AGG | - | tig0020776:19395-19414 | Msa1385720:CDS | 35.0% | |
| GTTCAAGCTAATACTGATGA+TGG | - | tig0020776:19501-19520 | Msa1385720:CDS | 35.0% | |
| !! | TTTTGTTGTCACGTAGAAAG+AGG | - | tig0020776:19541-19560 | Msa1385720:CDS | 35.0% |
| TAGATGAAGCTCAGAATCAA+AGG | - | tig0020776:19871-19890 | Msa1385720:intron | 35.0% | |
| GCCATATCATTCTGTGTTAT+AGG | - | tig0020776:19933-19952 | Msa1385720:intron | 35.0% | |
| !! | AGGATAAGGTCGTTTTAACA+AGG | + | tig0020776:20185-20204 | None:intergenic | 35.0% |
| GTCACGAGATTGTTAGGTTA+GGG | + | tig0020776:15195-15214 | None:intergenic | 40.0% | |
| AGTCACGAGATTGTTAGGTT+AGG | + | tig0020776:15196-15215 | None:intergenic | 40.0% | |
| GAAGAGATGAGAAGAACTCA+CGG | + | tig0020776:15294-15313 | None:intergenic | 40.0% | |
| !!! | GGTAGTGATTTTTTCCCCTA+AGG | - | tig0020776:15396-15415 | Msa1385720:three_prime_UTR | 40.0% |
| AGGCGAATTCATATCCTTAG+GGG | + | tig0020776:15413-15432 | None:intergenic | 40.0% | |
| GAATCTCTCTGTCGTATTCA+GGG | - | tig0020776:15599-15618 | Msa1385720:intron | 40.0% | |
| AATCTCTCTGTCGTATTCAG+GGG | - | tig0020776:15600-15619 | Msa1385720:intron | 40.0% | |
| TCGTATTCAGGGGAAGAAAA+AGG | - | tig0020776:15610-15629 | Msa1385720:intron | 40.0% | |
| ATTCAGGGGAAGAAAAAGGA+AGG | - | tig0020776:15614-15633 | Msa1385720:intron | 40.0% | |
| !! | TTTTGAAAGGTGTAACTCCG+AGG | - | tig0020776:15807-15826 | Msa1385720:intron | 40.0% |
| ! | TTTGAAAGGTGTAACTCCGA+GGG | - | tig0020776:15808-15827 | Msa1385720:intron | 40.0% |
| GAGCCGAAGAAAAAGTTCAA+GGG | - | tig0020776:15830-15849 | Msa1385720:intron | 40.0% | |
| GCCCTATGTATTTCAACCAA+AGG | + | tig0020776:15908-15927 | None:intergenic | 40.0% | |
| TTGAACGTGCAAATAGGCTA+CGG | - | tig0020776:15978-15997 | Msa1385720:CDS | 40.0% | |
| CACCTAAACCCAAGATAGAT+AGG | - | tig0020776:16008-16027 | Msa1385720:CDS | 40.0% | |
| TAGATAGGATAATCCGTCAG+AGG | - | tig0020776:16023-16042 | Msa1385720:CDS | 40.0% | |
| CAAGTGCATCAACAAATCTC+GGG | + | tig0020776:16051-16070 | None:intergenic | 40.0% | |
| CCAAGTGCATCAACAAATCT+CGG | + | tig0020776:16052-16071 | None:intergenic | 40.0% | |
| TGTTGATGCACTTGGAGAAT+TGG | - | tig0020776:16057-16076 | Msa1385720:intron | 40.0% | |
| ATTGGATGACTGCCTTACAA+TGG | - | tig0020776:16075-16094 | Msa1385720:intron | 40.0% | |
| AGAATTCAGTTTAGCAGGTC+GGG | + | tig0020776:17173-17192 | None:intergenic | 40.0% | |
| CAGAATTCAGTTTAGCAGGT+CGG | + | tig0020776:17174-17193 | None:intergenic | 40.0% | |
| GCTTCAGAATTCAGTTTAGC+AGG | + | tig0020776:17178-17197 | None:intergenic | 40.0% | |
| CAAATAGAGTCCAAGCAAGA+TGG | - | tig0020776:17220-17239 | Msa1385720:intron | 40.0% | |
| AATAGAGTCCAAGCAAGATG+GGG | - | tig0020776:17222-17241 | Msa1385720:intron | 40.0% | |
| CAACTTCCTTCTAATGAACC+AGG | - | tig0020776:17295-17314 | Msa1385720:intron | 40.0% | |
