AlfalfaGEDB | Msa0981670

M. sativa cultivar zhongmu-4 / Msa0981670

KEGG: K00430
GO: GO:0000902 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016684 GO:0030312 GO:0031090 GO:0031347 GO:0031349 GO:0032502 GO:0032989 GO:0035821 GO:0040007 GO:0040008 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045926 GO:0048046 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0055114 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0071944 GO:0072593 GO:0075136 GO:0080134 GO:0097237 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0981670	CAA62226.1	98.873	355	4	0	1	355	1	355	0.0	723

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0981670	sp\|Q9LEH3\|PER15_IPOBA	63.696	303	109	1	25	326	21	323	2.04e-136	394

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0981670	Q43790	98.873	355	4	0	1	355	1	355	0.0	723

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0013270	Msa0981670	0.802488	5.477292e-49	-8.615850e-47
Msa0035730	Msa0981670	0.808712	2.706158e-50	-8.615850e-47
Msa0039750	Msa0981670	0.837099	6.345955e-57	-8.615850e-47
Msa0040860	Msa0981670	-0.810235	1.274904e-50	-8.615850e-47
Msa0046970	Msa0981670	0.836339	9.917088e-57	-8.615850e-47
Msa0606150	Msa0981670	0.819912	9.053364e-53	-8.615850e-47
Msa0608820	Msa0981670	0.844188	8.827029e-59	-8.615850e-47
Msa0653340	Msa0981670	0.810377	1.187886e-50	-8.615850e-47
Msa0659020	Msa0981670	-0.815646	8.310748e-52	-8.615850e-47
Msa0689830	Msa0981670	0.811610	6.424076e-51	-8.615850e-47
Msa0691610	Msa0981670	0.836619	8.413144e-57	-8.615850e-47
Msa0695760	Msa0981670	0.828064	1.106455e-54	-8.615850e-47
Msa0704690	Msa0981670	0.829918	3.933969e-55	-8.615850e-47
Msa0707360	Msa0981670	0.808919	2.444471e-50	-8.615850e-47
Msa0721930	Msa0981670	0.832633	8.455658e-56	-8.615850e-47
Msa0732970	Msa0981670	0.812638	3.833180e-51	-8.615850e-47
Msa0741040	Msa0981670	0.808136	3.592218e-50	-8.615850e-47
Msa0746650	Msa0981670	0.837963	3.810620e-57	-8.615850e-47
Msa0761830	Msa0981670	0.809390	1.937521e-50	-8.615850e-47
Msa0762930	Msa0981670	0.833958	3.953567e-56	-8.615850e-47
Msa0773960	Msa0981670	0.828934	6.820005e-55	-8.615850e-47
Msa0775660	Msa0981670	0.801622	8.255794e-49	-8.615850e-47
Msa0802950	Msa0981670	-0.823287	1.502445e-53	-8.615850e-47
Msa0805390	Msa0981670	0.800934	1.141667e-48	-8.615850e-47
Msa0132080	Msa0981670	-0.803743	3.014004e-49	-8.615850e-47
Msa0180100	Msa0981670	-0.804589	2.009126e-49	-8.615850e-47
Msa0192050	Msa0981670	0.805437	1.335800e-49	-8.615850e-47
Msa0195230	Msa0981670	0.851619	7.887610e-61	-8.615850e-47
Msa0195260	Msa0981670	0.852975	3.243729e-61	-8.615850e-47
Msa0225070	Msa0981670	-0.817788	2.749608e-52	-8.615850e-47
Msa0234170	Msa0981670	0.992014	8.227569e-191	-8.615850e-47
Msa0368640	Msa0981670	0.830820	2.368175e-55	-8.615850e-47
Msa0384590	Msa0981670	0.801219	9.983845e-49	-8.615850e-47
Msa0386880	Msa0981670	0.802862	4.586142e-49	-8.615850e-47
Msa0388210	Msa0981670	0.804624	1.975374e-49	-8.615850e-47
Msa0402770	Msa0981670	0.825089	5.668230e-54	-8.615850e-47
Msa0456450	Msa0981670	-0.803676	3.112124e-49	-8.615850e-47
Msa0457070	Msa0981670	-0.812293	4.560609e-51	-8.615850e-47
Msa0480280	Msa0981670	0.806200	9.233680e-50	-8.615850e-47
Msa0981670	Msa0982730	0.847641	1.016971e-59	-8.615850e-47
Msa0981670	Msa0998660	-0.800853	1.185776e-48	-8.615850e-47
Msa0981670	Msa1025440	-0.802971	4.354688e-49	-8.615850e-47
Msa0981670	Msa1052000	0.801736	7.821120e-49	-8.615850e-47
Msa0981670	Msa1124210	0.804247	2.366939e-49	-8.615850e-47
