Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169910 | XP_003625518.1 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169910 | sp|Q851S7|PESC_ORYSJ | 59.477 | 612 | 235 | 6 | 1 | 608 | 1 | 603 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169910 | G7L0M1 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1169910 | 0.836359 | 9.802258e-57 | -8.615850e-47 |
| Msa0016540 | Msa1169910 | 0.812641 | 3.828320e-51 | -8.615850e-47 |
| Msa0024930 | Msa1169910 | 0.802362 | 5.815372e-49 | -8.615850e-47 |
| Msa0028930 | Msa1169910 | 0.813042 | 3.126171e-51 | -8.615850e-47 |
| Msa0030200 | Msa1169910 | 0.808643 | 2.799897e-50 | -8.615850e-47 |
| Msa0032810 | Msa1169910 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0037770 | Msa1169910 | 0.842721 | 2.175722e-58 | -8.615850e-47 |
| Msa0046110 | Msa1169910 | -0.805549 | 1.265418e-49 | -8.615850e-47 |
| Msa0047160 | Msa1169910 | 0.819772 | 9.741858e-53 | -8.615850e-47 |
| Msa0059040 | Msa1169910 | 0.810071 | 1.382824e-50 | -8.615850e-47 |
| Msa0059110 | Msa1169910 | 0.802578 | 5.250402e-49 | -8.615850e-47 |
| Msa0067590 | Msa1169910 | -0.805316 | 1.416057e-49 | -8.615850e-47 |
| Msa0091560 | Msa1169910 | 0.801726 | 7.860765e-49 | -8.615850e-47 |
| Msa0094470 | Msa1169910 | 0.807098 | 5.965634e-50 | -8.615850e-47 |
| Msa0104670 | Msa1169910 | 0.805016 | 1.635753e-49 | -8.615850e-47 |
| Msa0105370 | Msa1169910 | 0.823178 | 1.593387e-53 | -8.615850e-47 |
| Msa0106620 | Msa1169910 | 0.809531 | 1.807088e-50 | -8.615850e-47 |
| Msa0106710 | Msa1169910 | 0.811508 | 6.758629e-51 | -8.615850e-47 |
| Msa0115130 | Msa1169910 | 0.810977 | 8.811741e-51 | -8.615850e-47 |
| Msa0115400 | Msa1169910 | 0.815772 | 7.790640e-52 | -8.615850e-47 |
| Msa0118590 | Msa1169910 | 0.800631 | 1.316557e-48 | -8.615850e-47 |
| Msa0615580 | Msa1169910 | 0.823899 | 1.080340e-53 | -8.615850e-47 |
| Msa0617170 | Msa1169910 | 0.820015 | 8.576209e-53 | -8.615850e-47 |
| Msa0626630 | Msa1169910 | 0.838710 | 2.446081e-57 | -8.615850e-47 |
| Msa0627380 | Msa1169910 | 0.810859 | 9.349565e-51 | -8.615850e-47 |
| Msa0628410 | Msa1169910 | 0.813381 | 2.634174e-51 | -8.615850e-47 |
| Msa0630770 | Msa1169910 | -0.805733 | 1.157811e-49 | -8.615850e-47 |
| Msa0634890 | Msa1169910 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0645620 | Msa1169910 | 0.805721 | 1.164174e-49 | -8.615850e-47 |
| Msa0648780 | Msa1169910 | 0.855654 | 5.455684e-62 | -8.615850e-47 |
| Msa0664560 | Msa1169910 | 0.825734 | 3.988363e-54 | -8.615850e-47 |
| Msa0664750 | Msa1169910 | 0.848825 | 4.788496e-60 | -8.615850e-47 |
| Msa0665100 | Msa1169910 | 0.812805 | 3.524663e-51 | -8.615850e-47 |
| Msa0672550 | Msa1169910 | 0.852763 | 3.728499e-61 | -8.615850e-47 |
| Msa0687440 | Msa1169910 | 0.808012 | 3.816762e-50 | -8.615850e-47 |
| Msa0689440 | Msa1169910 | 0.847620 | 1.030858e-59 | -8.615850e-47 |
| Msa0697680 | Msa1169910 | 0.837554 | 4.853961e-57 | -8.615850e-47 |
| Msa0707250 | Msa1169910 | 0.800286 | 1.547466e-48 | -8.615850e-47 |
| Msa0712560 | Msa1169910 | 0.802962 | 4.374113e-49 | -8.615850e-47 |
| Msa0719610 | Msa1169910 | 0.806340 | 8.626741e-50 | -8.615850e-47 |
| Msa0746960 | Msa1169910 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0763330 | Msa1169910 | 0.813107 | 3.026264e-51 | -8.615850e-47 |
| Msa0791090 | Msa1169910 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa0822500 | Msa1169910 | 0.807507 | 4.886783e-50 | -8.615850e-47 |
| Msa0831100 | Msa1169910 | 0.801234 | 9.914065e-49 | -8.615850e-47 |
| Msa0120880 | Msa1169910 | 0.899799 | 1.385139e-77 | -8.615850e-47 |
| Msa0124450 | Msa1169910 | 0.837135 | 6.215578e-57 | -8.615850e-47 |
| Msa0127100 | Msa1169910 | 0.813753 | 2.182295e-51 | -8.615850e-47 |
| Msa0129340 | Msa1169910 | 0.809239 | 2.087717e-50 | -8.615850e-47 |
| Msa0140770 | Msa1169910 | -0.842937 | 1.905782e-58 | -8.615850e-47 |
| Msa0149440 | Msa1169910 | 0.849572 | 2.967541e-60 | -8.615850e-47 |
| Msa0156760 | Msa1169910 | 0.818483 | 1.914729e-52 | -8.615850e-47 |
| Msa0179190 | Msa1169910 | 0.814901 | 1.216404e-51 | -8.615850e-47 |
| Msa0190350 | Msa1169910 | 0.839465 | 1.559546e-57 | -8.615850e-47 |
| Msa0202110 | Msa1169910 | 0.800416 | 1.455882e-48 | -8.615850e-47 |
| Msa0202410 | Msa1169910 | 0.847327 | 1.240200e-59 | -8.615850e-47 |
| Msa0204960 | Msa1169910 | 0.846934 | 1.589304e-59 | -8.615850e-47 |
| Msa0209140 | Msa1169910 | 0.804542 | 2.055353e-49 | -8.615850e-47 |
| Msa0220990 | Msa1169910 | 0.811619 | 6.396008e-51 | -8.615850e-47 |
| Msa0223330 | Msa1169910 | 0.807712 | 4.420122e-50 | -8.615850e-47 |
| Msa0231190 | Msa1169910 | 0.805637 | 1.212646e-49 | -8.615850e-47 |
| Msa0232360 | Msa1169910 | 0.809947 | 1.471018e-50 | -8.615850e-47 |
| Msa0233370 | Msa1169910 | 0.800458 | 1.427790e-48 | -8.615850e-47 |
| Msa0237210 | Msa1169910 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0385500 | Msa1169910 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa0385830 | Msa1169910 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa0403500 | Msa1169910 | 0.850985 | 1.191746e-60 | -8.615850e-47 |
| Msa0419720 | Msa1169910 | 0.805074 | 1.591089e-49 | -8.615850e-47 |
| Msa0430060 | Msa1169910 | 0.810770 | 9.769408e-51 | -8.615850e-47 |
| Msa0430150 | Msa1169910 | 0.814139 | 1.793343e-51 | -8.615850e-47 |
| Msa0437020 | Msa1169910 | 0.978946 | 6.697261e-147 | -8.615850e-47 |
| Msa0450400 | Msa1169910 | -0.841553 | 4.432216e-58 | -8.615850e-47 |
| Msa0450480 | Msa1169910 | 0.827473 | 1.534249e-54 | -8.615850e-47 |
| Msa0479760 | Msa1169910 | -0.837296 | 5.652498e-57 | -8.615850e-47 |
| Msa0481030 | Msa1169910 | 0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa0481970 | Msa1169910 | 0.813597 | 2.361731e-51 | -8.615850e-47 |
| Msa1006840 | Msa1169910 | 0.810007 | 1.427584e-50 | -8.615850e-47 |
| Msa1012740 | Msa1169910 | 0.840276 | 9.587572e-58 | -8.615850e-47 |
| Msa1021520 | Msa1169910 | 0.837679 | 4.509330e-57 | -8.615850e-47 |
| Msa1044480 | Msa1169910 | 0.830861 | 2.313255e-55 | -8.615850e-47 |
| Msa1060260 | Msa1169910 | 0.832930 | 7.136624e-56 | -8.615850e-47 |
| Msa1072710 | Msa1169910 | 0.804593 | 2.005483e-49 | -8.615850e-47 |
| Msa1089450 | Msa1169910 | 0.824192 | 9.219173e-54 | -8.615850e-47 |
| Msa1105510 | Msa1169910 | 0.838422 | 2.903587e-57 | -8.615850e-47 |
| Msa0240900 | Msa1169910 | 0.818952 | 1.498550e-52 | -8.615850e-47 |
| Msa0241830 | Msa1169910 | 0.816253 | 6.083577e-52 | -8.615850e-47 |
| Msa0244970 | Msa1169910 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa0244980 | Msa1169910 | 0.814520 | 1.477771e-51 | -8.615850e-47 |
| Msa0245430 | Msa1169910 | 0.812799 | 3.534083e-51 | -8.615850e-47 |
| Msa0249310 | Msa1169910 | 0.834558 | 2.796682e-56 | -8.615850e-47 |
| Msa0249580 | Msa1169910 | 0.816847 | 4.478012e-52 | -8.615850e-47 |
| Msa0257490 | Msa1169910 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0258390 | Msa1169910 | 0.860125 | 2.568949e-63 | -8.615850e-47 |
| Msa0261170 | Msa1169910 | 0.820797 | 5.673179e-53 | -8.615850e-47 |
| Msa0270210 | Msa1169910 | 0.802966 | 4.366255e-49 | -8.615850e-47 |
| Msa0272010 | Msa1169910 | 0.809930 | 1.483005e-50 | -8.615850e-47 |
| Msa0275360 | Msa1169910 | 0.808770 | 2.630776e-50 | -8.615850e-47 |
| Msa0281530 | Msa1169910 | 0.845274 | 4.496918e-59 | -8.615850e-47 |
