AlfalfaGEDB | Msa0291150

M. sativa cultivar zhongmu-4 / Msa0291150

KEGG: K00430
GO: GO:0000902 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016684 GO:0030312 GO:0031090 GO:0031347 GO:0031349 GO:0032502 GO:0032989 GO:0035821 GO:0040007 GO:0040008 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045926 GO:0048046 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0055114 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0071944 GO:0072593 GO:0075136 GO:0080134 GO:0097237 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291150	CAA62226.1	99.155	355	3	0	1	355	1	355	0.0	724

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291150	sp\|Q9LEH3\|PER15_IPOBA	63.696	303	109	1	25	326	21	323	2.57e-136	394

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291150	Q43790	99.155	355	3	0	1	355	1	355	0.0	724

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0234170	Msa0291150	0.913821	3.941659e-84	-8.615850e-47
Msa0291150	Msa0373550	0.801836	7.460912e-49	-8.615850e-47
Msa0291150	Msa0468660	0.802116	6.536304e-49	-8.615850e-47
Msa0291150	Msa0474570	0.809561	1.780608e-50	-8.615850e-47
Msa0291150	Msa0805390	0.805704	1.173998e-49	-8.615850e-47
Msa0291150	Msa0981670	0.918805	9.897650e-87	-8.615850e-47
Msa0291150	Msa1213040	0.802652	5.069247e-49	-8.615850e-47
Msa0291150	Msa1304790	0.802578	5.249772e-49	-8.615850e-47
Msa0291150	Msa1406090	0.806272	8.913905e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291150	MtrunA17_Chr2g0292241	97.183	355	10	0	1	355	1	355	0.0	714
Msa0291150	MtrunA17_Chr2g0292211	88.451	355	38	1	1	355	12	363	0.0	646
Msa0291150	MtrunA17_Chr2g0292181	83.380	355	57	1	1	355	10	362	0.0	614
Msa0291150	MtrunA17_Chr2g0292251	82.282	333	58	1	22	353	21	353	0.0	567
Msa0291150	MtrunA17_Chr2g0291751	71.268	355	102	0	1	355	1	355	0.0	530
Msa0291150	MtrunA17_Chr2g0292261	73.239	355	90	3	1	354	1	351	0.0	529
Msa0291150	MtrunA17_Chr2g0292111	71.549	355	101	0	1	355	1	355	0.0	525
Msa0291150	MtrunA17_Chr2g0292151	69.859	355	106	1	1	355	1	354	0.0	514
Msa0291150	MtrunA17_Chr2g0292271	71.989	357	94	5	1	355	1	353	0.0	513
Msa0291150	MtrunA17_Chr2g0292291	67.797	354	109	2	3	355	4	353	6.28e-178	497
Msa0291150	MtrunA17_Chr2g0292091	63.380	355	119	2	1	355	1	344	5.26e-164	462
Msa0291150	MtrunA17_Chr2g0292101	64.045	356	116	3	1	355	1	345	9.89e-163	458
Msa0291150	MtrunA17_Chr1g0175561	59.164	311	126	1	21	330	16	326	3.80e-133	383
Msa0291150	MtrunA17_Chr7g0258811	60.261	307	121	1	25	330	65	371	4.15e-133	384
Msa0291150	MtrunA17_Chr5g0404721	53.135	303	141	1	29	331	30	331	1.54e-110	325
Msa0291150	MtrunA17_Chr8g0372601	50.825	303	148	1	29	331	30	331	2.21e-108	320
Msa0291150	MtrunA17_Chr4g0070951	51.757	313	147	2	21	331	20	330	2.57e-106	315
Msa0291150	MtrunA17_Chr2g0299691	49.837	307	149	2	28	331	55	359	7.51e-104	309
Msa0291150	MtrunA17_Chr5g0402581	50.820	305	146	3	27	330	25	326	1.90e-103	307
Msa0291150	MtrunA17_Chr5g0402571	49.346	306	149	4	27	330	25	326	1.20e-100	300
Msa0291150	MtrunA17_Chr1g0155611	49.338	302	153	0	29	330	46	347	1.32e-99	298
Msa0291150	MtrunA17_Chr2g0320071	45.846	325	167	2	6	330	2	317	2.21e-96	289
Msa0291150	MtrunA17_Chr3g0129051	47.222	324	156	4	5	326	8	318	6.75e-96	288
Msa0291150	MtrunA17_Chr4g0013201	48.065	310	152	2	21	330	38	338	5.27e-95	286
Msa0291150	MtrunA17_Chr2g0292281	61.373	233	76	3	122	354	18	236	2.44e-94	281
Msa0291150	MtrunA17_Chr3g0129061	47.256	328	158	4	1	326	4	318	2.49e-94	284
Msa0291150	MtrunA17_Chr4g0024121	45.201	323	169	4	9	330	11	326	3.33e-94	283
Msa0291150	MtrunA17_Chr2g0320031	48.852	305	148	2	26	330	23	319	5.44e-94	283
Msa0291150	MtrunA17_Chr7g0244461	44.753	324	162	3	7	330	6	312	1.08e-93	282
Msa0291150	MtrunA17_Chr4g0013171	47.950	317	154	4	16	330	14	321	1.28e-93	282
Msa0291150	MtrunA17_Chr3g0106921	46.462	325	158	5	9	330	9	320	2.71e-93	281
Msa0291150	MtrunA17_Chr5g0432441	47.112	329	159	5	7	330	8	326	4.09e-93	281
Msa0291150	MtrunA17_Chr2g0322861	46.226	318	165	5	15	330	73	386	5.77e-93	283
Msa0291150	MtrunA17_Chr3g0114451	47.855	303	149	2	28	330	25	318	1.58e-92	279
Msa0291150	MtrunA17_Chr2g0320091	47.756	312	151	5	21	330	17	318	2.93e-92	278
Msa0291150	MtrunA17_Chr2g0320061	46.452	310	158	2	21	330	17	318	2.93e-92	278
Msa0291150	MtrunA17_Chr5g0438021	45.062	324	166	4	9	330	12	325	4.13e-92	278
Msa0291150	MtrunA17_Chr4g0043391	47.335	319	158	3	15	330	13	324	8.19e-92	277
Msa0291150	MtrunA17_Chr4g0038171	46.708	319	160	3	15	330	10	321	1.56e-91	276
