Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289520 | XP_003595788.1 | 86.926 | 283 | 0 | 1 | 1 | 283 | 1 | 246 | 6.10e-176 | 495 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289520 | sp|O48551|PSA6_SOYBN | 81.272 | 283 | 16 | 1 | 1 | 283 | 1 | 246 | 1.48e-166 | 464 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289520 | G7IJ13 | 86.926 | 283 | 0 | 1 | 1 | 283 | 1 | 246 | 2.92e-176 | 495 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0020390 | Msa0289520 | 0.805167 | 1.521534e-49 | -8.615850e-47 |
Msa0118710 | Msa0289520 | 0.801940 | 7.101857e-49 | -8.615850e-47 |
Msa0188350 | Msa0289520 | 0.804822 | 1.796026e-49 | -8.615850e-47 |
Msa0202410 | Msa0289520 | 0.800028 | 1.746050e-48 | -8.615850e-47 |
Msa0206690 | Msa0289520 | 0.818190 | 2.230764e-52 | -8.615850e-47 |
Msa0289520 | Msa0357900 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
Msa0289520 | Msa0800370 | 0.813201 | 2.885343e-51 | -8.615850e-47 |
Msa0289520 | Msa1080290 | 0.801287 | 9.669976e-49 | -8.615850e-47 |
Msa0289520 | Msa1165780 | 0.800125 | 1.668559e-48 | -8.615850e-47 |
Msa0289520 | Msa1262890 | 0.814731 | 1.326672e-51 | -8.615850e-47 |
Msa0289520 | Msa1330270 | 0.808230 | 3.429992e-50 | -8.615850e-47 |
Msa0289520 | Msa1336560 | 0.809954 | 1.465519e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289520 | MtrunA17_Chr2g0308541 | 86.926 | 283 | 0 | 1 | 1 | 283 | 1 | 246 | 5.61e-180 | 495 |
Msa0289520 | MtrunA17_Chr8g0360781 | 81.272 | 283 | 16 | 1 | 1 | 283 | 1 | 246 | 6.29e-168 | 464 |
Msa0289520 | MtrunA17_Chr0c02g0489661 | 34.317 | 271 | 136 | 6 | 9 | 279 | 6 | 234 | 7.50e-45 | 151 |
Msa0289520 | MtrunA17_Chr7g0243311 | 37.945 | 253 | 141 | 7 | 9 | 258 | 5 | 244 | 1.69e-44 | 151 |
Msa0289520 | MtrunA17_Chr8g0371571 | 38.889 | 216 | 123 | 5 | 9 | 221 | 4 | 213 | 4.29e-39 | 137 |
Msa0289520 | MtrunA17_Chr5g0401801 | 40.933 | 193 | 106 | 5 | 9 | 198 | 5 | 192 | 7.84e-39 | 135 |
Msa0289520 | MtrunA17_Chr2g0283841 | 37.838 | 222 | 128 | 4 | 1 | 221 | 1 | 213 | 1.75e-38 | 135 |
Msa0289520 | MtrunA17_Chr1g0210811 | 35.961 | 203 | 123 | 4 | 9 | 208 | 8 | 206 | 2.25e-37 | 132 |
Msa0289520 | MtrunA17_Chr1g0155371 | 34.247 | 219 | 139 | 4 | 9 | 226 | 6 | 220 | 9.98e-37 | 132 |
Msa0289520 | MtrunA17_Chr6g0459741 | 35.227 | 176 | 112 | 2 | 6 | 181 | 5 | 178 | 8.58e-32 | 118 |
Msa0289520 | MtrunA17_Chr4g0004521 | 26.977 | 215 | 140 | 5 | 23 | 226 | 7 | 215 | 5.70e-20 | 87.0 |
Msa0289520 | MtrunA17_Chr4g0027841 | 25.000 | 224 | 148 | 5 | 12 | 226 | 91 | 303 | 2.93e-15 | 74.7 |
Msa0289520 | MtrunA17_Chr3g0142511 | 31.776 | 107 | 71 | 2 | 121 | 226 | 25 | 130 | 8.23e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0289520 | AT2G05840.1 | 76.325 | 283 | 30 | 1 | 1 | 283 | 1 | 246 | 6.22e-159 | 442 |
Msa0289520 | AT5G35590.1 | 75.265 | 283 | 33 | 1 | 1 | 283 | 1 | 246 | 8.18e-159 | 442 |
Msa0289520 | AT2G05840.2 | 88.889 | 216 | 24 | 0 | 1 | 216 | 1 | 216 | 2.75e-148 | 414 |
Msa0289520 | AT2G05840.3 | 88.265 | 196 | 23 | 0 | 1 | 196 | 1 | 196 | 8.83e-134 | 377 |
Msa0289520 | AT3G22110.1 | 35.714 | 252 | 148 | 6 | 9 | 258 | 5 | 244 | 3.93e-42 | 145 |
Msa0289520 | AT1G16470.1 | 33.579 | 271 | 138 | 6 | 9 | 279 | 6 | 234 | 1.15e-41 | 144 |
Msa0289520 | AT1G16470.2 | 33.579 | 271 | 138 | 6 | 9 | 279 | 6 | 234 | 1.15e-41 | 144 |
Msa0289520 | AT1G79210.1 | 33.579 | 271 | 138 | 6 | 9 | 279 | 6 | 234 | 2.35e-41 | 143 |
Msa0289520 | AT1G79210.2 | 33.579 | 271 | 138 | 6 | 9 | 279 | 6 | 234 | 2.35e-41 | 143 |
Msa0289520 | AT1G79210.3 | 33.579 | 271 | 138 | 6 | 9 | 279 | 6 | 234 | 2.35e-41 | 143 |
Msa0289520 | AT5G66140.1 | 37.963 | 216 | 125 | 5 | 9 | 221 | 4 | 213 | 1.84e-39 | 138 |
Msa0289520 | AT3G51260.1 | 38.426 | 216 | 124 | 5 | 9 | 221 | 4 | 213 | 1.92e-39 | 138 |
Msa0289520 | AT3G51260.2 | 38.571 | 210 | 120 | 5 | 9 | 215 | 4 | 207 | 2.27e-39 | 138 |
Msa0289520 | AT1G53850.1 | 36.946 | 203 | 121 | 4 | 9 | 208 | 8 | 206 | 2.73e-38 | 135 |
Msa0289520 | AT1G53850.2 | 36.946 | 203 | 121 | 4 | 9 | 208 | 8 | 206 | 2.73e-38 | 135 |
Msa0289520 | AT3G14290.1 | 36.453 | 203 | 122 | 4 | 9 | 208 | 8 | 206 | 6.41e-38 | 134 |
Msa0289520 | AT1G47250.1 | 36.199 | 221 | 132 | 6 | 9 | 226 | 6 | 220 | 1.23e-36 | 132 |
Msa0289520 | AT5G42790.1 | 35.747 | 221 | 133 | 6 | 9 | 226 | 6 | 220 | 3.75e-36 | 130 |
Msa0289520 | AT2G27020.1 | 33.333 | 186 | 116 | 4 | 6 | 185 | 5 | 188 | 7.71e-30 | 113 |
Msa0289520 | AT2G27020.2 | 33.514 | 185 | 115 | 4 | 6 | 184 | 107 | 289 | 4.03e-29 | 114 |
Msa0289520 | AT4G15165.1 | 30.556 | 252 | 119 | 8 | 9 | 258 | 5 | 202 | 4.89e-26 | 102 |
Find 99 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACCTAATTCTAGAGATTT+TGG | 0.130549 | 2_3:+35765284 | None:intergenic |
GCTGAGTTTCGCCATAAATT+TGG | 0.187140 | 2_3:-35769758 | Msa0289520:CDS |
CACTAAGTACCTTGGTTTAC+TGG | 0.207612 | 2_3:-35770411 | Msa0289520:CDS |
CTTCCAAAATCTCTAGAATT+AGG | 0.219479 | 2_3:-35765287 | Msa0289520:CDS |
GCATCTCATATCCAAATTTA+TGG | 0.224828 | 2_3:+35769747 | None:intergenic |
TCAAGAGGCAATTAATTTCT+TGG | 0.230260 | 2_3:-35766885 | Msa0289520:CDS |
CTACTGAGCTTTGTTGTTAT+AGG | 0.237750 | 2_3:+35772873 | None:intergenic |
ATCTTGGATTTGATTGGTTC+TGG | 0.253820 | 2_3:+35765345 | None:intergenic |
TTGGGAATTGATGACGAAAA+TGG | 0.280211 | 2_3:-35768889 | Msa0289520:CDS |
TACTGAGCTTTGTTGTTATA+GGG | 0.296133 | 2_3:+35772874 | None:intergenic |
TTGCGTCGTTACTCAGAAAA+AGG | 0.297194 | 2_3:-35770568 | Msa0289520:CDS |
ACATATACAAATTGAAATTT+CGG | 0.306121 | 2_3:-35765320 | Msa0289520:CDS |
CTGTGGATGTGTTGGCTAAA+TGG | 0.320318 | 2_3:-35769724 | Msa0289520:intron |
GCTGCTTAATTCGATTAAAC+TGG | 0.321997 | 2_3:+35764437 | None:intergenic |
CAATTTGTATATGTATATCT+TGG | 0.344671 | 2_3:+35765329 | None:intergenic |
GCGCGATTGAGTTATTAATA+AGG | 0.363487 | 2_3:-35764709 | Msa0289520:exon |
GTTAACAGAGTATGCTTTCA+AGG | 0.381831 | 2_3:-35770643 | Msa0289520:intron |
TCTTCAACATCAGTGCTATA+AGG | 0.393653 | 2_3:+35764620 | None:intergenic |
TATGAGGATAAAGTTTACTT+TGG | 0.398300 | 2_3:-35764392 | Msa0289520:three_prime_UTR |
TACCTTGGTTTACTGGCAAC+TGG | 0.402138 | 2_3:-35770404 | Msa0289520:CDS |
ATGTATATCTTGGATTTGAT+TGG | 0.403009 | 2_3:+35765339 | None:intergenic |
CTGCAAAGTTGCTATGGTCT+TGG | 0.414875 | 2_3:-35768908 | Msa0289520:intron |
TTATATATTACTTTCCCCTT+GGG | 0.415977 | 2_3:+35771276 | None:intergenic |
TTCAAGGCTGTTAAGGCCGC+AGG | 0.422354 | 2_3:-35770627 | Msa0289520:CDS |
TACCTATGATGAGACAGTTC+AGG | 0.429803 | 2_3:-35766834 | Msa0289520:intron |
GGTTCTGGAATTTCGATTGT+TGG | 0.431662 | 2_3:+35765360 | None:intergenic |
TTCATTGCAGGACAAGCTCT+TGG | 0.434795 | 2_3:-35770465 | Msa0289520:intron |
ACAAGTTGTACAATGTTTCA+AGG | 0.436098 | 2_3:+35764538 | None:intergenic |
TTTATATATTACTTTCCCCT+TGG | 0.451813 | 2_3:+35771275 | None:intergenic |
TGCAAAGTTGCTATGGTCTT+GGG | 0.454919 | 2_3:-35768907 | Msa0289520:intron |
GTGGACAAAACTCTAAATTC+TGG | 0.455023 | 2_3:+35764768 | None:intergenic |
TTCAGCTGATGCTAGGACAC+TGG | 0.456415 | 2_3:-35769804 | Msa0289520:intron |
TGTACTCAGGCCACAAGTGC+TGG | 0.456634 | 2_3:-35766917 | Msa0289520:intron |
TGGGAATTGATGACGAAAAT+GGG | 0.457659 | 2_3:-35768888 | Msa0289520:CDS |
GACCCTGCCGGGCATTACTT+TGG | 0.459387 | 2_3:-35768847 | Msa0289520:CDS |
TGACCAAAGTAATGCCCGGC+AGG | 0.467216 | 2_3:+35768844 | None:intergenic |
GTCTCATCATAGGTAAATGA+AGG | 0.468541 | 2_3:+35766842 | None:intergenic |
CAAAATCTCTAGAATTAGGT+TGG | 0.468964 | 2_3:-35765283 | Msa0289520:CDS |
ACTTGAAAGAGACGCCCCTC+GGG | 0.470636 | 2_3:+35771200 | None:intergenic |
GTATGCTTTCAAGGCTGTTA+AGG | 0.473677 | 2_3:-35770634 | Msa0289520:CDS |
CTAGGTTGGAGTGGTGCAAA+AGG | 0.481357 | 2_3:-35764796 | Msa0289520:intron |