| Msa0283420 | Msa1169910 | 0.828941 | 6.796100e-55 | -8.615850e-47 |
| Msa0287790 | Msa1169910 | 0.810735 | 9.942513e-51 | -8.615850e-47 |
| Msa0288080 | Msa1169910 | 0.801600 | 8.340137e-49 | -8.615850e-47 |
| Msa0295460 | Msa1169910 | -0.839752 | 1.313193e-57 | -8.615850e-47 |
| Msa0296050 | Msa1169910 | -0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0296250 | Msa1169910 | 0.817459 | 3.261278e-52 | -8.615850e-47 |
| Msa0296790 | Msa1169910 | 0.805444 | 1.330936e-49 | -8.615850e-47 |
| Msa0297610 | Msa1169910 | 0.861183 | 1.227281e-63 | -8.615850e-47 |
| Msa0300280 | Msa1169910 | 0.807100 | 5.959544e-50 | -8.615850e-47 |
| Msa0315690 | Msa1169910 | 0.802306 | 5.973772e-49 | -8.615850e-47 |
| Msa0317970 | Msa1169910 | 0.821032 | 5.007617e-53 | -8.615850e-47 |
| Msa0320590 | Msa1169910 | 0.807094 | 5.978283e-50 | -8.615850e-47 |
| Msa0321690 | Msa1169910 | 0.825995 | 3.458590e-54 | -8.615850e-47 |
| Msa0322240 | Msa1169910 | 0.837307 | 5.614861e-57 | -8.615850e-47 |
| Msa0322900 | Msa1169910 | 0.807010 | 6.229237e-50 | -8.615850e-47 |
| Msa0326480 | Msa1169910 | 0.819919 | 9.018390e-53 | -8.615850e-47 |
| Msa0335730 | Msa1169910 | 0.817763 | 2.785463e-52 | -8.615850e-47 |
| Msa0337710 | Msa1169910 | 0.811886 | 5.594761e-51 | -8.615850e-47 |
| Msa0341840 | Msa1169910 | 0.805275 | 1.443854e-49 | -8.615850e-47 |
| Msa0343500 | Msa1169910 | 0.834912 | 2.278271e-56 | -8.615850e-47 |
| Msa0357900 | Msa1169910 | 0.852411 | 4.700234e-61 | -8.615850e-47 |
| Msa1123770 | Msa1169910 | 0.998339 | 2.859161e-262 | -8.615850e-47 |
| Msa1127590 | Msa1169910 | 0.809197 | 2.130984e-50 | -8.615850e-47 |
| Msa1128270 | Msa1169910 | 0.832204 | 1.080304e-55 | -8.615850e-47 |
| Msa1128280 | Msa1169910 | 0.811250 | 7.689795e-51 | -8.615850e-47 |
| Msa1128600 | Msa1169910 | 0.803013 | 4.267920e-49 | -8.615850e-47 |
| Msa1135890 | Msa1169910 | 0.825646 | 4.185065e-54 | -8.615850e-47 |
| Msa1143370 | Msa1169910 | -0.814321 | 1.635339e-51 | -8.615850e-47 |
| Msa1165270 | Msa1169910 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa1165780 | Msa1169910 | 0.814338 | 1.620731e-51 | -8.615850e-47 |
| Msa1169910 | Msa1174780 | 0.810517 | 1.108129e-50 | -8.615850e-47 |
| Msa1169910 | Msa1195300 | 0.818959 | 1.492634e-52 | -8.615850e-47 |
| Msa1169910 | Msa1209200 | 0.857251 | 1.854211e-62 | -8.615850e-47 |
| Msa1169910 | Msa1209850 | 0.867064 | 1.801532e-65 | -8.615850e-47 |
| Msa1169910 | Msa1216260 | 0.812838 | 3.465033e-51 | -8.615850e-47 |
| Msa1169910 | Msa1217580 | 0.809847 | 1.545316e-50 | -8.615850e-47 |
| Msa1169910 | Msa1218450 | 0.827260 | 1.726216e-54 | -8.615850e-47 |
| Msa1169910 | Msa1220900 | 0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa1169910 | Msa1225860 | -0.832478 | 9.237631e-56 | -8.615850e-47 |
| Msa1169910 | Msa1235610 | 0.814234 | 1.709254e-51 | -8.615850e-47 |
| Msa1169910 | Msa1236110 | -0.828488 | 8.741627e-55 | -8.615850e-47 |
| Msa1169910 | Msa1262890 | 0.806798 | 6.905185e-50 | -8.615850e-47 |
| Msa1169910 | Msa1264210 | 0.832616 | 8.541254e-56 | -8.615850e-47 |
| Msa1169910 | Msa1265590 | 0.831313 | 1.791373e-55 | -8.615850e-47 |
| Msa1169910 | Msa1265630 | 0.825261 | 5.162520e-54 | -8.615850e-47 |
| Msa1169910 | Msa1266190 | 0.828651 | 7.986243e-55 | -8.615850e-47 |
| Msa1169910 | Msa1275680 | 0.877088 | 8.314333e-69 | -8.615850e-47 |
| Msa1169910 | Msa1277260 | 0.839303 | 1.717329e-57 | -8.615850e-47 |
| Msa1169910 | Msa1298690 | 0.809731 | 1.637055e-50 | -8.615850e-47 |
| Msa1169910 | Msa1302380 | 0.844789 | 6.081246e-59 | -8.615850e-47 |
| Msa1169910 | Msa1303070 | 0.809956 | 1.464604e-50 | -8.615850e-47 |
| Msa1169910 | Msa1315890 | 0.847149 | 1.388525e-59 | -8.615850e-47 |
| Msa1169910 | Msa1316360 | 0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa1169910 | Msa1329730 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa1169910 | Msa1329750 | 0.804188 | 2.434809e-49 | -8.615850e-47 |
| Msa1169910 | Msa1330540 | -0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa1169910 | Msa1330560 | 0.829200 | 5.881627e-55 | -8.615850e-47 |
| Msa1169910 | Msa1332590 | 0.862337 | 5.444394e-64 | -8.615850e-47 |
| Msa1169910 | Msa1337850 | 0.801660 | 8.106253e-49 | -8.615850e-47 |
| Msa1169910 | Msa1340200 | 0.852196 | 5.409587e-61 | -8.615850e-47 |
| Msa1169910 | Msa1349520 | 0.815011 | 1.150194e-51 | -8.615850e-47 |
| Msa1169910 | Msa1351540 | 0.861216 | 1.199193e-63 | -8.615850e-47 |
| Msa1169910 | Msa1359400 | 0.809473 | 1.859461e-50 | -8.615850e-47 |
| Msa1169910 | Msa1366390 | 0.810779 | 9.726599e-51 | -8.615850e-47 |
| Msa1169910 | Msa1368360 | 0.804222 | 2.395431e-49 | -8.615850e-47 |
| Msa1169910 | Msa1370450 | 0.840166 | 1.024050e-57 | -8.615850e-47 |
| Msa1169910 | Msa1381350 | 0.823269 | 1.516759e-53 | -8.615850e-47 |
| Msa1169910 | Msa1383960 | 0.843821 | 1.106812e-58 | -8.615850e-47 |
| Msa1169910 | Msa1385720 | 0.999188 | 7.133557e-295 | -8.615850e-47 |
| Msa1169910 | Msa1394290 | 0.801722 | 7.873305e-49 | -8.615850e-47 |
| Msa1169910 | Msa1406070 | 0.834148 | 3.542912e-56 | -8.615850e-47 |
| Msa1169910 | Msa1411970 | 0.856131 | 3.958238e-62 | -8.615850e-47 |
| Msa1169910 | Msa1413380 | 0.823260 | 1.523967e-53 | -8.615850e-47 |
| Msa1169910 | Msa1434090 | 0.991339 | 3.985122e-187 | -8.615850e-47 |
| Msa1169910 | Msa1435390 | 0.828255 | 9.949670e-55 | -8.615850e-47 |
| Msa1169910 | Msa1437270 | 0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa1169910 | Msa1440310 | 0.815791 | 7.715450e-52 | -8.615850e-47 |
| Msa1169910 | Msa1440930 | 0.827578 | 1.448145e-54 | -8.615850e-47 |
| Msa1169910 | Msa1450720 | 0.806306 | 8.771816e-50 | -8.615850e-47 |
| Msa1169910 | Msa1454680 | 0.817303 | 3.536293e-52 | -8.615850e-47 |
| Msa1169910 | Msa1464090 | 0.838667 | 2.509750e-57 | -8.615850e-47 |
| Msa0485510 | Msa1169910 | 0.810496 | 1.119992e-50 | -8.615850e-47 |
| Msa0500470 | Msa1169910 | 0.821788 | 3.351219e-53 | -8.615850e-47 |
| Msa0523430 | Msa1169910 | -0.832274 | 1.037752e-55 | -8.615850e-47 |
| Msa0531230 | Msa1169910 | 0.863566 | 2.272681e-64 | -8.615850e-47 |
| Msa0542490 | Msa1169910 | 0.840301 | 9.443391e-58 | -8.615850e-47 |
| Msa0554290 | Msa1169910 | 0.838708 | 2.448887e-57 | -8.615850e-47 |
| Msa0554920 | Msa1169910 | 0.804861 | 1.763063e-49 | -8.615850e-47 |
| Msa0560460 | Msa1169910 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0576120 | Msa1169910 | -0.810943 | 8.964433e-51 | -8.615850e-47 |
| Msa0578140 | Msa1169910 | 0.813691 | 2.251655e-51 | -8.615850e-47 |
| Msa0581110 | Msa1169910 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0581280 | Msa1169910 | 0.872011 | 4.413385e-67 | -8.615850e-47 |
| Msa0583360 | Msa1169910 | -0.830661 | 2.589981e-55 | -8.615850e-47 |
| Msa0586420 | Msa1169910 | 0.840308 | 9.403400e-58 | -8.615850e-47 |
| Msa0586790 | Msa1169910 | 0.811724 | 6.067832e-51 | -8.615850e-47 |
| Msa0892640 | Msa1169910 | 0.872520 | 2.985361e-67 | -8.615850e-47 |
| Msa0933760 | Msa1169910 | 0.828112 | 1.077268e-54 | -8.615850e-47 |
| Msa0934140 | Msa1169910 | 0.837982 | 3.767966e-57 | -8.615850e-47 |
| Msa0944200 | Msa1169910 | 0.803605 | 3.218345e-49 | -8.615850e-47 |
| Msa0958000 | Msa1169910 | 0.836894 | 7.160399e-57 | -8.615850e-47 |
