AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0016710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016710 MtrunA17_Chr1g0168391 99.232 521 4 0 1 521 1 521 0.0 1075
Msa0016710 MtrunA17_Chr3g0093681 28.214 280 180 9 239 511 287 552 6.30e-25 108
Msa0016710 MtrunA17_Chr1g0172501 28.315 279 181 9 239 511 287 552 1.75e-24 107
Msa0016710 MtrunA17_Chr1g0185501 24.756 307 221 6 211 513 14 314 8.03e-22 96.3
Msa0016710 MtrunA17_Chr5g0405851 27.703 296 176 12 239 511 169 449 1.33e-19 91.7
Msa0016710 MtrunA17_Chr4g0067151 28.230 209 142 4 224 427 78 283 1.96e-18 86.7
Msa0016710 MtrunA17_Chr4g0067151 24.031 258 142 5 261 511 22 232 4.74e-15 76.3
Msa0016710 MtrunA17_Chr4g0067151 27.041 196 133 6 237 425 133 325 1.42e-12 68.9
Msa0016710 MtrunA17_Chr2g0281451 28.824 170 117 2 259 427 51 217 3.37e-18 88.6
Msa0016710 MtrunA17_Chr2g0281451 26.163 172 124 1 250 421 84 252 4.11e-15 78.6
Msa0016710 MtrunA17_Chr2g0281451 27.972 143 94 2 237 376 113 249 1.05e-12 70.9
Msa0016710 MtrunA17_Chr6g0448921 26.818 220 155 3 235 453 28 242 3.89e-18 88.2
Msa0016710 MtrunA17_Chr6g0448921 24.257 202 150 1 226 427 61 259 1.42e-15 80.1
Msa0016710 MtrunA17_Chr6g0448921 23.671 207 144 6 310 511 15 212 1.08e-11 67.4
Msa0016710 MtrunA17_Chr3g0136971 28.191 188 131 2 237 423 432 616 1.22e-16 83.2
Msa0016710 MtrunA17_Chr3g0136971 27.632 228 156 5 239 462 389 611 3.09e-16 82.0
Msa0016710 MtrunA17_Chr3g0136971 28.834 163 113 1 239 401 476 635 1.53e-15 79.7
Msa0016710 MtrunA17_Chr1g0148791 26.738 187 131 3 238 423 636 817 3.05e-14 75.9
Msa0016710 MtrunA17_Chr3g0138311 27.807 187 129 3 238 423 635 816 4.09e-14 75.5
Msa0016710 MtrunA17_Chr8g0392701 25.188 266 173 9 169 423 12 262 8.60e-14 72.4
Msa0016710 MtrunA17_Chr4g0053651 22.222 351 230 9 195 511 192 533 8.63e-13 70.9
Msa0016710 MtrunA17_Chr4g0053651 27.612 268 174 9 220 477 286 543 9.09e-13 70.9
Msa0016710 MtrunA17_Chr1g0171711 24.727 275 194 8 238 511 523 785 1.02e-12 70.9
Msa0016710 MtrunA17_Chr2g0295791 28.049 164 114 2 262 424 166 326 1.05e-12 70.1
Msa0016710 MtrunA17_Chr7g0253861 25.573 262 178 9 259 511 48 301 2.42e-12 68.2
Msa0016710 MtrunA17_Chr2g0282401 25.871 201 142 4 222 421 510 704 2.92e-12 69.3
Msa0016710 MtrunA17_Chr7g0237271 25.668 187 133 4 238 423 521 702 2.94e-12 69.3
Msa0016710 MtrunA17_Chr8g0352821 23.858 197 142 4 239 432 198 389 4.82e-12 68.6
Msa0016710 MtrunA17_Chr8g0352821 23.977 171 115 4 227 390 312 474 8.39e-11 64.7
Msa0016710 MtrunA17_Chr5g0401661 22.692 260 152 5 221 432 393 651 7.67e-12 68.2
Msa0016710 MtrunA17_Chr3g0144511 27.586 203 128 8 239 422 122 324 8.93e-12 67.0
Msa0016710 MtrunA17_Chr3g0116561 26.178 191 135 4 239 427 240 426 1.41e-11 67.0
Msa0016710 MtrunA17_Chr4g0059031 26.455 189 126 5 250 428 44 229 1.56e-11 67.0
Msa0016710 MtrunA17_Chr4g0059031 28.834 163 112 2 260 421 494 653 7.05e-11 65.1
Msa0016710 MtrunA17_Chr4g0062881 24.865 185 131 5 238 421 194 371 1.88e-11 66.2
Msa0016710 MtrunA17_Chr3g0099061 25.444 169 119 3 273 434 221 389 2.86e-11 65.9
Msa0016710 MtrunA17_Chr7g0246741 25.000 252 168 8 268 511 286 524 5.23e-11 65.5
Msa0016710 MtrunA17_Chr4g0057141 22.394 259 171 9 257 499 345 589 6.02e-11 65.1
Msa0016710 MtrunA17_Chr7g0266251 23.077 208 138 5 235 420 80 287 6.55e-11 63.9
Msa0016710 MtrunA17_Chr1g0185891 22.394 259 171 9 257 499 284 528 9.01e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016710 AT2G33340.2 74.181 519 126 4 1 517 1 513 0.0 811
Msa0016710 AT2G33340.1 74.181 519 126 4 1 517 1 513 0.0 811
Msa0016710 AT1G04510.2 73.333 525 131 4 1 522 1 519 0.0 801
Msa0016710 AT1G04510.1 73.143 525 132 4 1 522 1 519 0.0 801
Msa0016710 AT2G33340.3 74.385 488 117 4 1 486 1 482 0.0 760
Msa0016710 AT2G41500.1 27.682 289 192 9 238 521 269 545 1.03e-27 117
Msa0016710 AT2G41500.2 27.682 289 192 9 238 521 269 545 1.03e-27 117
Msa0016710 AT3G49660.1 29.412 204 134 6 231 427 76 276 1.03e-17 84.7
Msa0016710 AT3G49660.1 24.436 266 191 5 254 516 59 317 1.56e-16 81.3
Msa0016710 AT3G49660.1 24.885 217 151 5 261 469 19 231 3.59e-14 73.9
Msa0016710 AT5G08390.1 25.000 260 173 10 259 511 9 253 1.55e-17 86.7
Msa0016710 AT5G08390.1 25.773 194 140 2 235 427 28 218 8.62e-17 84.3
Msa0016710 AT5G08390.1 22.772 202 153 1 226 427 61 259 2.51e-13 73.2
Msa0016710 AT5G23430.3 25.871 201 145 2 235 434 28 225 2.95e-17 85.9
Msa0016710 AT5G23430.3 23.267 202 152 1 226 427 61 259 6.78e-14 75.1
Msa0016710 AT5G23430.2 25.871 201 145 2 235 434 28 225 2.95e-17 85.9
Msa0016710 AT5G23430.2 23.267 202 152 1 226 427 61 259 6.78e-14 75.1
Msa0016710 AT5G23430.1 25.871 201 145 2 235 434 28 225 2.97e-17 85.9
Msa0016710 AT5G23430.1 23.267 202 152 1 226 427 61 259 6.61e-14 75.1
Msa0016710 AT5G56130.1 25.828 302 163 10 264 512 18 311 2.91e-16 80.1
Msa0016710 AT1G61210.3 26.020 196 139 3 259 453 51 241 2.75e-15 79.7
Msa0016710 AT1G61210.3 24.419 172 127 1 250 421 84 252 1.09e-12 71.2
Msa0016710 AT1G61210.3 25.463 216 146 7 301 511 6 211 2.31e-12 70.5
Msa0016710 AT1G11160.2 22.780 259 186 8 256 511 5 252 2.91e-15 79.7
Msa0016710 AT1G11160.2 25.581 172 125 1 250 421 84 252 1.28e-14 77.4
Msa0016710 AT1G11160.4 22.780 259 186 8 256 511 5 252 2.96e-15 79.7
Msa0016710 AT1G11160.4 25.581 172 125 1 250 421 84 252 1.26e-14 77.4
Msa0016710 AT1G61210.1 26.020 196 139 3 259 453 51 241 3.15e-15 79.7
Msa0016710 AT1G61210.1 24.419 172 127 1 250 421 84 252 1.24e-12 71.2
Msa0016710 AT1G61210.1 25.463 216 146 7 301 511 6 211 2.93e-12 70.1
Msa0016710 AT1G11160.1 22.780 259 186 8 256 511 5 252 3.23e-15 79.3
Msa0016710 AT1G11160.1 25.581 172 125 1 250 421 84 252 1.43e-14 77.4
Msa0016710 AT1G61210.2 26.020 196 139 3 259 453 51 241 3.29e-15 79.3
Msa0016710 AT1G61210.2 24.419 172 127 1 250 421 84 252 1.25e-12 71.2
Msa0016710 AT1G61210.2 25.463 216 146 7 301 511 6 211 3.22e-12 70.1
Msa0016710 AT5G25150.1 22.985 335 217 9 167 476 305 623 3.67e-15 79.0
Msa0016710 AT4G02730.1 24.306 288 197 9 240 518 17 292 4.04e-15 77.0
Msa0016710 AT4G02730.1 21.311 244 187 4 237 478 56 296 2.62e-12 68.6
Msa0016710 AT5G25150.2 22.985 335 217 9 167 476 305 623 4.06e-15 79.0
Msa0016710 AT1G11160.3 23.684 190 141 2 233 421 24 210 1.00e-14 77.8
Msa0016710 AT1G11160.3 22.381 210 155 5 303 511 8 210 2.77e-14 76.6
Msa0016710 AT1G11160.3 24.742 194 140 3 261 453 11 199 5.37e-14 75.5
Msa0016710 AT1G18080.1 25.888 197 141 3 231 423 68 263 9.79e-14 72.8
Msa0016710 AT4G15900.1 28.049 164 114 2 262 424 172 332 1.57e-13 73.2
Msa0016710 AT4G15900.1 27.556 225 150 7 226 446 262 477 3.19e-11 66.2
Msa0016710 AT2G32700.7 24.390 205 147 5 221 423 526 724 1.76e-13 73.9
Msa0016710 AT2G32700.2 24.390 205 147 5 221 423 507 705 1.80e-13 73.6
Msa0016710 AT2G32700.5 24.390 205 147 5 221 423 507 705 1.80e-13 73.6
Msa0016710 AT2G32700.1 24.390 205 147 5 221 423 507 705 1.80e-13 73.6
Msa0016710 AT2G32700.4 24.390 205 147 5 221 423 507 705 1.80e-13 73.6
Msa0016710 AT2G32700.3 24.390 205 147 5 221 423 507 705 1.80e-13 73.6
Msa0016710 AT2G32700.6 24.390 205 147 5 221 423 505 703 1.82e-13 73.6
Msa0016710 AT5G67320.1 23.372 261 150 6 220 432 321 579 3.94e-13 72.4
Msa0016710 AT5G13480.3 24.771 218 118 6 258 432 103 317 2.82e-12 69.7
Msa0016710 AT5G13480.3 26.923 156 109 3 227 380 240 392 1.69e-11 67.4
Msa0016710 AT1G48630.1 24.876 201 137 6 231 423 68 262 3.01e-12 68.2
Msa0016710 AT1G48630.1 26.296 270 172 13 256 511 4 260 7.02e-11 64.3
Msa0016710 AT5G13480.4 24.771 218 118 6 258 432 103 317 3.05e-12 69.7
Msa0016710 AT5G13480.4 26.923 156 109 3 227 380 240 392 1.78e-11 67.0
Msa0016710 AT5G13480.1 24.771 218 118 6 258 432 115 329 3.34e-12 69.7
Msa0016710 AT5G13480.1 26.923 156 109 3 227 380 252 404 1.77e-11 67.4
Msa0016710 AT5G13480.2 24.771 218 118 6 258 432 126 340 3.47e-12 69.3
Msa0016710 AT5G13480.2 26.923 156 109 3 227 380 263 415 2.00e-11 67.0
Msa0016710 AT3G18130.1 24.876 201 137 6 231 423 68 262 3.51e-12 68.2
Msa0016710 AT3G18130.1 26.667 270 171 13 256 511 4 260 8.57e-11 63.9
Msa0016710 AT1G10580.1 23.622 254 174 11 257 499 273 517 4.92e-12 68.9
Msa0016710 AT3G16650.1 25.403 248 168 6 188 424 84 325 5.84e-12 68.6
Msa0016710 AT5G16750.1 27.072 181 122 4 250 423 44 221 7.25e-12 68.6
Msa0016710 AT5G16750.1 26.994 163 115 2 260 421 493 652 3.22e-11 66.6
Msa0016710 AT5G16750.1 22.951 183 131 2 205 380 473 652 4.72e-11 66.2
Msa0016710 AT4G32551.2 25.668 187 133 5 238 423 703 884 7.88e-12 68.6
Msa0016710 AT4G32551.1 25.668 187 133 5 238 423 665 846 8.04e-12 68.6
Msa0016710 AT2G43770.1 25.362 276 161 11 259 511 46 299 1.21e-11 66.6
Msa0016710 AT2G43770.1 24.648 284 193 12 238 510 67 340 2.48e-11 65.9
Msa0016710 AT1G62020.1 23.913 230 139 7 234 430 61 287 5.92e-11 65.9

Find 129 sgRNAs with CRISPR-Local

Find 702 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACAATCGAATAGGATTT+TGG 0.107029 1_1:+27841402 Msa0016710:intron
GACTGCAATGCTGCTCTTTC+CGG 0.154596 1_1:+27844632 Msa0016710:CDS
GCATTAGCTGTCACAGAATT+TGG 0.171506 1_1:-27844329 None:intergenic
GACCGGAATCTTCGAATATT+TGG 0.195869 1_1:+27849150 Msa0016710:CDS
ACAGAATTTGGAGTAGAAAT+AGG 0.203246 1_1:-27844317 None:intergenic
TGGTTGACGAAGAAGAAATT+AGG 0.243745 1_1:-27838985 None:intergenic
CGAAGAAGAAATTAGGGTTT+TGG 0.243929 1_1:-27838978 None:intergenic
CATCCCGATGGTCTTATTCT+TGG 0.266936 1_1:+27847885 Msa0016710:CDS
AAAACTCTTCCTGATTTATC+TGG 0.271266 1_1:+27848949 Msa0016710:CDS
GTGCAGGCAGCAAGCATTCC+TGG 0.291861 1_1:+27841653 Msa0016710:CDS
TCTTGATATCCTTCATTCTA+AGG 0.302903 1_1:+27844935 Msa0016710:CDS
TTTGGGAAGTGTCCAGTTAC+AGG 0.305772 1_1:+27841420 Msa0016710:CDS
CGTGATTGCAAGGCTTAAAA+AGG 0.320139 1_1:+27844247 Msa0016710:CDS
TTTGACACCACAGGCTCATC+TGG 0.321677 1_1:-27839145 None:intergenic
GGATCCTACCTTGCAGTTGC+AGG 0.322521 1_1:+27848459 Msa0016710:CDS