TGCAGCATCAAGAAATTATG+AGG | 0.485196 | 2_3:-35764408 | Msa0289520:three_prime_UTR |
ATCCTTCGATCCAGCACTTG+TGG | 0.485211 | 2_3:+35766907 | None:intergenic |
GCCGCAGGGATAACCTCAAT+TGG | 0.487617 | 2_3:-35770612 | Msa0289520:CDS |
CAGAAGCATGATTGATTCGC+AGG | 0.488021 | 2_3:+35764569 | None:intergenic |
TTTACAAATGTGACCCTGCC+GGG | 0.490064 | 2_3:-35768858 | Msa0289520:CDS |
TCATTCTCTTTCTTATCCCA+AGG | 0.493297 | 2_3:-35771292 | Msa0289520:five_prime_UTR |
AACTCAATCGCGCTCGCTGA+TGG | 0.493385 | 2_3:+35764719 | None:intergenic |
AGCTGTGTCTTTGAACAAGT+TGG | 0.493868 | 2_3:-35772852 | Msa0289520:five_prime_UTR |
TTTCCCATCACTAAGTACCT+TGG | 0.495984 | 2_3:-35770419 | Msa0289520:CDS |
TACCTGAACTGTCTCATCAT+AGG | 0.502050 | 2_3:+35766832 | None:intergenic |
GTTTCCTCGGACACCAATTG+AGG | 0.514352 | 2_3:+35770599 | None:intergenic |
CTTTACAAATGTGACCCTGC+CGG | 0.517868 | 2_3:-35768859 | Msa0289520:CDS |
TTACTGGCAACTGGCATGAC+AGG | 0.518842 | 2_3:-35770395 | Msa0289520:intron |
CACTTGAAAGAGACGCCCCT+CGG | 0.521556 | 2_3:+35771199 | None:intergenic |
CATTCTCTTTCTTATCCCAA+GGG | 0.523245 | 2_3:-35771291 | Msa0289520:five_prime_UTR |
TATTTGCTTCTATTACAAGT+TGG | 0.525528 | 2_3:-35764594 | Msa0289520:three_prime_UTR |
CTTGCAATCAGTTCTTCAAG+AGG | 0.529591 | 2_3:-35765924 | Msa0289520:CDS |
ATAAACATGAGTCGAGGAAG+TGG | 0.531301 | 2_3:-35771257 | Msa0289520:exon |
ATGAGTCGAGGAAGTGGAGG+TGG | 0.536279 | 2_3:-35771251 | Msa0289520:CDS |
CGAGGGGCGTCTCTTTCAAG+TGG | 0.547448 | 2_3:-35771198 | Msa0289520:CDS |
CGCAAACAGAATCGTTTCCT+CGG | 0.548376 | 2_3:+35770586 | None:intergenic |
GGCCACAAGTGCTGGATCGA+AGG | 0.550812 | 2_3:-35766909 | Msa0289520:CDS |
TAAACCAAGGTACTTAGTGA+TGG | 0.555581 | 2_3:+35770415 | None:intergenic |
CTCTTGAAGAACTGATTGCA+AGG | 0.559622 | 2_3:+35765925 | None:intergenic |
GAAACATTGTACAACTTGTG+TGG | 0.562180 | 2_3:-35764534 | Msa0289520:three_prime_UTR |
AAACCAAGGTACTTAGTGAT+GGG | 0.562271 | 2_3:+35770416 | None:intergenic |
GAAAGTCATCATCATCATCC+AGG | 0.563645 | 2_3:-35772821 | Msa0289520:intron |
CATTTAGCCAACACATCCAC+AGG | 0.565773 | 2_3:+35769725 | None:intergenic |
CATGCTTATATGAGACCACT+AGG | 0.569233 | 2_3:-35769071 | Msa0289520:CDS |
CAAGTGCTCGTCGATTTCCT+CGG | 0.572807 | 2_3:+35764746 | None:intergenic |
CGGGCATTACTTTGGTCACA+AGG | 0.578471 | 2_3:-35768839 | Msa0289520:intron |
GGGTCACATTTGTAAAGTTG+AGG | 0.580213 | 2_3:+35768865 | None:intergenic |
TGCTGGATCGAAGGATCAAG+AGG | 0.587729 | 2_3:-35766900 | Msa0289520:CDS |
ATTGTGCTGCAAAGTTGCTA+TGG | 0.590145 | 2_3:-35768914 | Msa0289520:intron |
CTTGTGACCAAAGTAATGCC+CGG | 0.591715 | 2_3:+35768840 | None:intergenic |
ATATGCTCTCAACACAGGAT+AGG | 0.595259 | 2_3:+35764468 | None:intergenic |
TGAGATGCCTGTGGATGTGT+TGG | 0.595670 | 2_3:-35769732 | Msa0289520:CDS |
TTGAGTTGAACAAAGAGTGA+GGG | 0.607312 | 2_3:-35764495 | Msa0289520:three_prime_UTR |
GAATGATATGCTCTCAACAC+AGG | 0.613064 | 2_3:+35764463 | None:intergenic |
TATATGAGACCACTAGGAGT+AGG | 0.613786 | 2_3:-35769065 | Msa0289520:intron |
AAACATTGTACAACTTGTGT+GGG | 0.621053 | 2_3:-35764533 | Msa0289520:three_prime_UTR |
GACCAAAGTAATGCCCGGCA+GGG | 0.621604 | 2_3:+35768845 | None:intergenic |
GTGCTCGTCGATTTCCTCGG+TGG | 0.630932 | 2_3:+35764749 | None:intergenic |
AACATGAGTCGAGGAAGTGG+AGG | 0.632274 | 2_3:-35771254 | Msa0289520:CDS |
TCAAGGCTGTTAAGGCCGCA+GGG | 0.635784 | 2_3:-35770626 | Msa0289520:CDS |
TTTGAGTTGAACAAAGAGTG+AGG | 0.636456 | 2_3:-35764496 | Msa0289520:three_prime_UTR |
GAGGGGCGTCTCTTTCAAGT+GGG | 0.638985 | 2_3:-35771197 | Msa0289520:intron |
ATTCTCTTTCTTATCCCAAG+GGG | 0.640570 | 2_3:-35771290 | Msa0289520:five_prime_UTR |
TCTCATCATAGGTAAATGAA+GGG | 0.646694 | 2_3:+35766843 | None:intergenic |
ATAACCTCAATTGGTGTCCG+AGG | 0.651433 | 2_3:-35770603 | Msa0289520:CDS |
TTGAAAGAGACGCCCCTCGG+GGG | 0.652662 | 2_3:+35771202 | None:intergenic |
AGTTGAACAAAGAGTGAGGG+CGG | 0.659341 | 2_3:-35764492 | Msa0289520:three_prime_UTR |
CTTGAAAGAGACGCCCCTCG+GGG | 0.667484 | 2_3:+35771201 | None:intergenic |
TAATATATAAACATGAGTCG+AGG | 0.668937 | 2_3:-35771263 | Msa0289520:exon |
TGCCAGTTGCCAGTAAACCA+AGG | 0.669415 | 2_3:+35770402 | None:intergenic |
ACCAATTGAGGTTATCCCTG+CGG | 0.697474 | 2_3:+35770611 | None:intergenic |
AAATTATACCTCAATCTCAG+TGG | 0.698073 | 2_3:+35765892 | None:intergenic |
ATTTGGATATGAGATGCCTG+TGG | 0.719306 | 2_3:-35769741 | Msa0289520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAAAAAAAAATAA+AGG | + | chr2_3:35771330-35771349 | None:intergenic | 0.0% |
!!! | TAATATTGAATTTTGAAAAA+TGG | + | chr2_3:35765462-35765481 | None:intergenic | 10.0% |
!! | TAATTTATTAATCATACTTT+GGG | + | chr2_3:35767230-35767249 | None:intergenic | 10.0% |
!! | TTAATTTATTAATCATACTT+TGG | + | chr2_3:35767231-35767250 | None:intergenic | 10.0% |
!!! | TATTTTTTTGCTTATAATTT+GGG | + | chr2_3:35770757-35770776 | None:intergenic | 10.0% |
!! | AATTAAATATGATAAAAGTT+GGG | + | chr2_3:35770817-35770836 | None:intergenic | 10.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr2_3:35770818-35770837 | None:intergenic | 10.0% |
!!! | ACTCTTTATTTTAATTATTT+AGG | - | chr2_3:35771478-35771497 | Msa0289520:intron | 10.0% |
!! | ATTCAAAAGTAAAACAAAAT+GGG | + | chr2_3:35766205-35766224 | None:intergenic | 15.0% |
!! | CATCTAGTAAAATATAAATT+AGG | - | chr2_3:35767061-35767080 | Msa0289520:intron | 15.0% |
!! | AAATTCTTTAATAGTAAACA+TGG | - | chr2_3:35767786-35767805 | Msa0289520:intron | 15.0% |
!!! | TTTTAATCATTCATACAAAT+AGG | + | chr2_3:35767874-35767893 | None:intergenic | 15.0% |
!! | TAATTACACATATTATTTAG+GGG | + | chr2_3:35767921-35767940 | None:intergenic | 15.0% |
!! | GTAATTACACATATTATTTA+GGG | + | chr2_3:35767922-35767941 | None:intergenic | 15.0% |
!!! | ATAGAATAAATAATGGAATA+TGG | + | chr2_3:35768700-35768719 | None:intergenic | 15.0% |
!! | TACTCTAATAGAATAAATAA+TGG | + | chr2_3:35768707-35768726 | None:intergenic | 15.0% |
!!! | ACAACTTTTTCTTTTTTTTT+TGG | + | chr2_3:35768981-35769000 | None:intergenic | 15.0% |
!!! | TTTTATCTCACATTAATAAA+AGG | - | chr2_3:35769115-35769134 | Msa0289520:intron | 15.0% |
!! | GCATTATTATGAATTTATAA+TGG | + | chr2_3:35769278-35769297 | None:intergenic | 15.0% |
!! | ATGAAATAAAAAATTTAGGT+GGG | + | chr2_3:35769349-35769368 | None:intergenic | 15.0% |
!! | AAGGATGAAATAAAAAATTT+AGG | + | chr2_3:35769353-35769372 | None:intergenic | 15.0% |
!!! | AAACATTACTTTTCATTTTA+AGG | - | chr2_3:35769868-35769887 | Msa0289520:intron | 15.0% |
!! | TAATTCAACAAATTATTCAA+GGG | - | chr2_3:35769921-35769940 | Msa0289520:intron | 15.0% |
!!! | GTATTTTTTTGCTTATAATT+TGG | + | chr2_3:35770758-35770777 | None:intergenic | 15.0% |
!!! | GTATTTTTTGCTTATAATTT+GGG | + | chr2_3:35770794-35770813 | None:intergenic | 15.0% |
!! | ATTAAATATGATAAAAGTTG+GGG | + | chr2_3:35770816-35770835 | None:intergenic | 15.0% |
!!! | TTTTGCATTTAATTTCTTTT+TGG | + | chr2_3:35770867-35770886 | None:intergenic | 15.0% |
!!! | ATTTCTTTTGCTTATAATTT+GGG | - | chr2_3:35771038-35771057 | Msa0289520:intron | 15.0% |
!!! | TTAGTTGTTATTTTATTAGT+GGG | + | chr2_3:35771238-35771257 | None:intergenic | 15.0% |
!!! | ATTAGTTGTTATTTTATTAG+TGG | + | chr2_3:35771239-35771258 | None:intergenic | 15.0% |
!! | ACATATACAAATTGAAATTT+CGG | - | chr2_3:35771971-35771990 | Msa0289520:intron | 15.0% |
!! | AGTAATTGTAATTTCATTTA+GGG | - | chr2_3:35772052-35772071 | Msa0289520:intron | 15.0% |
!!! | GTTTGGTTATTTTATTAAAT+GGG | - | chr2_3:35772206-35772225 | Msa0289520:intron | 15.0% |
!!! | AAACAATTTAAAGTCTAGAA+AGG | + | chr2_3:35764684-35764703 | None:intergenic | 20.0% |
!!! | CTCTTTTTATAAAAATAGTC+AGG | + | chr2_3:35765196-35765215 | None:intergenic | 20.0% |