Msa0291150	MtrunA17_Chr4g0013191	49.351	308	144	5	26	330	42	340	2.10e-91	277
Msa0291150	MtrunA17_Chr3g0129041	46.988	332	161	4	1	330	4	322	2.27e-91	276
Msa0291150	MtrunA17_Chr2g0320101	45.806	310	159	2	21	330	17	317	4.06e-91	275
Msa0291150	MtrunA17_Chr2g0320051	46.580	307	156	2	24	330	20	318	1.03e-90	275
Msa0291150	MtrunA17_Chr4g0038161	46.082	319	158	4	15	330	13	320	7.92e-90	272
Msa0291150	MtrunA17_Chr4g0038151	45.768	319	160	4	15	330	13	321	8.45e-90	272
Msa0291150	MtrunA17_Chr4g0013181	47.841	301	146	4	32	330	62	353	1.39e-89	273
Msa0291150	MtrunA17_Chr4g0068621	42.857	336	176	4	7	330	5	336	1.02e-88	270
Msa0291150	MtrunA17_Chr7g0244451	46.349	315	160	2	16	330	11	316	5.23e-88	267
Msa0291150	MtrunA17_Chr5g0400331	46.865	303	157	2	32	330	29	331	5.26e-88	268
Msa0291150	MtrunA17_Chr7g0268501	44.304	316	170	4	15	330	11	320	2.18e-87	266
Msa0291150	MtrunA17_Chr7g0268521	44.304	316	170	4	15	330	11	320	2.18e-87	266
Msa0291150	MtrunA17_Chr4g0063671	43.925	321	166	6	16	330	8	320	2.71e-87	266
Msa0291150	MtrunA17_Chr5g0432341	44.615	325	169	4	9	330	5	321	3.08e-87	266
Msa0291150	MtrunA17_Chr5g0432351	46.254	307	154	4	27	330	23	321	4.31e-87	265
Msa0291150	MtrunA17_Chr3g0106901	45.397	315	163	2	16	330	18	323	8.91e-87	265
Msa0291150	MtrunA17_Chr1g0213061	42.679	321	173	4	13	331	11	322	1.04e-86	265
Msa0291150	MtrunA17_Chr4g0013821	42.308	312	175	3	25	336	24	330	1.39e-85	262
Msa0291150	MtrunA17_Chr3g0128061	42.947	319	179	2	14	331	11	327	4.11e-85	260
Msa0291150	MtrunA17_Chr5g0432331	44.615	325	169	4	9	330	36	352	4.48e-85	261
Msa0291150	MtrunA17_Chr2g0279041	45.033	302	155	5	33	330	31	325	3.16e-84	258
Msa0291150	MtrunA17_Chr4g0013721	43.087	311	172	3	24	334	95	400	7.53e-84	260
Msa0291150	MtrunA17_Chr4g0076211	45.302	298	152	6	34	330	46	333	5.98e-83	255
Msa0291150	MtrunA17_Chr3g0107881	45.631	309	158	3	25	330	23	324	4.81e-82	253
Msa0291150	MtrunA17_Chr6g0467121	47.541	305	142	8	29	330	74	363	2.01e-81	253
Msa0291150	MtrunA17_Chr7g0254201	42.157	306	168	5	27	332	18	314	2.82e-81	250
Msa0291150	MtrunA17_Chr5g0401431	41.742	333	185	5	1	329	1	328	2.25e-80	248
Msa0291150	MtrunA17_Chr5g0421411	45.230	283	144	6	56	331	8	286	4.76e-80	246
Msa0291150	MtrunA17_Chr6g0467161	43.902	328	160	7	16	332	24	338	5.48e-80	248
Msa0291150	MtrunA17_Chr1g0148021	45.277	307	160	5	28	330	26	328	1.05e-78	244
Msa0291150	MtrunA17_Chr4g0046131	43.607	305	165	5	28	327	41	343	2.84e-78	243
Msa0291150	MtrunA17_Chr6g0467251	43.730	311	162	6	29	337	36	335	3.28e-78	243
Msa0291150	MtrunA17_Chr5g0405991	40.184	326	183	8	6	330	2	316	1.51e-77	241
Msa0291150	MtrunA17_Chr1g0204011	42.484	306	170	4	25	330	23	322	1.76e-77	241
Msa0291150	MtrunA17_Chr7g0224371	39.117	317	183	3	15	331	17	323	2.59e-77	240
Msa0291150	MtrunA17_Chr2g0296621	43.522	301	158	6	32	331	53	342	2.88e-77	241
Msa0291150	MtrunA17_Chr1g0194271	40.597	335	186	4	7	330	8	340	3.59e-77	241
Msa0291150	MtrunA17_Chr1g0194151	40.000	330	188	4	7	330	8	333	7.00e-77	239
Msa0291150	MtrunA17_Chr4g0072091	45.215	303	156	5	28	326	23	319	2.85e-76	238
Msa0291150	MtrunA17_Chr1g0164891	42.715	302	167	4	33	330	93	392	1.28e-75	238
Msa0291150	MtrunA17_Chr8g0371381	40.717	307	174	5	24	330	21	319	2.44e-75	235
Msa0291150	MtrunA17_Chr4g0053871	43.252	326	164	7	6	326	11	320	5.81e-75	234
Msa0291150	MtrunA17_Chr4g0075241	40.000	320	182	5	16	330	13	327	1.41e-74	233
Msa0291150	MtrunA17_Chr6g0460711	39.815	324	178	8	11	330	4	314	9.68e-73	228
Msa0291150	MtrunA17_Chr7g0225221	40.964	332	182	6	1	330	1	320	3.60e-72	227
Msa0291150	MtrunA17_Chr1g0197411	40.549	328	185	6	9	330	7	330	1.01e-71	226
Msa0291150	MtrunA17_Chr1g0188431	38.922	334	187	7	1	330	7	327	1.11e-71	226
Msa0291150	MtrunA17_Chr1g0157051	39.198	324	189	5	6	329	2	317	1.89e-71	225
Msa0291150	MtrunA17_Chr2g0329641	38.907	311	172	6	28	330	35	335	3.47e-69	220
Msa0291150	MtrunA17_Chr6g0477071	37.003	327	187	6	4	330	35	342	3.59e-69	220
Msa0291150	MtrunA17_Chr2g0278671	40.514	311	173	6	25	330	20	323	4.44e-69	219
Msa0291150	MtrunA17_Chr7g0254231	40.196	306	165	7	29	331	22	312	1.36e-68	218
Msa0291150	MtrunA17_Chr2g0279061	45.038	262	133	5	73	330	12	266	3.95e-67	212
Msa0291150	MtrunA17_Chr5g0432401	38.253	332	155	4	1	329	1	285	9.45e-65	207
Msa0291150	MtrunA17_Chr8g0364291	37.580	314	188	4	25	334	19	328	1.01e-64	208
Msa0291150	MtrunA17_Chr5g0413051	38.462	312	179	7	27	330	71	377	1.00e-63	207
Msa0291150	MtrunA17_Chr2g0316481	35.613	351	185	8	14	326	55	402	1.95e-62	204
Msa0291150	MtrunA17_Chr3g0136751	39.355	310	178	4	24	330	20	322	2.17e-62	202