ATTTCAGATTCCTGCGACTT+TGG 0.324712 1_1:+27844833 Msa0016710:intron
CAGATTCTCTTGTTAAGATC+TGG 0.328133 1_1:+27847919 Msa0016710:CDS
GTTGGAGTTGCTGAGTCATA+TGG 0.342835 1_1:-27848313 None:intergenic
CAGTTGCAGGCTCTGATGTT+AGG 0.348094 1_1:+27848472 Msa0016710:CDS
CTTGGTCTAATTTCATTTGT+TGG 0.349584 1_1:+27849261 Msa0016710:three_prime_UTR
GCAAATGTTGCTAAGTTTGA+TGG 0.357923 1_1:+27848057 Msa0016710:CDS
CTCCATAGTCTTGCCGATCC+AGG 0.359004 1_1:+27849214 Msa0016710:three_prime_UTR
GGAATGCTTGCTGCCTGCAC+TGG 0.360377 1_1:-27841650 None:intergenic
CTCATGATGGTGTAAAGCTT+TGG 0.362749 1_1:+27848254 Msa0016710:CDS
TCCCTGGATCGGCAAGACTA+TGG 0.362761 1_1:-27849216 None:intergenic
TTTGTGACTGCATCACTTGA+TGG 0.370664 1_1:+27847540 Msa0016710:CDS
TGCAGTCACAAAGTAATTAT+TGG 0.371362 1_1:-27847529 None:intergenic
CTTGCTGCCTGCACTGGTCT+AGG 0.374275 1_1:-27841644 None:intergenic
ACTGCAATGCTGCTCTTTCC+GGG 0.374696 1_1:+27844633 Msa0016710:CDS
GGATGTAATTTCTTCGCATT+AGG 0.388848 1_1:-27844575 None:intergenic
ACTTAGCGGTCACTCTAAAA+AGG 0.392563 1_1:+27845218 Msa0016710:CDS
AAGCGTGAAGTTTGTAGGTC+AGG 0.396085 1_1:+27845324 Msa0016710:CDS
CTTAAACAAAACTAGCAAAC+AGG 0.402528 1_1:+27844902 Msa0016710:CDS
CTTCCTGATTTATCTGGAAC+AGG 0.403899 1_1:+27848955 Msa0016710:CDS
CAGGGTGAATCTATCATAAC+TGG 0.405085 1_1:+27845343 Msa0016710:CDS
GGCCAAATATTCGAAGATTC+CGG 0.405806 1_1:-27849152 None:intergenic
GTAGTGTACTGGTGATAATA+TGG 0.407193 1_1:+27849559 Msa0016710:three_prime_UTR
AAATCCACATGTGTAAAATT+CGG 0.407717 1_1:+27849093 Msa0016710:CDS
GATATTGTGCCGATCAAAAC+AGG 0.410359 1_1:+27841462 Msa0016710:CDS
GTAAGCGGCTCTCCTGTAAC+TGG 0.411774 1_1:-27841432 None:intergenic
TCATGATGGTGTAAAGCTTT+GGG 0.421276 1_1:+27848255 Msa0016710:CDS
CTGCTTGCCGCGTGATTGCA+AGG 0.421314 1_1:+27844237 Msa0016710:CDS
TATTGCAGACAGTTCGTTTG+TGG 0.428520 1_1:+27845790 Msa0016710:intron
CTTCGAATATTTGGCCAACC+TGG 0.429124 1_1:+27849159 Msa0016710:CDS
ATTAATCGAGAGGCATATAA+TGG 0.430404 1_1:+27839195 Msa0016710:CDS
CATAACTGGTTCAGCAGATA+AGG 0.431703 1_1:+27845357 Msa0016710:CDS
GGTTGACGAAGAAGAAATTA+GGG 0.432978 1_1:-27838984 None:intergenic
TGTTAGCTCAGAAATTATAC+TGG 0.433157 1_1:-27844609 None:intergenic
ATACTTAGCAGTTGCATCAA+TGG 0.445405 1_1:+27849128 Msa0016710:CDS
TTACAGGACATAATCGCAAC+TGG 0.446375 1_1:+27845138 Msa0016710:intron
TGCTGCCTGCTATTAAAGCT+TGG 0.451598 1_1:+27849243 Msa0016710:three_prime_UTR
ATTATACTGGAAGATATTCC+AGG 0.453120 1_1:-27844596 None:intergenic
CAGAATTTGGAGTAGAAATA+GGG 0.462176 1_1:-27844316 None:intergenic
CTGCATCACTTGATGGCAGC+TGG 0.462700 1_1:+27847547 Msa0016710:CDS
TACAGGAGAGCCGCTTACTC+TGG 0.463440 1_1:+27841437 Msa0016710:CDS
TAGTGAGATAATGTAATTGT+TGG 0.464853 1_1:+27849472 Msa0016710:three_prime_UTR
AGATTCTCTTGTTAAGATCT+GGG 0.470622 1_1:+27847920 Msa0016710:CDS
GAGTCAATACCAGAGTTTGT+TGG 0.471796 1_1:-27848331 None:intergenic
GCAAGCATTCCTGGCATGCT+TGG 0.474027 1_1:+27841662 Msa0016710:CDS
GTAACAAGCGTGAAGTTTGT+AGG 0.474487 1_1:+27845319 Msa0016710:CDS
GTAGTATCCATTCTCAGAAA+AGG 0.476806 1_1:-27848106 None:intergenic
TAGCAGGCAGCAACTGTCCC+TGG 0.478831 1_1:-27849232 None:intergenic
TGAAGTCTGTATTGCCCTCT+CGG 0.481623 1_1:+27849425 Msa0016710:three_prime_UTR
ATGCTCCTGTTCATAGCAAT+GGG 0.482893 1_1:+27844348 Msa0016710:CDS
AGACAGTTCGTTTGTGGCAA+GGG 0.486431 1_1:+27845796 Msa0016710:intron
TTAGACCAAGCTTTAATAGC+AGG 0.486431 1_1:-27849248 None:intergenic
AGCTGCAGATGTATAGCCTT+CGG 0.487652 1_1:-27847859 None:intergenic
ATGCTGCTCTTTCCGGGAAG+AGG 0.487878 1_1:+27844639 Msa0016710:CDS
CTCATTTATAGGAATGGGAT+GGG 0.490049 1_1:+27841907 Msa0016710:intron
GATGGTCTTATTCTTGGAAC+TGG 0.491366 1_1:+27847891 Msa0016710:CDS
TTCACATACCATGGTGTATG+TGG 0.496836 1_1:+27849330 Msa0016710:three_prime_UTR
CAGACAGTTCGTTTGTGGCA+AGG 0.499376 1_1:+27845795 Msa0016710:intron
AAAGTAATACCTTAGAATGA+AGG 0.500411 1_1:-27844944 None:intergenic
AATGCTCCTGTTCATAGCAA+TGG 0.505400 1_1:+27844347 Msa0016710:CDS
TGGAACATTCCAAGCATGCC+AGG 0.505625 1_1:-27841671 None:intergenic
AGCTGCTGATGACGAGGAGT+TGG 0.507322 1_1:+27844550 Msa0016710:intron
CCTCATTTATAGGAATGGGA+TGG 0.507870 1_1:+27841906 Msa0016710:intron
TTGGAGTTGCTGAGTCATAT+GGG 0.509156 1_1:-27848312 None:intergenic
GTACCTGTTCCAGATAAATC+AGG 0.512887 1_1:-27848958 None:intergenic
AGTCATATGGGCCATAGTCC+CGG 0.517272 1_1:-27848300 None:intergenic
CAAAGTAATTATTGGTGGCA+TGG 0.525985 1_1:-27847521 None:intergenic
CTAAGTTTGATGGACATGTC+GGG 0.530267 1_1:+27848067 Msa0016710:CDS
GGCAGCAACTGTCCCTGGAT+CGG 0.530911 1_1:-27849227 None:intergenic
AGTGAAGCCTAGACCAGTGC+AGG 0.532479 1_1:+27841637 Msa0016710:CDS
AGCGTGAAGTTTGTAGGTCA+GGG 0.533196 1_1:+27845325 Msa0016710:CDS
AAAAGGAACGAGACGAAGCT+AGG 0.533326 1_1:+27844264 Msa0016710:CDS
TTGTCAGAAATATCTTCGCC+AGG 0.533777 1_1:-27849177 None:intergenic
GTTCCAAGAATAAGACCATC+GGG 0.534047 1_1:-27847888 None:intergenic
TAACTGCAAACAGATCTTGA+AGG 0.534904 1_1:+27845836 Msa0016710:CDS
AATTGTTGGCCATTGCTACC+AGG 0.534982 1_1:+27849486 Msa0016710:three_prime_UTR
GTTCATAGCAATGGGAAAAG+AGG 0.541436 1_1:+27844356 Msa0016710:CDS
TTGCAAATGTGAAATCTGAA+TGG 0.541920 1_1:+27848917 Msa0016710:CDS
CAGAAATATCTTCGCCAGGT+TGG 0.544143 1_1:-27849173 None:intergenic
GTAGCTAATACTTGTCCTGA+TGG 0.546408 1_1:-27845195 None:intergenic
TTGTGGCAAGGGTCAGATGA+TGG 0.550255 1_1:+27845807 Msa0016710:CDS
TCAACAGAAGCCAAAGTCGC+AGG 0.550956 1_1:-27844843 None:intergenic
TTCAGGAACTTGTCTGACTC+AGG 0.555913 1_1:+27847587 Msa0016710:CDS
AGCTAGGTCTATACTTGCAC+AGG 0.561984 1_1:+27844280 Msa0016710:CDS
TCCATAGTCTTGCCGATCCA+GGG 0.564581 1_1:+27849215 Msa0016710:three_prime_UTR
TAGGTTTCTGACTCTTCCGA+AGG 0.569370 1_1:+27847843 Msa0016710:intron
CTATACTTGCACAGGCAGAA+AGG 0.575588 1_1:+27844288 Msa0016710:CDS
TAGCAGTTGCATCAATGGAC+CGG 0.577692 1_1:+27849133 Msa0016710:CDS
TCAGCAACTCCAACAAACTC+TGG 0.577891 1_1:+27848322 Msa0016710:CDS
AGGCTCATCTGGAACCTCAC+CGG 0.580055 1_1:-27839134 None:intergenic
AGAGCCTGCAACTGCAAGGT+AGG 0.584256 1_1:-27848463 None:intergenic
GTTAAGTCATGCTCTATACC+AGG 0.586754 1_1:+27841983 Msa0016710:CDS
AATGCGAAGAAATTACATCC+TGG 0.591581 1_1:+27844578 Msa0016710:CDS
AGTCACAAAGTAATTATTGG+TGG 0.592605 1_1:-27847526 None:intergenic
GCTAAGTTTGATGGACATGT+CGG 0.592762 1_1:+27848066 Msa0016710:CDS
CAAGTATTAGCTACACTTAG+CGG 0.599082 1_1:+27845204 Msa0016710:CDS
AGTTCCAAGAATAAGACCAT+CGG 0.599921 1_1:-27847889 None:intergenic
CTAATACTTGTCCTGATGGA+CGG 0.602167 1_1:-27845191 None:intergenic
TGTACTGGTGATAATATGGA+AGG 0.616284 1_1:+27849563 Msa0016710:three_prime_UTR
CATCAGAGCCTGCAACTGCA+AGG 0.620846 1_1:-27848467 None:intergenic
TCGAGAAGAGATTAATCGAG+AGG 0.622459 1_1:+27839185 Msa0016710:CDS
ACATACACCATGGTATGTGA+AGG 0.629136 1_1:-27849328 None:intergenic
ACAATATCATCCAGAGTAAG+CGG 0.631161 1_1:-27841447 None:intergenic
AGCAGCAGTTGCATACAGCA+AGG 0.634251 1_1:+27841955 Msa0016710:CDS
TGATAGACCGCAGCTCATGA+TGG 0.652388 1_1:+27848241 Msa0016710:intron
TGTGCCGATCAAAACAGGCA+AGG 0.675176 1_1:+27841467 Msa0016710:CDS
TTAAACAAAACTAGCAAACA+GGG 0.680512 1_1:+27844903 Msa0016710:CDS
CTTTACACCATCATGAGCTG+CGG 0.684333 1_1:-27848248 None:intergenic
ATACCATGGTGTATGTGGAG+TGG 0.684790 1_1:+27849335 Msa0016710:three_prime_UTR
GCTCCACTCCACATACACCA+TGG 0.696162 1_1:-27849338 None:intergenic
GCAGTGGAGTTTGACCACAG+TGG 0.700459 1_1:+27848438 Msa0016710:intron
TGAGGTTCCAGATGAGCCTG+TGG 0.703744 1_1:+27839138 Msa0016710:CDS
TGAGAATGGATACTACCTTG+CGG 0.717359 1_1:+27848113 Msa0016710:CDS
TTAACTGGAGCAGTTCATCG+TGG 0.745700 1_1:-27839005 None:intergenic
CTGCAAGGTAGGATCCACTG+TGG 0.800585 1_1:-27848452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCCTATAATTTATAAT+TGG + chr1_1:27842102-27842121 Msa0016710:intron 10.0%
!! AAACCTTAATATATAAAAAT+AGG - chr1_1:27843436-27843455 None:intergenic 10.0%
!!! AGCAAAATATTTTTTAATTA+AGG + chr1_1:27844989-27845008 Msa0016710:intron 10.0%
!!! TTGTAAAATAATAAATGTTT+TGG + chr1_1:27846112-27846131 Msa0016710:intron 10.0%
!! ACTAATTTAATTGAAATATA+TGG - chr1_1:27846753-27846772 None:intergenic 10.0%
!! ATTATAAAAGAAAAAATGTT+CGG - chr1_1:27847614-27847633 None:intergenic 10.0%
!!! TTTTATTTTGAAATGATATT+TGG + chr1_1:27848028-27848047 Msa0016710:intron 10.0%
!! CAAAAAAAAAATCATTAATA+TGG + chr1_1:27848193-27848212 Msa0016710:intron 10.0%
!!! AAAATGGGATTTTTTTTTTT+TGG + chr1_1:27839431-27839450 Msa0016710:intron 15.0%
!!! TATTAGTTTTAGAACATTTT+GGG + chr1_1:27839842-27839861 Msa0016710:intron 15.0%
!!! TGTTTAAAATATAAAACGAT+AGG + chr1_1:27840562-27840581 Msa0016710:intron 15.0%
!! AGAAACCAATTATAAATTAT+AGG - chr1_1:27842110-27842129 None:intergenic 15.0%
!! ATTTAATAATGAAATTCAAG+AGG - chr1_1:27842182-27842201 None:intergenic 15.0%
!!! AAAATGATTTTTTTCTTTTC+TGG + chr1_1:27842203-27842222 Msa0016710:intron 15.0%
!! TAAAATTACAAAAAAGCAAT+AGG - chr1_1:27842443-27842462 None:intergenic 15.0%
!!! TAATTTTAATCCTTAGTTTT+TGG + chr1_1:27842455-27842474 Msa0016710:intron 15.0%
!!! TATTTTCTTCATATGAAAAT+TGG + chr1_1:27842724-27842743 Msa0016710:intron 15.0%
!! AAGAAAGTTATAAAGAATTA+TGG - chr1_1:27842862-27842881 None:intergenic 15.0%
!! TATATAAAATGAATCTCAAA+TGG - chr1_1:27843236-27843255 None:intergenic 15.0%
!!! ATTTTATATATTCTCAGATA+AGG + chr1_1:27843246-27843265 Msa0016710:intron 15.0%
!!! AACTCCTATTTTATATATTA+AGG + chr1_1:27843296-27843315 Msa0016710:intron 15.0%
!!! ACTCCTATTTTTATATATTA+AGG + chr1_1:27843430-27843449 Msa0016710:intron 15.0%
!! TTAAGATAATAACTAATCAA+AGG + chr1_1:27843741-27843760 Msa0016710:intron 15.0%
!! TAAGATAATAACTAATCAAA+GGG + chr1_1:27843742-27843761 Msa0016710:intron 15.0%
!!! TTTTGATTAAAAAAAAAGAC+AGG + chr1_1:27843786-27843805 Msa0016710:intron 15.0%
!! AAAACTAAAATTAACAACTA+GGG - chr1_1:27844201-27844220 None:intergenic 15.0%
!! TAAAACTAAAATTAACAACT+AGG - chr1_1:27844202-27844221 None:intergenic 15.0%
!!! TGTAATTTCAAATTTTTCAA+AGG - chr1_1:27844753-27844772 None:intergenic 15.0%