!!! | TCAAATTAGTCAATTTTAAC+AGG | - | chr2_3:35765382-35765401 | Msa0289520:intron | 20.0% |
!!! | ATCATATTTTTGTTTGTGTA+AGG | - | chr2_3:35765579-35765598 | Msa0289520:intron | 20.0% |
!!! | TCATATTTTTGTTTGTGTAA+GGG | - | chr2_3:35765580-35765599 | Msa0289520:intron | 20.0% |
!! | CATTCAAAAGTAAAACAAAA+TGG | + | chr2_3:35766206-35766225 | None:intergenic | 20.0% |
!!! | TTTTGTTTTACTTTTGAATG+TGG | - | chr2_3:35766206-35766225 | Msa0289520:intron | 20.0% |
!!! | TTTGTTTTACTTTTGAATGT+GGG | - | chr2_3:35766207-35766226 | Msa0289520:intron | 20.0% |
!!! | GACTATCTAAATTGATTTTA+AGG | - | chr2_3:35766302-35766321 | Msa0289520:intron | 20.0% |
!!! | TGTTAACATCAATCTAAAAT+TGG | - | chr2_3:35766465-35766484 | Msa0289520:intron | 20.0% |
!!! | GTTAACATCAATCTAAAATT+GGG | - | chr2_3:35766466-35766485 | Msa0289520:intron | 20.0% |
!! | TTTCATGTTAAAGTTAATAC+AGG | - | chr2_3:35767005-35767024 | Msa0289520:intron | 20.0% |
!! | ATCCCAAATAAAAAATAGAT+GGG | + | chr2_3:35767179-35767198 | None:intergenic | 20.0% |
!! | TAAGTATAGACTATAGATAA+TGG | - | chr2_3:35767338-35767357 | Msa0289520:intron | 20.0% |
!! | ATATATCATAGTTCAACTTA+TGG | + | chr2_3:35767377-35767396 | None:intergenic | 20.0% |
!!! | AATTTTTTTCATTACTGATC+AGG | + | chr2_3:35767771-35767790 | None:intergenic | 20.0% |
!! | CGTAATTACACATATTATTT+AGG | + | chr2_3:35767923-35767942 | None:intergenic | 20.0% |
!! | CATTATTATAATACATCTGT+TGG | - | chr2_3:35768048-35768067 | Msa0289520:intron | 20.0% |
!! | GATGAAATAAAAAATTTAGG+TGG | + | chr2_3:35769350-35769369 | None:intergenic | 20.0% |
!! | CTAATTCAACAAATTATTCA+AGG | - | chr2_3:35769920-35769939 | Msa0289520:intron | 20.0% |
!!! | TTCAAGGGATTTTAATTAAA+TGG | - | chr2_3:35769936-35769955 | Msa0289520:intron | 20.0% |
!! | TCATACATATATGATATGTA+TGG | - | chr2_3:35770116-35770135 | Msa0289520:intron | 20.0% |
!! | TTAAAAACAAAAAAGTTCCA+AGG | + | chr2_3:35770602-35770621 | None:intergenic | 20.0% |
!!! | TTGGAACTTTTTTGTTTTTA+AGG | - | chr2_3:35770601-35770620 | Msa0289520:CDS | 20.0% |
!!! | TGGAACTTTTTTGTTTTTAA+GGG | - | chr2_3:35770602-35770621 | Msa0289520:CDS | 20.0% |
!!! | GGTATTTTTTGCTTATAATT+TGG | + | chr2_3:35770795-35770814 | None:intergenic | 20.0% |
!! | TAGTTATAGAGAAAATGAAA+GGG | + | chr2_3:35770907-35770926 | None:intergenic | 20.0% |
!! | TTAGTTATAGAGAAAATGAA+AGG | + | chr2_3:35770908-35770927 | None:intergenic | 20.0% |
!!! | ATAATTTTTTGTGTTATCCT+TGG | + | chr2_3:35770974-35770993 | None:intergenic | 20.0% |
!!! | GATTTCTTTTGCTTATAATT+TGG | - | chr2_3:35771037-35771056 | Msa0289520:intron | 20.0% |
!!! | TAGTTGTTATTTTATTAGTG+GGG | + | chr2_3:35771237-35771256 | None:intergenic | 20.0% |
!! | ACATCATGTTAATTGAAATT+TGG | - | chr2_3:35771448-35771467 | Msa0289520:intron | 20.0% |
!!! | ATTATTTGGTTTGTTCATTT+AGG | + | chr2_3:35771723-35771742 | None:intergenic | 20.0% |
!! | AAATGAACAAACCAAATAAT+AGG | - | chr2_3:35771723-35771742 | Msa0289520:intron | 20.0% |
!! | CAAAATAAATTTGACTCAAA+TGG | + | chr2_3:35771764-35771783 | None:intergenic | 20.0% |
!! | CAATTTGTATATGTATATCT+TGG | + | chr2_3:35771965-35771984 | None:intergenic | 20.0% |
!! | GAGTAATTGTAATTTCATTT+AGG | - | chr2_3:35772051-35772070 | Msa0289520:intron | 20.0% |
!!! | GGTTTGGTTATTTTATTAAA+TGG | - | chr2_3:35772205-35772224 | Msa0289520:intron | 20.0% |
!!! | CATGTTTTGTTTGTTCAATT+AGG | - | chr2_3:35764827-35764846 | Msa0289520:intron | 25.0% |
! | AAATAAGTTGTGAATAGCAT+AGG | + | chr2_3:35765122-35765141 | None:intergenic | 25.0% |
!!! | GCTATTCACAACTTATTTTT+AGG | - | chr2_3:35765124-35765143 | Msa0289520:intron | 25.0% |
!!! | CTTATTTTTAGGAGAACTTA+TGG | - | chr2_3:35765135-35765154 | Msa0289520:intron | 25.0% |
! | TGATTGGATAAACAACTAAT+TGG | + | chr2_3:35765170-35765189 | None:intergenic | 25.0% |
! | AATTAGTTGTTTATCCAATC+AGG | - | chr2_3:35765169-35765188 | Msa0289520:intron | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | - | chr2_3:35765293-35765312 | Msa0289520:CDS | 25.0% |
!! | TACTAAGAATTTAAAGCTTC+TGG | + | chr2_3:35765803-35765822 | None:intergenic | 25.0% |
!! | TCTTAGTAAAGTTGTCATTT+AGG | - | chr2_3:35765815-35765834 | Msa0289520:intron | 25.0% |
!!! | TTTTTTTCTTCTCTAAGTGT+TGG | + | chr2_3:35765968-35765987 | None:intergenic | 25.0% |
! | TTATATATTACTTTCCCCTT+GGG | + | chr2_3:35766018-35766037 | None:intergenic | 25.0% |
! | TTTATATATTACTTTCCCCT+TGG | + | chr2_3:35766019-35766038 | None:intergenic | 25.0% |
! | TAATATATAAACATGAGTCG+AGG | - | chr2_3:35766028-35766047 | Msa0289520:intron | 25.0% |
!! | ATTGATTTATTCACACTTTC+TGG | - | chr2_3:35766418-35766437 | Msa0289520:intron | 25.0% |
!!! | TTAGACTTTATTTTGCTTGT+AGG | - | chr2_3:35766772-35766791 | Msa0289520:intron | 25.0% |
!! | TAAGTTGAAATATTCATTGC+AGG | - | chr2_3:35766814-35766833 | Msa0289520:intron | 25.0% |
!! | TTTTACTAGATGCAATAAAG+TGG | + | chr2_3:35767053-35767072 | None:intergenic | 25.0% |
! | AAACCTGATATTATCTGAAA+CGG | - | chr2_3:35767091-35767110 | Msa0289520:intron | 25.0% |
!!! | CACCCATCTATTTTTTATTT+GGG | - | chr2_3:35767174-35767193 | Msa0289520:intron | 25.0% |
! | CATCCCAAATAAAAAATAGA+TGG | + | chr2_3:35767180-35767199 | None:intergenic | 25.0% |
! | TCTGTAATCATATATCTAGT+TGG | + | chr2_3:35767317-35767336 | None:intergenic | 25.0% |
! | ACAAAAATATCTTATCGTGT+TGG | - | chr2_3:35767454-35767473 | Msa0289520:intron | 25.0% |
! | AAATCATAATAGGCTAACAA+CGG | + | chr2_3:35767663-35767682 | None:intergenic | 25.0% |
!! | TTGTTAGCCTATTATGATTT+AGG | - | chr2_3:35767663-35767682 | Msa0289520:intron | 25.0% |
! | GATGTTTCCTAAATCATAAT+AGG | + | chr2_3:35767673-35767692 | None:intergenic | 25.0% |
!!! | AGAACATTTTGAGTAAGAAA+TGG | + | chr2_3:35767732-35767751 | None:intergenic | 25.0% |
!!! | CATGGCAATTTAATTTTATG+TGG | - | chr2_3:35767804-35767823 | Msa0289520:intron | 25.0% |
! | AATAAAAGAATTACATGCAG+TGG | + | chr2_3:35767993-35768012 | None:intergenic | 25.0% |
! | GTTCAAAAGTTATCACAAAA+TGG | + | chr2_3:35768777-35768796 | None:intergenic | 25.0% |
!! | ACCATTTTATAACAGCTTTT+GGG | + | chr2_3:35768889-35768908 | None:intergenic | 25.0% |
!! | AACCATTTTATAACAGCTTT+TGG | + | chr2_3:35768890-35768909 | None:intergenic | 25.0% |
!! | AGGAATTGGTTTAGTATAAA+AGG | - | chr2_3:35769411-35769430 | Msa0289520:intron | 25.0% |
! | ATGCAAGAAAATGATAAACT+AGG | - | chr2_3:35769541-35769560 | Msa0289520:intron | 25.0% |
! | TTGTATATAACAGAAAGAGA+GGG | + | chr2_3:35769635-35769654 | None:intergenic | 25.0% |
!!! | TTTTCATTTTAAGGCACATT+TGG | - | chr2_3:35769877-35769896 | Msa0289520:intron | 25.0% |
!!! | TTTCATTTTAAGGCACATTT+GGG | - | chr2_3:35769878-35769897 | Msa0289520:intron | 25.0% |
! | AGAGCTTATTGAATGAAATA+AGG | - | chr2_3:35769980-35769999 | Msa0289520:intron | 25.0% |
! | AATAAGGTGAAAACAACTTA+TGG | - | chr2_3:35769996-35770015 | Msa0289520:intron | 25.0% |
! | AAAAGTTATTTATACGAGTG+TGG | - | chr2_3:35770025-35770044 | Msa0289520:intron | 25.0% |
! | TAATGTAAAAGAAGATCAAG+AGG | + | chr2_3:35770508-35770527 | None:intergenic | 25.0% |
!!! | GGAACTTTTTTGTTTTTAAG+GGG | - | chr2_3:35770603-35770622 | Msa0289520:CDS | 25.0% |
!!! | GAACTTTTTTGTTTTTAAGG+GGG | - | chr2_3:35770604-35770623 | Msa0289520:CDS | 25.0% |
! | CAAAAAAAGAGGGAAAATAA+GGG | + | chr2_3:35770693-35770712 | None:intergenic | 25.0% |
! | AAATAGTTGCCAAAAAAAGA+GGG | + | chr2_3:35770703-35770722 | None:intergenic | 25.0% |
! | AAAATAGTTGCCAAAAAAAG+AGG | + | chr2_3:35770704-35770723 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATTTGGGA+AGG | + | chr2_3:35770753-35770772 | None:intergenic | 25.0% |
! | TTTCTATGAAACTTATTCCA+AGG | - | chr2_3:35770954-35770973 | Msa0289520:intron | 25.0% |
!! | TTTAAAGCATGATCATGTAA+CGG | + | chr2_3:35771292-35771311 | None:intergenic | 25.0% |