| Msa0959520 | Msa1169910 | 0.804604 | 1.994592e-49 | -8.615850e-47 |
| Msa0971650 | Msa1169910 | 0.813279 | 2.774461e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169910 | MtrunA17_Chr7g0263091 | 98.355 | 608 | 10 | 0 | 1 | 608 | 2 | 609 | 0.0 | 1239 |
| Msa1169910 | MtrunA17_Chr8g0337791 | 69.722 | 611 | 137 | 8 | 1 | 608 | 1 | 566 | 0.0 | 841 |
| Msa1169910 | MtrunA17_Chr6g0458851 | 65.556 | 90 | 26 | 2 | 206 | 295 | 1 | 85 | 3.21e-30 | 114 |
| Msa1169910 | MtrunA17_Chr6g0458691 | 71.250 | 80 | 23 | 0 | 38 | 117 | 20 | 99 | 3.35e-30 | 115 |
| Msa1169910 | MtrunA17_Chr6g0458691 | 65.306 | 49 | 17 | 0 | 415 | 463 | 97 | 145 | 1.60e-17 | 79.7 |
| Msa1169910 | MtrunA17_Chr6g0458821 | 39.873 | 158 | 50 | 4 | 433 | 587 | 24 | 139 | 4.56e-25 | 101 |
| Msa1169910 | MtrunA17_Chr6g0458761 | 40.268 | 149 | 46 | 3 | 433 | 580 | 24 | 130 | 9.74e-25 | 100 |
| Msa1169910 | MtrunA17_Chr6g0458631 | 57.831 | 83 | 31 | 1 | 35 | 117 | 6 | 84 | 7.91e-24 | 98.6 |
| Msa1169910 | MtrunA17_Chr6g0458631 | 70.455 | 44 | 13 | 0 | 437 | 480 | 76 | 119 | 4.88e-14 | 70.5 |
| Msa1169910 | MtrunA17_Chr6g0458741 | 70.455 | 44 | 13 | 0 | 437 | 480 | 15 | 58 | 1.12e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169910 | AT5G14520.1 | 59.835 | 605 | 224 | 4 | 1 | 604 | 1 | 587 | 0.0 | 716 |
Find 142 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTTGCAAGTGTTTA+AGG | 0.077657 | 7_4:+63019568 | None:intergenic |
| AAGTGGAAGGACTTCCTTTC+TGG | 0.157417 | 7_4:+63019545 | None:intergenic |
| AAAACATTTGTATCTGTTAA+AGG | 0.196641 | 7_4:-63022220 | Msa1169910:CDS |
| TGTAGAAAGTTTAGCATAGT+AGG | 0.252591 | 7_4:+63022023 | None:intergenic |
| CTTATCCTTTCCTTATATAT+AGG | 0.271329 | 7_4:-63018499 | Msa1169910:three_prime_UTR |
| CGATCCTCGCTTGGAGGCCT+TGG | 0.273183 | 7_4:-63021680 | Msa1169910:CDS |
| GAATTGATGCAGCCTCTTCT+TGG | 0.273854 | 7_4:-63021757 | Msa1169910:intron |
| GCCATATCATTCTGTGTTAT+AGG | 0.288059 | 7_4:-63018763 | Msa1169910:three_prime_UTR |
| ATCCTATCTATCTTGGGTTT+AGG | 0.307336 | 7_4:+63022681 | None:intergenic |
| GCATTGTCAAGATATTTAAA+TGG | 0.311917 | 7_4:-63021548 | Msa1169910:CDS |
| GGGAGGATACTTCAAATTAA+TGG | 0.317994 | 7_4:+63021708 | None:intergenic |
| AAGGAAGTCCTTCCACTTCC+AGG | 0.320847 | 7_4:-63019540 | Msa1169910:CDS |
| CATTTCTTCAGATCGTTGAT+AGG | 0.328002 | 7_4:-63020765 | Msa1169910:intron |
| AAAACGGTATCCTATATATA+AGG | 0.339948 | 7_4:+63018489 | None:intergenic |
| AATTTGTTCCCTACACCTTC+AGG | 0.340869 | 7_4:+63018565 | None:intergenic |
| GGAAGATCCTCAAAATCTTC+TGG | 0.343027 | 7_4:-63019502 | Msa1169910:CDS |
| TCGTATTCAGGGGAAGAAAA+AGG | 0.346079 | 7_4:-63023081 | Msa1169910:intron |
| ACGGATTATCCTATCTATCT+TGG | 0.349681 | 7_4:+63022674 | None:intergenic |
| TTTGAAGCTGCTTGAGTGCT+TGG | 0.355501 | 7_4:+63023027 | None:intergenic |
| AACTCCTCATTCACTGCAAC+AGG | 0.362433 | 7_4:-63022069 | Msa1169910:CDS |
| AAAACATTGAACGTGCAAAT+AGG | 0.364609 | 7_4:-63022719 | Msa1169910:CDS |
| CGGATTATCCTATCTATCTT+GGG | 0.365112 | 7_4:+63022675 | None:intergenic |
| AGTGCACCTGGTTCATTAGA+AGG | 0.367300 | 7_4:+63021389 | None:intergenic |
| CACGCAGTCACGAGATTGTT+AGG | 0.367719 | 7_4:+63023493 | None:intergenic |
| TGTTGATGCACTTGGAGAAT+TGG | 0.369050 | 7_4:-63022634 | Msa1169910:CDS |
| CGCTTGGAGGCCTTGGCAGC+AGG | 0.371399 | 7_4:-63021673 | Msa1169910:intron |
| GTCACGAGATTGTTAGGTTA+GGG | 0.383305 | 7_4:+63023499 | None:intergenic |
| AGAATGATATGGCATATAAC+TGG | 0.394324 | 7_4:+63018773 | None:intergenic |
| GGTCTGTGCCCCATCTTGCT+TGG | 0.395071 | 7_4:+63021460 | None:intergenic |
| TTGAAGCTGCTTGAGTGCTT+GGG | 0.401438 | 7_4:+63023028 | None:intergenic |
| AGTCACGAGATTGTTAGGTT+AGG | 0.409386 | 7_4:+63023498 | None:intergenic |
| ATATATACCTTCGACATTTG+TGG | 0.409570 | 7_4:+63022535 | None:intergenic |
| CCGAGATTTGTTGATGCACT+TGG | 0.410666 | 7_4:-63022642 | Msa1169910:CDS |
| AGCAGCTTGCAAGTGTTTAA+GGG | 0.412911 | 7_4:+63019569 | None:intergenic |
| CTGCTTGAGTGCTTGGGTCC+TGG | 0.413989 | 7_4:+63023034 | None:intergenic |
| TCAGCAAACGGAACCTGAAA+AGG | 0.419969 | 7_4:+63022994 | None:intergenic |
| GCTTCAGAATTCAGTTTAGC+AGG | 0.421503 | 7_4:+63021515 | None:intergenic |
| TCCTATAACACAGAATGATA+TGG | 0.423749 | 7_4:+63018762 | None:intergenic |
| GTAGAAAGTTTAGCATAGTA+GGG | 0.424316 | 7_4:+63022024 | None:intergenic |
| TGTTAAAGGCATATACTATC+AGG | 0.426932 | 7_4:-63022206 | Msa1169910:intron |
| TGACCAGAGCATTACTCATC+AGG | 0.431073 | 7_4:-63020852 | Msa1169910:intron |
| CTCAGAATCAAAGGAGTTGA+AGG | 0.450438 | 7_4:-63018816 | Msa1169910:exon |
| TCCCATCCTCGATCCTCGCT+TGG | 0.450758 | 7_4:-63021689 | Msa1169910:CDS |
| CACCTAAACCCAAGATAGAT+AGG | 0.452146 | 7_4:-63022683 | Msa1169910:CDS |
| CATCCTCGATCCTCGCTTGG+AGG | 0.453702 | 7_4:-63021686 | Msa1169910:CDS |
| CCAAGTGCATCAACAAATCT+CGG | 0.453864 | 7_4:+63022642 | None:intergenic |
| AACATGATACTATCATTAAA+CGG | 0.458418 | 7_4:-63018858 | Msa1169910:CDS |
| AGAATTCAGTTTAGCAGGTC+GGG | 0.461342 | 7_4:+63021520 | None:intergenic |
| TCAAATTAATGGAATGATAG+AGG | 0.462893 | 7_4:+63021719 | None:intergenic |
| GGAGTTGAAGAAAGAACTAA+AGG | 0.466055 | 7_4:-63019301 | Msa1169910:CDS |
| CTCTGGTCAGATTCTGCAAA+GGG | 0.469526 | 7_4:+63020866 | None:intergenic |
| CTTGCAAGCTGCTGCCAGAA+AGG | 0.471722 | 7_4:-63019559 | Msa1169910:CDS |
| CAAATAGAGTCCAAGCAAGA+TGG | 0.474285 | 7_4:-63021470 | Msa1169910:CDS |
| CAGCAAACGGAACCTGAAAA+GGG | 0.476889 | 7_4:+63022995 | None:intergenic |
| GTTCAAGCTAATACTGATGA+TGG | 0.483361 | 7_4:-63019195 | Msa1169910:CDS |
| CAGTTTCATGGGAGGGAGAA+GGG | 0.489826 | 7_4:-63020892 | Msa1169910:CDS |
| GGTGAAACATACACTTCAGC+AGG | 0.493983 | 7_4:-63019279 | Msa1169910:CDS |
| AGAATATGTTCAACCACAAT+GGG | 0.495352 | 7_4:-63020713 | Msa1169910:CDS |
| ATTTCTTCAGATCGTTGATA+GGG | 0.501272 | 7_4:-63020764 | Msa1169910:intron |
| TCCTCAAAATCTTCTGGCTG+AGG | 0.507721 | 7_4:-63019496 | Msa1169910:CDS |
| GAAGCTACTTGAAGCTATGC+AGG | 0.510853 | 7_4:-63019133 | Msa1169910:intron |
| TGAAGGATTCTGCATTCTCA+AGG | 0.513113 | 7_4:-63018799 | Msa1169910:three_prime_UTR |
| TACTGATGATGGCGCTGAGA+TGG | 0.513305 | 7_4:-63019184 | Msa1169910:CDS |
| ACAGTTTCATGGGAGGGAGA+AGG | 0.517134 | 7_4:-63020893 | Msa1169910:CDS |
| GTTTGTGCAGGCTGAAGTTG+AGG | 0.517949 | 7_4:-63022111 | Msa1169910:intron |
| CCTTTCGTTGACTATGACGA+AGG | 0.522226 | 7_4:-63019618 | Msa1169910:CDS |
| AAAGGCGACAAGTGCGGTGG+AGG | 0.522970 | 7_4:+63019636 | None:intergenic |
| CTCCAAGCGAGGATCGAGGA+TGG | 0.528155 | 7_4:+63021687 | None:intergenic |
| CAGAATTCAGTTTAGCAGGT+CGG | 0.528529 | 7_4:+63021519 | None:intergenic |
| TCCCTACACCTTCAGGTGTG+TGG | 0.528819 | 7_4:+63018572 | None:intergenic |
| TTTGTGCAGGCTGAAGTTGA+GGG | 0.530560 | 7_4:-63022110 | Msa1169910:intron |
| GCCTTTGGTTGAAATACATA+GGG | 0.531832 | 7_4:-63022787 | Msa1169910:CDS |
| GCCCTATGTATTTCAACCAA+AGG | 0.532381 | 7_4:+63022786 | None:intergenic |
| GAGAATATGTTCAACCACAA+TGG | 0.535969 | 7_4:-63020714 | Msa1169910:CDS |
| AAACTTTCTACAACTCTATG+AGG | 0.536109 | 7_4:-63022012 | Msa1169910:intron |
| GCTGCCAAGGCCTCCAAGCG+AGG | 0.538415 | 7_4:+63021676 | None:intergenic |
| TTAAGGGTCTTTGCATACTC+CGG | 0.541818 | 7_4:+63019585 | None:intergenic |
| AAATAAATCAAATCTCAAAA+CGG | 0.542123 | 7_4:+63018473 | None:intergenic |
| AAATAGAGTCCAAGCAAGAT+GGG | 0.543002 | 7_4:-63021469 | Msa1169910:CDS |