!! TCTATTTATAAATTCTTATC+AGG - chr1_1:27847077-27847096 None:intergenic 15.0%
!! TGATAAGAATTTATAAATAG+AGG + chr1_1:27847076-27847095 Msa0016710:intron 15.0%
!!! CACCAAATTTAATTTAAATT+GGG - chr1_1:27847144-27847163 None:intergenic 15.0%
!!! TCTTTTTTTAAAAAAACTTG+AGG + chr1_1:27847277-27847296 Msa0016710:intron 15.0%
!! CAAAAATCAATATAATTCTT+CGG - chr1_1:27848822-27848841 None:intergenic 15.0%
!!! AATTTTGTGAATAGTAGTTT+AGG + chr1_1:27839260-27839279 Msa0016710:intron 20.0%
!!! ATTTTGTGAATAGTAGTTTA+GGG + chr1_1:27839261-27839280 Msa0016710:intron 20.0%
!! TGAATTTGTGAACAATAATT+AGG + chr1_1:27839344-27839363 Msa0016710:intron 20.0%
!! GAATTTGTGAACAATAATTA+GGG + chr1_1:27839345-27839364 Msa0016710:intron 20.0%
!!! GTATTAGTTTTAGAACATTT+TGG + chr1_1:27839841-27839860 Msa0016710:intron 20.0%
!!! TCCATTACAAATTTTTAGTT+GGG - chr1_1:27840427-27840446 None:intergenic 20.0%
!!! TTCCATTACAAATTTTTAGT+TGG - chr1_1:27840428-27840447 None:intergenic 20.0%
!!! TAATATACCGAATTTTGTAT+TGG + chr1_1:27840527-27840546 Msa0016710:intron 20.0%
!!! TCAAAATTCAAATCACATTT+TGG - chr1_1:27840600-27840619 None:intergenic 20.0%
!! ATAGAATATGATTACACAAT+AGG + chr1_1:27840674-27840693 Msa0016710:intron 20.0%
!!! TATGCAGTTGTTATTTTATT+AGG - chr1_1:27840906-27840925 None:intergenic 20.0%
!!! AGCATATATGAATTATGTTT+TGG + chr1_1:27841106-27841125 Msa0016710:intron 20.0%
!!! GCATATATGAATTATGTTTT+GGG + chr1_1:27841107-27841126 Msa0016710:intron 20.0%
!!! AAATGTTTTTGTTATGCAAT+AGG + chr1_1:27841277-27841296 Msa0016710:intron 20.0%
!!! TAGTTTTCATGATATTTTTC+AGG + chr1_1:27841325-27841344 Msa0016710:intron 20.0%
!!! TTCTATACATACATACATTT+TGG - chr1_1:27841694-27841713 None:intergenic 20.0%
!! ATTTATAAGTTAATTGTTCC+AGG + chr1_1:27841783-27841802 Msa0016710:intron 20.0%
!!! AAATTTTTTCCCTCATTTAT+AGG + chr1_1:27841896-27841915 Msa0016710:intron 20.0%
!!! TGTAGAAGATAATAATTTGT+TGG - chr1_1:27842031-27842050 None:intergenic 20.0%
!! TATAGGAAATATTAATAACC+CGG - chr1_1:27842093-27842112 None:intergenic 20.0%
!! AAAACATGAAGAAAATTGAT+TGG - chr1_1:27842627-27842646 None:intergenic 20.0%
!! TGATTGAGAAGAAAATATAT+TGG - chr1_1:27842656-27842675 None:intergenic 20.0%
!!! TATTTTCTTCTCAATCAATT+TGG + chr1_1:27842659-27842678 Msa0016710:intron 20.0%
!! AAATAGTGAAAAATCGTAAA+TGG - chr1_1:27842709-27842728 None:intergenic 20.0%
!! AAAAAAATTGTCCAGAAAAT+CGG - chr1_1:27842838-27842857 None:intergenic 20.0%
!!! ATTTTATTCTATCATGTGTT+TGG - chr1_1:27843045-27843064 None:intergenic 20.0%
!! ATTAGAAAATGGATAAAGAT+AGG - chr1_1:27843142-27843161 None:intergenic 20.0%
!! TACGCCTTAATATATAAAAT+AGG - chr1_1:27843303-27843322 None:intergenic 20.0%
!!! TCTTTTACTATTGGAAAATA+AGG + chr1_1:27843379-27843398 Msa0016710:intron 20.0%
!! AAGATAATAACTAATCAAAG+GGG + chr1_1:27843743-27843762 Msa0016710:intron 20.0%
!! TAAGTCAAACAAATGAAAAA+AGG - chr1_1:27844053-27844072 None:intergenic 20.0%
!!! GAAAATTTGAAATCATTATC+AGG - chr1_1:27844147-27844166 None:intergenic 20.0%
!! ACTTTAAACTCTAATGTTTA+GGG - chr1_1:27844438-27844457 None:intergenic 20.0%
!! AAAGTAATACCTTAGAATAA+AGG - chr1_1:27845033-27845052 None:intergenic 20.0%
!!! TATCCCTTTCTAATTTTATA+AGG + chr1_1:27845388-27845407 Msa0016710:intron 20.0%
!! CTACCTTATAAAATTAGAAA+GGG - chr1_1:27845394-27845413 None:intergenic 20.0%
!! ACTACCTTATAAAATTAGAA+AGG - chr1_1:27845395-27845414 None:intergenic 20.0%
!!! TCTAATTTTATAAGGTAGTT+TGG + chr1_1:27845396-27845415 Msa0016710:intron 20.0%
!!! AAAATATCAAGTGTGAATTT+TGG - chr1_1:27845611-27845630 None:intergenic 20.0%
!!! TCAAATTCACAATTTTAAGA+CGG - chr1_1:27845708-27845727 None:intergenic 20.0%
!! AAAAGATTTATAGACCATTA+GGG - chr1_1:27845760-27845779 None:intergenic 20.0%
!! TAAAAGATTTATAGACCATT+AGG - chr1_1:27845761-27845780 None:intergenic 20.0%
!! ACAAGAAACAATGAAAAATT+AGG - chr1_1:27845903-27845922 None:intergenic 20.0%
!!! ATAAAACTTGATTGTCTTTT+TGG + chr1_1:27846065-27846084 Msa0016710:intron 20.0%
!!! TAAAACTTGATTGTCTTTTT+GGG + chr1_1:27846066-27846085 Msa0016710:intron 20.0%
!!! AACAGACTTTAAAACATTTT+TGG + chr1_1:27846608-27846627 Msa0016710:intron 20.0%
!!! TTTTAGCAAAAGTTTGTTTT+GGG + chr1_1:27846659-27846678 Msa0016710:intron 20.0%
!!! TGCATTTAAAATAAAACTGT+CGG - chr1_1:27846952-27846971 None:intergenic 20.0%
!!! GTTTTGGTATACAAATTATT+GGG + chr1_1:27847021-27847040 Msa0016710:intron 20.0%
!!! CCACCAAATTTAATTTAAAT+TGG - chr1_1:27847145-27847164 None:intergenic 20.0%
!! CCAATTTAAATTAAATTTGG+TGG + chr1_1:27847142-27847161 Msa0016710:intron 20.0%
!! ATTCTAGTATGTAAATAGTA+GGG - chr1_1:27848374-27848393 None:intergenic 20.0%
!! TATTCTAGTATGTAAATAGT+AGG - chr1_1:27848375-27848394 None:intergenic 20.0%
!! AATATTGTACCTATTTCATA+AGG + chr1_1:27848391-27848410 Msa0016710:intron 20.0%
!! TAAATCATTACCAATCTAAA+GGG - chr1_1:27848790-27848809 None:intergenic 20.0%
!! TTAAATCATTACCAATCTAA+AGG - chr1_1:27848791-27848810 None:intergenic 20.0%
!!! CGAAGAATTATATTGATTTT+TGG + chr1_1:27848820-27848839 Msa0016710:intron 20.0%
!! CAGGAATAATAATAATAGAT+AGG - chr1_1:27849003-27849022 None:intergenic 20.0%
! GTTTAATTGAGAAATTGAAG+TGG + chr1_1:27839406-27839425 Msa0016710:intron 25.0%
! AGAAATTGAAGTGGATAAAA+TGG + chr1_1:27839415-27839434 Msa0016710:intron 25.0%
! GAAATTGAAGTGGATAAAAT+GGG + chr1_1:27839416-27839435 Msa0016710:intron 25.0%
! AAAAATAAGCCAATCCAAAT+GGG - chr1_1:27839479-27839498 None:intergenic 25.0%
!! TAATGAAGATACAATTTTCG+TGG - chr1_1:27839566-27839585 None:intergenic 25.0%
! CCTAAAATGAACTAAACTAT+GGG - chr1_1:27839682-27839701 None:intergenic 25.0%
! ACCTAAAATGAACTAAACTA+TGG - chr1_1:27839683-27839702 None:intergenic 25.0%
! TTAAAGCGAGACAATATTTA+AGG + chr1_1:27840123-27840142 Msa0016710:intron 25.0%
!!! TTCTTTTCTCTTTGTTGTAT+CGG + chr1_1:27840270-27840289 Msa0016710:intron 25.0%
!! CTATTTAAAGTGTTTAGTAG+TGG + chr1_1:27840387-27840406 Msa0016710:intron 25.0%
! TCCCAACTAAAAATTTGTAA+TGG + chr1_1:27840423-27840442 Msa0016710:intron 25.0%
! CCTAAAACCAATACAAAATT+CGG - chr1_1:27840537-27840556 None:intergenic 25.0%
!!! TTCTATTCTGTTTCTATGTT+CGG - chr1_1:27840635-27840654 None:intergenic 25.0%
! ACAAGTTACTGGATAAATAA+GGG - chr1_1:27840813-27840832 None:intergenic 25.0%
! AACAAGTTACTGGATAAATA+AGG - chr1_1:27840814-27840833 None:intergenic 25.0%
!! ATTAGGAACAGTTATGTTTT+AGG - chr1_1:27840849-27840868 None:intergenic 25.0%
! TATGTTTATGTCCTATCTAT+CGG + chr1_1:27841040-27841059 Msa0016710:intron 25.0%
! TATGTTTATGTCCTATCTAT+AGG + chr1_1:27841040-27841059 Msa0016710:intron 25.0%
! TATCGTTGAATGAAAGAAAA+TGG + chr1_1:27841190-27841209 Msa0016710:intron 25.0%
! ATCGTTGAATGAAAGAAAAT+GGG + chr1_1:27841191-27841210 Msa0016710:intron 25.0%
! TTTGTTGAAAACAATCGAAT+AGG + chr1_1:27841395-27841414 Msa0016710:intron 25.0%
!! AAAACAATCGAATAGGATTT+TGG + chr1_1:27841402-27841421 Msa0016710:intron 25.0%
!! AAACAATCGAATAGGATTTT+GGG + chr1_1:27841403-27841422 Msa0016710:intron 25.0%
! ATAGGAAAATAAAAGAACCA+CGG - chr1_1:27841571-27841590 None:intergenic 25.0%
!! TTTGCAGTTTGATAATTATC+AGG + chr1_1:27841596-27841615 Msa0016710:intron 25.0%
! TGTATGTATGTATAGAATTG+AGG + chr1_1:27841697-27841716 Msa0016710:intron 25.0%
! AGGCTTACAATATTGATATA+CGG + chr1_1:27841717-27841736 Msa0016710:intron 25.0%
! TAATTGTTCCAGGAATTTAA+TGG + chr1_1:27841793-27841812 Msa0016710:intron 25.0%
!! AATATTAATAACCCGGTTTT+AGG - chr1_1:27842086-27842105 None:intergenic 25.0%
! AATAATGAAATTCAAGAGGA+TGG - chr1_1:27842178-27842197 None:intergenic 25.0%
!!! TCTATATCTCTTAGCTTTTA+CGG + chr1_1:27842300-27842319 Msa0016710:intron 25.0%
! AATAGGATAGGATAAGTAAT+AGG - chr1_1:27842426-27842445 None:intergenic 25.0%
! TTACAAAAAAGCAATAGGAT+AGG - chr1_1:27842438-27842457 None:intergenic 25.0%
!!! TTTTAATCCTTAGTTTTTGG+TGG + chr1_1:27842458-27842477 Msa0016710:intron 25.0%
!!! TTTAATCCTTAGTTTTTGGT+GGG + chr1_1:27842459-27842478 Msa0016710:intron 25.0%
! TTGAGAAGAAAATATATTGG+AGG - chr1_1:27842653-27842672 None:intergenic 25.0%
! AATCGTAATTCAGAAAGATT+GGG - chr1_1:27842897-27842916 None:intergenic 25.0%
! AAATCGTAATTCAGAAAGAT+TGG - chr1_1:27842898-27842917 None:intergenic 25.0%
! CACACATAATTAAATCGATT+GGG - chr1_1:27842988-27843007 None:intergenic 25.0%
! ACACACATAATTAAATCGAT+TGG - chr1_1:27842989-27843008 None:intergenic 25.0%
!! GTTGCAATTTCTTTTACTAT+TGG + chr1_1:27843504-27843523 Msa0016710:intron 25.0%
! TATATCTTATCATCTTGTTG+AGG + chr1_1:27844382-27844401 Msa0016710:intron 25.0%
! TTTAAACTCTAATGTTTAGG+GGG - chr1_1:27844436-27844455 None:intergenic 25.0%
! CTTTAAACTCTAATGTTTAG+GGG - chr1_1:27844437-27844456 None:intergenic 25.0%
! CACTTTAAACTCTAATGTTT+AGG - chr1_1:27844439-27844458 None:intergenic 25.0%
!!! TGTTTGCTAGTTTTGTTTAA+GGG - chr1_1:27844903-27844922 None:intergenic 25.0%
! TTAAACAAAACTAGCAAACA+GGG + chr1_1:27844903-27844922 Msa0016710:CDS 25.0%
! AAAGTAATACCTTAGAATGA+AGG - chr1_1:27844947-27844966 None:intergenic 25.0%
! TCTTGATATCCTTTATTCTA+AGG + chr1_1:27845021-27845040 Msa0016710:intron 25.0%
!!! CTTATTTTAGTTGGAATTGA+AGG + chr1_1:27845246-27845265 Msa0016710:intron 25.0%
! TAGTTCACATATAAATTCAC+AGG - chr1_1:27845582-27845601 None:intergenic 25.0%
! GTGAATTTATATGTGAACTA+TGG + chr1_1:27845582-27845601 Msa0016710:intron 25.0%
! TCTTTATCCTACTTGTAATT+CGG + chr1_1:27845926-27845945 Msa0016710:intron 25.0%
!! AAAACTTGATTGTCTTTTTG+GGG + chr1_1:27846067-27846086 Msa0016710:intron 25.0%
!! AATGAAAAGTTTCCTTTTTG+AGG - chr1_1:27846196-27846215 None:intergenic 25.0%
! ATCATAATGTTAAGGAGTTA+AGG - chr1_1:27846269-27846288 None:intergenic 25.0%
!!! CTTTAAAACATTTTTGGTTG+TGG + chr1_1:27846614-27846633 Msa0016710:intron 25.0%
!! AACAAACTTTTGCTAAAACA+TGG - chr1_1:27846657-27846676 None:intergenic 25.0%
!!! GTTTTAGCAAAAGTTTGTTT+TGG + chr1_1:27846658-27846677 Msa0016710:intron 25.0%