! | AGATGATTAATAACTAATGC+AGG | - | chr2_3:35771668-35771687 | Msa0289520:intron | 25.0% |
! | ATTAATAACTAATGCAGGTA+GGG | - | chr2_3:35771673-35771692 | Msa0289520:intron | 25.0% |
! | AACAAACCAAATAATAGGTT+TGG | - | chr2_3:35771728-35771747 | Msa0289520:intron | 25.0% |
! | TGAAAACCAAACCTATTATT+TGG | + | chr2_3:35771737-35771756 | None:intergenic | 25.0% |
! | ATGTATATCTTGGATTTGAT+TGG | + | chr2_3:35771955-35771974 | None:intergenic | 25.0% |
!! | TAATTTCATTTAGGGTTCAA+TGG | - | chr2_3:35772060-35772079 | Msa0289520:intron | 25.0% |
!!! | GTTATTTTATTAAATGGGCT+GGG | - | chr2_3:35772211-35772230 | Msa0289520:intron | 25.0% |
!! | CTCTAAAAAATGGAATTGTT+TGG | - | chr2_3:35772234-35772253 | Msa0289520:intron | 25.0% |
! | TTAGGAATGATTAAAATTCG+TGG | - | chr2_3:35772458-35772477 | Msa0289520:intron | 25.0% |
!!! | TTATTTTGCATTTTCTAGGT+TGG | - | chr2_3:35772481-35772500 | Msa0289520:intron | 25.0% |
! | TATTTGCTTCTATTACAAGT+TGG | - | chr2_3:35772697-35772716 | Msa0289520:intron | 25.0% |
! | TATGAGGATAAAGTTTACTT+TGG | - | chr2_3:35772899-35772918 | Msa0289520:five_prime_UTR | 25.0% |
!! | TTGTTGTTATAGGGTTTTAC+TGG | + | chr2_3:35764411-35764430 | None:intergenic | 30.0% |
!! | TACTGAGCTTTGTTGTTATA+GGG | + | chr2_3:35764420-35764439 | None:intergenic | 30.0% |
CAGATTCAAAAAAGACATTG+AGG | + | chr2_3:35764621-35764640 | None:intergenic | 30.0% | |
TCTGAGTAATAAGAAGATCA+CGG | - | chr2_3:35764637-35764656 | Msa0289520:three_prime_UTR | 30.0% | |
GTTATGCAACAAACAAGTAT+AGG | + | chr2_3:35764808-35764827 | None:intergenic | 30.0% | |
TGTTCAATTAGGAAACATCA+TGG | - | chr2_3:35764838-35764857 | Msa0289520:intron | 30.0% | |
!!! | ATGGTCTTGTGCTTTTAATT+AGG | - | chr2_3:35764857-35764876 | Msa0289520:intron | 30.0% |
TAAGCTATCTTGGAGAATTA+GGG | + | chr2_3:35765038-35765057 | None:intergenic | 30.0% | |
ATAAGCTATCTTGGAGAATT+AGG | + | chr2_3:35765039-35765058 | None:intergenic | 30.0% | |
TTTCATTTCATAATCTAGCC+TGG | - | chr2_3:35765258-35765277 | Msa0289520:intron | 30.0% | |
AAGAAGAAGAATAGTCTTTG+GGG | + | chr2_3:35765408-35765427 | None:intergenic | 30.0% | |
GAAGAAGAAGAATAGTCTTT+GGG | + | chr2_3:35765409-35765428 | None:intergenic | 30.0% | |
AGAAGAAGAAGAATAGTCTT+TGG | + | chr2_3:35765410-35765429 | None:intergenic | 30.0% | |
!! | CAATCAACGTTTTGTTCAAT+AGG | + | chr2_3:35765536-35765555 | None:intergenic | 30.0% |
ACCAATCATAGAAAGTAAAC+AGG | - | chr2_3:35765692-35765711 | Msa0289520:intron | 30.0% | |
GCTGATAAAATTCGTATCAT+GGG | - | chr2_3:35765714-35765733 | Msa0289520:intron | 30.0% | |
! | TAGTGAAACGTTTTACAATG+TGG | - | chr2_3:35766153-35766172 | Msa0289520:intron | 30.0% |
!!! | TTTTTTGGGTAGAAACATGA+GGG | + | chr2_3:35766352-35766371 | None:intergenic | 30.0% |
!!! | TTTTTTTGGGTAGAAACATG+AGG | + | chr2_3:35766353-35766372 | None:intergenic | 30.0% |
! | TCATGTTTCTACCCAAAAAA+AGG | - | chr2_3:35766352-35766371 | Msa0289520:intron | 30.0% |
TTTGTGATGACAAATTCAAG+TGG | + | chr2_3:35766496-35766515 | None:intergenic | 30.0% | |
TACAATGCTGTGTAAATCTT+TGG | + | chr2_3:35766519-35766538 | None:intergenic | 30.0% | |
ATTTACACAGCATTGTAATG+AGG | - | chr2_3:35766522-35766541 | Msa0289520:intron | 30.0% | |
!! | TTGAATTGAGTTGACTAGTT+TGG | - | chr2_3:35766598-35766617 | Msa0289520:intron | 30.0% |
!!! | GCACCCATCTATTTTTTATT+TGG | - | chr2_3:35767173-35767192 | Msa0289520:intron | 30.0% |
CAACTATGATAGTACAATTC+AGG | + | chr2_3:35767278-35767297 | None:intergenic | 30.0% | |
GCATCTCATATCCAAATTTA+TGG | + | chr2_3:35767547-35767566 | None:intergenic | 30.0% | |
!! | CATTTTGAGTAAGAAATGGT+AGG | + | chr2_3:35767728-35767747 | None:intergenic | 30.0% |
AAAATGTTCTGATTTCTGAC+AGG | - | chr2_3:35767742-35767761 | Msa0289520:intron | 30.0% | |
AAATGTTCTGATTTCTGACA+GGG | - | chr2_3:35767743-35767762 | Msa0289520:intron | 30.0% | |
! | TATTGCAATCTAAGAGCATA+CGG | + | chr2_3:35768027-35768046 | None:intergenic | 30.0% |
GTGTAAAAGAATACACAAGT+CGG | + | chr2_3:35768163-35768182 | None:intergenic | 30.0% | |
AAAAATTTACCTACTCCTAG+TGG | + | chr2_3:35768238-35768257 | None:intergenic | 30.0% | |
TGATGATATAATGTCGTGTA+TGG | - | chr2_3:35768288-35768307 | Msa0289520:intron | 30.0% | |
CGCAAAAATAACAGAGAAAA+AGG | + | chr2_3:35768840-35768859 | None:intergenic | 30.0% | |
!!! | TCTGTTATTTTTGCGCAATA+AGG | - | chr2_3:35768845-35768864 | Msa0289520:CDS | 30.0% |
TCCCAAAAGCTGTTATAAAA+TGG | - | chr2_3:35768885-35768904 | Msa0289520:CDS | 30.0% | |
ACAGATATTAACAGATGGTT+AGG | + | chr2_3:35769022-35769041 | None:intergenic | 30.0% | |
ATTGCACAGATATTAACAGA+TGG | + | chr2_3:35769027-35769046 | None:intergenic | 30.0% | |
!!! | TGAAGACTCGTATTTTAACA+GGG | + | chr2_3:35769326-35769345 | None:intergenic | 30.0% |
TACCTTTGTAGAACTATGAT+AGG | - | chr2_3:35769391-35769410 | Msa0289520:intron | 30.0% | |
! | TTCCTATCATAGTTCTACAA+AGG | + | chr2_3:35769396-35769415 | None:intergenic | 30.0% |
TGTAGAACTATGATAGGAAT+TGG | - | chr2_3:35769397-35769416 | Msa0289520:intron | 30.0% | |
!! | GAATTTGTTAGACAAGTCTA+GGG | + | chr2_3:35769593-35769612 | None:intergenic | 30.0% |
TGTATATAACAGAAAGAGAG+GGG | + | chr2_3:35769634-35769653 | None:intergenic | 30.0% | |
GTTGTATATAACAGAAAGAG+AGG | + | chr2_3:35769636-35769655 | None:intergenic | 30.0% | |
! | GAAGCTATCAATCTAGAATA+TGG | - | chr2_3:35769775-35769794 | Msa0289520:CDS | 30.0% |
GAAAATGATTAGAGATGCAT+TGG | + | chr2_3:35769806-35769825 | None:intergenic | 30.0% | |
CAATGCACATCACTATATAT+AGG | + | chr2_3:35770213-35770232 | None:intergenic | 30.0% | |
GTCTACAAGTGCATATAATT+GGG | + | chr2_3:35770317-35770336 | None:intergenic | 30.0% | |
TGTCTACAAGTGCATATAAT+TGG | + | chr2_3:35770318-35770337 | None:intergenic | 30.0% | |
! | GATTTTATTGTGATGTACTC+AGG | - | chr2_3:35770361-35770380 | Msa0289520:intron | 30.0% |
TCAAGAGGCAATTAATTTCT+TGG | - | chr2_3:35770406-35770425 | Msa0289520:CDS | 30.0% | |
TCTCATCATAGGTAAATGAA+GGG | + | chr2_3:35770451-35770470 | None:intergenic | 30.0% | |
!!! | TAGTCTTAGCTGGATTTTTT+TGG | - | chr2_3:35770545-35770564 | Msa0289520:intron | 30.0% |
! | GCATACACAATGAATGTTTT+TGG | - | chr2_3:35770667-35770686 | Msa0289520:intron | 30.0% |
CCAAAAAAAGAGGGAAAATA+AGG | + | chr2_3:35770694-35770713 | None:intergenic | 30.0% | |
!!! | CCTTATTTTCCCTCTTTTTT+TGG | - | chr2_3:35770691-35770710 | Msa0289520:intron | 30.0% |
! | CTTTTGCTTATAATTTGGGA+TGG | - | chr2_3:35771042-35771061 | Msa0289520:intron | 30.0% |
! | AGTTCTTCAAGAGGATTTTA+AGG | - | chr2_3:35771376-35771395 | Msa0289520:intron | 30.0% |
AAATTATACCTCAATCTCAG+TGG | + | chr2_3:35771402-35771421 | None:intergenic | 30.0% | |
TTCAATTAACATGATGTCAC+AGG | + | chr2_3:35771445-35771464 | None:intergenic | 30.0% | |
ATAAATGATGCAGCACTTAA+GGG | + | chr2_3:35771522-35771541 | None:intergenic | 30.0% | |
AATAAATGATGCAGCACTTA+AGG | + | chr2_3:35771523-35771542 | None:intergenic | 30.0% | |
GATTAATAACTAATGCAGGT+AGG | - | chr2_3:35771672-35771691 | Msa0289520:intron | 30.0% | |
TTAATAACTAATGCAGGTAG+GGG | - | chr2_3:35771674-35771693 | Msa0289520:intron | 30.0% | |
!! | TTGGTTTGTTCATTTAGGTT+TGG | + | chr2_3:35771718-35771737 | None:intergenic | 30.0% |
TTGATGAAACAGTTTGTAAC+CGG | - | chr2_3:35771781-35771800 | Msa0289520:intron | 30.0% | |
!! | TAGAGATTTTGGAAGAGATT+TGG | + | chr2_3:35771999-35772018 | None:intergenic | 30.0% |
!! | CTTCCAAAATCTCTAGAATT+AGG | - | chr2_3:35772004-35772023 | Msa0289520:intron | 30.0% |
!! | CAACCTAATTCTAGAGATTT+TGG | + | chr2_3:35772010-35772029 | None:intergenic | 30.0% |
!! | CAAAATCTCTAGAATTAGGT+TGG | - | chr2_3:35772008-35772027 | Msa0289520:intron | 30.0% |
!!! | TAGAATTAGGTTGGTTTTGA+AGG | - | chr2_3:35772017-35772036 | Msa0289520:intron | 30.0% |