| TCCAAGCGAGGATCGAGGAT+GGG | 0.545604 | 7_4:+63021688 | None:intergenic |
| TAGATGAAGCTCAGAATCAA+AGG | 0.545642 | 7_4:-63018825 | Msa1169910:CDS |
| CAAAACAGTACCTGCTGCCA+AGG | 0.546500 | 7_4:+63021663 | None:intergenic |
| CAAATCTCGGGTACCTCTGA+CGG | 0.547460 | 7_4:+63022655 | None:intergenic |
| GGTGGTACAGTTTCATGGGA+GGG | 0.549135 | 7_4:-63020899 | Msa1169910:CDS |
| ACAAGCTGCATTAGTGCACC+TGG | 0.550380 | 7_4:+63021377 | None:intergenic |
| TTTGCTTTCAGTCGCAGGTA+CGG | 0.552774 | 7_4:+63022578 | None:intergenic |
| TGGTGGTACAGTTTCATGGG+AGG | 0.552915 | 7_4:-63020900 | Msa1169910:CDS |
| CTATATATAAGGAAAGGATA+AGG | 0.553916 | 7_4:+63018500 | None:intergenic |
| GTTCTTTCTTCAACTCCTCA+CGG | 0.554903 | 7_4:+63019307 | None:intergenic |
| GCCACACACCTGAAGGTGTA+GGG | 0.556228 | 7_4:-63018573 | Msa1169910:three_prime_UTR |
| TTTCAGCACCTGGAAGTGGA+AGG | 0.558041 | 7_4:+63019532 | None:intergenic |
| ACAACCTGTTGCAGTGAATG+AGG | 0.559945 | 7_4:+63022065 | None:intergenic |
| GTTGAACATATTCTCTTGAG+AGG | 0.562695 | 7_4:+63020722 | None:intergenic |
| CAAGTGCATCAACAAATCTC+GGG | 0.564221 | 7_4:+63022643 | None:intergenic |
| TGACGAAGGAGCATATGTTC+CGG | 0.565040 | 7_4:-63019604 | Msa1169910:CDS |
| ACGGCTGTTGTGAGAAGAAG+AGG | 0.565644 | 7_4:+63023459 | None:intergenic |
| TTTAATTATTCAGGCACCAA+GGG | 0.565988 | 7_4:-63020951 | Msa1169910:intron |
| AGTTTCATGGGAGGGAGAAG+GGG | 0.566307 | 7_4:-63020891 | Msa1169910:CDS |
| AAACCTGATGAGTAATGCTC+TGG | 0.568715 | 7_4:+63020849 | None:intergenic |
| GTTCTAGATTGGCGCATGAA+TGG | 0.569979 | 7_4:-63022276 | Msa1169910:intron |
| GAGTTGAAGAAAGAACTAAA+GGG | 0.578009 | 7_4:-63019300 | Msa1169910:CDS |
| TTGAACGTGCAAATAGGCTA+CGG | 0.578493 | 7_4:-63022713 | Msa1169910:CDS |
| GGTCCTGGTGACAAACTTAG+CGG | 0.588935 | 7_4:+63023049 | None:intergenic |
| AGCCTTTGGTTGAAATACAT+AGG | 0.589241 | 7_4:-63022788 | Msa1169910:CDS |
| CCTCAAAATCTTCTGGCTGA+GGG | 0.590032 | 7_4:-63019495 | Msa1169910:CDS |
| ACTGATGATGGCGCTGAGAT+GGG | 0.591885 | 7_4:-63019183 | Msa1169910:CDS |
| AGTTGCAGGCGAAGGTGAAG+AGG | 0.592188 | 7_4:-63021348 | Msa1169910:CDS |
| GGTATCCTATATATAAGGAA+AGG | 0.592698 | 7_4:+63018494 | None:intergenic |
| CAACTTCCTTCTAATGAACC+AGG | 0.593856 | 7_4:-63021395 | Msa1169910:CDS |
| GAAACTGTACCACCAAAAGC+AGG | 0.601785 | 7_4:+63020908 | None:intergenic |
| GCCGTCAGCAGCTTCAGCAA+TGG | 0.602797 | 7_4:-63023441 | Msa1169910:exon |
| TGAACGTGCAAATAGGCTAC+GGG | 0.608457 | 7_4:-63022712 | Msa1169910:CDS |
| TTTGAAAGGTGTAACTCCGA+GGG | 0.612090 | 7_4:-63022883 | Msa1169910:CDS |
| ACCATTGCTGAAGCTGCTGA+CGG | 0.614262 | 7_4:+63023440 | None:intergenic |
| GTTTAATTATTCAGGCACCA+AGG | 0.616940 | 7_4:-63020952 | Msa1169910:intron |
| CCTTCGTCATAGTCAACGAA+AGG | 0.622674 | 7_4:+63019618 | None:intergenic |
| AAATTGACAAATCCAAGAAG+AGG | 0.622926 | 7_4:+63021745 | None:intergenic |
| AAGCGAGGATCGAGGATGGG+AGG | 0.624521 | 7_4:+63021691 | None:intergenic |
| ACTGCAACAGGTTGTGTCTG+AGG | 0.625144 | 7_4:-63022057 | Msa1169910:CDS |
| GCTCTGGTCAGATTCTGCAA+AGG | 0.627546 | 7_4:+63020865 | None:intergenic |
| TGCCACACACCTGAAGGTGT+AGG | 0.629792 | 7_4:-63018574 | Msa1169910:three_prime_UTR |
| ACACAGTCAAATACCCATTG+TGG | 0.637820 | 7_4:+63020700 | None:intergenic |
| ACGAAAGGCGACAAGTGCGG+TGG | 0.638472 | 7_4:+63019633 | None:intergenic |
| AGGCCTCCAAGCGAGGATCG+AGG | 0.639249 | 7_4:+63021683 | None:intergenic |
| ATGCCGCTAAGTTTGTCACC+AGG | 0.639817 | 7_4:-63023052 | Msa1169910:CDS |
| TCTACCGCAGTCATTCAGAC+TGG | 0.643448 | 7_4:-63019234 | Msa1169910:CDS |
| AGCTTGTCCACAAATGTCGA+AGG | 0.645271 | 7_4:-63022542 | Msa1169910:intron |
| ATCGTTGATAGGGAATCTCA+AGG | 0.645647 | 7_4:-63020754 | Msa1169910:CDS |
| AAAAGCTAATATCTTTGACA+TGG | 0.648919 | 7_4:+63022820 | None:intergenic |
| TATTTGACTGTGTGAATGCA+CGG | 0.649353 | 7_4:-63020690 | Msa1169910:CDS |
| GTATTTCAACCAAAGGCTCG+TGG | 0.653492 | 7_4:+63022793 | None:intergenic |
| ATTGGATGACTGCCTTACAA+TGG | 0.657253 | 7_4:-63022616 | Msa1169910:CDS |
| TCGTGCAGCTGCAAATGAAG+CGG | 0.657904 | 7_4:-63019463 | Msa1169910:CDS |
| TAGATAGGATAATCCGTCAG+AGG | 0.658499 | 7_4:-63022668 | Msa1169910:CDS |
| TCAACGAAAGGCGACAAGTG+CGG | 0.660001 | 7_4:+63019630 | None:intergenic |
| AATAGAGTCCAAGCAAGATG+GGG | 0.666787 | 7_4:-63021468 | Msa1169910:CDS |
| GCAGGAGCAGCGATTCCGTG+AGG | 0.667655 | 7_4:-63019322 | Msa1169910:CDS |
| AGCAAACGGAACCTGAAAAG+GGG | 0.669628 | 7_4:+63022996 | None:intergenic |
| CAAAATCTTCTTGAGCAGAG+AGG | 0.675575 | 7_4:-63021279 | Msa1169910:intron |
| TTGAGGGTCAGAAAATAACA+TGG | 0.681160 | 7_4:-63022094 | Msa1169910:CDS |
| GTGAAACATACACTTCAGCA+GGG | 0.696239 | 7_4:-63019278 | Msa1169910:CDS |
| TTCACCAGTCTGAATGACTG+CGG | 0.726671 | 7_4:+63019230 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATTAACATAATCAA+TGG | + | chr7_4:63019823-63019842 | None:intergenic | 10.0% |
| !! | TAATATGTCATAAAGAATTT+AGG | - | chr7_4:63019504-63019523 | Msa1169910:CDS | 15.0% |
| !! | TGTAATTGAATAACTAAATT+TGG | + | chr7_4:63020176-63020195 | None:intergenic | 15.0% |
| !! | ATGTTTAAGAAATTAGTATA+TGG | + | chr7_4:63020207-63020226 | None:intergenic | 15.0% |
| !!! | TATCTTAATTTTTAGAATGA+AGG | - | chr7_4:63021638-63021657 | Msa1169910:intron | 15.0% |
| !!! | ATCTTAATTTTTAGAATGAA+GGG | - | chr7_4:63021639-63021658 | Msa1169910:intron | 15.0% |
| !! | ATCGAATATATTTATACAAA+GGG | + | chr7_4:63021859-63021878 | None:intergenic | 15.0% |
| !!! | GATAAAATCAAAATTTTCTT+TGG | + | chr7_4:63023354-63023373 | None:intergenic | 15.0% |
| !! | GAAACATAAAAATATGTGAA+AGG | + | chr7_4:63018629-63018648 | None:intergenic | 20.0% |
| !!! | TGTTTTATTCGTTTATCTTT+CGG | - | chr7_4:63018660-63018679 | Msa1169910:three_prime_UTR | 20.0% |
| !! | GAAAATTTGATTCTGATATT+CGG | - | chr7_4:63019058-63019077 | Msa1169910:intron | 20.0% |
| !! | AAAATTTGATTCTGATATTC+GGG | - | chr7_4:63019059-63019078 | Msa1169910:intron | 20.0% |
| !!! | TATTCGGGTTTATAAATTTT+AGG | - | chr7_4:63019074-63019093 | Msa1169910:intron | 20.0% |
| !! | CTTGGAATTATATTAACTTT+AGG | - | chr7_4:63019480-63019499 | Msa1169910:CDS | 20.0% |
| !!! | TTAATTTGAAAATAACGACT+AGG | - | chr7_4:63019544-63019563 | Msa1169910:CDS | 20.0% |
| !! | TTATATTAGTAACATCTCAT+TGG | - | chr7_4:63019613-63019632 | Msa1169910:CDS | 20.0% |
| !!! | GTTGCACTTTTTTTTTAAAA+AGG | + | chr7_4:63019648-63019667 | None:intergenic | 20.0% |
| !! | AAAACATTTGTATCTGTTAA+AGG | - | chr7_4:63019771-63019790 | Msa1169910:intron | 20.0% |
| !! | CGCTTAATTTAAATATGATT+TGG | + | chr7_4:63020020-63020039 | None:intergenic | 20.0% |
| !!! | TAGTTCAGATTTTTCATTTT+GGG | + | chr7_4:63020555-63020574 | None:intergenic | 20.0% |
| !!! | TTAGTTCAGATTTTTCATTT+TGG | + | chr7_4:63020556-63020575 | None:intergenic | 20.0% |
| !!! | ACATAGTTTTTTTTTTGCTA+AGG | - | chr7_4:63020936-63020955 | Msa1169910:CDS | 20.0% |
| !!! | GTTTAAACTTGCATTTATTT+TGG | - | chr7_4:63020988-63021007 | Msa1169910:intron | 20.0% |
| !! | CATCGAATATATTTATACAA+AGG | + | chr7_4:63021860-63021879 | None:intergenic | 20.0% |
| !! | TAATTAATACTACAATGTCT+TGG | + | chr7_4:63021898-63021917 | None:intergenic | 20.0% |
| !! | AGAAAAATACTACATTATCT+CGG | + | chr7_4:63023041-63023060 | None:intergenic | 20.0% |
| !!! | ATAATGTAGTATTTTTCTGT+TGG | - | chr7_4:63023043-63023062 | Msa1169910:CDS | 20.0% |