!! GCATTTAAAATAAAACTGTC+GGG - chr1_1:27846951-27846970 None:intergenic 25.0%
!!! GGTTTTGGTATACAAATTAT+TGG + chr1_1:27847020-27847039 Msa0016710:intron 25.0%
! GGCCCAATTTAAATTAAATT+TGG + chr1_1:27847139-27847158 Msa0016710:intron 25.0%
! AAAACATCAAATTGTAGTGA+AGG - chr1_1:27847228-27847247 None:intergenic 25.0%
! TAGCAGGTTTATCATTAATA+TGG + chr1_1:27848161-27848180 Msa0016710:intron 25.0%
! AGGTACAATAAATTAGTTCA+AGG - chr1_1:27848872-27848891 None:intergenic 25.0%
! CAATAAATACTAGATGTGTA+TGG - chr1_1:27849028-27849047 None:intergenic 25.0%
!!! AACTTGAACCATTTATTTTC+AGG + chr1_1:27849069-27849088 Msa0016710:intron 25.0%
! TGGATTTACCTGAAAATAAA+TGG - chr1_1:27849080-27849099 None:intergenic 25.0%
! AAATCCACATGTGTAAAATT+CGG + chr1_1:27849093-27849112 Msa0016710:CDS 25.0%
! TGGAGCAAAAAATATATTCA+AGG + chr1_1:27849355-27849374 Msa0016710:three_prime_UTR 25.0%
! TAGTGAGATAATGTAATTGT+TGG + chr1_1:27849472-27849491 Msa0016710:three_prime_UTR 25.0%
! GAAGAAGAAATTAGGGTTTT+GGG - chr1_1:27838980-27838999 None:intergenic 30.0%
TAGAGGAAGAAGAAATTAAC+TGG - chr1_1:27839023-27839042 None:intergenic 30.0%
!! GCGATTTGTTTTTCTCTTTT+TGG + chr1_1:27839098-27839117 Msa0016710:intron 30.0%
!!! TTTTGGTTTTTTGCAGTTTC+CGG + chr1_1:27839115-27839134 Msa0016710:intron 30.0%
! ATTAATCGAGAGGCATATAA+TGG + chr1_1:27839195-27839214 Msa0016710:CDS 30.0%
TCACAAAATTGAACTGCAAA+AGG - chr1_1:27839250-27839269 None:intergenic 30.0%
!!! TTTTTTTGGTGAGTGTCTTT+TGG + chr1_1:27839445-27839464 Msa0016710:intron 30.0%
CAAAAATAAGCCAATCCAAA+TGG - chr1_1:27839480-27839499 None:intergenic 30.0%
GTATTGTTCATAAGCTTGTA+AGG - chr1_1:27839608-27839627 None:intergenic 30.0%
AAAAATAAGCCAATCCAAAC+AGG + chr1_1:27839656-27839675 Msa0016710:intron 30.0%
!! CCCATAGTTTAGTTCATTTT+AGG + chr1_1:27839679-27839698 Msa0016710:intron 30.0%
!!! CATTTTAGGTTGAAAGTGTT+CGG + chr1_1:27839693-27839712 Msa0016710:intron 30.0%
! TAGGCAACTCAAATTTTAGA+TGG + chr1_1:27839759-27839778 Msa0016710:intron 30.0%
! TCAAATTTTAGATGGAGTGT+TGG + chr1_1:27839767-27839786 Msa0016710:intron 30.0%
!! CAAATTTTAGATGGAGTGTT+GGG + chr1_1:27839768-27839787 Msa0016710:intron 30.0%
!!! TAGTTTTAGAACATTTTGGG+TGG + chr1_1:27839845-27839864 Msa0016710:intron 30.0%
! TGGTATTGTAACTAGTTTGA+AGG + chr1_1:27839876-27839895 Msa0016710:intron 30.0%
TTTCCATGTTTCATAGTTGT+CGG + chr1_1:27840034-27840053 Msa0016710:intron 30.0%
CCTAATACCAATACAAAAGT+CGG - chr1_1:27840178-27840197 None:intergenic 30.0%
! TGTATTGGTATTAGGAGATT+AGG + chr1_1:27840183-27840202 Msa0016710:intron 30.0%
TATTAGGAGATTAGGAGATT+AGG + chr1_1:27840191-27840210 Msa0016710:intron 30.0%
! TTTTGGTGAATGAAAGAAAG+TGG + chr1_1:27840300-27840319 Msa0016710:intron 30.0%
TTTGGTGAATGAAAGAAAGT+GGG + chr1_1:27840301-27840320 Msa0016710:intron 30.0%
TATTAGTTATGCTGATGTCT+CGG - chr1_1:27840500-27840519 None:intergenic 30.0%
!!! CCGAATTTTGTATTGGTTTT+AGG + chr1_1:27840534-27840553 Msa0016710:intron 30.0%
!!! TTTTATTGGGGTCTTGTTAT+TGG - chr1_1:27840765-27840784 None:intergenic 30.0%
! ATGTCGATAGGCATTTTATT+GGG - chr1_1:27840778-27840797 None:intergenic 30.0%
! AATGTCGATAGGCATTTTAT+TGG - chr1_1:27840779-27840798 None:intergenic 30.0%
ATGTGTAGCAGTTATGTATT+AGG - chr1_1:27840866-27840885 None:intergenic 30.0%
AACATAATTCACCGATAGAT+AGG - chr1_1:27841054-27841073 None:intergenic 30.0%
CTTTCAAATCTCCTATAGAT+AGG - chr1_1:27841082-27841101 None:intergenic 30.0%
!!! GAATTATGTTTTGGGAGATT+TGG + chr1_1:27841115-27841134 Msa0016710:intron 30.0%
TCTTTCATTCAACGATAGAT+AGG - chr1_1:27841187-27841206 None:intergenic 30.0%
TCGTTGAATGAAAGAAAATG+GGG + chr1_1:27841192-27841211 Msa0016710:intron 30.0%
ATCAAACTGCAAATACACAT+AGG - chr1_1:27841589-27841608 None:intergenic 30.0%
! AAGTTTTCCTGACAAATACT+TGG + chr1_1:27841830-27841849 Msa0016710:intron 30.0%
! TTTTCCCTCATTTATAGGAA+TGG + chr1_1:27841901-27841920 Msa0016710:intron 30.0%
TTTCCCTCATTTATAGGAAT+GGG + chr1_1:27841902-27841921 Msa0016710:intron 30.0%
! GATGCTATCTAATTTTGCAT+TGG + chr1_1:27841932-27841951 Msa0016710:CDS 30.0%
! ATAATTTTGTTACCCTTACC+TGG - chr1_1:27842004-27842023 None:intergenic 30.0%
GCAAAAATATTCCACCAATT+GGG - chr1_1:27842061-27842080 None:intergenic 30.0%
TGCAAAAATATTCCACCAAT+TGG - chr1_1:27842062-27842081 None:intergenic 30.0%
!! ATATTTTTGCAGCCTAAAAC+CGG + chr1_1:27842071-27842090 Msa0016710:intron 30.0%
GAAAACTTACACTAACGAAT+CGG - chr1_1:27842156-27842175 None:intergenic 30.0%
GTACATTATCATGTTGTGAT+GGG - chr1_1:27842233-27842252 None:intergenic 30.0%
! CATCACAACATGATAATGTA+CGG + chr1_1:27842232-27842251 Msa0016710:intron 30.0%
! ATCACAACATGATAATGTAC+GGG + chr1_1:27842233-27842252 Msa0016710:intron 30.0%
!! TTTGATAGCTTTATGCTATC+AGG - chr1_1:27842492-27842511 None:intergenic 30.0%
! GATTGGAATTGATATCGATT+GGG - chr1_1:27842610-27842629 None:intergenic 30.0%
TGATTGGAATTGATATCGAT+TGG - chr1_1:27842611-27842630 None:intergenic 30.0%
AAAATGATTGGAGTAACACT+GGG - chr1_1:27842788-27842807 None:intergenic 30.0%
AAAAATGATTGGAGTAACAC+TGG - chr1_1:27842789-27842808 None:intergenic 30.0%
GTTGCACAAAACATAACATT+GGG - chr1_1:27842816-27842835 None:intergenic 30.0%
CATTTATCCTATCATGTGTT+TGG - chr1_1:27843098-27843117 None:intergenic 30.0%
CACATGATAGGATTAGAAAA+TGG - chr1_1:27843153-27843172 None:intergenic 30.0%
TGATATGATAGACACATGAT+AGG - chr1_1:27843165-27843184 None:intergenic 30.0%
! GTTGCGATTTCTTTTACTAT+TGG + chr1_1:27843370-27843389 Msa0016710:intron 30.0%
TACACATTACAACTAAGTAC+AGG + chr1_1:27843815-27843834 Msa0016710:intron 30.0%
!! GAAGTTGGAGAGTATTTAAA+TGG + chr1_1:27843839-27843858 Msa0016710:intron 30.0%
!!! TAAATGGCGAGAAGTTTTTT+TGG + chr1_1:27843855-27843874 Msa0016710:intron 30.0%
TCAAGATAAGAAATCATACC+AGG - chr1_1:27844112-27844131 None:intergenic 30.0%
ACTAAAATTAACAACTAGGG+CGG - chr1_1:27844198-27844217 None:intergenic 30.0%
! CAGAATTTGGAGTAGAAATA+GGG - chr1_1:27844319-27844338 None:intergenic 30.0%
! ACAGAATTTGGAGTAGAAAT+AGG - chr1_1:27844320-27844339 None:intergenic 30.0%
ATTATACTGGAAGATATTCC+AGG - chr1_1:27844599-27844618 None:intergenic 30.0%
TGTTAGCTCAGAAATTATAC+TGG - chr1_1:27844612-27844631 None:intergenic 30.0%
!!! CTGTTTGCTAGTTTTGTTTA+AGG - chr1_1:27844904-27844923 None:intergenic 30.0%
CTTAAACAAAACTAGCAAAC+AGG + chr1_1:27844902-27844921 Msa0016710:CDS 30.0%
TCTTGATATCCTTCATTCTA+AGG + chr1_1:27844935-27844954 Msa0016710:CDS 30.0%
! ATCAACTTATTCCGTTTTAC+AGG + chr1_1:27845122-27845141 Msa0016710:intron 30.0%
CACATATAAATTCACAGGTT+TGG - chr1_1:27845577-27845596 None:intergenic 30.0%
AATGCAAATGTAAATCGCAA+GGG - chr1_1:27845639-27845658 None:intergenic 30.0%
AAATGCAAATGTAAATCGCA+AGG - chr1_1:27845640-27845659 None:intergenic 30.0%
TCAACAGACACATCTATTAT+GGG - chr1_1:27845668-27845687 None:intergenic 30.0%
TTCAACAGACACATCTATTA+TGG - chr1_1:27845669-27845688 None:intergenic 30.0%
! TGCAAAACTACATCTTTTCA+GGG - chr1_1:27845735-27845754 None:intergenic 30.0%
! ATGCAAAACTACATCTTTTC+AGG - chr1_1:27845736-27845755 None:intergenic 30.0%
AAAAATTAGGAACAGCAATG+TGG - chr1_1:27845890-27845909 None:intergenic 30.0%
TTTCATACCGAATTACAAGT+AGG - chr1_1:27845936-27845955 None:intergenic 30.0%
TTCGGTATGAAATTGAATCT+TGG + chr1_1:27845944-27845963 Msa0016710:intron 30.0%
TCGGTATGAAATTGAATCTT+GGG + chr1_1:27845945-27845964 Msa0016710:intron 30.0%
!! TTTATCCTACTTGTTGTACT+AGG - chr1_1:27846050-27846069 None:intergenic 30.0%
ATAATGTTAAGGAGTTAAGG+AGG - chr1_1:27846266-27846285 None:intergenic 30.0%
CTCCTTAACATTATGATAAC+AGG + chr1_1:27846272-27846291 Msa0016710:intron 30.0%
AGCCTGTTATCATAATGTTA+AGG - chr1_1:27846277-27846296 None:intergenic 30.0%
TTATGATAACAGGCTTATTC+AGG + chr1_1:27846282-27846301 Msa0016710:intron 30.0%
AGACTTGTAAAAGTTAACTG+TGG - chr1_1:27846324-27846343 None:intergenic 30.0%
AATATGGTAAGTGGTCTAAT+TGG - chr1_1:27846526-27846545 None:intergenic 30.0%
!!! AAACATTTTTGGTTGTGGAT+TGG + chr1_1:27846619-27846638 Msa0016710:intron 30.0%
!!! AACATTTTTGGTTGTGGATT+GGG + chr1_1:27846620-27846639 Msa0016710:intron 30.0%
AATCGTTCAAATTCTGATTC+AGG - chr1_1:27846899-27846918 None:intergenic 30.0%
TTATCTTCAATCCAAGAATC+AGG + chr1_1:27847315-27847334 Msa0016710:intron 30.0%
GTTTATGAAATCCTGATTCT+TGG - chr1_1:27847329-27847348 None:intergenic 30.0%
GTCAAGAATAGCAATCATAA+AGG - chr1_1:27847360-27847379 None:intergenic 30.0%
AGTCACAAAGTAATTATTGG+TGG - chr1_1:27847529-27847548 None:intergenic 30.0%
TGCAGTCACAAAGTAATTAT+TGG - chr1_1:27847532-27847551 None:intergenic 30.0%
! TGCTTTTATGAACTATCTTC+AGG + chr1_1:27847570-27847589 Msa0016710:CDS 30.0%
! ATTGATTCATAAGTGTCTTG+TGG + chr1_1:27847643-27847662 Msa0016710:intron 30.0%
!! TAGAGGTGTCTAAAAGAATA+CGG + chr1_1:27847676-27847695 Msa0016710:intron 30.0%
! GACAATGATTTGGCATTTAT+AGG + chr1_1:27847824-27847843 Msa0016710:intron 30.0%
AGATTCTCTTGTTAAGATCT+GGG + chr1_1:27847920-27847939 Msa0016710:CDS 30.0%
TTGAAATGATATTTGGTTGC+AGG + chr1_1:27848035-27848054 Msa0016710:intron 30.0%
AAAATGTAACCAGTATTAGC+AGG + chr1_1:27848145-27848164 Msa0016710:intron 30.0%
AATGATAAACCTGCTAATAC+TGG - chr1_1:27848157-27848176 None:intergenic 30.0%
AGATGAAGACCTTATGAAAT+AGG - chr1_1:27848403-27848422 None:intergenic 30.0%
TAATTCTTTGTATCTTGCAG+TGG + chr1_1:27848422-27848441 Msa0016710:intron 30.0%
!!! AAGTTGTTTTTGCATAGCTT+AGG + chr1_1:27848644-27848663 Msa0016710:intron 30.0%
!!! AGTTGTTTTTGCATAGCTTA+GGG + chr1_1:27848645-27848664 Msa0016710:intron 30.0%
TTGGGTAAACATTTGATCAA+TGG - chr1_1:27848764-27848783 None:intergenic 30.0%
!! TACCAATCTAAAGGGTATTT+GGG - chr1_1:27848782-27848801 None:intergenic 30.0%
!! TTACCAATCTAAAGGGTATT+TGG - chr1_1:27848783-27848802 None:intergenic 30.0%
TTAGTTCAAGGAAAGACTAA+TGG - chr1_1:27848860-27848879 None:intergenic 30.0%
TTGCAAATGTGAAATCTGAA+TGG + chr1_1:27848917-27848936 Msa0016710:CDS 30.0%
AAAACTCTTCCTGATTTATC+TGG + chr1_1:27848949-27848968 Msa0016710:CDS 30.0%