!! | GGTTATTTTATTAAATGGGC+TGG | - | chr2_3:35772210-35772229 | Msa0289520:intron | 30.0% |
! | TATAAGTTACATACTTGCTG+TGG | - | chr2_3:35772369-35772388 | Msa0289520:intron | 30.0% |
! | GAAATTTTCGTTCGAAAGTT+AGG | - | chr2_3:35772440-35772459 | Msa0289520:intron | 30.0% |
!! | GTGGTTATTTTGCATTTTCT+AGG | - | chr2_3:35772477-35772496 | Msa0289520:intron | 30.0% |
ACAAGTTGTACAATGTTTCA+AGG | + | chr2_3:35772756-35772775 | None:intergenic | 30.0% | |
AAACATTGTACAACTTGTGT+GGG | - | chr2_3:35772758-35772777 | Msa0289520:intron | 30.0% | |
!! | CTACTGAGCTTTGTTGTTAT+AGG | + | chr2_3:35764421-35764440 | None:intergenic | 35.0% |
!! | GCTTTTAATTAGGCTGTGTT+TGG | - | chr2_3:35764867-35764886 | Msa0289520:intron | 35.0% |
TGAGCTTATTGAGACTGTTT+CGG | - | chr2_3:35764950-35764969 | Msa0289520:intron | 35.0% | |
!! | GCTGTTTTCATAAGCTATCT+TGG | + | chr2_3:35765048-35765067 | None:intergenic | 35.0% |
AAAAATAGTCAGGACCTGAT+TGG | + | chr2_3:35765186-35765205 | None:intergenic | 35.0% | |
!!! | GGTTTTGTTAGCATCCTTTT+TGG | - | chr2_3:35765507-35765526 | Msa0289520:intron | 35.0% |
TGTTCAATAGGAAGCCAAAA+AGG | + | chr2_3:35765524-35765543 | None:intergenic | 35.0% | |
!! | ATTTTTGTTTGTGTAAGGGC+TGG | - | chr2_3:35765584-35765603 | Msa0289520:intron | 35.0% |
! | TTCCAAATTTCTAGGAGCAA+GGG | + | chr2_3:35765628-35765647 | None:intergenic | 35.0% |
! | ATTCCAAATTTCTAGGAGCA+AGG | + | chr2_3:35765629-35765648 | None:intergenic | 35.0% |
! | CTCCTAGAAATTTGGAATGT+GGG | - | chr2_3:35765631-35765650 | Msa0289520:intron | 35.0% |
GCCTGTTTACTTTCTATGAT+TGG | + | chr2_3:35765696-35765715 | None:intergenic | 35.0% | |
GGCTGATAAAATTCGTATCA+TGG | - | chr2_3:35765713-35765732 | Msa0289520:intron | 35.0% | |
GTATCATGGGAACTATTTGT+TGG | - | chr2_3:35765727-35765746 | Msa0289520:intron | 35.0% | |
TTGTCTCAATGCATAGTCAT+TGG | - | chr2_3:35765750-35765769 | Msa0289520:intron | 35.0% | |
! | TTTAAAGCTTCTGGATACCA+AGG | + | chr2_3:35765794-35765813 | None:intergenic | 35.0% |
! | TACCCTATTCTCCTTTTCTT+TGG | - | chr2_3:35765929-35765948 | Msa0289520:CDS | 35.0% |
TGCCAAAGAAAAGGAGAATA+GGG | + | chr2_3:35765934-35765953 | None:intergenic | 35.0% | |
TCATTCTCTTTCTTATCCCA+AGG | - | chr2_3:35765999-35766018 | Msa0289520:intron | 35.0% | |
CATTCTCTTTCTTATCCCAA+GGG | - | chr2_3:35766000-35766019 | Msa0289520:intron | 35.0% | |
ATTCTCTTTCTTATCCCAAG+GGG | - | chr2_3:35766001-35766020 | Msa0289520:intron | 35.0% | |
GGTACGTAAATTGTGTTAGT+AGG | - | chr2_3:35766115-35766134 | Msa0289520:intron | 35.0% | |
TAGAAAACAATTGCCAACCT+AGG | + | chr2_3:35766386-35766405 | None:intergenic | 35.0% | |
CAAGTAAAACAACACACAAC+AGG | + | chr2_3:35766576-35766595 | None:intergenic | 35.0% | |
!! | ATTGAGTTGACTAGTTTGGT+AGG | - | chr2_3:35766602-35766621 | Msa0289520:intron | 35.0% |
GTTAACAGAGTATGCTTTCA+AGG | - | chr2_3:35766648-35766667 | Msa0289520:intron | 35.0% | |
! | AAACCAAGGTACTTAGTGAT+GGG | + | chr2_3:35766878-35766897 | None:intergenic | 35.0% |
! | TAAACCAAGGTACTTAGTGA+TGG | + | chr2_3:35766879-35766898 | None:intergenic | 35.0% |
CAGATCTGCAACAAAAATGA+TGG | + | chr2_3:35766941-35766960 | None:intergenic | 35.0% | |
AAGCCGTTTCAGATAATATC+AGG | + | chr2_3:35767097-35767116 | None:intergenic | 35.0% | |
!! | TCTGAAACGGCTTGTTAATT+AGG | - | chr2_3:35767104-35767123 | Msa0289520:intron | 35.0% |
!! | CTGAAACGGCTTGTTAATTA+GGG | - | chr2_3:35767105-35767124 | Msa0289520:intron | 35.0% |
!! | TGAAACGGCTTGTTAATTAG+GGG | - | chr2_3:35767106-35767125 | Msa0289520:intron | 35.0% |
TCATATATCTAGTTGGCCAT+AGG | + | chr2_3:35767310-35767329 | None:intergenic | 35.0% | |
!! | CTATGACTTGCTAATAGCAT+AGG | + | chr2_3:35767699-35767718 | None:intergenic | 35.0% |
CTATGCTATTAGCAAGTCAT+AGG | - | chr2_3:35767697-35767716 | Msa0289520:intron | 35.0% | |
!! | AATTTTATGTGGTGTCGAGT+AGG | - | chr2_3:35767815-35767834 | Msa0289520:intron | 35.0% |
!! | ATTTTATGTGGTGTCGAGTA+GGG | - | chr2_3:35767816-35767835 | Msa0289520:intron | 35.0% |
CATATTATTTAGGGGAATGC+TGG | + | chr2_3:35767913-35767932 | None:intergenic | 35.0% | |
! | ATTGCAATCTAAGAGCATAC+GGG | + | chr2_3:35768026-35768045 | None:intergenic | 35.0% |
ACATGTAGAGTCAAACAATG+TGG | + | chr2_3:35768105-35768124 | None:intergenic | 35.0% | |
! | GTGTATTCTTTTACACGAAC+AGG | - | chr2_3:35768167-35768186 | Msa0289520:intron | 35.0% |
!! | TTGGGAATTGATGACGAAAA+TGG | - | chr2_3:35768402-35768421 | Msa0289520:intron | 35.0% |
!! | TGGGAATTGATGACGAAAAT+GGG | - | chr2_3:35768403-35768422 | Msa0289520:intron | 35.0% |
GCAATAAGGAGAAACAAAGA+AGG | - | chr2_3:35768859-35768878 | Msa0289520:CDS | 35.0% | |
TTAACAGATGGTTAGGTACT+AGG | + | chr2_3:35769015-35769034 | None:intergenic | 35.0% | |
! | CATCACTACTGATTACAAAG+AGG | + | chr2_3:35769060-35769079 | None:intergenic | 35.0% |
AGTGATGAAAACAGATTGTG+TGG | - | chr2_3:35769073-35769092 | Msa0289520:CDS | 35.0% | |
CTGAGTGATTGTACAGTTTA+GGG | - | chr2_3:35769145-35769164 | Msa0289520:intron | 35.0% | |
TGAGTGATTGTACAGTTTAG+GGG | - | chr2_3:35769146-35769165 | Msa0289520:intron | 35.0% | |
!!! | GAAGACTCGTATTTTAACAG+GGG | + | chr2_3:35769325-35769344 | None:intergenic | 35.0% |
!!! | GTGAAGACTCGTATTTTAAC+AGG | + | chr2_3:35769327-35769346 | None:intergenic | 35.0% |
!! | GGAATTTGTTAGACAAGTCT+AGG | + | chr2_3:35769594-35769613 | None:intergenic | 35.0% |
CTTGTCTAACAAATTCCAAC+TGG | - | chr2_3:35769597-35769616 | Msa0289520:intron | 35.0% | |
GAAAAGTAATGTTTCAGCAG+AGG | + | chr2_3:35769862-35769881 | None:intergenic | 35.0% | |
TGGAATAACTTACTACTGCA+CGG | + | chr2_3:35770067-35770086 | None:intergenic | 35.0% | |
TAGAGTACGTGATAGAAAGA+GGG | + | chr2_3:35770094-35770113 | None:intergenic | 35.0% | |
TTAGAGTACGTGATAGAAAG+AGG | + | chr2_3:35770095-35770114 | None:intergenic | 35.0% | |
TAGCTCACAGCTTAATTAGT+AGG | - | chr2_3:35770159-35770178 | Msa0289520:intron | 35.0% | |
AGCTCACAGCTTAATTAGTA+GGG | - | chr2_3:35770160-35770179 | Msa0289520:intron | 35.0% | |
GCTTAATTGATCTTTCTACC+TGG | - | chr2_3:35770182-35770201 | Msa0289520:intron | 35.0% | |
GTCTCATCATAGGTAAATGA+AGG | + | chr2_3:35770452-35770471 | None:intergenic | 35.0% | |
!!! | CTTAGCTGGATTTTTTTGGT+AGG | - | chr2_3:35770549-35770568 | Msa0289520:intron | 35.0% |
CATTGTGTATGCTCAATAGA+TGG | + | chr2_3:35770659-35770678 | None:intergenic | 35.0% | |
! | TTGCTTATAATTTGGGATGG+AGG | - | chr2_3:35771045-35771064 | Msa0289520:intron | 35.0% |
! | TGCTTATAATTTGGGATGGA+GGG | - | chr2_3:35771046-35771065 | Msa0289520:intron | 35.0% |
ATTGAATGTATGTGCCATGT+CGG | - | chr2_3:35771125-35771144 | Msa0289520:intron | 35.0% | |
! | TGAAGATTGGCTCTTTGATA+AGG | - | chr2_3:35771151-35771170 | Msa0289520:intron | 35.0% |
TCTTTGATAAGGTGGTAGTT+TGG | - | chr2_3:35771162-35771181 | Msa0289520:intron | 35.0% | |
CTTTGATAAGGTGGTAGTTT+GGG | - | chr2_3:35771163-35771182 | Msa0289520:intron | 35.0% | |
TTTGATAAGGTGGTAGTTTG+GGG | - | chr2_3:35771164-35771183 | Msa0289520:intron | 35.0% | |
! | TAGTTTGGGGTAAGGAAATA+GGG | - | chr2_3:35771177-35771196 | Msa0289520:intron | 35.0% |
GATAGGAACTGGTTATAAAC+CGG | + | chr2_3:35771803-35771822 | None:intergenic | 35.0% | |
AAAACAAACTGGATAGGAAC+TGG | + | chr2_3:35771814-35771833 | None:intergenic | 35.0% | |
AGACACAAAACAAACTGGAT+AGG | + | chr2_3:35771820-35771839 | None:intergenic | 35.0% | |
! | TTGGTGACTATAATGGGAAA+CGG | + | chr2_3:35771915-35771934 | None:intergenic | 35.0% |
!! | CGATTGTTGGTGACTATAAT+GGG | + | chr2_3:35771921-35771940 | None:intergenic | 35.0% |
!! | TCGATTGTTGGTGACTATAA+TGG | + | chr2_3:35771922-35771941 | None:intergenic | 35.0% |
! | ATCTTGGATTTGATTGGTTC+TGG | + | chr2_3:35771949-35771968 | None:intergenic | 35.0% |