Msa0291150	MtrunA17_Chr2g0316791	35.511	352	186	8	14	327	55	403	2.58e-62	204
Msa0291150	MtrunA17_Chr6g0451571	39.228	311	178	7	25	330	30	334	4.05e-62	201
Msa0291150	MtrunA17_Chr1g0181511	38.511	309	177	5	27	331	25	324	3.19e-61	199
Msa0291150	MtrunA17_Chr2g0316831	35.328	351	186	8	14	326	91	438	3.53e-61	202
Msa0291150	MtrunA17_Chr2g0316191	34.844	353	188	8	14	327	55	404	1.65e-60	199
Msa0291150	MtrunA17_Chr2g0311251	36.202	337	179	7	27	331	9	341	2.48e-59	194
Msa0291150	MtrunA17_Chr1g0181431	37.338	308	182	4	27	331	25	324	8.46e-59	192
Msa0291150	MtrunA17_Chr4g0074851	37.013	308	181	5	32	335	35	333	1.19e-58	192
Msa0291150	MtrunA17_Chr1g0181481	37.987	308	180	4	27	331	25	324	1.43e-58	192
Msa0291150	MtrunA17_Chr2g0311241	32.108	408	186	10	3	331	36	431	1.47e-55	187
Msa0291150	MtrunA17_Chr4g0004591	31.790	324	159	4	26	329	74	355	7.03e-48	165
Msa0291150	MtrunA17_Chr3g0114461	45.789	190	95	2	141	330	11	192	2.08e-47	159
Msa0291150	MtrunA17_Chr2g0316811	35.223	247	136	4	14	237	29	274	2.21e-42	150
Msa0291150	MtrunA17_Chr3g0114491	55.238	105	47	0	28	132	17	121	1.50e-34	124
Msa0291150	MtrunA17_Chr2g0316141	33.333	291	139	10	75	331	11	280	6.60e-34	126
Msa0291150	MtrunA17_Chr2g0316181	33.333	291	139	10	75	331	11	280	6.60e-34	126
Msa0291150	MtrunA17_Chr1g0181501	35.897	195	110	5	142	331	6	190	1.05e-27	107
Msa0291150	MtrunA17_Chr3g0104101	40.411	146	76	6	193	331	9	150	6.71e-24	95.9
Msa0291150	MtrunA17_Chr5g0432321	40.323	124	66	2	150	273	17	132	8.11e-21	87.0
Msa0291150	MtrunA17_Chr1g0181491	42.991	107	59	2	26	132	9	113	8.75e-20	84.7
Msa0291150	MtrunA17_Chr6g0468731	54.930	71	28	2	68	138	22	88	1.95e-17	76.6
Msa0291150	MtrunA17_Chr7g0254181	37.600	125	73	3	72	195	2	122	3.54e-17	77.8
Msa0291150	MtrunA17_Chr5g0432361	42.529	87	49	1	243	329	23	108	6.77e-16	72.8
Msa0291150	MtrunA17_Chr1g0196191	54.930	71	29	2	63	133	21	88	2.39e-14	70.1
Msa0291150	MtrunA17_Chr7g0268491	41.414	99	54	3	232	330	3	97	7.63e-14	67.0
Msa0291150	MtrunA17_Chr3g0137751	26.471	272	152	8	44	314	91	315	2.13e-13	70.1
Msa0291150	MtrunA17_Chr4g0013811	44.444	72	40	0	141	212	7	78	4.11e-13	64.3
Msa0291150	MtrunA17_Chr5g0423911	47.059	68	34	1	259	326	2	67	7.73e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291150	AT5G06730.1	55.723	332	145	1	14	343	18	349	1.99e-132	382
Msa0291150	AT5G06720.1	56.467	317	138	0	14	330	17	333	1.33e-131	379
Msa0291150	AT2G38380.1	55.255	333	139	3	24	355	26	349	5.25e-128	371
Msa0291150	AT2G38390.1	53.754	333	144	3	24	355	26	349	2.70e-126	367
Msa0291150	AT3G49120.1	54.277	339	150	3	14	347	14	352	5.98e-124	361
Msa0291150	AT3G32980.1	55.385	325	143	2	25	347	27	351	5.35e-123	358
Msa0291150	AT4G08770.1	54.688	320	143	2	25	342	20	339	1.48e-120	352
Msa0291150	AT3G49110.1	54.769	325	145	2	25	347	29	353	5.37e-120	351
Msa0291150	AT4G08780.1	53.125	320	148	2	25	342	20	339	8.36e-117	342
Msa0291150	AT5G19880.1	52.751	309	143	2	25	330	21	329	9.59e-113	331
Msa0291150	AT2G18150.1	51.645	304	146	1	27	330	34	336	1.30e-108	321
Msa0291150	AT2G18140.1	49.231	325	160	2	6	330	16	335	4.20e-108	320
Msa0291150	AT5G66390.1	50.000	308	153	1	23	330	27	333	6.59e-107	317
Msa0291150	AT4G36430.1	51.623	308	148	1	24	331	25	331	8.09e-107	316
Msa0291150	AT5G19890.1	51.466	307	141	4	27	331	28	328	1.57e-103	308
Msa0291150	AT3G50990.1	50.163	307	152	1	24	330	36	341	3.23e-103	308
Msa0291150	AT1G44970.1	49.518	311	155	1	20	330	38	346	2.69e-101	303
Msa0291150	AT1G14550.1	48.366	306	150	3	26	330	23	321	3.90e-97	291
Msa0291150	AT5G05340.1	47.712	306	149	3	27	330	28	324	7.66e-96	288
Msa0291150	AT1G14540.1	46.894	322	164	3	9	330	1	315	6.19e-94	283
Msa0291150	AT4G16270.1	47.855	303	153	4	29	330	50	348	6.97e-94	284
Msa0291150	AT1G49570.1	45.574	305	161	3	27	328	46	348	8.88e-92	278
Msa0291150	AT1G68850.1	46.053	304	158	5	33	331	34	336	2.52e-90	275
Msa0291150	AT1G05260.1	42.643	333	182	6	1	331	1	326	1.10e-87	267
Msa0291150	AT4G11290.1	42.462	325	182	4	8	330	5	326	6.87e-86	263
Msa0291150	AT2G41480.1	44.037	327	169	6	9	330	11	328	9.69e-86	262
Msa0291150	AT2G35380.1	47.351	302	155	3	33	330	34	335	9.84e-85	260
Msa0291150	AT5G58400.1	44.343	327	167	5	3	326	7	321	1.24e-84	259
Msa0291150	AT5G58390.1	45.570	316	160	5	14	326	6	312	1.72e-84	259
Msa0291150	AT1G71695.1	45.779	308	155	6	29	333	44	342	2.79e-84	259
Msa0291150	AT3G03670.1	43.092	304	170	2	27	330	21	321	3.07e-84	258
Msa0291150	AT2G22420.1	40.588	340	191	4	1	340	1	329	2.32e-83	256
Msa0291150	AT2G18980.1	45.963	322	161	6	15	330	9	323	2.88e-83	256