!! CTGCTAAGTATTTTGAATCT+GGG - chr1_1:27849119-27849138 None:intergenic 30.0%
!! ACTGCTAAGTATTTTGAATC+TGG - chr1_1:27849120-27849139 None:intergenic 30.0%
CTTGGTCTAATTTCATTTGT+TGG + chr1_1:27849261-27849280 Msa0016710:three_prime_UTR 30.0%
ACGTTAAAAATTATCCGAGA+GGG - chr1_1:27849442-27849461 None:intergenic 30.0%
TGTCTAACAACAAAAATTCC+TGG - chr1_1:27849507-27849526 None:intergenic 30.0%
!!! CTTTTTAACTTGTAGTGTAC+TGG + chr1_1:27849548-27849567 Msa0016710:three_prime_UTR 30.0%
! TTCTACACTTCGTTTTCTCT+CGG + chr1_1:27838926-27838945 Msa0016710:five_prime_UTR 35.0%
!!! GAAATTAGGGTTTTGGGTTT+TGG - chr1_1:27838974-27838993 None:intergenic 35.0%
! CGAAGAAGAAATTAGGGTTT+TGG - chr1_1:27838981-27839000 None:intergenic 35.0%
GGTTGACGAAGAAGAAATTA+GGG - chr1_1:27838987-27839006 None:intergenic 35.0%
TGGTTGACGAAGAAGAAATT+AGG - chr1_1:27838988-27839007 None:intergenic 35.0%
GAAACGAAAGAAGAGAATAG+AGG - chr1_1:27839040-27839059 None:intergenic 35.0%
! AATAGTAGTTTAGGGTAGAG+AGG + chr1_1:27839269-27839288 Msa0016710:intron 35.0%
! TTTAGGGTAGAGAGGTAATT+TGG + chr1_1:27839277-27839296 Msa0016710:intron 35.0%
TTAGGGTAGAGAGGTAATTT+GGG + chr1_1:27839278-27839297 Msa0016710:intron 35.0%
AGGTAATTTGGGAATCGTAA+TGG + chr1_1:27839289-27839308 Msa0016710:intron 35.0%
! TAATTAGGGATTAGCGTGTT+AGG + chr1_1:27839359-27839378 Msa0016710:intron 35.0%
! AATTAGGGATTAGCGTGTTA+GGG + chr1_1:27839360-27839379 Msa0016710:intron 35.0%
! GTGAGTGTCTTTTGGTATTA+GGG + chr1_1:27839453-27839472 Msa0016710:intron 35.0%
TCGGTCATTTATGTTCTTCA+AGG + chr1_1:27839712-27839731 Msa0016710:intron 35.0%
CGGTCATTTATGTTCTTCAA+GGG + chr1_1:27839713-27839732 Msa0016710:intron 35.0%
!! CATTTTGGGTGGAAAATGTT+TGG + chr1_1:27839856-27839875 Msa0016710:intron 35.0%
GTAGTAGAAACAAATAGCGT+CGG + chr1_1:27839903-27839922 Msa0016710:intron 35.0%
!!! CGGCAATTCGAAGTTTTAAA+TGG + chr1_1:27840054-27840073 Msa0016710:intron 35.0%
AAGTCCAAAATTCCAGTCAT+GGG - chr1_1:27840095-27840114 None:intergenic 35.0%
AAAGTCCAAAATTCCAGTCA+TGG - chr1_1:27840096-27840115 None:intergenic 35.0%
!! CCGACTTTTGTATTGGTATT+AGG + chr1_1:27840175-27840194 Msa0016710:intron 35.0%
GTGAAAGCTAAAGGCTAATT+TGG + chr1_1:27840222-27840241 Msa0016710:intron 35.0%
TTGGTGAATGAAAGAAAGTG+GGG + chr1_1:27840302-27840321 Msa0016710:intron 35.0%
AATTCCGAAATTCCAGTCAT+CGG - chr1_1:27840464-27840483 None:intergenic 35.0%
!!! CAAATCACATTTTGGCTGTT+CGG - chr1_1:27840592-27840611 None:intergenic 35.0%
!! TCTGTTTCTATGTTCGGTAA+CGG - chr1_1:27840629-27840648 None:intergenic 35.0%
! TGTCGATAGGCATTTTATTG+GGG - chr1_1:27840777-27840796 None:intergenic 35.0%
TGGATAAATAAGGGATCTGA+AGG - chr1_1:27840804-27840823 None:intergenic 35.0%
GTTACTAGAGAACAAGTTAC+TGG - chr1_1:27840824-27840843 None:intergenic 35.0%
ACAATATCATCCAGAGTAAG+CGG - chr1_1:27841450-27841469 None:intergenic 35.0%
TTGAGTGTGCAGTTTATAAG+TGG + chr1_1:27841526-27841545 Msa0016710:intron 35.0%
TTGTTCCAGGAATTTAATGG+TGG + chr1_1:27841796-27841815 Msa0016710:intron 35.0%
AGAAACCACCATTAAATTCC+TGG - chr1_1:27841804-27841823 None:intergenic 35.0%
TTTCCTGACAAATACTTGGA+AGG + chr1_1:27841834-27841853 Msa0016710:intron 35.0%
ATTCCTTCCAAGTATTTGTC+AGG - chr1_1:27841840-27841859 None:intergenic 35.0%
CATCCCATTCCTATAAATGA+GGG - chr1_1:27841908-27841927 None:intergenic 35.0%
CTCATTTATAGGAATGGGAT+GGG + chr1_1:27841907-27841926 Msa0016710:intron 35.0%
TTCTACAGTTATGTCCCAAT+TGG + chr1_1:27842044-27842063 Msa0016710:intron 35.0%
!! TATTTTTGCAGCCTAAAACC+GGG + chr1_1:27842072-27842091 Msa0016710:intron 35.0%
GGTTTCTTGTAAGATTCGAT+TGG + chr1_1:27842123-27842142 Msa0016710:intron 35.0%
CGTACATTATCATGTTGTGA+TGG - chr1_1:27842234-27842253 None:intergenic 35.0%
TTTGGGGATTGTAAACTCAA+GGG - chr1_1:27842271-27842290 None:intergenic 35.0%
AAAGCTAAGAGATATAGACC+AGG - chr1_1:27842298-27842317 None:intergenic 35.0%
CATTGGGAAGCAAAAATGAT+TGG - chr1_1:27842800-27842819 None:intergenic 35.0%
GGTTGCACAAAACATAACAT+TGG - chr1_1:27842817-27842836 None:intergenic 35.0%
CAAGATTGGGAAGAAAATGA+TGG - chr1_1:27842963-27842982 None:intergenic 35.0%
AATCGATTGGGAACAAGATT+GGG - chr1_1:27842976-27842995 None:intergenic 35.0%
AAATCGATTGGGAACAAGAT+TGG - chr1_1:27842977-27842996 None:intergenic 35.0%
ATCATATCATACGCACCAAA+CGG + chr1_1:27843176-27843195 Msa0016710:intron 35.0%
CGCATAAATGAGAACCTTAA+GGG - chr1_1:27843203-27843222 None:intergenic 35.0%
TCGCATAAATGAGAACCTTA+AGG - chr1_1:27843204-27843223 None:intergenic 35.0%
TCTTCATGTTACAATTCGTC+AGG + chr1_1:27843620-27843639 Msa0016710:intron 35.0%
CTTCATGTTACAATTCGTCA+GGG + chr1_1:27843621-27843640 Msa0016710:intron 35.0%
AGAAATTATGCCAGTAAGAG+AGG + chr1_1:27843946-27843965 Msa0016710:intron 35.0%
GAAATTATGCCAGTAAGAGA+GGG + chr1_1:27843947-27843966 Msa0016710:intron 35.0%
AAATTATGCCAGTAAGAGAG+GGG + chr1_1:27843948-27843967 Msa0016710:intron 35.0%
TTGAAATCATTATCAGGCAC+AGG - chr1_1:27844141-27844160 None:intergenic 35.0%
CAAGAATTAACAGCACATAG+GGG - chr1_1:27844495-27844514 None:intergenic 35.0%
GCAAGAATTAACAGCACATA+GGG - chr1_1:27844496-27844515 None:intergenic 35.0%
GGATGTAATTTCTTCGCATT+AGG - chr1_1:27844578-27844597 None:intergenic 35.0%
AATGCGAAGAAATTACATCC+TGG + chr1_1:27844578-27844597 Msa0016710:CDS 35.0%
AAGTGTATCAAGTTTCGCAA+TGG + chr1_1:27844702-27844721 Msa0016710:intron 35.0%
CTTGTTTGTGACATGTTCTA+TGG + chr1_1:27844807-27844826 Msa0016710:intron 35.0%
!!! TGCTAGTTTTGTTTAAGGGA+TGG - chr1_1:27844899-27844918 None:intergenic 35.0%
AAACTAATGTGCAATGACTG+AGG + chr1_1:27845099-27845118 Msa0016710:intron 35.0%
TGCGATTATGTCCTGTAAAA+CGG - chr1_1:27845136-27845155 None:intergenic 35.0%
CAAGTATTAGCTACACTTAG+CGG + chr1_1:27845204-27845223 Msa0016710:CDS 35.0%
!!! AAGGTCGGTCTTATTTTAGT+TGG + chr1_1:27845237-27845256 Msa0016710:intron 35.0%
!! TTACCTACCAAAAGCATTAC+AGG - chr1_1:27845303-27845322 None:intergenic 35.0%
ACAAGGAATGTAGCAATACA+TGG - chr1_1:27845510-27845529 None:intergenic 35.0%
AAAACACAATTGGTTGTGTC+TGG - chr1_1:27845538-27845557 None:intergenic 35.0%
TGCATCATGCAAAACACAAT+TGG - chr1_1:27845548-27845567 None:intergenic 35.0%
CAACAGACACATCTATTATG+GGG - chr1_1:27845667-27845686 None:intergenic 35.0%
TGTTGAATGTCATTCTCACT+TGG + chr1_1:27845682-27845701 Msa0016710:intron 35.0%
!! TGTAGTTTTGCATTCCCTAA+TGG + chr1_1:27845743-27845762 Msa0016710:intron 35.0%
TAACTGCAAACAGATCTTGA+AGG + chr1_1:27845836-27845855 Msa0016710:CDS 35.0%
TCGTAGAGAGATGATAGTTA+TGG + chr1_1:27845994-27846013 Msa0016710:intron 35.0%
TAATGAGTATCCTTGGATTG+TGG + chr1_1:27846475-27846494 Msa0016710:intron 35.0%
!!! ACATTTTTGGTTGTGGATTG+GGG + chr1_1:27846621-27846640 Msa0016710:intron 35.0%
!!! AGTGCATGTTTGTTTTGCAT+TGG - chr1_1:27846690-27846709 None:intergenic 35.0%
ACTTCTTATCTGGTACAGAA+TGG - chr1_1:27846869-27846888 None:intergenic 35.0%
AGGATTGAGAACTTCTTATC+TGG - chr1_1:27846879-27846898 None:intergenic 35.0%
! ATCTATCCAATCTAGGACTT+GGG - chr1_1:27847052-27847071 None:intergenic 35.0%
! TTGCTATTCTTGACTATCTG+AGG + chr1_1:27847366-27847385 Msa0016710:intron 35.0%
TGCTATTCTTGACTATCTGA+GGG + chr1_1:27847367-27847386 Msa0016710:intron 35.0%
TATGAGAGAAACATAACTGG+CGG - chr1_1:27847432-27847451 None:intergenic 35.0%
GTGTATGAGAGAAACATAAC+TGG - chr1_1:27847435-27847454 None:intergenic 35.0%
! ATTTGCCTTTCCAACTTTTC+AGG + chr1_1:27847482-27847501 Msa0016710:intron 35.0%
! CAAAGTAATTATTGGTGGCA+TGG - chr1_1:27847524-27847543 None:intergenic 35.0%
!!! CTTGTGGAATAGTTTTGTAG+AGG + chr1_1:27847659-27847678 Msa0016710:intron 35.0%
!! AGAGGTGTCTAAAAGAATAC+GGG + chr1_1:27847677-27847696 Msa0016710:intron 35.0%
AGTTCCAAGAATAAGACCAT+CGG - chr1_1:27847892-27847911 None:intergenic 35.0%
CAGATTCTCTTGTTAAGATC+TGG + chr1_1:27847919-27847938 Msa0016710:CDS 35.0%
GCAAATGTTGCTAAGTTTGA+TGG + chr1_1:27848057-27848076 Msa0016710:CDS 35.0%
!! GCAATATCCTTTTCTGAGAA+TGG + chr1_1:27848099-27848118 Msa0016710:CDS 35.0%
GTAGTATCCATTCTCAGAAA+AGG - chr1_1:27848109-27848128 None:intergenic 35.0%
! TCATGATGGTGTAAAGCTTT+GGG + chr1_1:27848255-27848274 Msa0016710:CDS 35.0%
! TACGCAAGTTGAAAAACTTC+CGG + chr1_1:27848281-27848300 Msa0016710:CDS 35.0%
TGACTCTCTCTTATTGTCAA+TGG + chr1_1:27848348-27848367 Msa0016710:intron 35.0%
GTCTAGTGTAGAAGAGTTAT+TGG + chr1_1:27848506-27848525 Msa0016710:intron 35.0%
!!! GTTGTTTTTGCATAGCTTAG+GGG + chr1_1:27848646-27848665 Msa0016710:intron 35.0%
TACCCAAATACCCTTTAGAT+TGG + chr1_1:27848777-27848796 Msa0016710:intron 35.0%
TCAAGGAAAGACTAATGGAA+TGG - chr1_1:27848855-27848874 None:intergenic 35.0%
ATACTTAGCAGTTGCATCAA+TGG + chr1_1:27849128-27849147 Msa0016710:CDS 35.0%
! TTAGACCAAGCTTTAATAGC+AGG - chr1_1:27849251-27849270 None:intergenic 35.0%
! TAGTTTTCCTTCACATACCA+TGG + chr1_1:27849321-27849340 Msa0016710:three_prime_UTR 35.0%
CACGTTAAAAATTATCCGAG+AGG - chr1_1:27849443-27849462 None:intergenic 35.0%
ACAAAAATTCCTGGTAGCAA+TGG - chr1_1:27849498-27849517 None:intergenic 35.0%
! GTAGTGTACTGGTGATAATA+TGG + chr1_1:27849559-27849578 Msa0016710:three_prime_UTR 35.0%
! TGTACTGGTGATAATATGGA+AGG + chr1_1:27849563-27849582 Msa0016710:three_prime_UTR 35.0%
TCGAGAAGAGATTAATCGAG+AGG + chr1_1:27839185-27839204 Msa0016710:CDS 40.0%
TGTTAGGGTTGAGGGTAATT+TGG + chr1_1:27839375-27839394 Msa0016710:intron 40.0%
GTTAGGGTTGAGGGTAATTT+GGG + chr1_1:27839376-27839395 Msa0016710:intron 40.0%
TGAGGGTAATTTGGGAATAG+TGG + chr1_1:27839384-27839403 Msa0016710:intron 40.0%
! GGTGAGTGTCTTTTGGTATT+AGG + chr1_1:27839452-27839471 Msa0016710:intron 40.0%
! TTTTGGTATTAGGGCCCATT+TGG + chr1_1:27839462-27839481 Msa0016710:intron 40.0%
AACTAAACTATGGGCCTGTT+TGG - chr1_1:27839673-27839692 None:intergenic 40.0%
GTTCTTCAAGGGTAAAGTAG+TGG + chr1_1:27839724-27839743 Msa0016710:intron 40.0%
! AGGGTAAAGTAGTGGAAATC+AGG + chr1_1:27839732-27839751 Msa0016710:intron 40.0%