! | CAATGGATTTGAAGAGGATT+TGG | - | chr2_3:35772077-35772096 | Msa0289520:intron | 35.0% |
AAATTGTGCGATTTGTGATG+CGG | - | chr2_3:35772105-35772124 | Msa0289520:intron | 35.0% | |
! | TTTGCGTGATTTTGTGAAAC+TGG | - | chr2_3:35772151-35772170 | Msa0289520:intron | 35.0% |
TGCTAAACCAAATTTCACTG+AGG | - | chr2_3:35772174-35772193 | Msa0289520:intron | 35.0% | |
GCTAAACCAAATTTCACTGA+GGG | - | chr2_3:35772175-35772194 | Msa0289520:intron | 35.0% | |
GAATTGTTTGGTTGTTGATC+TGG | - | chr2_3:35772246-35772265 | Msa0289520:intron | 35.0% | |
TTTGGTTGTTGATCTGGTTA+GGG | - | chr2_3:35772252-35772271 | Msa0289520:intron | 35.0% | |
GAAAAACACACCAATACTAG+GGG | + | chr2_3:35772298-35772317 | None:intergenic | 35.0% | |
CGAAAAACACACCAATACTA+GGG | + | chr2_3:35772299-35772318 | None:intergenic | 35.0% | |
ACGAAAAACACACCAATACT+AGG | + | chr2_3:35772300-35772319 | None:intergenic | 35.0% | |
GTGGACAAAACTCTAAATTC+TGG | + | chr2_3:35772526-35772545 | None:intergenic | 35.0% | |
GCGCGATTGAGTTATTAATA+AGG | - | chr2_3:35772582-35772601 | Msa0289520:intron | 35.0% | |
TCTTCAACATCAGTGCTATA+AGG | + | chr2_3:35772674-35772693 | None:intergenic | 35.0% | |
GAAACATTGTACAACTTGTG+TGG | - | chr2_3:35772757-35772776 | Msa0289520:intron | 35.0% | |
!! | TTTGAGTTGAACAAAGAGTG+AGG | - | chr2_3:35772795-35772814 | Msa0289520:intron | 35.0% |
!! | TTGAGTTGAACAAAGAGTGA+GGG | - | chr2_3:35772796-35772815 | Msa0289520:intron | 35.0% |
GCTGCTTAATTCGATTAAAC+TGG | + | chr2_3:35772857-35772876 | None:intergenic | 35.0% | |
TGCAGCATCAAGAAATTATG+AGG | - | chr2_3:35772883-35772902 | Msa0289520:five_prime_UTR | 35.0% | |
AGCTGTGTCTTTGAACAAGT+TGG | - | chr2_3:35764439-35764458 | Msa0289520:three_prime_UTR | 40.0% | |
GAAAGTCATCATCATCATCC+AGG | - | chr2_3:35764470-35764489 | Msa0289520:three_prime_UTR | 40.0% | |
CCGATCAGAAAAAGAGAGAT+GGG | + | chr2_3:35764503-35764522 | None:intergenic | 40.0% | |
! | CCCATCTCTCTTTTTCTGAT+CGG | - | chr2_3:35764500-35764519 | Msa0289520:three_prime_UTR | 40.0% |
TCCGATCAGAAAAAGAGAGA+TGG | + | chr2_3:35764504-35764523 | None:intergenic | 40.0% | |
CTTATTTCCATAAGCTCTCC+AGG | + | chr2_3:35765279-35765298 | None:intergenic | 40.0% | |
! | AATTTCTAGGAGCAAGGGAA+CGG | + | chr2_3:35765623-35765642 | None:intergenic | 40.0% |
TTCCCTTGCTCCTAGAAATT+TGG | - | chr2_3:35765623-35765642 | Msa0289520:intron | 40.0% | |
! | GCTCCTAGAAATTTGGAATG+TGG | - | chr2_3:35765630-35765649 | Msa0289520:intron | 40.0% |
CTCCCACATTCCAAATTTCT+AGG | + | chr2_3:35765636-35765655 | None:intergenic | 40.0% | |
ACCATCAAAGTGACTTTCCT+TGG | - | chr2_3:35765774-35765793 | Msa0289520:intron | 40.0% | |
! | ACCAAGGAAAGTCACTTTGA+TGG | + | chr2_3:35765778-35765797 | None:intergenic | 40.0% |
CTGCCAAAGAAAAGGAGAAT+AGG | + | chr2_3:35765935-35765954 | None:intergenic | 40.0% | |
! | CTATTCTCCTTTTCTTTGGC+AGG | - | chr2_3:35765933-35765952 | Msa0289520:CDS | 40.0% |
TCAGATTCCTGCCAAAGAAA+AGG | + | chr2_3:35765943-35765962 | None:intergenic | 40.0% | |
ATAAACATGAGTCGAGGAAG+TGG | - | chr2_3:35766034-35766053 | Msa0289520:intron | 40.0% | |
! | ATTACTATTTTCTCCCCCGA+GGG | - | chr2_3:35766076-35766095 | Msa0289520:intron | 40.0% |
! | GGTTCAGATCTTTTACGTAC+TGG | - | chr2_3:35766174-35766193 | Msa0289520:intron | 40.0% |
!!! | AGGTCAACGGTCCTTTTTTT+GGG | + | chr2_3:35766366-35766385 | None:intergenic | 40.0% |
!!! | TAGGTCAACGGTCCTTTTTT+TGG | + | chr2_3:35766367-35766386 | None:intergenic | 40.0% |
AAAAAAAGGACCGTTGACCT+AGG | - | chr2_3:35766366-35766385 | Msa0289520:intron | 40.0% | |
!! | ACTTTCTGGTTTGCATTGCA+CGG | - | chr2_3:35766432-35766451 | Msa0289520:intron | 40.0% |
GTATGCTTTCAAGGCTGTTA+AGG | - | chr2_3:35766657-35766676 | Msa0289520:intron | 40.0% | |
TTGCGTCGTTACTCAGAAAA+AGG | - | chr2_3:35766723-35766742 | Msa0289520:intron | 40.0% | |
CGTTACTCAGAAAAAGGTTC+CGG | - | chr2_3:35766729-35766748 | Msa0289520:intron | 40.0% | |
TTTCCCATCACTAAGTACCT+TGG | - | chr2_3:35766872-35766891 | Msa0289520:CDS | 40.0% | |
CACTAAGTACCTTGGTTTAC+TGG | - | chr2_3:35766880-35766899 | Msa0289520:CDS | 40.0% | |
!! | GAAACGGCTTGTTAATTAGG+GGG | - | chr2_3:35767107-35767126 | Msa0289520:intron | 40.0% |
!! | TTGAGTTGCATGGGATTTTG+TGG | + | chr2_3:35767207-35767226 | None:intergenic | 40.0% |
!! | TACTTTGGGTTGAGTTGCAT+GGG | + | chr2_3:35767216-35767235 | None:intergenic | 40.0% |
!! | ATACTTTGGGTTGAGTTGCA+TGG | + | chr2_3:35767217-35767236 | None:intergenic | 40.0% |
GCTGAGTTTCGCCATAAATT+TGG | - | chr2_3:35767533-35767552 | Msa0289520:intron | 40.0% | |
ATTTGGATATGAGATGCCTG+TGG | - | chr2_3:35767550-35767569 | Msa0289520:intron | 40.0% | |
!! | TTTTATGTGGTGTCGAGTAG+GGG | - | chr2_3:35767817-35767836 | Msa0289520:intron | 40.0% |
! | TTGCAATCTAAGAGCATACG+GGG | + | chr2_3:35768025-35768044 | None:intergenic | 40.0% |
CATGCTTATATGAGACCACT+AGG | - | chr2_3:35768220-35768239 | Msa0289520:intron | 40.0% | |
TATATGAGACCACTAGGAGT+AGG | - | chr2_3:35768226-35768245 | Msa0289520:intron | 40.0% | |
ATTGTGCTGCAAAGTTGCTA+TGG | - | chr2_3:35768377-35768396 | Msa0289520:intron | 40.0% | |
TGCAAAGTTGCTATGGTCTT+GGG | - | chr2_3:35768384-35768403 | Msa0289520:intron | 40.0% | |
GGGTCACATTTGTAAAGTTG+AGG | + | chr2_3:35768429-35768448 | None:intergenic | 40.0% | |
ACTTTGGTCACAAGGTACAT+AGG | - | chr2_3:35768460-35768479 | Msa0289520:intron | 40.0% | |
GCTGAGTGATTGTACAGTTT+AGG | - | chr2_3:35769144-35769163 | Msa0289520:intron | 40.0% | |
! | TGTACAGTTTAGGGGTATGA+TGG | - | chr2_3:35769154-35769173 | Msa0289520:intron | 40.0% |
AACTGCTTGTGACAAGTTCA+AGG | + | chr2_3:35769233-35769252 | None:intergenic | 40.0% | |
GGTGTATGGTAGACAAAGAA+AGG | + | chr2_3:35769750-35769769 | None:intergenic | 40.0% | |
! | CTAGATTGATAGCTTCGCTA+GGG | + | chr2_3:35769771-35769790 | None:intergenic | 40.0% |
! | TCTAGATTGATAGCTTCGCT+AGG | + | chr2_3:35769772-35769791 | None:intergenic | 40.0% |
CACTATATATAGGTGCATCC+AGG | + | chr2_3:35770203-35770222 | None:intergenic | 40.0% | |
! | CCTTACTTTCAAAGCATTCG+AGG | + | chr2_3:35770244-35770263 | None:intergenic | 40.0% |
!! | CCTCGAATGCTTTGAAAGTA+AGG | - | chr2_3:35770241-35770260 | Msa0289520:intron | 40.0% |
CATCGTCACTTGATGTGATA+AGG | - | chr2_3:35770281-35770300 | Msa0289520:intron | 40.0% | |
TACCTATGATGAGACAGTTC+AGG | - | chr2_3:35770457-35770476 | Msa0289520:CDS | 40.0% | |
TACCTGAACTGTCTCATCAT+AGG | + | chr2_3:35770462-35770481 | None:intergenic | 40.0% | |
!!! | GACAGTCTTTTAGTCTTAGC+TGG | - | chr2_3:35770535-35770554 | Msa0289520:intron | 40.0% |
ACCATGTTATCAGTTGTCCT+TGG | - | chr2_3:35770582-35770601 | Msa0289520:CDS | 40.0% | |
TCCAAGGACAACTGATAACA+TGG | + | chr2_3:35770586-35770605 | None:intergenic | 40.0% | |
! | AGATTGGCTCTTTGATAAGG+TGG | - | chr2_3:35771154-35771173 | Msa0289520:intron | 40.0% |
! | GTAGTTTGGGGTAAGGAAAT+AGG | - | chr2_3:35771176-35771195 | Msa0289520:intron | 40.0% |
! | AGTTTGGGGTAAGGAAATAG+GGG | - | chr2_3:35771178-35771197 | Msa0289520:intron | 40.0% |
CTCTTGAAGAACTGATTGCA+AGG | + | chr2_3:35771369-35771388 | None:intergenic | 40.0% | |
CTTGCAATCAGTTCTTCAAG+AGG | - | chr2_3:35771367-35771386 | Msa0289520:intron | 40.0% | |
!!! | TTTTAAGGCCACTGAGATTG+AGG | - | chr2_3:35771391-35771410 | Msa0289520:intron | 40.0% |
ATGCAGGTAGAGAAACTACA+TGG | + | chr2_3:35771597-35771616 | None:intergenic | 40.0% | |
ATGTAGTTTCTCTACCTGCA+TGG | - | chr2_3:35771596-35771615 | Msa0289520:intron | 40.0% | |
TGTAGTTTCTCTACCTGCAT+GGG | - | chr2_3:35771597-35771616 | Msa0289520:intron | 40.0% | |
TGCACTGTCATCAACAATCA+TGG | + | chr2_3:35771638-35771657 | None:intergenic | 40.0% | |
ACACGAGACACAAAACAAAC+TGG | + | chr2_3:35771825-35771844 | None:intergenic | 40.0% | |