| !! | CAGCTTGTTGAAAAAGTTGC+AGG | - | tig0020776:17328-17347 | Msa1385720:intron | 40.0% |
| CAAAATCTTCTTGAGCAGAG+AGG | - | tig0020776:17411-17430 | Msa1385720:CDS | 40.0% | |
| !! | CTTTTGGTGGTACAGTTTCA+TGG | - | tig0020776:17792-17811 | Msa1385720:intron | 40.0% |
| AAACCTGATGAGTAATGCTC+TGG | + | tig0020776:17850-17869 | None:intergenic | 40.0% | |
| ! | ATCGTTGATAGGGAATCTCA+AGG | - | tig0020776:17942-17961 | Msa1385720:intron | 40.0% |
| ACACAGTCAAATACCCATTG+TGG | + | tig0020776:17999-18018 | None:intergenic | 40.0% | |
| !! | GGATGCACAAGAACTTGTTT+TGG | + | tig0020776:18162-18181 | None:intergenic | 40.0% |
| CAACAGCAATAACCGAAGAA+CGG | + | tig0020776:18183-18202 | None:intergenic | 40.0% | |
| !!! | TGCCTATTTTAGGTTCACCT+AGG | - | tig0020776:18212-18231 | Msa1385720:CDS | 40.0% |
| !!! | GCCTATTTTAGGTTCACCTA+GGG | - | tig0020776:18213-18232 | Msa1385720:CDS | 40.0% |
| ACCCTAGGTGAACCTAAAAT+AGG | + | tig0020776:18217-18236 | None:intergenic | 40.0% | |
| ! | TCATCAGCATGTGCTTCTTT+TGG | - | tig0020776:18255-18274 | Msa1385720:CDS | 40.0% |
| TCATCAGTTAGTCGTGATCT+TGG | - | tig0020776:18386-18405 | Msa1385720:CDS | 40.0% | |
| GTTCCAATAATAAGGAACGG+AGG | + | tig0020776:18473-18492 | None:intergenic | 40.0% | |
| !! | ACATGTGTGCTTTTTGTTGG+AGG | + | tig0020776:18495-18514 | None:intergenic | 40.0% |
| GGAGTAACTCTTATCTGTCA+TGG | - | tig0020776:18736-18755 | Msa1385720:CDS | 40.0% | |
| CCCCAACTGCATAGATAATT+AGG | - | tig0020776:18793-18812 | Msa1385720:CDS | 40.0% | |
| CATAGATAATTAGGGACGGA+GGG | - | tig0020776:18802-18821 | Msa1385720:CDS | 40.0% | |
| ATAGATAATTAGGGACGGAG+GGG | - | tig0020776:18803-18822 | Msa1385720:CDS | 40.0% | |
| TTCTTCTTATCTGTTCCCTC+AGG | + | tig0020776:18976-18995 | None:intergenic | 40.0% | |
| TTAAGGGTCTTTGCATACTC+CGG | + | tig0020776:19114-19133 | None:intergenic | 40.0% | |
| AGCAGCTTGCAAGTGTTTAA+GGG | + | tig0020776:19130-19149 | None:intergenic | 40.0% | |
| GGAAGATCCTCAAAATCTTC+TGG | - | tig0020776:19194-19213 | Msa1385720:intron | 40.0% | |
| CAGGATTGTTAAATGAGTGG+AGG | - | tig0020776:19291-19310 | Msa1385720:CDS | 40.0% | |
| CTGCAAAACAGCCATTGAAA+AGG | + | tig0020776:19346-19365 | None:intergenic | 40.0% | |
| GTTCTTTCTTCAACTCCTCA+CGG | + | tig0020776:19392-19411 | None:intergenic | 40.0% | |
| GTGAAACATACACTTCAGCA+GGG | - | tig0020776:19418-19437 | Msa1385720:CDS | 40.0% | |
| ! | AATCCATATTGGTTGCCAAG+TGG | - | tig0020776:19695-19714 | Msa1385720:intron | 40.0% |
| CTCAGAATCAAAGGAGTTGA+AGG | - | tig0020776:19880-19899 | Msa1385720:intron | 40.0% | |
| TGAAGGATTCTGCATTCTCA+AGG | - | tig0020776:19897-19916 | Msa1385720:intron | 40.0% | |
| AAAAATTGCCACACACCTGA+AGG | - | tig0020776:20116-20135 | Msa1385720:intron | 40.0% | |
| ! | AATTTGTTCCCTACACCTTC+AGG | + | tig0020776:20134-20153 | None:intergenic | 40.0% |
| CGAATCTCTCTGTCGTATTC+AGG | - | tig0020776:15598-15617 | Msa1385720:intron | 45.0% | |