GCTCGGTAATTTGGGAATAA+TGG + chr1_1:27839793-27839812 Msa0016710:intron 40.0%
CATGAGTCGATGTCATTACA+CGG - chr1_1:27839959-27839978 None:intergenic 40.0%
TTGCCGACAACTATGAAACA+TGG - chr1_1:27840040-27840059 None:intergenic 40.0%
TTAGTTGTACAACCCATGAC+TGG + chr1_1:27840080-27840099 Msa0016710:intron 40.0%
! ACAACCCATGACTGGAATTT+TGG + chr1_1:27840088-27840107 Msa0016710:intron 40.0%
! AATATTTAAGGCGCGACATG+TGG + chr1_1:27840135-27840154 Msa0016710:intron 40.0%
!!! CTGGATACCGACTTTTGTAT+TGG + chr1_1:27840168-27840187 Msa0016710:intron 40.0%
!!! GTTGTATCGGTGCTATCTTT+TGG + chr1_1:27840283-27840302 Msa0016710:intron 40.0%
! CGTAGCATGTTTGAAGTTTG+AGG + chr1_1:27840347-27840366 Msa0016710:intron 40.0%
! AGCATGTTTGAAGTTTGAGG+TGG + chr1_1:27840350-27840369 Msa0016710:intron 40.0%
ACAACCGATGACTGGAATTT+CGG + chr1_1:27840457-27840476 Msa0016710:intron 40.0%
GATTACACAATAGGTTCCCA+AGG + chr1_1:27840683-27840702 Msa0016710:intron 40.0%
!! TTGGGGTCTTGTTATTGGTT+GGG - chr1_1:27840760-27840779 None:intergenic 40.0%
!! ATTGGGGTCTTGTTATTGGT+TGG - chr1_1:27840761-27840780 None:intergenic 40.0%
ATCTGAAGGACAATGTCGAT+AGG - chr1_1:27840790-27840809 None:intergenic 40.0%
TTTATTCACAGCGAATCGTG+TGG + chr1_1:27841219-27841238 Msa0016710:intron 40.0%
! GATATTGTGCCGATCAAAAC+AGG + chr1_1:27841462-27841481 Msa0016710:CDS 40.0%
!!! CATACCTTGCCTGTTTTGAT+CGG - chr1_1:27841474-27841493 None:intergenic 40.0%
TCAAAACAGGCAAGGTATGT+TGG + chr1_1:27841475-27841494 Msa0016710:intron 40.0%
CCATCCCATTCCTATAAATG+AGG - chr1_1:27841909-27841928 None:intergenic 40.0%
CCTCATTTATAGGAATGGGA+TGG + chr1_1:27841906-27841925 Msa0016710:intron 40.0%
GTTAAGTCATGCTCTATACC+AGG + chr1_1:27841983-27842002 Msa0016710:CDS 40.0%
TCATGCTCTATACCAGGTAA+GGG + chr1_1:27841989-27842008 Msa0016710:intron 40.0%
TACAGTTATGTCCCAATTGG+TGG + chr1_1:27842047-27842066 Msa0016710:intron 40.0%
GTTTGGGGATTGTAAACTCA+AGG - chr1_1:27842272-27842291 None:intergenic 40.0%
ATATAGACCAGGAAGGTTTG+GGG - chr1_1:27842287-27842306 None:intergenic 40.0%
GATATAGACCAGGAAGGTTT+GGG - chr1_1:27842288-27842307 None:intergenic 40.0%
AGATATAGACCAGGAAGGTT+TGG - chr1_1:27842289-27842308 None:intergenic 40.0%
CTAAGAGATATAGACCAGGA+AGG - chr1_1:27842294-27842313 None:intergenic 40.0%
TGCTAACCCACCAAAAACTA+AGG - chr1_1:27842468-27842487 None:intergenic 40.0%
AGAGGTTTACTGAGGAATAG+AGG - chr1_1:27842522-27842541 None:intergenic 40.0%
TTTGGCTGTTGCACATGAAT+TGG + chr1_1:27842677-27842696 Msa0016710:intron 40.0%
!! GTTTTGTGCAACCGATTTTC+TGG + chr1_1:27842824-27842843 Msa0016710:intron 40.0%
ATCCCAGTATGCGATTTGTA+GGG - chr1_1:27843580-27843599 None:intergenic 40.0%
AATCCCAGTATGCGATTTGT+AGG - chr1_1:27843581-27843600 None:intergenic 40.0%
GGGATTTGTGTTCATGTTCA+CGG + chr1_1:27843595-27843614 Msa0016710:intron 40.0%
! GCCTTCTAAGAGTAATCGAA+GGG + chr1_1:27843675-27843694 Msa0016710:intron 40.0%
TCCCTTCGATTACTCTTAGA+AGG - chr1_1:27843679-27843698 None:intergenic 40.0%
TAAGAGTAATCGAAGGGAGA+AGG + chr1_1:27843681-27843700 Msa0016710:intron 40.0%
AAGAGTAATCGAAGGGAGAA+GGG + chr1_1:27843682-27843701 Msa0016710:intron 40.0%
GAGTCTGTTCTCACTGAAAA+AGG + chr1_1:27843717-27843736 Msa0016710:intron 40.0%
CAACTAAGTACAGGTGAAGT+TGG + chr1_1:27843824-27843843 Msa0016710:intron 40.0%
!!! TGGCGAGAAGTTTTTTTGGA+CGG + chr1_1:27843859-27843878 Msa0016710:intron 40.0%
! ACGGGAAAGATTGATGACAA+AGG + chr1_1:27843878-27843897 Msa0016710:intron 40.0%
AATTATGCCAGTAAGAGAGG+GGG + chr1_1:27843949-27843968 Msa0016710:intron 40.0%
TTTCTCCAACTGTTCTTTCC+TGG + chr1_1:27844091-27844110 Msa0016710:intron 40.0%
TCATACCAGGAAAGAACAGT+TGG - chr1_1:27844099-27844118 None:intergenic 40.0%
! TTTTAAGCCTTGCAATCACG+CGG - chr1_1:27844247-27844266 None:intergenic 40.0%
CGTGATTGCAAGGCTTAAAA+AGG + chr1_1:27844247-27844266 Msa0016710:CDS 40.0%
GCATTAGCTGTCACAGAATT+TGG - chr1_1:27844332-27844351 None:intergenic 40.0%
AATGCTCCTGTTCATAGCAA+TGG + chr1_1:27844347-27844366 Msa0016710:CDS 40.0%
ATGCTCCTGTTCATAGCAAT+GGG + chr1_1:27844348-27844367 Msa0016710:CDS 40.0%
! CTTTTCCCATTGCTATGAAC+AGG - chr1_1:27844356-27844375 None:intergenic 40.0%
GTTCATAGCAATGGGAAAAG+AGG + chr1_1:27844356-27844375 Msa0016710:CDS 40.0%
CGCAAGAATTAACAGCACAT+AGG - chr1_1:27844497-27844516 None:intergenic 40.0%
CACACACACACACACATTAA+TGG + chr1_1:27844771-27844790 Msa0016710:intron 40.0%
ATTTCAGATTCCTGCGACTT+TGG + chr1_1:27844833-27844852 Msa0016710:intron 40.0%
TTACAGGACATAATCGCAAC+TGG + chr1_1:27845138-27845157 Msa0016710:intron 40.0%
!!! GTTATTTTTGACCGTCCATC+AGG + chr1_1:27845180-27845199 Msa0016710:CDS 40.0%
CTAATACTTGTCCTGATGGA+CGG - chr1_1:27845194-27845213 None:intergenic 40.0%
GTAGCTAATACTTGTCCTGA+TGG - chr1_1:27845198-27845217 None:intergenic 40.0%
! ACTTAGCGGTCACTCTAAAA+AGG + chr1_1:27845218-27845237 Msa0016710:CDS 40.0%
! TAGCTGACCTGTAATGCTTT+TGG + chr1_1:27845293-27845312 Msa0016710:intron 40.0%
! TGACCTGTAATGCTTTTGGT+AGG + chr1_1:27845297-27845316 Msa0016710:intron 40.0%
GTAACAAGCGTGAAGTTTGT+AGG + chr1_1:27845319-27845338 Msa0016710:CDS 40.0%
CAGGGTGAATCTATCATAAC+TGG + chr1_1:27845343-27845362 Msa0016710:CDS 40.0%
! CATAACTGGTTCAGCAGATA+AGG + chr1_1:27845357-27845376 Msa0016710:CDS 40.0%
TATTGCAGACAGTTCGTTTG+TGG + chr1_1:27845790-27845809 Msa0016710:intron 40.0%
!! TCCTACTTGTTGTACTAGGT+GGG - chr1_1:27846046-27846065 None:intergenic 40.0%
!! ATCCTACTTGTTGTACTAGG+TGG - chr1_1:27846047-27846066 None:intergenic 40.0%
!! TTTTTGAGGACTTCACCTCT+TGG - chr1_1:27846182-27846201 None:intergenic 40.0%
AAGAGGTGAAGTCCTCAAAA+AGG + chr1_1:27846181-27846200 Msa0016710:intron 40.0%
! CTTTTCATTTTCACTTCCCC+TGG + chr1_1:27846207-27846226 Msa0016710:intron 40.0%
TTAAGGAGGAATGAGGAAGT+GGG - chr1_1:27846252-27846271 None:intergenic 40.0%
TAAGGAGTTAAGGAGGAATG+AGG - chr1_1:27846259-27846278 None:intergenic 40.0%
ATGTGATCGAACTCAATGTG+CGG - chr1_1:27846416-27846435 None:intergenic 40.0%
AACAGTCGTAGATTATGTCG+TGG + chr1_1:27846437-27846456 Msa0016710:intron 40.0%
ACAGTCGTAGATTATGTCGT+GGG + chr1_1:27846438-27846457 Msa0016710:intron 40.0%
! ATAGCTTTTGCCACAATCCA+AGG - chr1_1:27846488-27846507 None:intergenic 40.0%
GTAAGTGGTCTAATTGGCAT+AGG - chr1_1:27846520-27846539 None:intergenic 40.0%
GTCAAGGTCAATATGGTAAG+TGG - chr1_1:27846535-27846554 None:intergenic 40.0%
CCAACATGTCAAGGTCAATA+TGG - chr1_1:27846542-27846561 None:intergenic 40.0%
CCATATTGACCTTGACATGT+TGG + chr1_1:27846539-27846558 Msa0016710:intron 40.0%
ACTATTTGACCAGGGTAAAG+AGG - chr1_1:27846811-27846830 None:intergenic 40.0%
TGTACGCAACTATTTGACCA+GGG - chr1_1:27846819-27846838 None:intergenic 40.0%
CCTAGCAGTCAAGAGTTTAT+GGG - chr1_1:27847002-27847021 None:intergenic 40.0%
ACCTAGCAGTCAAGAGTTTA+TGG - chr1_1:27847003-27847022 None:intergenic 40.0%
! AACTCTTGACTGCTAGGTTT+TGG + chr1_1:27847005-27847024 Msa0016710:intron 40.0%
GAAAAACCCAAGTCCTAGAT+TGG + chr1_1:27847043-27847062 Msa0016710:intron 40.0%
! GATCTATCCAATCTAGGACT+TGG - chr1_1:27847053-27847072 None:intergenic 40.0%
TCAGGAGATCTATCCAATCT+AGG - chr1_1:27847059-27847078 None:intergenic 40.0%
CTAACTCATCCTTGCAAAAC+CGG - chr1_1:27847120-27847139 None:intergenic 40.0%
GGATGTACGACTTACTAAAG+AGG - chr1_1:27847196-27847215 None:intergenic 40.0%
AACATAACTGGCGGGAAATA+AGG - chr1_1:27847423-27847442 None:intergenic 40.0%
ATGAGAGAAACATAACTGGC+GGG - chr1_1:27847431-27847450 None:intergenic 40.0%
TTCCACCTGAAAAGTTGGAA+AGG - chr1_1:27847490-27847509 None:intergenic 40.0%
TTTGTGACTGCATCACTTGA+TGG + chr1_1:27847540-27847559 Msa0016710:CDS 40.0%
! GAGGTGTCTAAAAGAATACG+GGG + chr1_1:27847678-27847697 Msa0016710:intron 40.0%
TCATTGTCAACTCAGCACTT+AGG - chr1_1:27847812-27847831 None:intergenic 40.0%
! GTGCTGAGTTGACAATGATT+TGG + chr1_1:27847814-27847833 Msa0016710:intron 40.0%
GTTCCAAGAATAAGACCATC+GGG - chr1_1:27847891-27847910 None:intergenic 40.0%
!! GATGGTCTTATTCTTGGAAC+TGG + chr1_1:27847891-27847910 Msa0016710:CDS 40.0%
! GATCTGGGATGTAAAAAGTC+AGG + chr1_1:27847935-27847954 Msa0016710:CDS 40.0%
! GCTAAGTTTGATGGACATGT+CGG + chr1_1:27848066-27848085 Msa0016710:CDS 40.0%
! CTAAGTTTGATGGACATGTC+GGG + chr1_1:27848067-27848086 Msa0016710:CDS 40.0%
TGAGAATGGATACTACCTTG+CGG + chr1_1:27848113-27848132 Msa0016710:CDS 40.0%
!!! CATTTTTTTCACGTACCGCA+AGG - chr1_1:27848131-27848150 None:intergenic 40.0%
! CTCATGATGGTGTAAAGCTT+TGG + chr1_1:27848254-27848273 Msa0016710:CDS 40.0%
! ACGCAAGTTGAAAAACTTCC+GGG + chr1_1:27848282-27848301 Msa0016710:CDS 40.0%
TTGAAAAACTTCCGGGACTA+TGG + chr1_1:27848289-27848308 Msa0016710:CDS 40.0%
TTGGAGTTGCTGAGTCATAT+GGG - chr1_1:27848315-27848334 None:intergenic 40.0%
GAGTCAATACCAGAGTTTGT+TGG - chr1_1:27848334-27848353 None:intergenic 40.0%
! CTTCCTGATTTATCTGGAAC+AGG + chr1_1:27848955-27848974 Msa0016710:CDS 40.0%
GTACCTGTTCCAGATAAATC+AGG - chr1_1:27848961-27848980 None:intergenic 40.0%
AGGAGCGAGAAAAATCAAGA+CGG - chr1_1:27848983-27849002 None:intergenic 40.0%
ATACTAGATGTGTATGGTGC+AGG - chr1_1:27849022-27849041 None:intergenic 40.0%
GACCGGAATCTTCGAATATT+TGG + chr1_1:27849150-27849169 Msa0016710:CDS 40.0%
GGCCAAATATTCGAAGATTC+CGG - chr1_1:27849155-27849174 None:intergenic 40.0%
TTGTCAGAAATATCTTCGCC+AGG - chr1_1:27849180-27849199 None:intergenic 40.0%
ACATACACCATGGTATGTGA+AGG - chr1_1:27849331-27849350 None:intergenic 40.0%
TTCACATACCATGGTGTATG+TGG + chr1_1:27849330-27849349 Msa0016710:three_prime_UTR 40.0%
!!! TGGGTTTTGGAGAAGAGAGA+GGG - chr1_1:27838961-27838980 None:intergenic 45.0%
!!! TTGGGTTTTGGAGAAGAGAG+AGG - chr1_1:27838962-27838981 None:intergenic 45.0%
TTAACTGGAGCAGTTCATCG+TGG - chr1_1:27839008-27839027 None:intergenic 45.0%
!!! GTTTTTTGCAGTTTCCGGTG+AGG + chr1_1:27839120-27839139 Msa0016710:intron 45.0%
! CTGTGGTGTCAAAAAGCTCT+GGG + chr1_1:27839155-27839174 Msa0016710:CDS 45.0%
GATTAGCGTGTTAGGGTTGA+GGG + chr1_1:27839367-27839386 Msa0016710:intron 45.0%