Msa0291150	AT3G21770.1	42.342	333	186	5	1	331	1	329	6.29e-83	255
Msa0291150	AT5G15180.1	42.903	310	166	6	25	330	27	329	1.27e-82	254
Msa0291150	AT3G01190.1	42.105	323	178	7	9	330	7	321	2.08e-81	251
Msa0291150	AT5G64120.1	41.390	331	176	6	10	330	6	328	2.34e-81	251
Msa0291150	AT5G14130.1	43.711	318	170	5	18	330	17	330	2.36e-81	251
Msa0291150	AT5G14130.2	43.711	318	170	5	18	330	58	371	5.56e-81	251
Msa0291150	AT4G30170.1	44.984	309	159	5	26	330	24	325	6.30e-81	250
Msa0291150	AT1G05240.1	44.156	308	158	5	29	330	26	325	1.80e-80	249
Msa0291150	AT1G05250.1	44.156	308	158	5	29	330	26	325	1.80e-80	249
Msa0291150	AT5G67400.1	42.331	326	181	4	9	330	7	329	2.13e-79	246
Msa0291150	AT5G51890.1	43.322	307	167	5	25	330	22	322	2.32e-79	246
Msa0291150	AT5G17820.1	41.447	304	166	5	27	330	22	313	3.92e-79	245
Msa0291150	AT4G37530.1	43.042	309	171	3	25	330	23	329	3.31e-78	243
Msa0291150	AT5G17820.2	41.447	304	166	5	27	330	75	366	7.80e-78	243
Msa0291150	AT4G25980.1	40.673	327	179	6	9	330	10	326	1.67e-76	239
Msa0291150	AT5G39580.1	41.265	332	177	8	1	330	4	319	2.22e-76	238
Msa0291150	AT3G49960.1	42.025	326	179	5	9	330	10	329	2.87e-76	238
Msa0291150	AT4G37520.1	41.042	307	176	3	27	330	25	329	7.15e-74	232
Msa0291150	AT5G64110.1	44.371	302	155	7	33	330	38	330	8.12e-74	232
Msa0291150	AT4G37520.2	40.717	307	174	4	27	330	25	326	2.30e-72	228
Msa0291150	AT4G33420.1	38.532	327	187	7	4	330	13	325	3.44e-72	228
Msa0291150	AT5G64100.1	42.193	301	161	7	33	330	41	331	3.46e-72	228
Msa0291150	AT2G39040.1	42.444	311	168	7	27	330	44	350	5.53e-72	228
Msa0291150	AT4G33420.2	38.532	327	187	7	4	330	60	372	1.39e-71	228
Msa0291150	AT5G42180.1	39.628	323	185	7	8	329	3	316	3.70e-70	222
Msa0291150	AT2G34060.1	39.935	308	176	6	26	327	39	343	8.45e-69	219
Msa0291150	AT2G24800.1	40.909	308	171	5	27	330	29	329	8.96e-69	219
Msa0291150	AT4G33870.1	35.629	334	169	6	33	327	72	398	1.45e-67	218
Msa0291150	AT5G24070.1	38.462	338	187	8	4	331	10	336	2.42e-67	216
Msa0291150	AT4G31760.1	38.387	310	183	3	23	330	23	326	3.95e-67	214
Msa0291150	AT4G37530.2	44.358	257	140	2	25	278	23	279	6.35e-67	213
Msa0291150	AT1G77100.1	39.210	329	184	7	7	330	2	319	1.34e-66	213
Msa0291150	AT4G17690.1	39.216	306	175	5	29	331	26	323	7.69e-66	211
Msa0291150	AT2G43480.1	37.391	345	184	10	7	330	2	335	1.51e-65	211
Msa0291150	AT5G40150.1	39.423	312	180	4	21	330	24	328	2.14e-65	210
Msa0291150	AT1G24110.1	38.037	326	193	6	8	330	3	322	3.28e-65	209
Msa0291150	AT5G47000.1	37.730	326	192	6	9	331	14	331	7.29e-65	209
Msa0291150	AT4G26010.1	40.193	311	164	8	24	330	17	309	1.65e-64	207
Msa0291150	AT4G26010.2	40.193	311	164	8	24	330	45	337	1.87e-64	208
Msa0291150	AT3G28200.1	37.540	309	183	4	24	330	16	316	8.61e-63	203
Msa0291150	AT1G30870.1	38.816	304	173	6	33	333	55	348	2.31e-62	203
Msa0291150	AT5G22410.1	37.013	308	174	8	27	326	26	321	3.58e-61	199
Msa0291150	AT2G35380.2	45.344	247	131	3	88	330	1	247	1.35e-60	195
Msa0291150	AT4G21960.1	37.829	304	176	5	32	331	34	328	3.30e-60	197
Msa0291150	AT1G34510.1	39.414	307	168	8	27	331	20	310	3.55e-60	196
Msa0291150	AT3G17070.1	38.390	323	181	9	17	330	26	339	9.67e-58	191
Msa0291150	AT2G37130.1	36.570	309	184	5	26	330	27	327	1.19e-55	185
Msa0291150	AT2G37130.2	36.634	303	180	5	32	330	2	296	2.29e-54	181
Msa0291150	AT4G25980.2	40.343	233	126	5	9	236	55	279	6.74e-49	166
Msa0291150	AT3G17070.2	37.546	269	149	10	71	330	18	276	5.31e-41	145
Msa0291150	AT5G39580.2	42.157	204	104	5	1	203	4	194	1.24e-40	143
Msa0291150	AT2G24800.2	42.442	172	95	1	27	198	29	196	2.63e-37	134
Msa0291150	AT1G77490.2	28.137	263	151	9	63	314	106	341	1.28e-15	78.2
Msa0291150	AT1G77490.1	28.137	263	151	9	63	314	106	341	1.80e-15	77.4
Msa0291150	AT3G09640.2	25.352	213	117	5	103	313	74	246	3.45e-13	68.9
Msa0291150	AT3G09640.1	25.352	213	117	5	103	313	74	246	3.45e-13	68.9
Msa0291150	AT3G42570.1	31.507	146	87	4	53	196	15	149	3.17e-11	61.2

Find 86 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCATTTGAAGTGTTTCTT+TGG	0.211594	2_3:-39274864	Msa0291150:three_prime_UTR
TGGACAAGTGTTCCTGTAAA+AGG	0.264524	2_3:+39276924	None:intergenic
CTAATTAGCATGTAAATTAA+TGG	0.267296	2_3:+39274744	None:intergenic
TAGGGCTGCTATGATCAAAA+TGG	0.283772	2_3:-39275132	Msa0291150:CDS
GGAAATATTGGTGTGTTAAC+CGG	0.297989	2_3:-39275110	Msa0291150:CDS
TTCATTTGAAGTGTTTCTTT+GGG	0.300080	2_3:-39274863	Msa0291150:three_prime_UTR
CGATATGTAGCAGTACTATT+TGG	0.304572	2_3:-39277216	Msa0291150:five_prime_UTR
TCTAATCTCTCCTTGGTTCC+CGG	0.308228	2_3:+39275091	None:intergenic