| TTGAAGCTGCTTGAGTGCTT+GGG | + | tig0020776:15666-15685 | None:intergenic | 45.0% | |
| ! | TTTGAAGCTGCTTGAGTGCT+TGG | + | tig0020776:15667-15686 | None:intergenic | 45.0% |
| AGCAAACGGAACCTGAAAAG+GGG | + | tig0020776:15698-15717 | None:intergenic | 45.0% | |
| CAGCAAACGGAACCTGAAAA+GGG | + | tig0020776:15699-15718 | None:intergenic | 45.0% | |
| TCAGCAAACGGAACCTGAAA+AGG | + | tig0020776:15700-15719 | None:intergenic | 45.0% | |
| !! | AACTTTTTCTTCGGCTCCCT+CGG | + | tig0020776:15827-15846 | None:intergenic | 45.0% |
| GGAGCCGAAGAAAAAGTTCA+AGG | - | tig0020776:15829-15848 | Msa1385720:intron | 45.0% | |
| ! | CTTTTTACACCACGAGCCTT+TGG | - | tig0020776:15889-15908 | Msa1385720:CDS | 45.0% |
| GTATTTCAACCAAAGGCTCG+TGG | + | tig0020776:15901-15920 | None:intergenic | 45.0% | |
| TGAACGTGCAAATAGGCTAC+GGG | - | tig0020776:15979-15998 | Msa1385720:CDS | 45.0% | |
| !! | CCGAGATTTGTTGATGCACT+TGG | - | tig0020776:16049-16068 | Msa1385720:intron | 45.0% |
| TTTGCTTTCAGTCGCAGGTA+CGG | + | tig0020776:16116-16135 | None:intergenic | 45.0% | |
| AGCTTGTCCACAAATGTCGA+AGG | - | tig0020776:16149-16168 | Msa1385720:CDS | 45.0% | |
| ! | TGTCTGCCTGTGTTCTAGAT+TGG | - | tig0020776:16403-16422 | Msa1385720:intron | 45.0% |
| ! | GTTCTAGATTGGCGCATGAA+TGG | - | tig0020776:16414-16433 | Msa1385720:intron | 45.0% |
| TTTGTGCAGGCTGAAGTTGA+GGG | - | tig0020776:16580-16599 | Msa1385720:intron | 45.0% | |
| AACTCCTCATTCACTGCAAC+AGG | - | tig0020776:16621-16640 | Msa1385720:intron | 45.0% | |
| ACAACCTGTTGCAGTGAATG+AGG | + | tig0020776:16628-16647 | None:intergenic | 45.0% | |
| GAATTGATGCAGCCTCTTCT+TGG | - | tig0020776:16933-16952 | Msa1385720:intron | 45.0% | |
| AGTGCACCTGGTTCATTAGA+AGG | + | tig0020776:17304-17323 | None:intergenic | 45.0% | |
| GTTGAAAAAGTTGCAGGCGA+AGG | - | tig0020776:17334-17353 | Msa1385720:intron | 45.0% | |
| GAAACTGTACCACCAAAAGC+AGG | + | tig0020776:17791-17810 | None:intergenic | 45.0% | |
| CTCTGGTCAGATTCTGCAAA+GGG | + | tig0020776:17833-17852 | None:intergenic | 45.0% | |
| ! | TGACCAGAGCATTACTCATC+AGG | - | tig0020776:17844-17863 | Msa1385720:intron | 45.0% |
| GTTCTTGTGCATCCGTTCTT+CGG | - | tig0020776:18168-18187 | Msa1385720:CDS | 45.0% | |
| CTCCCTCCGTTCCTTATTAT+TGG | - | tig0020776:18467-18486 | Msa1385720:intron | 45.0% | |
| TTGTAGAGGGCCGTGTATTT+AGG | - | tig0020776:18664-18683 | Msa1385720:intron | 45.0% | |
| GCATAGATAATTAGGGACGG+AGG | - | tig0020776:18801-18820 | Msa1385720:CDS | 45.0% | |
| TAGATAATTAGGGACGGAGG+GGG | - | tig0020776:18804-18823 | Msa1385720:CDS | 45.0% | |
| CCTTCGTCATAGTCAACGAA+AGG | + | tig0020776:19081-19100 | None:intergenic | 45.0% | |
| ! | CCTTTCGTTGACTATGACGA+AGG | - | tig0020776:19078-19097 | Msa1385720:intron | 45.0% |
| ! | TGACGAAGGAGCATATGTTC+CGG | - | tig0020776:19092-19111 | Msa1385720:intron | 45.0% |