GTATTAGGGCCCATTTGGAT+TGG + chr1_1:27839467-27839486 Msa0016710:intron 45.0%
AACTATGGGCCTGTTTGGAT+TGG - chr1_1:27839668-27839687 None:intergenic 45.0%
! GTAGTGGAAATCAGGAGTGT+AGG + chr1_1:27839740-27839759 Msa0016710:intron 45.0%
TGTTGGGTAGCTCGGTAATT+TGG + chr1_1:27839784-27839803 Msa0016710:intron 45.0%
GTTGGGTAGCTCGGTAATTT+GGG + chr1_1:27839785-27839804 Msa0016710:intron 45.0%
! ACGGCTTCGATCAAAAGTGT+CGG - chr1_1:27839940-27839959 None:intergenic 45.0%
TGTATTGTCGTCGTTGTGTC+TGG + chr1_1:27840011-27840030 Msa0016710:intron 45.0%
! GACATGTGGTTCTTTGGTTC+TGG + chr1_1:27840149-27840168 Msa0016710:intron 45.0%
TCAGTTACACAACCGATGAC+TGG + chr1_1:27840449-27840468 Msa0016710:intron 45.0%
CCAAGACTCGCAAATTCCTT+GGG - chr1_1:27840702-27840721 None:intergenic 45.0%
CCAAGGAATTTGCGAGTCTT+GGG + chr1_1:27840700-27840719 Msa0016710:intron 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - chr1_1:27840731-27840750 None:intergenic 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr1_1:27840735-27840754 None:intergenic 45.0%
!! TTTGGGAAGTGTCCAGTTAC+AGG + chr1_1:27841420-27841439 Msa0016710:CDS 45.0%
! CAGGCAAGGTATGTTGGTAA+TGG + chr1_1:27841481-27841500 Msa0016710:intron 45.0%
AGAACCACGGCTAACATGAA+CGG - chr1_1:27841558-27841577 None:intergenic 45.0%
GTCATGCTCTATACCAGGTA+AGG + chr1_1:27841988-27842007 Msa0016710:intron 45.0%
TTACAATCCCCAAACCTTCC+TGG + chr1_1:27842277-27842296 Msa0016710:intron 45.0%
!! CTTAGCTTTTACGGCCTGTT+TGG + chr1_1:27842309-27842328 Msa0016710:intron 45.0%
TCCTGCTTAAATCCGTTGCT+TGG + chr1_1:27842372-27842391 Msa0016710:intron 45.0%
CCTGCTTAAATCCGTTGCTT+GGG + chr1_1:27842373-27842392 Msa0016710:intron 45.0%
GAGTCGAAAGAGGTTTACTG+AGG - chr1_1:27842530-27842549 None:intergenic 45.0%
TAGAAGCAGAGAGTCGAAAG+AGG - chr1_1:27842540-27842559 None:intergenic 45.0%
CTATCATGTGTTTGGCGCAA+AGG - chr1_1:27843037-27843056 None:intergenic 45.0%
GTGTGCACCAAACACATGAT+AGG + chr1_1:27843088-27843107 Msa0016710:intron 45.0%
GTAGGGAGAGTGACTGAATT+TGG - chr1_1:27843563-27843582 None:intergenic 45.0%
TCTCCCTACAAATCGCATAC+TGG + chr1_1:27843574-27843593 Msa0016710:intron 45.0%
CTCCCTACAAATCGCATACT+GGG + chr1_1:27843575-27843594 Msa0016710:intron 45.0%
ATTCGTCAGGGAAGATGTGT+TGG + chr1_1:27843633-27843652 Msa0016710:intron 45.0%
TTCGTCAGGGAAGATGTGTT+GGG + chr1_1:27843634-27843653 Msa0016710:intron 45.0%
GGAAGATGTGTTGGGAGTTT+GGG + chr1_1:27843642-27843661 Msa0016710:intron 45.0%
GAAGATGTGTTGGGAGTTTG+GGG + chr1_1:27843643-27843662 Msa0016710:intron 45.0%
CGATTACTCTTAGAAGGCCA+AGG - chr1_1:27843673-27843692 None:intergenic 45.0%
! GGCCTTCTAAGAGTAATCGA+AGG + chr1_1:27843674-27843693 Msa0016710:intron 45.0%
AGGGAGAAGGGAAAATGAGA+AGG + chr1_1:27843694-27843713 Msa0016710:intron 45.0%
GGGAGAAGGGAAAATGAGAA+GGG + chr1_1:27843695-27843714 Msa0016710:intron 45.0%
!!! GGCGAGAAGTTTTTTTGGAC+GGG + chr1_1:27843860-27843879 Msa0016710:intron 45.0%
AAAAGGAACGAGACGAAGCT+AGG + chr1_1:27844264-27844283 Msa0016710:CDS 45.0%
AGCTAGGTCTATACTTGCAC+AGG + chr1_1:27844280-27844299 Msa0016710:CDS 45.0%
CTATACTTGCACAGGCAGAA+AGG + chr1_1:27844288-27844307 Msa0016710:CDS 45.0%
GCACATAGGGGAAGCTATTA+AGG - chr1_1:27844483-27844502 None:intergenic 45.0%
!!! TGTTTTAGCTGCTGATGACG+AGG + chr1_1:27844544-27844563 Msa0016710:intron 45.0%
! AGCGGTCACTCTAAAAAGGT+CGG + chr1_1:27845222-27845241 Msa0016710:intron 45.0%
AAGCGTGAAGTTTGTAGGTC+AGG + chr1_1:27845324-27845343 Msa0016710:CDS 45.0%
AGCGTGAAGTTTGTAGGTCA+GGG + chr1_1:27845325-27845344 Msa0016710:CDS 45.0%
TGGTTTCACAGCTCAGAAGT+TGG + chr1_1:27845416-27845435 Msa0016710:intron 45.0%
!! GTCTGCTCTAAGACGAAAGA+GGG - chr1_1:27845460-27845479 None:intergenic 45.0%
!! TGTCTGCTCTAAGACGAAAG+AGG - chr1_1:27845461-27845480 None:intergenic 45.0%
GGTTGTGTCTGGAGAAAACA+AGG - chr1_1:27845527-27845546 None:intergenic 45.0%
AGACAGTTCGTTTGTGGCAA+GGG + chr1_1:27845796-27845815 Msa0016710:intron 45.0%
TAGGTGGGGTTAACTACATG+TGG - chr1_1:27846031-27846050 None:intergenic 45.0%
!! CCTACTTGTTGTACTAGGTG+GGG - chr1_1:27846045-27846064 None:intergenic 45.0%
CTTCACCTCTTGGATTCTTG+AGG - chr1_1:27846172-27846191 None:intergenic 45.0%
TTAACGGTTCAGAGAACCAG+GGG - chr1_1:27846226-27846245 None:intergenic 45.0%
GTTAACGGTTCAGAGAACCA+GGG - chr1_1:27846227-27846246 None:intergenic 45.0%
ATGAGGAAGTGGGAGGTTAA+CGG - chr1_1:27846242-27846261 None:intergenic 45.0%
GTTAAGGAGGAATGAGGAAG+TGG - chr1_1:27846253-27846272 None:intergenic 45.0%
AACTGTGGAGCAACAGAGTA+GGG - chr1_1:27846309-27846328 None:intergenic 45.0%
TAACTGTGGAGCAACAGAGT+AGG - chr1_1:27846310-27846329 None:intergenic 45.0%
GGAGATATCTCTGACTAAGG+TGG - chr1_1:27846395-27846414 None:intergenic 45.0%
TGCGGAGATATCTCTGACTA+AGG - chr1_1:27846398-27846417 None:intergenic 45.0%
TTATGTCGTGGGATGTCAGT+CGG + chr1_1:27846449-27846468 Msa0016710:intron 45.0%
TCGGGACTAATGAGTATCCT+TGG + chr1_1:27846468-27846487 Msa0016710:intron 45.0%
GCTTTCAACAAGGACTTCAC+AGG - chr1_1:27846565-27846584 None:intergenic 45.0%
!! GAGAATGCTGGCTTTCAACA+AGG - chr1_1:27846575-27846594 None:intergenic 45.0%
AGAGCTGTTTGTGAGAATGC+TGG - chr1_1:27846587-27846606 None:intergenic 45.0%
TAGCAACATCCTCTTTACCC+TGG + chr1_1:27846799-27846818 Msa0016710:intron 45.0%
GTGTACGCAACTATTTGACC+AGG - chr1_1:27846820-27846839 None:intergenic 45.0%
TGGCATGCATTTGATGTGAG+CGG - chr1_1:27846849-27846868 None:intergenic 45.0%
CCCATAAACTCTTGACTGCT+AGG + chr1_1:27846999-27847018 Msa0016710:intron 45.0%
! CGGTTTTGCAAGGATGAGTT+AGG + chr1_1:27847118-27847137 Msa0016710:intron 45.0%
!! TTGTAGTGAAGGTACTCGAC+TGG - chr1_1:27847217-27847236 None:intergenic 45.0%
!! TGCCTTTCCAACTTTTCAGG+TGG + chr1_1:27847485-27847504 Msa0016710:intron 45.0%
ACAGCTTCCACCTGAAAAGT+TGG - chr1_1:27847495-27847514 None:intergenic 45.0%
TTCAGGAACTTGTCTGACTC+AGG + chr1_1:27847587-27847606 Msa0016710:CDS 45.0%
GGTAGGAAGGAATGCAGTAA+AGG - chr1_1:27847791-27847810 None:intergenic 45.0%
AACTCAGCACTTAGGTAGGA+AGG - chr1_1:27847804-27847823 None:intergenic 45.0%
TGTCAACTCAGCACTTAGGT+AGG - chr1_1:27847808-27847827 None:intergenic 45.0%
TAGGTTTCTGACTCTTCCGA+AGG + chr1_1:27847843-27847862 Msa0016710:intron 45.0%
AGCTGCAGATGTATAGCCTT+CGG - chr1_1:27847862-27847881 None:intergenic 45.0%
!! CATCCCGATGGTCTTATTCT+TGG + chr1_1:27847885-27847904 Msa0016710:CDS 45.0%
CTTTACACCATCATGAGCTG+CGG - chr1_1:27848251-27848270 None:intergenic 45.0%
GTTGGAGTTGCTGAGTCATA+TGG - chr1_1:27848316-27848335 None:intergenic 45.0%
TCAGCAACTCCAACAAACTC+TGG + chr1_1:27848322-27848341 Msa0016710:CDS 45.0%
! TGGGCCGAATTTTACACATG+TGG - chr1_1:27849100-27849119 None:intergenic 45.0%
TAGCAGTTGCATCAATGGAC+CGG + chr1_1:27849133-27849152 Msa0016710:CDS 45.0%
CTTCGAATATTTGGCCAACC+TGG + chr1_1:27849159-27849178 Msa0016710:CDS 45.0%
CAGAAATATCTTCGCCAGGT+TGG - chr1_1:27849176-27849195 None:intergenic 45.0%
TGCTGCCTGCTATTAAAGCT+TGG + chr1_1:27849243-27849262 Msa0016710:three_prime_UTR 45.0%
ATACCATGGTGTATGTGGAG+TGG + chr1_1:27849335-27849354 Msa0016710:three_prime_UTR 45.0%
TGAAGTCTGTATTGCCCTCT+CGG + chr1_1:27849425-27849444 Msa0016710:three_prime_UTR 45.0%
AATTGTTGGCCATTGCTACC+AGG + chr1_1:27849486-27849505 Msa0016710:three_prime_UTR 45.0%
!! TAAATGATAAATTTAATATT+TGG + chr1_1:27844022-27844041 Msa0016710:intron 5.0%
TTTGACACCACAGGCTCATC+TGG - chr1_1:27839148-27839167 None:intergenic 50.0%
! CCAGAGCTTTTTGACACCAC+AGG - chr1_1:27839157-27839176 None:intergenic 50.0%
! CCTGTGGTGTCAAAAAGCTC+TGG + chr1_1:27839154-27839173 Msa0016710:CDS 50.0%
! GGATTAGCGTGTTAGGGTTG+AGG + chr1_1:27839366-27839385 Msa0016710:intron 50.0%
!! AGATGGAGTGTTGGGTAGCT+CGG + chr1_1:27839776-27839795 Msa0016710:intron 50.0%
!! CGGCTTCGATCAAAAGTGTC+GGG - chr1_1:27839939-27839958 None:intergenic 50.0%
GCGCGACATGTGAAAGCTAA+AGG + chr1_1:27840213-27840232 Msa0016710:intron 50.0%
CCCAAGGAATTTGCGAGTCT+TGG + chr1_1:27840699-27840718 Msa0016710:intron 50.0%
CCCAAGACTCGCAAATTCCT+TGG - chr1_1:27840703-27840722 None:intergenic 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - chr1_1:27840732-27840751 None:intergenic 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + chr1_1:27840729-27840748 Msa0016710:intron 50.0%
! TGTGCCGATCAAAACAGGCA+AGG + chr1_1:27841467-27841486 Msa0016710:CDS 50.0%
TAAGCCGTTCATGTTAGCCG+TGG + chr1_1:27841551-27841570 Msa0016710:intron 50.0%
TGGAACATTCCAAGCATGCC+AGG - chr1_1:27841674-27841693 None:intergenic 50.0%
AGCAGCAGTTGCATACAGCA+AGG + chr1_1:27841955-27841974 Msa0016710:CDS 50.0%
TCTTATCCTGCGCACCAAAC+AGG - chr1_1:27842326-27842345 None:intergenic 50.0%
TGGTGCGCAGGATAAGAAGA+CGG + chr1_1:27842329-27842348 Msa0016710:intron 50.0%
! CCCAAGCAACGGATTTAAGC+AGG - chr1_1:27842376-27842395 None:intergenic 50.0%
CTACTGATGCACCCAAGCAA+CGG - chr1_1:27842387-27842406 None:intergenic 50.0%
GAGAACCTTAAGGGTCCGTT+TGG - chr1_1:27843194-27843213 None:intergenic 50.0%
GGGAAGATGTGTTGGGAGTT+TGG + chr1_1:27843641-27843660 Msa0016710:intron 50.0%
! TTCAGGTGGTAGTGCTGTAG+TGG + chr1_1:27843976-27843995 Msa0016710:intron 50.0%
! TCAGGTGGTAGTGCTGTAGT+GGG + chr1_1:27843977-27843996 Msa0016710:intron 50.0%
GGCGGCAGATATATAGCAAG+AGG - chr1_1:27844180-27844199 None:intergenic 50.0%
GACTGCAATGCTGCTCTTTC+CGG + chr1_1:27844632-27844651 Msa0016710:CDS 50.0%
ACTGCAATGCTGCTCTTTCC+GGG + chr1_1:27844633-27844652 Msa0016710:CDS 50.0%
!!! CTCTCGCTTTTTCCTCTTCC+CGG - chr1_1:27844654-27844673 None:intergenic 50.0%
TCAACAGAAGCCAAAGTCGC+AGG - chr1_1:27844846-27844865 None:intergenic 50.0%
CAGACAGTTCGTTTGTGGCA+AGG + chr1_1:27845795-27845814 Msa0016710:intron 50.0%
TTGTGGCAAGGGTCAGATGA+TGG + chr1_1:27845807-27845826 Msa0016710:CDS 50.0%
CCCCACCTAGTACAACAAGT+AGG + chr1_1:27846042-27846061 Msa0016710:intron 50.0%
CGACACCTCAAGAATCCAAG+AGG + chr1_1:27846164-27846183 Msa0016710:intron 50.0%