CCTCTTAATGAGTTTCTGTT+TGG	0.310696	2_3:+39275978	None:intergenic
ATTTCAGGTGCTCATACATT+TGG	0.340486	2_3:-39275464	Msa0291150:intron
TAGTTCTTGTCAAATTTATC+AGG	0.341189	2_3:+39275284	None:intergenic
CAGAAACTCATTAAGAGGTT+TGG	0.342785	2_3:-39275973	Msa0291150:CDS
CGAACAATGGAACTAACATT+TGG	0.350033	2_3:+39276904	None:intergenic
AGGAGTCGTTGGATCGAAAT+TGG	0.358608	2_3:+39275304	None:intergenic
CCAAACAGAAACTCATTAAG+AGG	0.372095	2_3:-39275978	Msa0291150:CDS
CCTGACTGGAAGGTTCCTTT+AGG	0.381585	2_3:-39275731	Msa0291150:CDS
TGCTGTATTGTGGTTGTGCT+TGG	0.382429	2_3:-39276985	Msa0291150:CDS
CAAGAGTTGTTCTCAACATC+TGG	0.390230	2_3:-39275218	Msa0291150:CDS
ATGATCAAAATGGGAAATAT+TGG	0.401401	2_3:-39275122	Msa0291150:CDS
TAATTAGCATGTAAATTAAT+GGG	0.406068	2_3:+39274745	None:intergenic
GTTATAACTATGCACATTCA+TGG	0.434426	2_3:-39274935	Msa0291150:three_prime_UTR
CCATTGTTCGTGAAGTCATA+AGG	0.434806	2_3:-39276891	Msa0291150:CDS
GAATTTGTTGACAATGCTAA+TGG	0.449121	2_3:+39275187	None:intergenic
CTCAATGTAAATGTAGTGAT+TGG	0.450297	2_3:-39274979	Msa0291150:exon
GTATGCTTGCTAGTCTTGTC+AGG	0.452656	2_3:-39276846	Msa0291150:CDS
AAACCATCTCTTCTTCCTAA+AGG	0.452959	2_3:+39275716	None:intergenic
ACTGATCTGGTTGCCCTCTC+CGG	0.453021	2_3:-39275596	Msa0291150:intron
TTGTACAACTTCAGCGGTAC+GGG	0.454738	2_3:-39275410	Msa0291150:CDS
AATCAAAACAGCTGTGGAAA+AGG	0.458727	2_3:-39275937	Msa0291150:CDS
TGTATTGTGGTTGTGCTTGG+AGG	0.464666	2_3:-39276982	Msa0291150:CDS
TCAGCACAAGAAACTGTGTT+AGG	0.474603	2_3:+39275909	None:intergenic
AATTCAAAATCAGCAGAACT+TGG	0.476123	2_3:-39275050	Msa0291150:CDS
AAGTAAGTTGTGTTAAGAGT+TGG	0.480928	2_3:+39275377	None:intergenic
AGGTCTCGACACTACTGATC+TGG	0.490530	2_3:-39275609	Msa0291150:CDS
AATAGGCAGATGGTCCTGAC+TGG	0.492532	2_3:-39275745	Msa0291150:intron
AGATTCATCTGAGGAGGGTA+TGG	0.494872	2_3:-39275006	Msa0291150:CDS
AGATGATAATTCAGCTGAAA+GGG	0.495878	2_3:+39275878	None:intergenic
CCTAAAGGAACCTTCCAGTC+AGG	0.502692	2_3:+39275731	None:intergenic
AGGGCTGCTATGATCAAAAT+GGG	0.502945	2_3:-39275131	Msa0291150:CDS
TTCGTGCCAGGTCCACCATT+GGG	0.506163	2_3:+39275332	None:intergenic
TCATGAATGGCTCCTAGAAA+AGG	0.506422	2_3:+39277127	None:intergenic
GTATTGTGGTTGTGCTTGGA+GGG	0.513541	2_3:-39276981	Msa0291150:CDS
TCAGTAGTATTGAAAGGAGC+TGG	0.514353	2_3:+39275659	None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG	0.517053	2_3:+39275382	None:intergenic
TCAAATTTATCAGGAGTCGT+TGG	0.517441	2_3:+39275293	None:intergenic
GAAATATTGGTGTGTTAACC+GGG	0.517789	2_3:-39275109	Msa0291150:CDS
AATAGCTTTGTGCTGTATTG+TGG	0.521315	2_3:-39276995	Msa0291150:CDS
CCTTATGACTTCACGAACAA+TGG	0.525359	2_3:+39276891	None:intergenic
ATATGTCCCAATGGTGGACC+TGG	0.533119	2_3:-39275338	Msa0291150:CDS
TACCGCTGAAGTTGTACAAT+CGG	0.535831	2_3:+39275414	None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG	0.538902	2_3:+39276954	None:intergenic
TAGATGATAATTCAGCTGAA+AGG	0.542694	2_3:+39275877	None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG	0.546841	2_3:+39275331	None:intergenic
AGTTCATCAGTAGTATTGAA+AGG	0.552774	2_3:+39275653	None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG	0.555195	2_3:+39275383	None:intergenic
AAATGACAATGAGTCATGAA+TGG	0.557101	2_3:+39277114	None:intergenic
GGTCAATATTCACACCTCAA+TGG	0.557609	2_3:-39277179	Msa0291150:five_prime_UTR
AATATACAATACTATATGCA+TGG	0.560151	2_3:+39274718	None:intergenic
AAAACTGCATTTGCTGCTCA+AGG	0.561218	2_3:-39275629	Msa0291150:CDS
GGCAGATGGTCCTGACTGGA+AGG	0.562824	2_3:-39275741	Msa0291150:CDS
AGCTATTGCTACAGCACGAA+GGG	0.567185	2_3:+39277011	None:intergenic
ATTGTACAACTTCAGCGGTA+CGG	0.567546	2_3:-39275411	Msa0291150:CDS
CTCAGCAGATTCATCTGAGG+AGG	0.567597	2_3:-39275012	Msa0291150:CDS
AGTTGTGCATTTGAAGAGAA+GGG	0.569161	2_3:+39276955	None:intergenic
TCGTTGGATCGAAATTGGTA+AGG	0.570774	2_3:+39275309	None:intergenic
AAAATGTTACATACCGGAGA+GGG	0.575364	2_3:+39275583	None:intergenic
CAAGTGTTCCTGTAAAAGGA+TGG	0.579502	2_3:+39276928	None:intergenic
ATGGGAAATATCATACAAAG+TGG	0.582872	2_3:+39274763	None:intergenic
GTTCCTTTAGGAAGAAGAGA+TGG	0.584332	2_3:-39275719	Msa0291150:CDS
AAATTGGTAAGGTTCGTGCC+AGG	0.584556	2_3:+39275320	None:intergenic
CGCACAATATGTCCCAATGG+TGG	0.600150	2_3:-39275344	Msa0291150:CDS
AGCTGAATTATCATCTACAC+TGG	0.606092	2_3:-39275871	Msa0291150:intron
TGAGAACATTATTACCATTG+AGG	0.607588	2_3:+39277165	None:intergenic
GAATCAAATCAAAACAGCTG+TGG	0.608984	2_3:-39275943	Msa0291150:CDS
GATGAAATAAAATAGGCAGA+TGG	0.618837	2_3:-39275755	Msa0291150:intron