TCAGTCCCAAAAAACAAGCA+CGG | - | chr2_3:35771854-35771873 | Msa0289520:intron | 40.0% | |
!!! | TCGTTCCGTGCTTGTTTTTT+GGG | + | chr2_3:35771862-35771881 | None:intergenic | 40.0% |
!!! | ATCGTTCCGTGCTTGTTTTT+TGG | + | chr2_3:35771863-35771882 | None:intergenic | 40.0% |
GGAAACGGAAGTTTGATTGT+TGG | + | chr2_3:35771900-35771919 | None:intergenic | 40.0% | |
!! | GGTTCTGGAATTTCGATTGT+TGG | + | chr2_3:35771934-35771953 | None:intergenic | 40.0% |
! | AGGGTTCAATGGATTTGAAG+AGG | - | chr2_3:35772071-35772090 | Msa0289520:intron | 40.0% |
AACCAAATTTCACTGAGGGT+TGG | - | chr2_3:35772179-35772198 | Msa0289520:intron | 40.0% | |
AACCAACCCTCAGTGAAATT+TGG | + | chr2_3:35772184-35772203 | None:intergenic | 40.0% | |
!! | AATTTCACTGAGGGTTGGTT+TGG | - | chr2_3:35772184-35772203 | Msa0289520:intron | 40.0% |
GTTTGGTTGTTGATCTGGTT+AGG | - | chr2_3:35772251-35772270 | Msa0289520:intron | 40.0% | |
TTGGTTGTTGATCTGGTTAG+GGG | - | chr2_3:35772253-35772272 | Msa0289520:intron | 40.0% | |
!! | TTGCATTTTCTAGGTTGGAG+TGG | - | chr2_3:35772486-35772505 | Msa0289520:intron | 40.0% |
!! | ATTTAGAGTTTTGTCCACCG+AGG | - | chr2_3:35772528-35772547 | Msa0289520:intron | 40.0% |
ATATGCTCTCAACACAGGAT+AGG | + | chr2_3:35772826-35772845 | None:intergenic | 40.0% | |
GAATGATATGCTCTCAACAC+AGG | + | chr2_3:35772831-35772850 | None:intergenic | 40.0% | |
AGAGAGATGGGAAACAAACC+TGG | + | chr2_3:35764491-35764510 | None:intergenic | 45.0% | |
TGCAGCGGTTAAACTAGCTA+GGG | + | chr2_3:35764744-35764763 | None:intergenic | 45.0% | |
! | TAGCTAGTTTAACCGCTGCA+CGG | - | chr2_3:35764744-35764763 | Msa0289520:CDS | 45.0% |
AATCTAGCCTGGAGAGCTTA+TGG | - | chr2_3:35765269-35765288 | Msa0289520:intron | 45.0% | |
CAAAACCTCTCGACACAGTT+TGG | + | chr2_3:35765494-35765513 | None:intergenic | 45.0% | |
!!! | TTGTGTAAGGGCTGGCTTTT+TGG | - | chr2_3:35765592-35765611 | Msa0289520:intron | 45.0% |
!!! | TGTGTAAGGGCTGGCTTTTT+GGG | - | chr2_3:35765593-35765612 | Msa0289520:intron | 45.0% |
! | ATTTCTAGGAGCAAGGGAAC+GGG | + | chr2_3:35765622-35765641 | None:intergenic | 45.0% |
GGTAGCTGCTATTGCTGATA+AGG | + | chr2_3:35765675-35765694 | None:intergenic | 45.0% | |
! | CATTACTATTTTCTCCCCCG+AGG | - | chr2_3:35766075-35766094 | Msa0289520:intron | 45.0% |
! | TTACTATTTTCTCCCCCGAG+GGG | - | chr2_3:35766077-35766096 | Msa0289520:intron | 45.0% |
CAATTGCCAACCTAGGTCAA+CGG | + | chr2_3:35766379-35766398 | None:intergenic | 45.0% | |
ACCAATTGAGGTTATCCCTG+CGG | + | chr2_3:35766683-35766702 | None:intergenic | 45.0% | |
! | ATAACCTCAATTGGTGTCCG+AGG | - | chr2_3:35766688-35766707 | Msa0289520:intron | 45.0% |
CGCAAACAGAATCGTTTCCT+CGG | + | chr2_3:35766708-35766727 | None:intergenic | 45.0% | |
AAAAAGGTTCCGGTGAGTAC+AGG | - | chr2_3:35766739-35766758 | Msa0289520:intron | 45.0% | |
AGTCAACTTCCTGTACTCAC+CGG | + | chr2_3:35766751-35766770 | None:intergenic | 45.0% | |
TTCATTGCAGGACAAGCTCT+TGG | - | chr2_3:35766826-35766845 | Msa0289520:intron | 45.0% | |
TACCTTGGTTTACTGGCAAC+TGG | - | chr2_3:35766887-35766906 | Msa0289520:CDS | 45.0% | |
ATAGTTGTGCATGCTGCCTA+TGG | - | chr2_3:35767291-35767310 | Msa0289520:intron | 45.0% | |
CCTAGCATCAGCTGAAAAGA+AGG | + | chr2_3:35767483-35767502 | None:intergenic | 45.0% | |
! | CCTTCTTTTCAGCTGATGCT+AGG | - | chr2_3:35767480-35767499 | Msa0289520:intron | 45.0% |
CATTTAGCCAACACATCCAC+AGG | + | chr2_3:35767569-35767588 | None:intergenic | 45.0% | |
!! | CTGTGGATGTGTTGGCTAAA+TGG | - | chr2_3:35767567-35767586 | Msa0289520:intron | 45.0% |
!! | TAGGGGAATGCTGGTTTCAA+GGG | + | chr2_3:35767904-35767923 | None:intergenic | 45.0% |
!! | TTAGGGGAATGCTGGTTTCA+AGG | + | chr2_3:35767905-35767924 | None:intergenic | 45.0% |
CATTCATGGAGCTCGATTGT+AGG | + | chr2_3:35767954-35767973 | None:intergenic | 45.0% | |
AGCTCCATGAATGTGCTTCT+TGG | - | chr2_3:35767961-35767980 | Msa0289520:intron | 45.0% | |
! | GTAGCCAAGAAGCACATTCA+TGG | + | chr2_3:35767968-35767987 | None:intergenic | 45.0% |
AACAATGTGGCTGCTGACAA+AGG | + | chr2_3:35768092-35768111 | None:intergenic | 45.0% | |
CGTCAGAGATTGCAGTGAAA+AGG | + | chr2_3:35768266-35768285 | None:intergenic | 45.0% | |
CTGCAAAGTTGCTATGGTCT+TGG | - | chr2_3:35768383-35768402 | Msa0289520:intron | 45.0% | |
CTTTACAAATGTGACCCTGC+CGG | - | chr2_3:35768432-35768451 | Msa0289520:intron | 45.0% | |
TTTACAAATGTGACCCTGCC+GGG | - | chr2_3:35768433-35768452 | Msa0289520:intron | 45.0% | |
CTTGTGACCAAAGTAATGCC+CGG | + | chr2_3:35768454-35768473 | None:intergenic | 45.0% | |
GCTTCAGTCATTCACATCGA+TGG | + | chr2_3:35768656-35768675 | None:intergenic | 45.0% | |
! | ACAGTTTAGGGGTATGATGG+AGG | - | chr2_3:35769157-35769176 | Msa0289520:intron | 45.0% |
GAAAGAGAGGGGAATCTTAG+AGG | + | chr2_3:35769623-35769642 | None:intergenic | 45.0% | |
! | GTATCTAGCTTCTGCTGATG+TGG | + | chr2_3:35769700-35769719 | None:intergenic | 45.0% |
CATCAGCAGAAGCTAGATAC+TGG | - | chr2_3:35769700-35769719 | Msa0289520:intron | 45.0% | |
GGTAGACAAAGAAAGGAGAG+CGG | + | chr2_3:35769743-35769762 | None:intergenic | 45.0% | |
!! | CGTGATAGAAAGAGGGTGTT+TGG | + | chr2_3:35770087-35770106 | None:intergenic | 45.0% |
! | TAAGGTGGTAGTTTGGGGTA+AGG | - | chr2_3:35771169-35771188 | Msa0289520:intron | 45.0% |
AAATAGGGGTTGGAGTGATG+AGG | - | chr2_3:35771192-35771211 | Msa0289520:intron | 45.0% | |
!! | TCTACCTGCATGGGTTTTGA+GGG | - | chr2_3:35771606-35771625 | Msa0289520:intron | 45.0% |
TAACTAATGCAGGTAGGGGT+CGG | - | chr2_3:35771678-35771697 | Msa0289520:intron | 45.0% | |
!! | ATGGGCTGGGCTCTAAAAAA+TGG | - | chr2_3:35772224-35772243 | Msa0289520:intron | 45.0% |
! | CTAGGGGTGTGCAAAAGATT+TGG | + | chr2_3:35772282-35772301 | None:intergenic | 45.0% |
! | CTTTTGCACACCCCTAGTAT+TGG | - | chr2_3:35772285-35772304 | Msa0289520:intron | 45.0% |
!! | CAGAAGCATGATTGATTCGC+AGG | + | chr2_3:35772725-35772744 | None:intergenic | 45.0% |
AGTTGAACAAAGAGTGAGGG+CGG | - | chr2_3:35772799-35772818 | Msa0289520:intron | 45.0% | |
CTGATCGGAATTCCCCGATA+CGG | - | chr2_3:35764515-35764534 | Msa0289520:three_prime_UTR | 50.0% | |
GTGCAGCGGTTAAACTAGCT+AGG | + | chr2_3:35764745-35764764 | None:intergenic | 50.0% | |
! | AGCTAGTTTAACCGCTGCAC+GGG | - | chr2_3:35764745-35764764 | Msa0289520:CDS | 50.0% |
CCTTTCTATTTCCCGTGCAG+CGG | + | chr2_3:35764759-35764778 | None:intergenic | 50.0% | |
AACATGAGTCGAGGAAGTGG+AGG | - | chr2_3:35766037-35766056 | Msa0289520:intron | 50.0% | |
AAAGGACCGTTGACCTAGGT+TGG | - | chr2_3:35766370-35766389 | Msa0289520:intron | 50.0% | |
GGTTTGCATTGCACGGAAGT+TGG | - | chr2_3:35766439-35766458 | Msa0289520:intron | 50.0% | |
GTTTCCTCGGACACCAATTG+AGG | + | chr2_3:35766695-35766714 | None:intergenic | 50.0% | |
TGCCAGTTGCCAGTAAACCA+AGG | + | chr2_3:35766892-35766911 | None:intergenic | 50.0% | |
TTACTGGCAACTGGCATGAC+AGG | - | chr2_3:35766896-35766915 | Msa0289520:CDS | 50.0% | |
TTCAGCTGATGCTAGGACAC+TGG | - | chr2_3:35767487-35767506 | Msa0289520:intron | 50.0% | |
TGAGATGCCTGTGGATGTGT+TGG | - | chr2_3:35767559-35767578 | Msa0289520:intron | 50.0% | |
ATAGGCTAACAACGGCTGTC+TGG | + | chr2_3:35767655-35767674 | None:intergenic | 50.0% | |
CGGGCATTACTTTGGTCACA+AGG | - | chr2_3:35768452-35768471 | Msa0289520:intron | 50.0% | |
TGCCTAGGCACATCTCTCAA+AGG | + | chr2_3:35769567-35769586 | None:intergenic | 50.0% | |
ACAAGTCTAGGGAGATGCCT+AGG | + | chr2_3:35769582-35769601 | None:intergenic | 50.0% | |
GATAGCTTCGCTAGGGTGTA+TGG | + | chr2_3:35769764-35769783 | None:intergenic | 50.0% | |
ATCCTTCGATCCAGCACTTG+TGG | + | chr2_3:35770387-35770406 | None:intergenic | 50.0% | |
TGCTGGATCGAAGGATCAAG+AGG | - | chr2_3:35770391-35770410 | Msa0289520:intron | 50.0% | |
! | GCCATGTCGGTACTGAAGAT+TGG | - | chr2_3:35771138-35771157 | Msa0289520:intron | 50.0% |