GGTTAACGGTTCAGAGAACC+AGG - chr1_1:27846228-27846247 None:intergenic 50.0%
TATGTCGTGGGATGTCAGTC+GGG + chr1_1:27846450-27846469 Msa0016710:intron 50.0%
CTTCACAGGCCAACATGTCA+AGG - chr1_1:27846551-27846570 None:intergenic 50.0%
GGCATGCATTTGATGTGAGC+GGG - chr1_1:27846848-27846867 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_1:27847106-27847125 None:intergenic 50.0%
!! CCTTGCAAAACCGGCTTGTA+AGG - chr1_1:27847111-27847130 None:intergenic 50.0%
!! CCTTACAAGCCGGTTTTGCA+AGG + chr1_1:27847108-27847127 Msa0016710:intron 50.0%
! TCTGCAGCTTTTCATCCCGA+TGG + chr1_1:27847873-27847892 Msa0016710:CDS 50.0%
TGATAGACCGCAGCTCATGA+TGG + chr1_1:27848241-27848260 Msa0016710:intron 50.0%
AGTCATATGGGCCATAGTCC+CGG - chr1_1:27848303-27848322 None:intergenic 50.0%
! CAGTTGCAGGCTCTGATGTT+AGG + chr1_1:27848472-27848491 Msa0016710:CDS 50.0%
! TCCATAGTCTTGCCGATCCA+GGG + chr1_1:27849215-27849234 Msa0016710:three_prime_UTR 50.0%
! AGGCTCATCTGGAACCTCAC+CGG - chr1_1:27839137-27839156 None:intergenic 55.0%
TGAGGTTCCAGATGAGCCTG+TGG + chr1_1:27839138-27839157 Msa0016710:CDS 55.0%
AGGCGCGACATGTGGTTCTT+TGG + chr1_1:27840143-27840162 Msa0016710:intron 55.0%
GTAAGCGGCTCTCCTGTAAC+TGG - chr1_1:27841435-27841454 None:intergenic 55.0%
TACAGGAGAGCCGCTTACTC+TGG + chr1_1:27841437-27841456 Msa0016710:CDS 55.0%
AGTGAAGCCTAGACCAGTGC+AGG + chr1_1:27841637-27841656 Msa0016710:CDS 55.0%
GCAAGCATTCCTGGCATGCT+TGG + chr1_1:27841662-27841681 Msa0016710:CDS 55.0%
GGTGCGCAGGATAAGAAGAC+GGG + chr1_1:27842330-27842349 Msa0016710:intron 55.0%
CGTTGCTTGGGTGCATCAGT+AGG + chr1_1:27842385-27842404 Msa0016710:intron 55.0%
ACGCACCAAACGGACCCTTA+AGG + chr1_1:27843186-27843205 Msa0016710:intron 55.0%
ATGCCAGTAAGAGAGGGGGA+TGG + chr1_1:27843953-27843972 Msa0016710:intron 55.0%
GAACCATCCCCCTCTCTTAC+TGG - chr1_1:27843959-27843978 None:intergenic 55.0%
GTAAGAGAGGGGGATGGTTC+AGG + chr1_1:27843959-27843978 Msa0016710:intron 55.0%
! AGCTGCTGATGACGAGGAGT+TGG + chr1_1:27844550-27844569 Msa0016710:intron 55.0%
ATGCTGCTCTTTCCGGGAAG+AGG + chr1_1:27844639-27844658 Msa0016710:CDS 55.0%
CGGGAAGAGGAAAAAGCGAG+AGG + chr1_1:27844652-27844671 Msa0016710:CDS 55.0%
AGGAGGAATGAGGAAGTGGG+AGG - chr1_1:27846249-27846268 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_1:27847098-27847117 Msa0016710:intron 55.0%
! CTGCATCACTTGATGGCAGC+TGG + chr1_1:27847547-27847566 Msa0016710:CDS 55.0%
GCAGTGGAGTTTGACCACAG+TGG + chr1_1:27848438-27848457 Msa0016710:intron 55.0%
CTGCAAGGTAGGATCCACTG+TGG - chr1_1:27848455-27848474 None:intergenic 55.0%
GGATCCTACCTTGCAGTTGC+AGG + chr1_1:27848459-27848478 Msa0016710:CDS 55.0%
AGAGCCTGCAACTGCAAGGT+AGG - chr1_1:27848466-27848485 None:intergenic 55.0%
CATCAGAGCCTGCAACTGCA+AGG - chr1_1:27848470-27848489 None:intergenic 55.0%
! GCAGGCTCTGATGTTAGGTG+AGG + chr1_1:27848477-27848496 Msa0016710:intron 55.0%
! CTCCATAGTCTTGCCGATCC+AGG + chr1_1:27849214-27849233 Msa0016710:three_prime_UTR 55.0%
TCCCTGGATCGGCAAGACTA+TGG - chr1_1:27849219-27849238 None:intergenic 55.0%
GCTCCACTCCACATACACCA+TGG - chr1_1:27849341-27849360 None:intergenic 55.0%
! CTTGCTGCCTGCACTGGTCT+AGG - chr1_1:27841647-27841666 None:intergenic 60.0%
! GGAATGCTTGCTGCCTGCAC+TGG - chr1_1:27841653-27841672 None:intergenic 60.0%
GTGCAGGCAGCAAGCATTCC+TGG + chr1_1:27841653-27841672 Msa0016710:CDS 60.0%
!! TTACGGCCTGTTTGGTGCGC+AGG + chr1_1:27842317-27842336 Msa0016710:intron 60.0%
! TGGGAGTTTGGGGTGCACCT+TGG + chr1_1:27843653-27843672 Msa0016710:intron 60.0%
AGAGAGGGGGATGGTTCAGG+TGG + chr1_1:27843962-27843981 Msa0016710:intron 60.0%
CTGCTTGCCGCGTGATTGCA+AGG + chr1_1:27844237-27844256 Msa0016710:CDS 60.0%
GGCAGCAACTGTCCCTGGAT+CGG - chr1_1:27849230-27849249 None:intergenic 60.0%
TAGCAGGCAGCAACTGTCCC+TGG - chr1_1:27849235-27849254 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 27838904 27849593 27838904 ID=Msa0016710;Name=Msa0016710
chr1_1 mRNA 27838904 27849593 27838904 ID=Msa0016710-mRNA-1;Parent=Msa0016710;Name=Msa0016710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=106|1|1|1|0.94|1|18|387|522
chr1_1 exon 27838904 27839022 27838904 ID=Msa0016710-mRNA-1:exon:9309;Parent=Msa0016710-mRNA-1
chr1_1 exon 27839131 27839216 27839131 ID=Msa0016710-mRNA-1:exon:9310;Parent=Msa0016710-mRNA-1
chr1_1 exon 27841417 27841488 27841417 ID=Msa0016710-mRNA-1:exon:9311;Parent=Msa0016710-mRNA-1
chr1_1 exon 27841635 27841697 27841635 ID=Msa0016710-mRNA-1:exon:9312;Parent=Msa0016710-mRNA-1
chr1_1 exon 27841918 27842004 27841918 ID=Msa0016710-mRNA-1:exon:9313;Parent=Msa0016710-mRNA-1
chr1_1 exon 27844230 27844377 27844230 ID=Msa0016710-mRNA-1:exon:9314;Parent=Msa0016710-mRNA-1
chr1_1 exon 27844552 27844673 27844552 ID=Msa0016710-mRNA-1:exon:9315;Parent=Msa0016710-mRNA-1
chr1_1 exon 27844840 27844956 27844840 ID=Msa0016710-mRNA-1:exon:9316;Parent=Msa0016710-mRNA-1
chr1_1 exon 27845144 27845239 27845144 ID=Msa0016710-mRNA-1:exon:9317;Parent=Msa0016710-mRNA-1
chr1_1 exon 27845319 27845378 27845319 ID=Msa0016710-mRNA-1:exon:9318;Parent=Msa0016710-mRNA-1
chr1_1 exon 27845798 27845872 27845798 ID=Msa0016710-mRNA-1:exon:9319;Parent=Msa0016710-mRNA-1
chr1_1 exon 27847504 27847608 27847504 ID=Msa0016710-mRNA-1:exon:9320;Parent=Msa0016710-mRNA-1
chr1_1 exon 27847846 27847956 27847846 ID=Msa0016710-mRNA-1:exon:9321;Parent=Msa0016710-mRNA-1
chr1_1 exon 27848057 27848134 27848057 ID=Msa0016710-mRNA-1:exon:9322;Parent=Msa0016710-mRNA-1
chr1_1 exon 27848247 27848343 27848247 ID=Msa0016710-mRNA-1:exon:9323;Parent=Msa0016710-mRNA-1
chr1_1 exon 27848442 27848493 27848442 ID=Msa0016710-mRNA-1:exon:9324;Parent=Msa0016710-mRNA-1
chr1_1 exon 27848906 27848976 27848906 ID=Msa0016710-mRNA-1:exon:9325;Parent=Msa0016710-mRNA-1
chr1_1 exon 27849091 27849593 27849091 ID=Msa0016710-mRNA-1:exon:9326;Parent=Msa0016710-mRNA-1
chr1_1 five_prime_UTR 27838904 27839009 27838904 ID=Msa0016710-mRNA-1:five_prime_utr;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27839010 27839022 27839010 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27839131 27839216 27839131 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27841417 27841488 27841417 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27841635 27841697 27841635 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27841918 27842004 27841918 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27844230 27844377 27844230 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27844552 27844673 27844552 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27844840 27844956 27844840 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27845144 27845239 27845144 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27845319 27845378 27845319 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27845798 27845872 27845798 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27847504 27847608 27847504 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27847846 27847956 27847846 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27848057 27848134 27848057 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27848247 27848343 27848247 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27848442 27848493 27848442 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27848906 27848976 27848906 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 CDS 27849091 27849206 27849091 ID=Msa0016710-mRNA-1:cds;Parent=Msa0016710-mRNA-1
chr1_1 three_prime_UTR 27849207 27849593 27849207 ID=Msa0016710-mRNA-1:three_prime_utr;Parent=Msa0016710-mRNA-1
Gene Sequence

>Msa0016710

ATGAACTGCTCCATTTCCGGTGAGGTTCCAGATGAGCCTGTGGTGTCAAAAAGCTCTGGGCTTTTGTTCGAGAAGAGATTAATCGAGAGGCATATAATGGATTTTGGGAAGTGTCCAGTTACAGGAGAGCCGCTTACTCTGGATGATATTGTGCCGATCAAAACAGGCAAGATAGTGAAGCCTAGACCAGTGCAGGCAGCAAGCATTCCTGGCATGCTTGGAATGTTCCAAAATGAATGGGATGGGTTGATGCTATCTAATTTTGCATTGGAGCAGCAGTTGCATACAGCAAGGCAAGAGTTAAGTCATGCTCTATACCAGCATGATGCTGCTTGCCGCGTGATTGCAAGGCTTAAAAAGGAACGAGACGAAGCTAGGTCTATACTTGCACAGGCAGAAAGGCAGTTCCCTATTTCTACTCCAAATTCTGTGACAGCTAATGCTCCTGTTCATAGCAATGGGAAAAGAGCTGCTGATGACGAGGAGTTGGCACCTAATGCGAAGAAATTACATCCTGGAATATCTTCCAGTATAATTTCTGAGCTAACAGACTGCAATGCTGCTCTTTCCGGGAAGAGGAAAAAGCGAGAGATTCCTGCGACTTTGGCTTCTGTTGACGCTCTAGAGACATATACGCAGATATCTAGCCATCCCTTAAACAAAACTAGCAAACAGGGCATTATAGCTCTTGATATCCTTCATTCTAAGGACATAATCGCAACTGGAAATATTGATACAAATGCTGTTATTTTTGACCGTCCATCAGGACAAGTATTAGCTACACTTAGCGGTCACTCTAAAAAGGTAACAAGCGTGAAGTTTGTAGGTCAGGGTGAATCTATCATAACTGGTTCAGCAGATAAGACAGTTCGTTTGTGGCAAGGGTCAGATGATGGTCACTATAACTGCAAACAGATCTTGAAGGATCATTCTGCTGAAGTGGAAGCTGTCACTGTCCATGCCACCAATAATTACTTTGTGACTGCATCACTTGATGGCAGCTGGTGCTTTTATGAACTATCTTCAGGAACTTGTCTGACTCAGGTTTCTGACTCTTCCGAAGGCTATACATCTGCAGCTTTTCATCCCGATGGTCTTATTCTTGGAACTGGCACTACAGATTCTCTTGTTAAGATCTGGGATGTAAAAAGTCAGGCAAATGTTGCTAAGTTTGATGGACATGTCGGGCATGTAACTGCAATATCCTTTTCTGAGAATGGATACTACCTTGCGACCGCAGCTCATGATGGTGTAAAGCTTTGGGATCTACGCAAGTTGAAAAACTTCCGGGACTATGGCCCATATGACTCAGCAACTCCAACAAACTCTGTGGAGTTTGACCACAGTGGATCCTACCTTGCAGTTGCAGGCTCTGATGTTAGGATATTACAAGTTGCAAATGTGAAATCTGAATGGAACTTGATCAAAACTCTTCCTGATTTATCTGGAACAGGTAAATCCACATGTGTAAAATTCGGCCCAGATTCAAAATACTTAGCAGTTGCATCAATGGACCGGAATCTTCGAATATTTGGCCAACCTGGCGAAGATATTTCTGACAAATCATGA
Protein sequence

>Msa0016710

MNCSISGEVPDEPVVSKSSGLLFEKRLIERHIMDFGKCPVTGEPLTLDDIVPIKTGKIVKPRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSILAQAERQFPISTPNSVTANAPVHSNGKRAADDEELAPNAKKLHPGISSSIISELTDCNAALSGKRKKREIPATLASVDALETYTQISSHPLNKTSKQGIIALDILHSKDIIATGNIDTNAVIFDRPSGQVLATLSGHSKKVTSVKFVGQGESIITGSADKTVRLWQGSDDGHYNCKQILKDHSAEVEAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVSDSSEGYTSAAFHPDGLILGTGTTDSLVKIWDVKSQANVAKFDGHVGHVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRDYGPYDSATPTNSVEFDHSGSYLAVAGSDVRILQVANVKSEWNLIKTLPDLSGTGKSTCVKFGPDSKYLAVASMDRNLRIFGQPGEDISDKS*