AGCCGATTGTACAACTTCAG+CGG	0.631715	2_3:-39275416	Msa0291150:CDS
AGCATCTTGTTCACTCACAA+CGG	0.632766	2_3:+39276004	None:intergenic
CTCCTCAGATGAATCTGCTG+AGG	0.635056	2_3:+39275013	None:intergenic
TTGCGCACAATATGTCCCAA+TGG	0.640051	2_3:-39275347	Msa0291150:CDS
GGTGTGTTAACCGGGAACCA+AGG	0.643371	2_3:-39275101	Msa0291150:CDS
TCAGCAGATTCATCTGAGGA+GGG	0.667386	2_3:-39275011	Msa0291150:CDS
AAGCTATTGCTACAGCACGA+AGG	0.675693	2_3:+39277010	None:intergenic
AATATTGACCGAATAAAACA+AGG	0.681030	2_3:+39277192	None:intergenic
ACAAGACTAGCAAGCATACG+AGG	0.681087	2_3:+39276850	None:intergenic
TGGCTCCTAGAAAAGGCTTG+TGG	0.686774	2_3:+39277134	None:intergenic
TGCCTCAGCAGATTCATCTG+AGG	0.692262	2_3:-39275015	Msa0291150:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGTATAAAAAATTCTAAT+TGG	-	chr2_3:39276390-39276409	Msa0291150:intron	10.0%
!!	TAGCAAATAAGTAATATATT+TGG	-	chr2_3:39275321-39275340	Msa0291150:CDS	15.0%
!!!	ATTTTTCAAAAAAGAAAGAT+TGG	+	chr2_3:39275754-39275773	None:intergenic	15.0%
!!	AAAATATATAGTATAGTTTG+AGG	+	chr2_3:39276108-39276127	None:intergenic	15.0%
!!	AATTGAATTTGAAAATTCAT+TGG	+	chr2_3:39276140-39276159	None:intergenic	15.0%
!!	TAATTAGCATGTAAATTAAT+GGG	+	chr2_3:39277201-39277220	None:intergenic	15.0%
!!	TCATACTACTATAAGATTAT+AGG	+	chr2_3:39275237-39275256	None:intergenic	20.0%
!!	TGTACTAATTCTACTTAAAT+GGG	+	chr2_3:39275264-39275283	None:intergenic	20.0%
!!	ATGTACTAATTCTACTTAAA+TGG	+	chr2_3:39275265-39275284	None:intergenic	20.0%
!!	ATTAGTTGTATAACATAGAT+AGG	+	chr2_3:39275364-39275383	None:intergenic	20.0%
!!	TACTAATTAACAAAACAGAA+AGG	+	chr2_3:39275480-39275499	None:intergenic	20.0%
!!	TTGAAAAATAAAGTTATCGA+TGG	-	chr2_3:39275765-39275784	Msa0291150:intron	20.0%
!!!	GTTTTGTGATGAAATAAAAT+AGG	-	chr2_3:39276181-39276200	Msa0291150:intron	20.0%
!!!	GATTTTTATTAGCAAGTAAT+TGG	+	chr2_3:39276262-39276281	None:intergenic	20.0%
!!	ACTTAAAAAATGTTACATAC+CGG	+	chr2_3:39276369-39276388	None:intergenic	20.0%
!!	CTAATTAGCATGTAAATTAA+TGG	+	chr2_3:39277202-39277221	None:intergenic	20.0%
!!!	TATTTGGACCTTGTTTTATT+CGG	-	chr2_3:39274743-39274762	Msa0291150:three_prime_UTR	25.0%
!	AATATTGACCGAATAAAACA+AGG	+	chr2_3:39274754-39274773	None:intergenic	25.0%
!	ATTAGTATATCCGTATATGA+CGG	-	chr2_3:39275493-39275512	Msa0291150:intron	25.0%
!	TATATATGTTTCTCGATTTC+AGG	-	chr2_3:39276464-39276483	Msa0291150:intron	25.0%
!	TAGTTCTTGTCAAATTTATC+AGG	+	chr2_3:39276662-39276681	None:intergenic	25.0%
!	TCTAATCTTCAAGTGAAAAA+AGG	-	chr2_3:39276686-39276705	Msa0291150:intron	25.0%
!!	CTCAAAAAAAGCTTTTTGAT+CGG	+	chr2_3:39276786-39276805	None:intergenic	25.0%
!	ATGATCAAAATGGGAAATAT+TGG	-	chr2_3:39276821-39276840	Msa0291150:CDS	25.0%
!!	TTTCATTTGAAGTGTTTCTT+TGG	-	chr2_3:39277079-39277098	Msa0291150:five_prime_UTR	25.0%
!!	TTCATTTGAAGTGTTTCTTT+GGG	-	chr2_3:39277080-39277099	Msa0291150:five_prime_UTR	25.0%
	TGAGAACATTATTACCATTG+AGG	+	chr2_3:39274781-39274800	None:intergenic	30.0%
	AAATGACAATGAGTCATGAA+TGG	+	chr2_3:39274832-39274851	None:intergenic	30.0%
	GCTATAAATTCTTGACTTCT+TGG	-	chr2_3:39275207-39275226	Msa0291150:CDS	30.0%
	TACTGACATGTTACATTCAA+TGG	+	chr2_3:39275543-39275562	None:intergenic	30.0%
!!	TGACTGACTTTAAAACCTTT+AGG	+	chr2_3:39275791-39275810	None:intergenic	30.0%
	ATTATGCATGTTATTGTAGC+CGG	+	chr2_3:39275825-39275844	None:intergenic	30.0%
	AGATGATAATTCAGCTGAAA+GGG	+	chr2_3:39276068-39276087	None:intergenic	30.0%
	TAGATGATAATTCAGCTGAA+AGG	+	chr2_3:39276069-39276088	None:intergenic	30.0%
	GATGAAATAAAATAGGCAGA+TGG	-	chr2_3:39276188-39276207	Msa0291150:intron	30.0%
!	AGTTCATCAGTAGTATTGAA+AGG	+	chr2_3:39276293-39276312	None:intergenic	30.0%
	AAGTAAGTTGTGTTAAGAGT+TGG	+	chr2_3:39276569-39276588	None:intergenic	30.0%
!!	GAATTTGTTGACAATGCTAA+TGG	+	chr2_3:39276759-39276778	None:intergenic	30.0%
!!!	AAGCTTTTTTTGAGAGCTTT+AGG	-	chr2_3:39276792-39276811	Msa0291150:intron	30.0%
!!!	AGCTTTTTTTGAGAGCTTTA+GGG	-	chr2_3:39276793-39276812	Msa0291150:intron	30.0%
!	ATTGTTTTCTAATCTCTCCT+TGG	+	chr2_3:39276862-39276881	None:intergenic	30.0%
	AATTCAAAATCAGCAGAACT+TGG	-	chr2_3:39276893-39276912	Msa0291150:CDS	30.0%
	CTCAATGTAAATGTAGTGAT+TGG	-	chr2_3:39276964-39276983	Msa0291150:CDS	30.0%
	GTTATAACTATGCACATTCA+TGG	-	chr2_3:39277008-39277027	Msa0291150:CDS	30.0%
	ATGGGAAATATCATACAAAG+TGG	+	chr2_3:39277183-39277202	None:intergenic	30.0%
	CGATATGTAGCAGTACTATT+TGG	-	chr2_3:39274727-39274746	Msa0291150:three_prime_UTR	35.0%
!!	AATAGCTTTGTGCTGTATTG+TGG	-	chr2_3:39274948-39274967	Msa0291150:three_prime_UTR	35.0%