| !! | AACATGATACTATCATTAAA+CGG | - | chr7_4:63023133-63023152 | Msa1169910:intron | 20.0% |
| !!! | AACTAGTTTTCTTTTATTGT+TGG | - | chr7_4:63023268-63023287 | Msa1169910:intron | 20.0% |
| !!! | TCTTTCGGTATTTTAATTGA+TGG | - | chr7_4:63018675-63018694 | Msa1169910:three_prime_UTR | 25.0% |
| ! | GCGCTAATTCATATAAATTA+AGG | + | chr7_4:63018733-63018752 | None:intergenic | 25.0% |
| ! | AAAATAGAATTGTCAGCAAA+CGG | + | chr7_4:63019012-63019031 | None:intergenic | 25.0% |
| ! | AAAAGCTAATATCTTTGACA+TGG | + | chr7_4:63019174-63019193 | None:intergenic | 25.0% |
| ! | TGAAAGCAAAAAAATTGATG+TGG | - | chr7_4:63019426-63019445 | Msa1169910:intron | 25.0% |
| ! | AATTAAAGATTGAAGCACAA+AGG | + | chr7_4:63019530-63019549 | None:intergenic | 25.0% |
| ! | AAGTATTATTGCAGCATAAT+AGG | + | chr7_4:63019670-63019689 | None:intergenic | 25.0% |
| !! | ATTTATTATGTTGTTTGTGC+AGG | - | chr7_4:63019868-63019887 | Msa1169910:intron | 25.0% |
| ! | GATCTATAATCCTATTACTT+TGG | + | chr7_4:63020081-63020100 | None:intergenic | 25.0% |
| ! | TCAAATTAATGGAATGATAG+AGG | + | chr7_4:63020275-63020294 | None:intergenic | 25.0% |
| ! | ATTGATCAGAAGATAATTTC+AGG | + | chr7_4:63020395-63020414 | None:intergenic | 25.0% |
| ! | GCATTGTCAAGATATTTAAA+TGG | - | chr7_4:63020443-63020462 | Msa1169910:intron | 25.0% |
| ! | AATTTACACAAACTCTAACT+CGG | + | chr7_4:63020757-63020776 | None:intergenic | 25.0% |
| ! | AATTGTGAAGAGTTCATATA+TGG | - | chr7_4:63020797-63020816 | Msa1169910:intron | 25.0% |
| !!! | TGGACTAGTGATATTATAAA+TGG | - | chr7_4:63020817-63020836 | Msa1169910:intron | 25.0% |
| !! | GGACTAGTGATATTATAAAT+GGG | - | chr7_4:63020818-63020837 | Msa1169910:intron | 25.0% |
| ! | CCTGAATAATTAAACCAAAA+CGG | + | chr7_4:63021034-63021053 | None:intergenic | 25.0% |
| ! | AATAGTTGAGCAAACATTAA+AGG | + | chr7_4:63021201-63021220 | None:intergenic | 25.0% |
| !!! | CCAACAGAAAATTATTTTGT+GGG | - | chr7_4:63021333-63021352 | Msa1169910:CDS | 25.0% |
| ! | TATACAATAGAGATCATAGT+CGG | + | chr7_4:63021391-63021410 | None:intergenic | 25.0% |
| ! | AACAATGTTGTCAAAGAAAT+GGG | + | chr7_4:63021421-63021440 | None:intergenic | 25.0% |
| ! | TAACAATGTTGTCAAAGAAA+TGG | + | chr7_4:63021422-63021441 | None:intergenic | 25.0% |
| ! | ATTCTTATTAGTTGTGATCT+TGG | - | chr7_4:63021603-63021622 | Msa1169910:intron | 25.0% |
| !!! | AATTTGTTGCTAATTAACTG+CGG | - | chr7_4:63021735-63021754 | Msa1169910:CDS | 25.0% |
| ! | GACATTGTAGTATTAATTAG+AGG | - | chr7_4:63021899-63021918 | Msa1169910:intron | 25.0% |
| ! | TTTGAAGAAAGAGTAATGAA+CGG | - | chr7_4:63021926-63021945 | Msa1169910:intron | 25.0% |
| !! | GTATAGTAATTCCTTTTCAA+TGG | - | chr7_4:63022627-63022646 | Msa1169910:CDS | 25.0% |
| !!! | ATGTTCTTTCAGTTTTGTAA+CGG | - | chr7_4:63023317-63023336 | Msa1169910:intron | 25.0% |
| !! | TTTTTGATACATTTGGAGAA+AGG | - | chr7_4:63023388-63023407 | Msa1169910:intron | 25.0% |
| ! | CTATATATAAGGAAAGGATA+AGG | + | chr7_4:63023494-63023513 | None:intergenic | 25.0% |
| ! | CTTATCCTTTCCTTATATAT+AGG | - | chr7_4:63023492-63023511 | Msa1169910:five_prime_UTR | 25.0% |
| ! | AAAACGGTATCCTATATATA+AGG | + | chr7_4:63023505-63023524 | None:intergenic | 25.0% |
| AATTAGCGCAATAAAAAGAG+CGG | - | chr7_4:63018744-63018763 | Msa1169910:three_prime_UTR | 30.0% | |
| !! | CAATAAAAAGAGCGGATTAA+CGG | - | chr7_4:63018752-63018771 | Msa1169910:three_prime_UTR | 30.0% |
| CATCTATCTCAATTTACTCT+CGG | + | chr7_4:63018780-63018799 | None:intergenic | 30.0% | |
| !! | TTTCCCTTGAACTTTTTCTT+CGG | + | chr7_4:63019136-63019155 | None:intergenic | 30.0% |
| ! | TTCAATGTTTTTCTTTGCCT+CGG | + | chr7_4:63019263-63019282 | None:intergenic | 30.0% |
| AAAACATTGAACGTGCAAAT+AGG | - | chr7_4:63019272-63019291 | Msa1169910:CDS | 30.0% | |
| CAAAAAGATGTACCATTGTA+AGG | + | chr7_4:63019390-63019409 | None:intergenic | 30.0% | |
| ATATATACCTTCGACATTTG+TGG | + | chr7_4:63019459-63019478 | None:intergenic | 30.0% | |
| ! | ATGTCGAAGGTATATATACT+TGG | - | chr7_4:63019462-63019481 | Msa1169910:CDS | 30.0% |
| ! | TGTTAAAGGCATATACTATC+AGG | - | chr7_4:63019785-63019804 | Msa1169910:intron | 30.0% |
| GTAGAAAGTTTAGCATAGTA+GGG | + | chr7_4:63019970-63019989 | None:intergenic | 30.0% | |
| TGTAGAAAGTTTAGCATAGT+AGG | + | chr7_4:63019971-63019990 | None:intergenic | 30.0% | |
| AAACTTTCTACAACTCTATG+AGG | - | chr7_4:63019979-63019998 | Msa1169910:intron | 30.0% | |
| TCCATATCATCCAAAGTAAT+AGG | - | chr7_4:63020068-63020087 | Msa1169910:intron | 30.0% | |
| TCCTATTACTTTGGATGATA+TGG | + | chr7_4:63020072-63020091 | None:intergenic | 30.0% | |
| AAATTGACAAATCCAAGAAG+AGG | + | chr7_4:63020249-63020268 | None:intergenic | 30.0% | |
| ! | GCAATTCAAGTTTATAAAGC+TGG | + | chr7_4:63020365-63020384 | None:intergenic | 30.0% |
| !!! | CCGTTTTGGTTTAATTATTC+AGG | - | chr7_4:63021031-63021050 | Msa1169910:intron | 30.0% |
| TTTAATTATTCAGGCACCAA+GGG | - | chr7_4:63021040-63021059 | Msa1169910:intron | 30.0% | |
| !!! | CTTTTTGTTATTCCTGCTTT+TGG | - | chr7_4:63021071-63021090 | Msa1169910:intron | 30.0% |
| ATTTCTTCAGATCGTTGATA+GGG | - | chr7_4:63021227-63021246 | Msa1169910:intron | 30.0% | |
| AGAATATGTTCAACCACAAT+GGG | - | chr7_4:63021278-63021297 | Msa1169910:intron | 30.0% | |
| !! | GCCAACAGAAAATTATTTTG+TGG | - | chr7_4:63021332-63021351 | Msa1169910:CDS | 30.0% |
| ! | CCCACAAAATAATTTTCTGT+TGG | + | chr7_4:63021336-63021355 | None:intergenic | 30.0% |
| !! | CAGAAAATTATTTTGTGGGA+AGG | - | chr7_4:63021337-63021356 | Msa1169910:CDS | 30.0% |
| AACTTCTAATTCGTTTGTGT+TGG | - | chr7_4:63021361-63021380 | Msa1169910:CDS | 30.0% | |
| ! | GTATTATCTGTGCCTATTTT+AGG | - | chr7_4:63021497-63021516 | Msa1169910:CDS | 30.0% |
| !!! | AAAGCATTTTTGGTTTCGTT+AGG | - | chr7_4:63021580-63021599 | Msa1169910:intron | 30.0% |
| TTAGAATGAAGGGTTCTTAT+TGG | - | chr7_4:63021649-63021668 | Msa1169910:intron | 30.0% | |
| !! | TTAACATGTGTGCTTTTTGT+TGG | + | chr7_4:63021793-63021812 | None:intergenic | 30.0% |
| CACATGTTAAGAAAAGTTGT+TGG | - | chr7_4:63021803-63021822 | Msa1169910:intron | 30.0% | |
| TTGAAGAAAGAGTAATGAAC+GGG | - | chr7_4:63021927-63021946 | Msa1169910:intron | 30.0% | |
| AATTGTGTGTCCTAAATACA+CGG | + | chr7_4:63021972-63021991 | None:intergenic | 30.0% | |
| ! | AGGACACACAATTTTGTAAA+CGG | - | chr7_4:63021979-63021998 | Msa1169910:intron | 30.0% |
| !! | AATTTTGTAAACGGTCTTGT+AGG | - | chr7_4:63021988-63022007 | Msa1169910:intron | 30.0% |
| !! | ATTTTGTAAACGGTCTTGTA+GGG | - | chr7_4:63021989-63022008 | Msa1169910:intron | 30.0% |
| GGTCTTAAATTAGAGTCAAA+GGG | - | chr7_4:63022010-63022029 | Msa1169910:intron | 30.0% | |
| AGATACGATATCAAATCTAC+TGG | - | chr7_4:63022187-63022206 | Msa1169910:intron | 30.0% | |
| ATCAATCATATATGAACCTG+AGG | - | chr7_4:63022252-63022271 | Msa1169910:CDS | 30.0% | |
| TCAATCATATATGAACCTGA+GGG | - | chr7_4:63022253-63022272 | Msa1169910:CDS | 30.0% | |
| GATAAAAGAGGAATCACATA+CGG | + | chr7_4:63022326-63022345 | None:intergenic | 30.0% | |
| ! | GTGATTCCTCTTTTATCATT+AGG | - | chr7_4:63022329-63022348 | Msa1169910:intron | 30.0% |
| AGGAATCCTAATGATAAAAG+AGG | + | chr7_4:63022338-63022357 | None:intergenic | 30.0% | |
| !! | AAAGCAGAAGGTATTAAGAA+CGG | - | chr7_4:63022558-63022577 | Msa1169910:CDS | 30.0% |
| GAGTTGAAGAAAGAACTAAA+GGG | - | chr7_4:63022691-63022710 | Msa1169910:CDS | 30.0% | |