| CAGCAGCTTGCAAGTGTTTA+AGG | + | tig0020776:19131-19150 | None:intergenic | 45.0% | |
| AAGTGGAAGGACTTCCTTTC+TGG | + | tig0020776:19154-19173 | None:intergenic | 45.0% | |
| !!! | TCTTTTTCAGCACCTGGAAG+TGG | + | tig0020776:19171-19190 | None:intergenic | 45.0% |
| !! | TCCAGGTGCTGAAAAAGATC+TGG | - | tig0020776:19173-19192 | Msa1385720:intron | 45.0% |
| !!! | TCCAGATCTTTTTCAGCACC+TGG | + | tig0020776:19177-19196 | None:intergenic | 45.0% |
| ! | TCCTCAAAATCTTCTGGCTG+AGG | - | tig0020776:19200-19219 | Msa1385720:intron | 45.0% |
| ! | CCTCAAAATCTTCTGGCTGA+GGG | - | tig0020776:19201-19220 | Msa1385720:intron | 45.0% |
| GGTATTAAGAACGGTGCATC+AGG | - | tig0020776:19272-19291 | Msa1385720:CDS | 45.0% | |
| ! | TGTTTTGCAGCTGATGAAGC+AGG | - | tig0020776:19356-19375 | Msa1385720:CDS | 45.0% |
| GGTGAAACATACACTTCAGC+AGG | - | tig0020776:19417-19436 | Msa1385720:CDS | 45.0% | |
| TTCACCAGTCTGAATGACTG+CGG | + | tig0020776:19469-19488 | None:intergenic | 45.0% | |
| GAAGCTACTTGAAGCTATGC+AGG | - | tig0020776:19563-19582 | Msa1385720:CDS | 45.0% | |
| CACGCAGTCACGAGATTGTT+AGG | + | tig0020776:15201-15220 | None:intergenic | 50.0% | |
| ACGGCTGTTGTGAGAAGAAG+AGG | + | tig0020776:15235-15254 | None:intergenic | 50.0% | |
| ACCATTGCTGAAGCTGCTGA+CGG | + | tig0020776:15254-15273 | None:intergenic | 50.0% | |
| AGATGAGAAGAACTCACGGC+GGG | + | tig0020776:15290-15309 | None:intergenic | 50.0% | |
| GAGATGAGAAGAACTCACGG+CGG | + | tig0020776:15291-15310 | None:intergenic | 50.0% | |
| ATGCCGCTAAGTTTGTCACC+AGG | - | tig0020776:15639-15658 | Msa1385720:intron | 50.0% | |
| GGTCCTGGTGACAAACTTAG+CGG | + | tig0020776:15645-15664 | None:intergenic | 50.0% | |
| CAAATCTCGGGTACCTCTGA+CGG | + | tig0020776:16039-16058 | None:intergenic | 50.0% | |
| ! | CATGCGCCAATCTAGAACAC+AGG | + | tig0020776:16412-16431 | None:intergenic | 50.0% |
| GTTTGTGCAGGCTGAAGTTG+AGG | - | tig0020776:16579-16598 | Msa1385720:intron | 50.0% | |
| ACTGCAACAGGTTGTGTCTG+AGG | - | tig0020776:16633-16652 | Msa1385720:intron | 50.0% | |
| CAAAACAGTACCTGCTGCCA+AGG | + | tig0020776:17030-17049 | None:intergenic | 50.0% | |
| ACAAGCTGCATTAGTGCACC+TGG | + | tig0020776:17316-17335 | None:intergenic | 50.0% | |
| TGGTGGTACAGTTTCATGGG+AGG | - | tig0020776:17796-17815 | Msa1385720:intron | 50.0% | |
| GGTGGTACAGTTTCATGGGA+GGG | - | tig0020776:17797-17816 | Msa1385720:intron | 50.0% | |
| ACAGTTTCATGGGAGGGAGA+AGG | - | tig0020776:17803-17822 | Msa1385720:intron | 50.0% | |
| CAGTTTCATGGGAGGGAGAA+GGG | - | tig0020776:17804-17823 | Msa1385720:intron | 50.0% | |
| AGTTTCATGGGAGGGAGAAG+GGG | - | tig0020776:17805-17824 | Msa1385720:intron | 50.0% | |
| GCTCTGGTCAGATTCTGCAA+AGG | + | tig0020776:17834-17853 | None:intergenic | 50.0% | |
| ACGGAGGGGGTAACTCTTAT+CGG | - | tig0020776:18817-18836 | Msa1385720:intron | 50.0% | |