!! | GCCAATCTTCAGTACCGACA+TGG | + | chr2_3:35771142-35771161 | None:intergenic | 50.0% |
TGGGGTAAGGAAATAGGGGT+TGG | - | chr2_3:35771182-35771201 | Msa0289520:intron | 50.0% | |
! | CTCTACCTGCATGGGTTTTG+AGG | - | chr2_3:35771605-35771624 | Msa0289520:intron | 50.0% |
!! | CACTGAGGGTTGGTTTGGTT+TGG | - | chr2_3:35772189-35772208 | Msa0289520:intron | 50.0% |
! | CTAGGTTGGAGTGGTGCAAA+AGG | - | chr2_3:35772495-35772514 | Msa0289520:intron | 50.0% |
!! | CAAGTGCTCGTCGATTTCCT+CGG | + | chr2_3:35772548-35772567 | None:intergenic | 50.0% |
ATCGGAATTCCCCGATACGG+CGG | - | chr2_3:35764518-35764537 | Msa0289520:three_prime_UTR | 55.0% | |
! | TCAATCGCGCCGCTTTGTAG+GGG | + | chr2_3:35764583-35764602 | None:intergenic | 55.0% |
! | GTCAATCGCGCCGCTTTGTA+GGG | + | chr2_3:35764584-35764603 | None:intergenic | 55.0% |
! | TGTCAATCGCGCCGCTTTGT+AGG | + | chr2_3:35764585-35764604 | None:intergenic | 55.0% |
CCGCTGCACGGGAAATAGAA+AGG | - | chr2_3:35764756-35764775 | Msa0289520:CDS | 55.0% | |
CACAGCCAAACTGTGTCGAG+AGG | - | chr2_3:35765486-35765505 | Msa0289520:intron | 55.0% | |
ATGAGTCGAGGAAGTGGAGG+TGG | - | chr2_3:35766040-35766059 | Msa0289520:intron | 55.0% | |
ACTTGAAAGAGACGCCCCTC+GGG | + | chr2_3:35766094-35766113 | None:intergenic | 55.0% | |
CACTTGAAAGAGACGCCCCT+CGG | + | chr2_3:35766095-35766114 | None:intergenic | 55.0% | |
!! | GAGGGGCGTCTCTTTCAAGT+GGG | - | chr2_3:35766094-35766113 | Msa0289520:intron | 55.0% |
TTCAAGGCTGTTAAGGCCGC+AGG | - | chr2_3:35766664-35766683 | Msa0289520:intron | 55.0% | |
TCAAGGCTGTTAAGGCCGCA+GGG | - | chr2_3:35766665-35766684 | Msa0289520:intron | 55.0% | |
GCCGCAGGGATAACCTCAAT+TGG | - | chr2_3:35766679-35766698 | Msa0289520:intron | 55.0% | |
GCTAACAACGGCTGTCTGGA+AGG | + | chr2_3:35767651-35767670 | None:intergenic | 55.0% | |
GACCAAAGTAATGCCCGGCA+GGG | + | chr2_3:35768449-35768468 | None:intergenic | 55.0% | |
TGACCAAAGTAATGCCCGGC+AGG | + | chr2_3:35768450-35768469 | None:intergenic | 55.0% | |
! | GGCCTTTGAGAGATGTGCCT+AGG | - | chr2_3:35769562-35769581 | Msa0289520:intron | 55.0% |
GGGGAATCTTAGAGGCCAGT+TGG | + | chr2_3:35769615-35769634 | None:intergenic | 55.0% | |
CTAGCTTCTGCTGATGTGGC+AGG | + | chr2_3:35769696-35769715 | None:intergenic | 55.0% | |
TGTACTCAGGCCACAAGTGC+TGG | - | chr2_3:35770374-35770393 | Msa0289520:intron | 55.0% | |
TAGGGGTTGGAGTGATGAGG+AGG | - | chr2_3:35771195-35771214 | Msa0289520:intron | 55.0% | |
!!! | ACCTGCATGGGTTTTGAGGG+AGG | - | chr2_3:35771609-35771628 | Msa0289520:intron | 55.0% |
!!! | CCTGCATGGGTTTTGAGGGA+GGG | - | chr2_3:35771610-35771629 | Msa0289520:intron | 55.0% |
AACTCAATCGCGCTCGCTGA+TGG | + | chr2_3:35772575-35772594 | None:intergenic | 55.0% | |
! | CGAGGGTGCAATTCCATCGC+TGG | - | chr2_3:35764545-35764564 | Msa0289520:three_prime_UTR | 60.0% |
CCGCTTTGTAGGGGCGGATA+CGG | + | chr2_3:35764574-35764593 | None:intergenic | 60.0% | |
CCGTATCCGCCCCTACAAAG+CGG | - | chr2_3:35764571-35764590 | Msa0289520:three_prime_UTR | 60.0% | |
TTGAAAGAGACGCCCCTCGG+GGG | + | chr2_3:35766092-35766111 | None:intergenic | 60.0% | |
CTTGAAAGAGACGCCCCTCG+GGG | + | chr2_3:35766093-35766112 | None:intergenic | 60.0% | |
!! | CGAGGGGCGTCTCTTTCAAG+TGG | - | chr2_3:35766093-35766112 | Msa0289520:intron | 60.0% |
GACCCTGCCGGGCATTACTT+TGG | - | chr2_3:35768444-35768463 | Msa0289520:intron | 60.0% | |
! | TGTGGCAGGAGGTGTGTGGT+AGG | + | chr2_3:35769682-35769701 | None:intergenic | 60.0% |
! | CTGATGTGGCAGGAGGTGTG+TGG | + | chr2_3:35769686-35769705 | None:intergenic | 60.0% |
GCTTCTGCTGATGTGGCAGG+AGG | + | chr2_3:35769693-35769712 | None:intergenic | 60.0% | |
!! | GGCCACAAGTGCTGGATCGA+AGG | - | chr2_3:35770382-35770401 | Msa0289520:intron | 60.0% |
CCCTCCCTCAAAACCCATGC+AGG | + | chr2_3:35771613-35771632 | None:intergenic | 60.0% | |
AATGCAGGTAGGGGTCGGCA+TGG | - | chr2_3:35771683-35771702 | Msa0289520:intron | 60.0% | |
AGGTAGGGGTCGGCATGGTT+TGG | - | chr2_3:35771688-35771707 | Msa0289520:intron | 60.0% | |
!! | GTGCTCGTCGATTTCCTCGG+TGG | + | chr2_3:35772545-35772564 | None:intergenic | 60.0% |
! | ATCGCGCCGCTTTGTAGGGG+CGG | + | chr2_3:35764580-35764599 | None:intergenic | 65.0% |
GCGGATACGGCAGCCAGCGA+TGG | + | chr2_3:35764561-35764580 | None:intergenic | 70.0% | |
ACCCTCGCGCGCCGCCGTAT+CGG | + | chr2_3:35764532-35764551 | None:intergenic | 75.0% | |
! | CCTCGCGCGCCGCCGTATCG+GGG | + | chr2_3:35764530-35764549 | None:intergenic | 80.0% |
! | CCCTCGCGCGCCGCCGTATC+GGG | + | chr2_3:35764531-35764550 | None:intergenic | 80.0% |
! | CCCGATACGGCGGCGCGCGA+GGG | - | chr2_3:35764528-35764547 | Msa0289520:three_prime_UTR | 80.0% |
! | CCCCGATACGGCGGCGCGCG+AGG | - | chr2_3:35764527-35764546 | Msa0289520:three_prime_UTR | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 35764382 | 35772931 | 35764382 | ID=Msa0289520;Name=Msa0289520 |
chr2_3 | mRNA | 35764382 | 35772931 | 35764382 | ID=Msa0289520-mRNA-1;Parent=Msa0289520;Name=Msa0289520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=195|0.8|0.90|0.90|0.9|0.81|11|340|283 |
chr2_3 | exon | 35764382 | 35764814 | 35764382 | ID=Msa0289520-mRNA-1:exon:11684;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35765275 | 35765385 | 35765275 | ID=Msa0289520-mRNA-1:exon:11683;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35765901 | 35765960 | 35765901 | ID=Msa0289520-mRNA-1:exon:11682;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35766835 | 35766930 | 35766835 | ID=Msa0289520-mRNA-1:exon:11681;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35768840 | 35768922 | 35768840 | ID=Msa0289520-mRNA-1:exon:11680;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35769066 | 35769124 | 35769066 | ID=Msa0289520-mRNA-1:exon:11679;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35769725 | 35769821 | 35769725 | ID=Msa0289520-mRNA-1:exon:11678;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35770396 | 35770477 | 35770396 | ID=Msa0289520-mRNA-1:exon:11677;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35770563 | 35770657 | 35770563 | ID=Msa0289520-mRNA-1:exon:11676;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35771198 | 35771358 | 35771198 | ID=Msa0289520-mRNA-1:exon:11675;Parent=Msa0289520-mRNA-1 |
chr2_3 | exon | 35772822 | 35772931 | 35772822 | ID=Msa0289520-mRNA-1:exon:11674;Parent=Msa0289520-mRNA-1 |
chr2_3 | five_prime_UTR | 35772822 | 35772931 | 35772822 | ID=Msa0289520-mRNA-1:five_prime_utr;Parent=Msa0289520-mRNA-1 |
chr2_3 | five_prime_UTR | 35771274 | 35771358 | 35771274 | ID=Msa0289520-mRNA-1:five_prime_utr;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35771198 | 35771273 | 35771198 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35770563 | 35770657 | 35770563 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35770396 | 35770477 | 35770396 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35769725 | 35769821 | 35769725 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35769066 | 35769124 | 35769066 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35768840 | 35768922 | 35768840 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35766835 | 35766930 | 35766835 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35765901 | 35765960 | 35765901 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35765275 | 35765385 | 35765275 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | CDS | 35764722 | 35764814 | 35764722 | ID=Msa0289520-mRNA-1:cds;Parent=Msa0289520-mRNA-1 |
chr2_3 | three_prime_UTR | 35764382 | 35764721 | 35764382 | ID=Msa0289520-mRNA-1:three_prime_utr;Parent=Msa0289520-mRNA-1 |
Gene Sequence |
Protein sequence |