| AGAATGATATGGCATATAAC+TGG | + | chr7_4:63023221-63023240 | None:intergenic | 30.0% | |
| TCCTATAACACAGAATGATA+TGG | + | chr7_4:63023232-63023251 | None:intergenic | 30.0% | |
| !!! | AGTTTTGTAACGGATAAGTA+AGG | - | chr7_4:63023327-63023346 | Msa1169910:intron | 30.0% |
| ! | GATTTTATCTTACAGTTCTC+AGG | - | chr7_4:63023365-63023384 | Msa1169910:intron | 30.0% |
| ! | TCTCAGGTTTTTGATACATT+TGG | - | chr7_4:63023381-63023400 | Msa1169910:intron | 30.0% |
| GGTATCCTATATATAAGGAA+AGG | + | chr7_4:63023500-63023519 | None:intergenic | 30.0% | |
| AAGGCGAATTCATATCCTTA+GGG | + | chr7_4:63018714-63018733 | None:intergenic | 35.0% | |
| TAAGGCGAATTCATATCCTT+AGG | + | chr7_4:63018715-63018734 | None:intergenic | 35.0% | |
| TTTGTTCGTGTGTGAACATT+TGG | - | chr7_4:63018810-63018829 | Msa1169910:exon | 35.0% | |
| ! | AAATCAGTTTACCCCTTTTC+AGG | - | chr7_4:63018984-63019003 | Msa1169910:intron | 35.0% |
| ! | AGGAAACTGTGCATTTTGAA+AGG | - | chr7_4:63019094-63019113 | Msa1169910:intron | 35.0% |
| AGCCTTTGGTTGAAATACAT+AGG | - | chr7_4:63019203-63019222 | Msa1169910:CDS | 35.0% | |
| GCCTTTGGTTGAAATACATA+GGG | - | chr7_4:63019204-63019223 | Msa1169910:CDS | 35.0% | |
| GAGAAAAATTAAGAAAGCCG+AGG | - | chr7_4:63019243-63019262 | Msa1169910:CDS | 35.0% | |
| ATCCTATCTATCTTGGGTTT+AGG | + | chr7_4:63019313-63019332 | None:intergenic | 35.0% | |
| CGGATTATCCTATCTATCTT+GGG | + | chr7_4:63019319-63019338 | None:intergenic | 35.0% | |
| ! | ACGGATTATCCTATCTATCT+TGG | + | chr7_4:63019320-63019339 | None:intergenic | 35.0% |
| !!! | ATTTTTTTGCTTTCAGTCGC+AGG | + | chr7_4:63019421-63019440 | None:intergenic | 35.0% |
| TTGAGGGTCAGAAAATAACA+TGG | - | chr7_4:63019897-63019916 | Msa1169910:intron | 35.0% | |
| GGGAGGATACTTCAAATTAA+TGG | + | chr7_4:63020286-63020305 | None:intergenic | 35.0% | |
| AAATAGAGTCCAAGCAAGAT+GGG | - | chr7_4:63020522-63020541 | Msa1169910:intron | 35.0% | |
| CTAACTCGGTAAATGCTATA+AGG | + | chr7_4:63020743-63020762 | None:intergenic | 35.0% | |
| ! | TGTAATGATTGCATCCGTTT+TGG | - | chr7_4:63021017-63021036 | Msa1169910:intron | 35.0% |
| GTTTAATTATTCAGGCACCA+AGG | - | chr7_4:63021039-63021058 | Msa1169910:intron | 35.0% | |
| ACAAAAAGCAATGATTCCCT+TGG | + | chr7_4:63021059-63021078 | None:intergenic | 35.0% | |
| !!! | TTTGTTATTCCTGCTTTTGG+TGG | - | chr7_4:63021074-63021093 | Msa1169910:intron | 35.0% |
| !! | TTTTGGTGGTACAGTTTCAT+GGG | - | chr7_4:63021088-63021107 | Msa1169910:intron | 35.0% |
| CATTTCTTCAGATCGTTGAT+AGG | - | chr7_4:63021226-63021245 | Msa1169910:intron | 35.0% | |
| GTTGAACATATTCTCTTGAG+AGG | + | chr7_4:63021272-63021291 | None:intergenic | 35.0% | |
| GAGAATATGTTCAACCACAA+TGG | - | chr7_4:63021277-63021296 | Msa1169910:intron | 35.0% | |
| TATTTGACTGTGTGAATGCA+CGG | - | chr7_4:63021301-63021320 | Msa1169910:CDS | 35.0% | |
| TCAGAACAAATAAGAACCCT+AGG | + | chr7_4:63021527-63021546 | None:intergenic | 35.0% | |
| !!! | TGGTCTGAGAAAAGCATTTT+TGG | - | chr7_4:63021570-63021589 | Msa1169910:intron | 35.0% |
| TTCCAATAATAAGGAACGGA+GGG | + | chr7_4:63021767-63021786 | None:intergenic | 35.0% | |
| GAGGTTCCAATAATAAGGAA+CGG | + | chr7_4:63021771-63021790 | None:intergenic | 35.0% | |
| TGTTGGAGGTTCCAATAATA+AGG | + | chr7_4:63021776-63021795 | None:intergenic | 35.0% | |
| ACGGGTCTATAAATTTGTAG+AGG | - | chr7_4:63021945-63021964 | Msa1169910:intron | 35.0% | |
| CGGGTCTATAAATTTGTAGA+GGG | - | chr7_4:63021946-63021965 | Msa1169910:intron | 35.0% | |
| GGGTCTTAAATTAGAGTCAA+AGG | - | chr7_4:63022009-63022028 | Msa1169910:intron | 35.0% | |
| CCTAATTATCTATGCAGTTG+GGG | + | chr7_4:63022091-63022110 | None:intergenic | 35.0% | |
| CCCTAATTATCTATGCAGTT+GGG | + | chr7_4:63022092-63022111 | None:intergenic | 35.0% | |
| CCCAACTGCATAGATAATTA+GGG | - | chr7_4:63022089-63022108 | Msa1169910:CDS | 35.0% | |
| TCCCTAATTATCTATGCAGT+TGG | + | chr7_4:63022093-63022112 | None:intergenic | 35.0% | |
| ACTGCATAGATAATTAGGGA+CGG | - | chr7_4:63022093-63022112 | Msa1169910:CDS | 35.0% | |
| CATCAGGATTGTTAAATGAG+TGG | - | chr7_4:63022583-63022602 | Msa1169910:CDS | 35.0% | |
| AGGATTGTTAAATGAGTGGA+GGG | - | chr7_4:63022587-63022606 | Msa1169910:CDS | 35.0% | |
| GGAGTTGAAGAAAGAACTAA+AGG | - | chr7_4:63022690-63022709 | Msa1169910:CDS | 35.0% | |
| GTTCAAGCTAATACTGATGA+TGG | - | chr7_4:63022796-63022815 | Msa1169910:CDS | 35.0% | |
| !! | TTTTGTTGTCACGTAGAAAG+AGG | - | chr7_4:63022836-63022855 | Msa1169910:CDS | 35.0% |
| TAGATGAAGCTCAGAATCAA+AGG | - | chr7_4:63023166-63023185 | Msa1169910:intron | 35.0% | |
| GCCATATCATTCTGTGTTAT+AGG | - | chr7_4:63023228-63023247 | Msa1169910:intron | 35.0% | |
| !! | AGGATAAGGTCGTTTTAACA+AGG | + | chr7_4:63023480-63023499 | None:intergenic | 35.0% |
| GTCACGAGATTGTTAGGTTA+GGG | + | chr7_4:63018495-63018514 | None:intergenic | 40.0% | |
| AGTCACGAGATTGTTAGGTT+AGG | + | chr7_4:63018496-63018515 | None:intergenic | 40.0% | |
| GAAGAGATGAGAAGAACTCA+CGG | + | chr7_4:63018594-63018613 | None:intergenic | 40.0% | |
| !!! | GGTAGTGATTTTTTCCCCTA+AGG | - | chr7_4:63018696-63018715 | Msa1169910:three_prime_UTR | 40.0% |
| AGGCGAATTCATATCCTTAG+GGG | + | chr7_4:63018713-63018732 | None:intergenic | 40.0% | |
| GAATCTCTCTGTCGTATTCA+GGG | - | chr7_4:63018899-63018918 | Msa1169910:intron | 40.0% | |
| AATCTCTCTGTCGTATTCAG+GGG | - | chr7_4:63018900-63018919 | Msa1169910:intron | 40.0% | |
| TCGTATTCAGGGGAAGAAAA+AGG | - | chr7_4:63018910-63018929 | Msa1169910:intron | 40.0% | |
| ATTCAGGGGAAGAAAAAGGA+AGG | - | chr7_4:63018914-63018933 | Msa1169910:intron | 40.0% | |
| !! | TTTTGAAAGGTGTAACTCCG+AGG | - | chr7_4:63019107-63019126 | Msa1169910:intron | 40.0% |
| ! | TTTGAAAGGTGTAACTCCGA+GGG | - | chr7_4:63019108-63019127 | Msa1169910:intron | 40.0% |
| GAGCCGAAGAAAAAGTTCAA+GGG | - | chr7_4:63019130-63019149 | Msa1169910:intron | 40.0% | |
| GCCCTATGTATTTCAACCAA+AGG | + | chr7_4:63019208-63019227 | None:intergenic | 40.0% | |
| TTGAACGTGCAAATAGGCTA+CGG | - | chr7_4:63019278-63019297 | Msa1169910:CDS | 40.0% | |
| CACCTAAACCCAAGATAGAT+AGG | - | chr7_4:63019308-63019327 | Msa1169910:CDS | 40.0% | |
| TAGATAGGATAATCCGTCAG+AGG | - | chr7_4:63019323-63019342 | Msa1169910:CDS | 40.0% | |
| CAAGTGCATCAACAAATCTC+GGG | + | chr7_4:63019351-63019370 | None:intergenic | 40.0% | |
| CCAAGTGCATCAACAAATCT+CGG | + | chr7_4:63019352-63019371 | None:intergenic | 40.0% | |
| TGTTGATGCACTTGGAGAAT+TGG | - | chr7_4:63019357-63019376 | Msa1169910:intron | 40.0% | |
| ATTGGATGACTGCCTTACAA+TGG | - | chr7_4:63019375-63019394 | Msa1169910:intron | 40.0% | |
| AGAATTCAGTTTAGCAGGTC+GGG | + | chr7_4:63020474-63020493 | None:intergenic | 40.0% | |
| CAGAATTCAGTTTAGCAGGT+CGG | + | chr7_4:63020475-63020494 | None:intergenic | 40.0% | |
| GCTTCAGAATTCAGTTTAGC+AGG | + | chr7_4:63020479-63020498 | None:intergenic | 40.0% | |
| CAAATAGAGTCCAAGCAAGA+TGG | - | chr7_4:63020521-63020540 | Msa1169910:intron | 40.0% | |
| AATAGAGTCCAAGCAAGATG+GGG | - | chr7_4:63020523-63020542 | Msa1169910:intron | 40.0% | |
| CAACTTCCTTCTAATGAACC+AGG | - | chr7_4:63020596-63020615 | Msa1169910:intron | 40.0% | |
| !! | CAGCTTGTTGAAAAAGTTGC+AGG | - | chr7_4:63020629-63020648 | Msa1169910:intron | 40.0% |
| CAAAATCTTCTTGAGCAGAG+AGG | - | chr7_4:63020712-63020731 | Msa1169910:CDS | 40.0% | |
| !! | CTTTTGGTGGTACAGTTTCA+TGG | - | chr7_4:63021087-63021106 | Msa1169910:intron | 40.0% |