| TCAACGAAAGGCGACAAGTG+CGG | + | tig0020776:19069-19088 | None:intergenic | 50.0% | |
| AAGGAAGTCCTTCCACTTCC+AGG | - | tig0020776:19156-19175 | Msa1385720:intron | 50.0% | |
| TTTCAGCACCTGGAAGTGGA+AGG | + | tig0020776:19167-19186 | None:intergenic | 50.0% | |
| ! | CCCTCAGCCAGAAGATTTTG+AGG | + | tig0020776:19204-19223 | None:intergenic | 50.0% |
| TCGTGCAGCTGCAAATGAAG+CGG | - | tig0020776:19233-19252 | Msa1385720:intron | 50.0% | |
| AGCGGCTGAGAAAAAGCAGA+AGG | - | tig0020776:19251-19270 | Msa1385720:CDS | 50.0% | |
| TCTACCGCAGTCATTCAGAC+TGG | - | tig0020776:19462-19481 | Msa1385720:CDS | 50.0% | |
| !! | TACTGATGATGGCGCTGAGA+TGG | - | tig0020776:19512-19531 | Msa1385720:CDS | 50.0% |
| !! | ACTGATGATGGCGCTGAGAT+GGG | - | tig0020776:19513-19532 | Msa1385720:CDS | 50.0% |
| ! | CTGCCACTTGGCAACCAATA+TGG | + | tig0020776:19701-19720 | None:intergenic | 50.0% |
| ! | CATATTGGTTGCCAAGTGGC+AGG | - | tig0020776:19699-19718 | Msa1385720:intron | 50.0% |
| TACCAGACAAACCTGCCACT+TGG | + | tig0020776:19713-19732 | None:intergenic | 50.0% | |
| TCCAAGCGAGGATCGAGGAT+GGG | + | tig0020776:17005-17024 | None:intergenic | 55.0% | |
| AGTTGCAGGCGAAGGTGAAG+AGG | - | tig0020776:17342-17361 | Msa1385720:intron | 55.0% | |
| CTTGCAAGCTGCTGCCAGAA+AGG | - | tig0020776:19137-19156 | Msa1385720:intron | 55.0% | |
| TGCCAAGTGGCAGGTTTGTC+TGG | - | tig0020776:19708-19727 | Msa1385720:intron | 55.0% | |
| ! | TGCCACACACCTGAAGGTGT+AGG | - | tig0020776:20122-20141 | Msa1385720:intron | 55.0% |
| ! | GCCACACACCTGAAGGTGTA+GGG | - | tig0020776:20123-20142 | Msa1385720:intron | 55.0% |
| TCCCTACACCTTCAGGTGTG+TGG | + | tig0020776:20127-20146 | None:intergenic | 55.0% | |
| GCCGTCAGCAGCTTCAGCAA+TGG | - | tig0020776:15250-15269 | Msa1385720:three_prime_UTR | 60.0% | |
| CTGCTTGAGTGCTTGGGTCC+TGG | + | tig0020776:15660-15679 | None:intergenic | 60.0% | |
| AAGCGAGGATCGAGGATGGG+AGG | + | tig0020776:17002-17021 | None:intergenic | 60.0% | |
| TCCCATCCTCGATCCTCGCT+TGG | - | tig0020776:17001-17020 | Msa1385720:intron | 60.0% | |
| CTCCAAGCGAGGATCGAGGA+TGG | + | tig0020776:17006-17025 | None:intergenic | 60.0% | |
| CATCCTCGATCCTCGCTTGG+AGG | - | tig0020776:17004-17023 | Msa1385720:intron | 60.0% | |
| GGTCTGTGCCCCATCTTGCT+TGG | + | tig0020776:17233-17252 | None:intergenic | 60.0% | |
| AAAGGCGACAAGTGCGGTGG+AGG | + | tig0020776:19063-19082 | None:intergenic | 60.0% | |
| ACGAAAGGCGACAAGTGCGG+TGG | + | tig0020776:19066-19085 | None:intergenic | 60.0% | |
| AGGCCTCCAAGCGAGGATCG+AGG | + | tig0020776:17010-17029 | None:intergenic | 65.0% | |
| CGATCCTCGCTTGGAGGCCT+TGG | - | tig0020776:17010-17029 | Msa1385720:intron | 65.0% | |
| GCAGGAGCAGCGATTCCGTG+AGG | - | tig0020776:19374-19393 | Msa1385720:CDS | 65.0% | |
| GCTGCCAAGGCCTCCAAGCG+AGG | + | tig0020776:17017-17036 | None:intergenic | 70.0% | |