	AGTTGTGCATTTGAAGAGAA+GGG	+	chr2_3:39274991-39275010	None:intergenic	35.0%
	AAGTTGTGCATTTGAAGAGA+AGG	+	chr2_3:39274992-39275011	None:intergenic	35.0%
!	AACTTGATCCATCCTTTTAC+AGG	-	chr2_3:39275007-39275026	Msa0291150:CDS	35.0%
	CGAACAATGGAACTAACATT+TGG	+	chr2_3:39275042-39275061	None:intergenic	35.0%
!	TATTCGAACTCAAGTTTGCT+AGG	+	chr2_3:39275432-39275451	None:intergenic	35.0%
!!	GTGTTGAATGATTAGTTCTG+AGG	+	chr2_3:39275641-39275660	None:intergenic	35.0%
	TAAAGTTATCGATGGCCTAA+AGG	-	chr2_3:39275773-39275792	Msa0291150:intron	35.0%
	GTCAGTCATGTAAAGTTATC+CGG	-	chr2_3:39275803-39275822	Msa0291150:intron	35.0%
	CCTCTTAATGAGTTTCTGTT+TGG	+	chr2_3:39275968-39275987	None:intergenic	35.0%
	CCAAACAGAAACTCATTAAG+AGG	-	chr2_3:39275965-39275984	Msa0291150:CDS	35.0%
	CAGAAACTCATTAAGAGGTT+TGG	-	chr2_3:39275970-39275989	Msa0291150:CDS	35.0%
	GAATCAAATCAAAACAGCTG+TGG	-	chr2_3:39276000-39276019	Msa0291150:CDS	35.0%
	AATCAAAACAGCTGTGGAAA+AGG	-	chr2_3:39276006-39276025	Msa0291150:CDS	35.0%
	AGCTGAATTATCATCTACAC+TGG	-	chr2_3:39276072-39276091	Msa0291150:intron	35.0%
	AAACCATCTCTTCTTCCTAA+AGG	+	chr2_3:39276230-39276249	None:intergenic	35.0%
	AAAATGTTACATACCGGAGA+GGG	+	chr2_3:39276363-39276382	None:intergenic	35.0%
	AAAAATGTTACATACCGGAG+AGG	+	chr2_3:39276364-39276383	None:intergenic	35.0%
!	ATTTCAGGTGCTCATACATT+TGG	-	chr2_3:39276479-39276498	Msa0291150:intron	35.0%
	AGTTGTGTTAAGAGTTGGAT+CGG	+	chr2_3:39276564-39276583	None:intergenic	35.0%
	TCAAATTTATCAGGAGTCGT+TGG	+	chr2_3:39276653-39276672	None:intergenic	35.0%
	GGAAATATTGGTGTGTTAAC+CGG	-	chr2_3:39276833-39276852	Msa0291150:CDS	35.0%
	GAAATATTGGTGTGTTAACC+GGG	-	chr2_3:39276834-39276853	Msa0291150:CDS	35.0%
	GGTCAATATTCACACCTCAA+TGG	-	chr2_3:39274764-39274783	Msa0291150:three_prime_UTR	40.0%
!	ATCAACCACAAGCCTTTTCT+AGG	-	chr2_3:39274804-39274823	Msa0291150:three_prime_UTR	40.0%
	TCATGAATGGCTCCTAGAAA+AGG	+	chr2_3:39274819-39274838	None:intergenic	40.0%
	CAAGTGTTCCTGTAAAAGGA+TGG	+	chr2_3:39275018-39275037	None:intergenic	40.0%
	TGGACAAGTGTTCCTGTAAA+AGG	+	chr2_3:39275022-39275041	None:intergenic	40.0%
	CCTTATGACTTCACGAACAA+TGG	+	chr2_3:39275055-39275074	None:intergenic	40.0%
	CCATTGTTCGTGAAGTCATA+AGG	-	chr2_3:39275052-39275071	Msa0291150:CDS	40.0%
	AGTATATCCGTATATGACGG+TGG	-	chr2_3:39275496-39275515	Msa0291150:intron	40.0%
	GTATATCCGTATATGACGGT+GGG	-	chr2_3:39275497-39275516	Msa0291150:intron	40.0%
	ATGTGATCCATGACTGTAAC+AGG	-	chr2_3:39275880-39275899	Msa0291150:CDS	40.0%
	TGTGATCCATGACTGTAACA+GGG	-	chr2_3:39275881-39275900	Msa0291150:CDS	40.0%
	AGCATCTTGTTCACTCACAA+CGG	+	chr2_3:39275942-39275961	None:intergenic	40.0%
	TCAGCACAAGAAACTGTGTT+AGG	+	chr2_3:39276037-39276056	None:intergenic	40.0%
!	GTTCCTTTAGGAAGAAGAGA+TGG	-	chr2_3:39276224-39276243	Msa0291150:intron	40.0%
!	TCAGTAGTATTGAAAGGAGC+TGG	+	chr2_3:39276287-39276306	None:intergenic	40.0%
!	AAAACTGCATTTGCTGCTCA+AGG	-	chr2_3:39276314-39276333	Msa0291150:intron	40.0%
	TACCGCTGAAGTTGTACAAT+CGG	+	chr2_3:39276532-39276551	None:intergenic	40.0%
	ATTGTACAACTTCAGCGGTA+CGG	-	chr2_3:39276532-39276551	Msa0291150:intron	40.0%
	GTTGTGTTAAGAGTTGGATC+GGG	+	chr2_3:39276563-39276582	None:intergenic	40.0%
	TCGTTGGATCGAAATTGGTA+AGG	+	chr2_3:39276637-39276656	None:intergenic	40.0%
	CAAGAGTTGTTCTCAACATC+TGG	-	chr2_3:39276725-39276744	Msa0291150:intron	40.0%
	TAGGGCTGCTATGATCAAAA+TGG	-	chr2_3:39276811-39276830	Msa0291150:intron	40.0%
	AGGGCTGCTATGATCAAAAT+GGG	-	chr2_3:39276812-39276831	Msa0291150:intron	40.0%
	AGCTATTGCTACAGCACGAA+GGG	+	chr2_3:39274935-39274954	None:intergenic	45.0%
	AAGCTATTGCTACAGCACGA+AGG	+	chr2_3:39274936-39274955	None:intergenic	45.0%
	TGCTGTATTGTGGTTGTGCT+TGG	-	chr2_3:39274958-39274977	Msa0291150:three_prime_UTR	45.0%
	TGTATTGTGGTTGTGCTTGG+AGG	-	chr2_3:39274961-39274980	Msa0291150:three_prime_UTR	45.0%
	GTATTGTGGTTGTGCTTGGA+GGG	-	chr2_3:39274962-39274981	Msa0291150:three_prime_UTR	45.0%
	ACAAGACTAGCAAGCATACG+AGG	+	chr2_3:39275096-39275115	None:intergenic	45.0%
!!	GTATGCTTGCTAGTCTTGTC+AGG	-	chr2_3:39275097-39275116	Msa0291150:CDS	45.0%
	ACATAGATAGGAGCAGCACA+AGG	+	chr2_3:39275352-39275371	None:intergenic	45.0%
	TCACAACCCTGTTACAGTCA+TGG	+	chr2_3:39275890-39275909	None:intergenic	45.0%
	AGCCGATTGTACAACTTCAG+CGG	-	chr2_3:39276527-39276546	Msa0291150:intron	45.0%
	TTGTACAACTTCAGCGGTAC+GGG	-	chr2_3:39276533-39276552	Msa0291150:intron	45.0%
	TTGCGCACAATATGTCCCAA+TGG	-	chr2_3:39276596-39276615	Msa0291150:intron	45.0%
	AAATTGGTAAGGTTCGTGCC+AGG	+	chr2_3:39276626-39276645	None:intergenic	45.0%