| AAACCTGATGAGTAATGCTC+TGG | + | chr7_4:63021145-63021164 | None:intergenic | 40.0% | |
| ! | ATCGTTGATAGGGAATCTCA+AGG | - | chr7_4:63021237-63021256 | Msa1169910:intron | 40.0% |
| ACACAGTCAAATACCCATTG+TGG | + | chr7_4:63021294-63021313 | None:intergenic | 40.0% | |
| !! | GGATGCACAAGAACTTGTTT+TGG | + | chr7_4:63021457-63021476 | None:intergenic | 40.0% |
| CAACAGCAATAACCGAAGAA+CGG | + | chr7_4:63021478-63021497 | None:intergenic | 40.0% | |
| !!! | TGCCTATTTTAGGTTCACCT+AGG | - | chr7_4:63021507-63021526 | Msa1169910:CDS | 40.0% |
| !!! | GCCTATTTTAGGTTCACCTA+GGG | - | chr7_4:63021508-63021527 | Msa1169910:CDS | 40.0% |
| ACCCTAGGTGAACCTAAAAT+AGG | + | chr7_4:63021512-63021531 | None:intergenic | 40.0% | |
| ! | TCATCAGCATGTGCTTCTTT+TGG | - | chr7_4:63021550-63021569 | Msa1169910:CDS | 40.0% |
| TCATCAGTTAGTCGTGATCT+TGG | - | chr7_4:63021681-63021700 | Msa1169910:CDS | 40.0% | |
| GTTCCAATAATAAGGAACGG+AGG | + | chr7_4:63021768-63021787 | None:intergenic | 40.0% | |
| !! | ACATGTGTGCTTTTTGTTGG+AGG | + | chr7_4:63021790-63021809 | None:intergenic | 40.0% |
| GGAGTAACTCTTATCTGTCA+TGG | - | chr7_4:63022031-63022050 | Msa1169910:CDS | 40.0% | |
| CCCCAACTGCATAGATAATT+AGG | - | chr7_4:63022088-63022107 | Msa1169910:CDS | 40.0% | |
| CATAGATAATTAGGGACGGA+GGG | - | chr7_4:63022097-63022116 | Msa1169910:CDS | 40.0% | |
| ATAGATAATTAGGGACGGAG+GGG | - | chr7_4:63022098-63022117 | Msa1169910:CDS | 40.0% | |
| TTCTTCTTATCTGTTCCCTC+AGG | + | chr7_4:63022271-63022290 | None:intergenic | 40.0% | |
| TTAAGGGTCTTTGCATACTC+CGG | + | chr7_4:63022409-63022428 | None:intergenic | 40.0% | |
| AGCAGCTTGCAAGTGTTTAA+GGG | + | chr7_4:63022425-63022444 | None:intergenic | 40.0% | |
| GGAAGATCCTCAAAATCTTC+TGG | - | chr7_4:63022489-63022508 | Msa1169910:intron | 40.0% | |
| CAGGATTGTTAAATGAGTGG+AGG | - | chr7_4:63022586-63022605 | Msa1169910:CDS | 40.0% | |
| CTGCAAAACAGCCATTGAAA+AGG | + | chr7_4:63022641-63022660 | None:intergenic | 40.0% | |
| GTTCTTTCTTCAACTCCTCA+CGG | + | chr7_4:63022687-63022706 | None:intergenic | 40.0% | |
| GTGAAACATACACTTCAGCA+GGG | - | chr7_4:63022713-63022732 | Msa1169910:CDS | 40.0% | |
| ! | AATCCATATTGGTTGCCAAG+TGG | - | chr7_4:63022990-63023009 | Msa1169910:intron | 40.0% |
| CTCAGAATCAAAGGAGTTGA+AGG | - | chr7_4:63023175-63023194 | Msa1169910:intron | 40.0% | |
| TGAAGGATTCTGCATTCTCA+AGG | - | chr7_4:63023192-63023211 | Msa1169910:intron | 40.0% | |
| AAAAATTGCCACACACCTGA+AGG | - | chr7_4:63023411-63023430 | Msa1169910:intron | 40.0% | |
| ! | AATTTGTTCCCTACACCTTC+AGG | + | chr7_4:63023429-63023448 | None:intergenic | 40.0% |
| CGAATCTCTCTGTCGTATTC+AGG | - | chr7_4:63018898-63018917 | Msa1169910:intron | 45.0% | |
| TTGAAGCTGCTTGAGTGCTT+GGG | + | chr7_4:63018966-63018985 | None:intergenic | 45.0% | |
| ! | TTTGAAGCTGCTTGAGTGCT+TGG | + | chr7_4:63018967-63018986 | None:intergenic | 45.0% |
| AGCAAACGGAACCTGAAAAG+GGG | + | chr7_4:63018998-63019017 | None:intergenic | 45.0% | |
| CAGCAAACGGAACCTGAAAA+GGG | + | chr7_4:63018999-63019018 | None:intergenic | 45.0% | |
| TCAGCAAACGGAACCTGAAA+AGG | + | chr7_4:63019000-63019019 | None:intergenic | 45.0% | |
| !! | AACTTTTTCTTCGGCTCCCT+CGG | + | chr7_4:63019127-63019146 | None:intergenic | 45.0% |
| GGAGCCGAAGAAAAAGTTCA+AGG | - | chr7_4:63019129-63019148 | Msa1169910:intron | 45.0% | |
| ! | CTTTTTACACCACGAGCCTT+TGG | - | chr7_4:63019189-63019208 | Msa1169910:CDS | 45.0% |
| GTATTTCAACCAAAGGCTCG+TGG | + | chr7_4:63019201-63019220 | None:intergenic | 45.0% | |
| TGAACGTGCAAATAGGCTAC+GGG | - | chr7_4:63019279-63019298 | Msa1169910:CDS | 45.0% | |
| !! | CCGAGATTTGTTGATGCACT+TGG | - | chr7_4:63019349-63019368 | Msa1169910:intron | 45.0% |
| TTTGCTTTCAGTCGCAGGTA+CGG | + | chr7_4:63019416-63019435 | None:intergenic | 45.0% | |
| AGCTTGTCCACAAATGTCGA+AGG | - | chr7_4:63019449-63019468 | Msa1169910:CDS | 45.0% | |
| ! | TGTCTGCCTGTGTTCTAGAT+TGG | - | chr7_4:63019704-63019723 | Msa1169910:intron | 45.0% |
| ! | GTTCTAGATTGGCGCATGAA+TGG | - | chr7_4:63019715-63019734 | Msa1169910:intron | 45.0% |
| TTTGTGCAGGCTGAAGTTGA+GGG | - | chr7_4:63019881-63019900 | Msa1169910:intron | 45.0% | |
| AACTCCTCATTCACTGCAAC+AGG | - | chr7_4:63019922-63019941 | Msa1169910:intron | 45.0% | |
| ACAACCTGTTGCAGTGAATG+AGG | + | chr7_4:63019929-63019948 | None:intergenic | 45.0% | |
| GAATTGATGCAGCCTCTTCT+TGG | - | chr7_4:63020234-63020253 | Msa1169910:intron | 45.0% | |
| AGTGCACCTGGTTCATTAGA+AGG | + | chr7_4:63020605-63020624 | None:intergenic | 45.0% | |
| GTTGAAAAAGTTGCAGGCGA+AGG | - | chr7_4:63020635-63020654 | Msa1169910:intron | 45.0% | |
| GAAACTGTACCACCAAAAGC+AGG | + | chr7_4:63021086-63021105 | None:intergenic | 45.0% | |
| CTCTGGTCAGATTCTGCAAA+GGG | + | chr7_4:63021128-63021147 | None:intergenic | 45.0% | |
| ! | TGACCAGAGCATTACTCATC+AGG | - | chr7_4:63021139-63021158 | Msa1169910:intron | 45.0% |
| GTTCTTGTGCATCCGTTCTT+CGG | - | chr7_4:63021463-63021482 | Msa1169910:CDS | 45.0% | |
| CTCCCTCCGTTCCTTATTAT+TGG | - | chr7_4:63021762-63021781 | Msa1169910:intron | 45.0% | |
| TTGTAGAGGGCCGTGTATTT+AGG | - | chr7_4:63021959-63021978 | Msa1169910:intron | 45.0% | |
| GCATAGATAATTAGGGACGG+AGG | - | chr7_4:63022096-63022115 | Msa1169910:CDS | 45.0% | |
| TAGATAATTAGGGACGGAGG+GGG | - | chr7_4:63022099-63022118 | Msa1169910:CDS | 45.0% | |
| CCTTCGTCATAGTCAACGAA+AGG | + | chr7_4:63022376-63022395 | None:intergenic | 45.0% | |
| ! | CCTTTCGTTGACTATGACGA+AGG | - | chr7_4:63022373-63022392 | Msa1169910:intron | 45.0% |
| ! | TGACGAAGGAGCATATGTTC+CGG | - | chr7_4:63022387-63022406 | Msa1169910:intron | 45.0% |
| CAGCAGCTTGCAAGTGTTTA+AGG | + | chr7_4:63022426-63022445 | None:intergenic | 45.0% | |
| AAGTGGAAGGACTTCCTTTC+TGG | + | chr7_4:63022449-63022468 | None:intergenic | 45.0% | |
| !!! | TCTTTTTCAGCACCTGGAAG+TGG | + | chr7_4:63022466-63022485 | None:intergenic | 45.0% |
| !! | TCCAGGTGCTGAAAAAGATC+TGG | - | chr7_4:63022468-63022487 | Msa1169910:intron | 45.0% |
| !!! | TCCAGATCTTTTTCAGCACC+TGG | + | chr7_4:63022472-63022491 | None:intergenic | 45.0% |
| ! | TCCTCAAAATCTTCTGGCTG+AGG | - | chr7_4:63022495-63022514 | Msa1169910:intron | 45.0% |
| ! | CCTCAAAATCTTCTGGCTGA+GGG | - | chr7_4:63022496-63022515 | Msa1169910:intron | 45.0% |
| GGTATTAAGAACGGTGCATC+AGG | - | chr7_4:63022567-63022586 | Msa1169910:CDS | 45.0% | |
| ! | TGTTTTGCAGCTGATGAAGC+AGG | - | chr7_4:63022651-63022670 | Msa1169910:CDS | 45.0% |
| GGTGAAACATACACTTCAGC+AGG | - | chr7_4:63022712-63022731 | Msa1169910:CDS | 45.0% | |
| TTCACCAGTCTGAATGACTG+CGG | + | chr7_4:63022764-63022783 | None:intergenic | 45.0% | |
| GAAGCTACTTGAAGCTATGC+AGG | - | chr7_4:63022858-63022877 | Msa1169910:CDS | 45.0% | |
| CACGCAGTCACGAGATTGTT+AGG | + | chr7_4:63018501-63018520 | None:intergenic | 50.0% | |
| ACGGCTGTTGTGAGAAGAAG+AGG | + | chr7_4:63018535-63018554 | None:intergenic | 50.0% | |
| ACCATTGCTGAAGCTGCTGA+CGG | + | chr7_4:63018554-63018573 | None:intergenic | 50.0% | |
| AGATGAGAAGAACTCACGGC+GGG | + | chr7_4:63018590-63018609 | None:intergenic | 50.0% | |
| GAGATGAGAAGAACTCACGG+CGG | + | chr7_4:63018591-63018610 | None:intergenic | 50.0% | |
| ATGCCGCTAAGTTTGTCACC+AGG | - | chr7_4:63018939-63018958 | Msa1169910:intron | 50.0% | |