| CGCTTGGAGGCCTTGGCAGC+AGG | - | tig0020776:17017-17036 | Msa1385720:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020776 | gene | 15180 | 20238 | 15180 | ID=Msa1385720;Name=Msa1385720 |
| tig0020776 | mRNA | 15180 | 20238 | 15180 | ID=Msa1385720-mRNA-1;Parent=Msa1385720;Name=Msa1385720-mRNA-1;_AED=0.08;_eAED=0.08;_QI=89|1|1|1|1|1|12|339|608 |
| tig0020776 | exon | 15180 | 15605 | 15180 | ID=Msa1385720-mRNA-1:exon:9817;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 15834 | 16052 | 15834 | ID=Msa1385720-mRNA-1:exon:9816;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 16146 | 16362 | 16146 | ID=Msa1385720-mRNA-1:exon:9815;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 17355 | 17476 | 17355 | ID=Msa1385720-mRNA-1:exon:9814;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 17553 | 17660 | 17553 | ID=Msa1385720-mRNA-1:exon:9813;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 17986 | 18284 | 17986 | ID=Msa1385720-mRNA-1:exon:9812;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 18380 | 18473 | 18380 | ID=Msa1385720-mRNA-1:exon:9811;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 18719 | 18829 | 18719 | ID=Msa1385720-mRNA-1:exon:9810;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 18913 | 18997 | 18913 | ID=Msa1385720-mRNA-1:exon:9809;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 19248 | 19622 | 19248 | ID=Msa1385720-mRNA-1:exon:9808;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 19713 | 19798 | 19713 | ID=Msa1385720-mRNA-1:exon:9807;Parent=Msa1385720-mRNA-1 |
| tig0020776 | exon | 20126 | 20238 | 20126 | ID=Msa1385720-mRNA-1:exon:9806;Parent=Msa1385720-mRNA-1 |
| tig0020776 | five_prime_UTR | 20150 | 20238 | 20150 | ID=Msa1385720-mRNA-1:five_prime_utr;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 20126 | 20149 | 20126 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 19713 | 19798 | 19713 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 19248 | 19622 | 19248 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 18913 | 18997 | 18913 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 18719 | 18829 | 18719 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 18380 | 18473 | 18380 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 17986 | 18284 | 17986 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 17553 | 17660 | 17553 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 17355 | 17476 | 17355 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 16146 | 16362 | 16146 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 15834 | 16052 | 15834 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | CDS | 15519 | 15605 | 15519 | ID=Msa1385720-mRNA-1:cds;Parent=Msa1385720-mRNA-1 |
| tig0020776 | three_prime_UTR | 15180 | 15518 | 15180 | ID=Msa1385720-mRNA-1:three_prime_utr;Parent=Msa1385720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