	AGGAGTCGTTGGATCGAAAT+TGG	+	chr2_3:39276642-39276661	None:intergenic	45.0%
	TCTAATCTCTCCTTGGTTCC+CGG	+	chr2_3:39276855-39276874	None:intergenic	45.0%
	TCAGCAGATTCATCTGAGGA+GGG	-	chr2_3:39276932-39276951	Msa0291150:CDS	45.0%
	AGATTCATCTGAGGAGGGTA+TGG	-	chr2_3:39276937-39276956	Msa0291150:CDS	45.0%
!!!	TTATAATGTATATTTTTTTT+CGG	+	chr2_3:39275595-39275614	None:intergenic	5.0%
	TGGCTCCTAGAAAAGGCTTG+TGG	+	chr2_3:39274812-39274831	None:intergenic	50.0%
	GTTCGACCCACCGTCATATA+CGG	+	chr2_3:39275506-39275525	None:intergenic	50.0%
	ATATGACGGTGGGTCGAACA+AGG	-	chr2_3:39275507-39275526	Msa0291150:intron	50.0%
	AATAGGCAGATGGTCCTGAC+TGG	-	chr2_3:39276198-39276217	Msa0291150:intron	50.0%
	CCTAAAGGAACCTTCCAGTC+AGG	+	chr2_3:39276215-39276234	None:intergenic	50.0%
	CCTGACTGGAAGGTTCCTTT+AGG	-	chr2_3:39276212-39276231	Msa0291150:intron	50.0%
	AGGTCTCGACACTACTGATC+TGG	-	chr2_3:39276334-39276353	Msa0291150:intron	50.0%
	CGCACAATATGTCCCAATGG+TGG	-	chr2_3:39276599-39276618	Msa0291150:intron	50.0%
!!	ATATGTCCCAATGGTGGACC+TGG	-	chr2_3:39276605-39276624	Msa0291150:intron	50.0%
	TGCCTCAGCAGATTCATCTG+AGG	-	chr2_3:39276928-39276947	Msa0291150:CDS	50.0%
	CTCCTCAGATGAATCTGCTG+AGG	+	chr2_3:39276933-39276952	None:intergenic	50.0%
	CTCAGCAGATTCATCTGAGG+AGG	-	chr2_3:39276931-39276950	Msa0291150:CDS	50.0%
	ACTGATCTGGTTGCCCTCTC+CGG	-	chr2_3:39276347-39276366	Msa0291150:intron	55.0%
	TTCGTGCCAGGTCCACCATT+GGG	+	chr2_3:39276614-39276633	None:intergenic	55.0%
	GGTGTGTTAACCGGGAACCA+AGG	-	chr2_3:39276842-39276861	Msa0291150:CDS	55.0%
	GGCAGATGGTCCTGACTGGA+AGG	-	chr2_3:39276202-39276221	Msa0291150:intron	60.0%
	GTTCGTGCCAGGTCCACCAT+TGG	+	chr2_3:39276615-39276634	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_3	gene	39274725	39277240	39274725	ID=Msa0291150;Name=Msa0291150
chr2_3	mRNA	39274725	39277240	39274725	ID=Msa0291150-mRNA-1;Parent=Msa0291150;Name=Msa0291150-mRNA-1;_AED=0.34;_eAED=0.34;_QI=200\|1\|1\|1\|1\|1\|4\|267\|355
chr2_3	exon	39274725	39275479	39274725	ID=Msa0291150-mRNA-1:exon:12748;Parent=Msa0291150-mRNA-1
chr2_3	exon	39275597	39275762	39275597	ID=Msa0291150-mRNA-1:exon:12747;Parent=Msa0291150-mRNA-1
chr2_3	exon	39275872	39276063	39275872	ID=Msa0291150-mRNA-1:exon:12746;Parent=Msa0291150-mRNA-1
chr2_3	exon	39276819	39277240	39276819	ID=Msa0291150-mRNA-1:exon:12745;Parent=Msa0291150-mRNA-1
chr2_3	five_prime_UTR	39277041	39277240	39277041	ID=Msa0291150-mRNA-1:five_prime_utr;Parent=Msa0291150-mRNA-1
chr2_3	CDS	39276819	39277040	39276819	ID=Msa0291150-mRNA-1:cds;Parent=Msa0291150-mRNA-1
chr2_3	CDS	39275872	39276063	39275872	ID=Msa0291150-mRNA-1:cds;Parent=Msa0291150-mRNA-1
chr2_3	CDS	39275597	39275762	39275597	ID=Msa0291150-mRNA-1:cds;Parent=Msa0291150-mRNA-1
chr2_3	CDS	39274992	39275479	39274992	ID=Msa0291150-mRNA-1:cds;Parent=Msa0291150-mRNA-1
chr2_3	three_prime_UTR	39274725	39274991	39274725	ID=Msa0291150-mRNA-1:three_prime_utr;Parent=Msa0291150-mRNA-1

Gene Sequence

>Msa0291150

ATGAACTCCCTTCGTGCTGTAGCAATAGCTTTGTGCTGTATTGTGGTTGTGCTTGGAGGGTTACCCTTCTCTTCAAATGCACAACTTGATCCATCCTTTTACAGGAACACTTGTCCAAATGTTAGTTCCATTGTTCGTGAAGTCATAAGGAGTGTTTCTAAGAAAGATCCTCGTATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGTTGTGATGCATCAGTTTTACTAAACAAAACTGATACCGTTGTGAGTGAACAAGATGCTTTTCCAAACAGAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAAGGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCCCTTTCAGCTGAATTATCATCTACACTGGCAGATGGTCCTGACTGGAAGGTTCCTTTAGGAAGAAGAGATGGTTTAACAGCAAACCAATTACTTGCTAATAAAAATCTTCCAGCTCCTTTCAATACTACTGATGAACTTAAAACTGCATTTGCTGCTCAAGGTCTCGACACTACTGATCTGGTTGCCCTCTCCGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGCCGATTGTACAACTTCAGCGGTACGGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTATTACTCTAATCTTCAAGTGAAAAAAGGTTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTTCAGATACCATTAGCATTGTCAACAAATTCGCAACCGATCAAAAAGCTTTTTTTGAGAGCTTTAGGGCTGCTATGATCAAAATGGGAAATATTGGTGTGTTAACCGGGAACCAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCAGCAGAACTTGGTCTTATCAATGTTGCCTCAGCAGATTCATCTGAGGAGGGTATGGTTAGCTCAATGTAA

Protein sequence

>Msa0291150

MNSLRAVAIALCCIVVVLGGLPFSSNAQLDPSFYRNTCPNVSSIVREVIRSVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVVSEQDAFPNRNSLRGLDVVNQIKTAVEKACPNTVSCADILALSAELSSTLADGPDWKVPLGRRDGLTANQLLANKNLPAPFNTTDELKTAFAAQGLDTTDLVALSGAHTFGRAHCSLFVSRLYNFSGTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGSDTISIVNKFATDQKAFFESFRAAMIKMGNIGVLTGNQGEIRKQCNFVNSKSAELGLINVASADSSEEGMVSSM*