| GGTCCTGGTGACAAACTTAG+CGG | + | chr7_4:63018945-63018964 | None:intergenic | 50.0% | |
| CAAATCTCGGGTACCTCTGA+CGG | + | chr7_4:63019339-63019358 | None:intergenic | 50.0% | |
| ! | CATGCGCCAATCTAGAACAC+AGG | + | chr7_4:63019713-63019732 | None:intergenic | 50.0% |
| GTTTGTGCAGGCTGAAGTTG+AGG | - | chr7_4:63019880-63019899 | Msa1169910:intron | 50.0% | |
| ACTGCAACAGGTTGTGTCTG+AGG | - | chr7_4:63019934-63019953 | Msa1169910:intron | 50.0% | |
| CAAAACAGTACCTGCTGCCA+AGG | + | chr7_4:63020331-63020350 | None:intergenic | 50.0% | |
| ACAAGCTGCATTAGTGCACC+TGG | + | chr7_4:63020617-63020636 | None:intergenic | 50.0% | |
| TGGTGGTACAGTTTCATGGG+AGG | - | chr7_4:63021091-63021110 | Msa1169910:intron | 50.0% | |
| GGTGGTACAGTTTCATGGGA+GGG | - | chr7_4:63021092-63021111 | Msa1169910:intron | 50.0% | |
| ACAGTTTCATGGGAGGGAGA+AGG | - | chr7_4:63021098-63021117 | Msa1169910:intron | 50.0% | |
| CAGTTTCATGGGAGGGAGAA+GGG | - | chr7_4:63021099-63021118 | Msa1169910:intron | 50.0% | |
| AGTTTCATGGGAGGGAGAAG+GGG | - | chr7_4:63021100-63021119 | Msa1169910:intron | 50.0% | |
| GCTCTGGTCAGATTCTGCAA+AGG | + | chr7_4:63021129-63021148 | None:intergenic | 50.0% | |
| ACGGAGGGGGTAACTCTTAT+CGG | - | chr7_4:63022112-63022131 | Msa1169910:intron | 50.0% | |
| TCAACGAAAGGCGACAAGTG+CGG | + | chr7_4:63022364-63022383 | None:intergenic | 50.0% | |
| AAGGAAGTCCTTCCACTTCC+AGG | - | chr7_4:63022451-63022470 | Msa1169910:intron | 50.0% | |
| TTTCAGCACCTGGAAGTGGA+AGG | + | chr7_4:63022462-63022481 | None:intergenic | 50.0% | |
| ! | CCCTCAGCCAGAAGATTTTG+AGG | + | chr7_4:63022499-63022518 | None:intergenic | 50.0% |
| TCGTGCAGCTGCAAATGAAG+CGG | - | chr7_4:63022528-63022547 | Msa1169910:intron | 50.0% | |
| AGCGGCTGAGAAAAAGCAGA+AGG | - | chr7_4:63022546-63022565 | Msa1169910:CDS | 50.0% | |
| TCTACCGCAGTCATTCAGAC+TGG | - | chr7_4:63022757-63022776 | Msa1169910:CDS | 50.0% | |
| !! | TACTGATGATGGCGCTGAGA+TGG | - | chr7_4:63022807-63022826 | Msa1169910:CDS | 50.0% |
| !! | ACTGATGATGGCGCTGAGAT+GGG | - | chr7_4:63022808-63022827 | Msa1169910:CDS | 50.0% |
| ! | CTGCCACTTGGCAACCAATA+TGG | + | chr7_4:63022996-63023015 | None:intergenic | 50.0% |
| ! | CATATTGGTTGCCAAGTGGC+AGG | - | chr7_4:63022994-63023013 | Msa1169910:intron | 50.0% |
| TACCAGACAAACCTGCCACT+TGG | + | chr7_4:63023008-63023027 | None:intergenic | 50.0% | |
| TCCAAGCGAGGATCGAGGAT+GGG | + | chr7_4:63020306-63020325 | None:intergenic | 55.0% | |
| AGTTGCAGGCGAAGGTGAAG+AGG | - | chr7_4:63020643-63020662 | Msa1169910:intron | 55.0% | |
| CTTGCAAGCTGCTGCCAGAA+AGG | - | chr7_4:63022432-63022451 | Msa1169910:intron | 55.0% | |
| TGCCAAGTGGCAGGTTTGTC+TGG | - | chr7_4:63023003-63023022 | Msa1169910:intron | 55.0% | |
| ! | TGCCACACACCTGAAGGTGT+AGG | - | chr7_4:63023417-63023436 | Msa1169910:intron | 55.0% |
| ! | GCCACACACCTGAAGGTGTA+GGG | - | chr7_4:63023418-63023437 | Msa1169910:intron | 55.0% |
| TCCCTACACCTTCAGGTGTG+TGG | + | chr7_4:63023422-63023441 | None:intergenic | 55.0% | |
| GCCGTCAGCAGCTTCAGCAA+TGG | - | chr7_4:63018550-63018569 | Msa1169910:three_prime_UTR | 60.0% | |
| CTGCTTGAGTGCTTGGGTCC+TGG | + | chr7_4:63018960-63018979 | None:intergenic | 60.0% | |
| AAGCGAGGATCGAGGATGGG+AGG | + | chr7_4:63020303-63020322 | None:intergenic | 60.0% | |
| TCCCATCCTCGATCCTCGCT+TGG | - | chr7_4:63020302-63020321 | Msa1169910:intron | 60.0% | |
| CTCCAAGCGAGGATCGAGGA+TGG | + | chr7_4:63020307-63020326 | None:intergenic | 60.0% | |
| CATCCTCGATCCTCGCTTGG+AGG | - | chr7_4:63020305-63020324 | Msa1169910:intron | 60.0% | |
| GGTCTGTGCCCCATCTTGCT+TGG | + | chr7_4:63020534-63020553 | None:intergenic | 60.0% | |
| AAAGGCGACAAGTGCGGTGG+AGG | + | chr7_4:63022358-63022377 | None:intergenic | 60.0% | |
| ACGAAAGGCGACAAGTGCGG+TGG | + | chr7_4:63022361-63022380 | None:intergenic | 60.0% | |
| AGGCCTCCAAGCGAGGATCG+AGG | + | chr7_4:63020311-63020330 | None:intergenic | 65.0% | |
| CGATCCTCGCTTGGAGGCCT+TGG | - | chr7_4:63020311-63020330 | Msa1169910:intron | 65.0% | |
| GCAGGAGCAGCGATTCCGTG+AGG | - | chr7_4:63022669-63022688 | Msa1169910:CDS | 65.0% | |
| GCTGCCAAGGCCTCCAAGCG+AGG | + | chr7_4:63020318-63020337 | None:intergenic | 70.0% | |
| CGCTTGGAGGCCTTGGCAGC+AGG | - | chr7_4:63020318-63020337 | Msa1169910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63018480 | 63023533 | 63018480 | ID=Msa1169910;Name=Msa1169910 |
| chr7_4 | mRNA | 63018480 | 63023533 | 63018480 | ID=Msa1169910-mRNA-1;Parent=Msa1169910;Name=Msa1169910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=89|1|1|1|1|1|12|339|608 |
| chr7_4 | exon | 63018480 | 63018905 | 63018480 | ID=Msa1169910-mRNA-1:exon:20112;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63019134 | 63019352 | 63019134 | ID=Msa1169910-mRNA-1:exon:20111;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63019446 | 63019662 | 63019446 | ID=Msa1169910-mRNA-1:exon:20110;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63020655 | 63020776 | 63020655 | ID=Msa1169910-mRNA-1:exon:20109;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63020853 | 63020960 | 63020853 | ID=Msa1169910-mRNA-1:exon:20108;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63021280 | 63021578 | 63021280 | ID=Msa1169910-mRNA-1:exon:20107;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63021674 | 63021767 | 63021674 | ID=Msa1169910-mRNA-1:exon:20106;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63022013 | 63022123 | 63022013 | ID=Msa1169910-mRNA-1:exon:20105;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63022207 | 63022291 | 63022207 | ID=Msa1169910-mRNA-1:exon:20104;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63022543 | 63022917 | 63022543 | ID=Msa1169910-mRNA-1:exon:20103;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63023008 | 63023093 | 63023008 | ID=Msa1169910-mRNA-1:exon:20102;Parent=Msa1169910-mRNA-1 |
| chr7_4 | exon | 63023421 | 63023533 | 63023421 | ID=Msa1169910-mRNA-1:exon:20101;Parent=Msa1169910-mRNA-1 |
| chr7_4 | five_prime_UTR | 63023445 | 63023533 | 63023445 | ID=Msa1169910-mRNA-1:five_prime_utr;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63023421 | 63023444 | 63023421 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63023008 | 63023093 | 63023008 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63022543 | 63022917 | 63022543 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63022207 | 63022291 | 63022207 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63022013 | 63022123 | 63022013 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63021674 | 63021767 | 63021674 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63021280 | 63021578 | 63021280 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63020853 | 63020960 | 63020853 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63020655 | 63020776 | 63020655 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63019446 | 63019662 | 63019446 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63019134 | 63019352 | 63019134 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | CDS | 63018819 | 63018905 | 63018819 | ID=Msa1169910-mRNA-1:cds;Parent=Msa1169910-mRNA-1 |
| chr7_4 | three_prime_UTR | 63018480 | 63018818 | 63018480 | ID=Msa1169910-mRNA-1:three_prime_utr;Parent=Msa1169910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