Msa0981670	Msa1132850	0.816954	4.236143e-52	-8.615850e-47
Msa0981670	Msa1146980	0.810374	1.190119e-50	-8.615850e-47
Msa0981670	Msa1184680	0.806031	1.002086e-49	-8.615850e-47
Msa0981670	Msa1190770	0.816300	5.936629e-52	-8.615850e-47
Msa0981670	Msa1191530	-0.801740	7.806755e-49	-8.615850e-47
Msa0981670	Msa1197720	0.835359	1.756918e-56	-8.615850e-47
Msa0981670	Msa1205270	-0.835274	1.845570e-56	-8.615850e-47
Msa0981670	Msa1228600	-0.803306	3.713292e-49	-8.615850e-47
Msa0981670	Msa1251410	0.835394	1.721503e-56	-8.615850e-47
Msa0981670	Msa1266120	-0.807479	4.953386e-50	-8.615850e-47
Msa0981670	Msa1297220	-0.823937	1.058524e-53	-8.615850e-47
Msa0981670	Msa1306250	0.805764	1.140314e-49	-8.615850e-47
Msa0981670	Msa1323260	-0.815255	1.015106e-51	-8.615850e-47
Msa0981670	Msa1342360	-0.802709	4.932336e-49	-8.615850e-47
Msa0981670	Msa1343450	-0.828900	6.950536e-55	-8.615850e-47
Msa0981670	Msa1347390	0.834826	2.393895e-56	-8.615850e-47
Msa0981670	Msa1396100	0.814765	1.303856e-51	-8.615850e-47
Msa0981670	Msa1458790	0.801709	7.920889e-49	-8.615850e-47
Msa0981670	Msa1462780	0.824731	6.884179e-54	-8.615850e-47
Msa0240540	Msa0981670	0.807032	6.162914e-50	-8.615850e-47
Msa0266140	Msa0981670	-0.803172	3.957258e-49	-8.615850e-47
Msa0267450	Msa0981670	-0.811235	7.748068e-51	-8.615850e-47
Msa0267510	Msa0981670	-0.810186	1.306375e-50	-8.615850e-47
Msa0279000	Msa0981670	0.842673	2.239408e-58	-8.615850e-47
Msa0290800	Msa0981670	0.804491	2.105926e-49	-8.615850e-47
Msa0291150	Msa0981670	0.918805	9.897650e-87	-8.615850e-47
Msa0298400	Msa0981670	0.810791	9.671299e-51	-8.615850e-47
Msa0304060	Msa0981670	-0.806957	6.391829e-50	-8.615850e-47
Msa0307430	Msa0981670	0.830424	2.959628e-55	-8.615850e-47
Msa0328870	Msa0981670	0.806563	7.743025e-50	-8.615850e-47
Msa0506750	Msa0981670	0.819770	9.752150e-53	-8.615850e-47
Msa0528310	Msa0981670	0.820528	6.542078e-53	-8.615850e-47
Msa0538050	Msa0981670	-0.800054	1.725587e-48	-8.615850e-47
Msa0555280	Msa0981670	0.822991	1.761415e-53	-8.615850e-47
Msa0579080	Msa0981670	0.818446	1.952479e-52	-8.615850e-47
Msa0588500	Msa0981670	0.801467	8.880428e-49	-8.615850e-47
Msa0601380	Msa0981670	0.801031	1.090744e-48	-8.615850e-47
Msa0857270	Msa0981670	0.800585	1.345428e-48	-8.615850e-47
Msa0900830	Msa0981670	0.808142	3.582012e-50	-8.615850e-47
Msa0930770	Msa0981670	0.820949	5.233208e-53	-8.615850e-47
Msa0967900	Msa0981670	-0.812387	4.350749e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0981670	MtrunA17_Chr2g0292241	96.901	355	11	0	1	355	1	355	0.0	712
Msa0981670	MtrunA17_Chr2g0292211	88.451	355	38	1	1	355	12	363	0.0	648
Msa0981670	MtrunA17_Chr2g0292181	83.380	355	57	1	1	355	10	362	0.0	612
Msa0981670	MtrunA17_Chr2g0292251	82.583	333	57	1	22	353	21	353	0.0	570
Msa0981670	MtrunA17_Chr2g0291751	70.986	355	103	0	1	355	1	355	0.0	529
Msa0981670	MtrunA17_Chr2g0292261	73.239	355	90	3	1	354	1	351	0.0	527
Msa0981670	MtrunA17_Chr2g0292111	71.549	355	101	0	1	355	1	355	0.0	524
Msa0981670	MtrunA17_Chr2g0292151	69.859	355	106	1	1	355	1	354	0.0	511
Msa0981670	MtrunA17_Chr2g0292271	71.989	357	94	5	1	355	1	353	0.0	511
Msa0981670	MtrunA17_Chr2g0292291	67.514	354	110	2	3	355	4	353	2.30e-176	493
Msa0981670	MtrunA17_Chr2g0292091	63.380	355	119	2	1	355	1	344	3.39e-164	462
Msa0981670	MtrunA17_Chr2g0292101	64.045	356	116	3	1	355	1	345	2.36e-163	460
Msa0981670	MtrunA17_Chr7g0258811	60.586	307	120	1	25	330	65	371	6.86e-134	386
Msa0981670	MtrunA17_Chr1g0175561	59.164	311	126	1	21	330	16	326	3.12e-133	383
Msa0981670	MtrunA17_Chr5g0404721	52.805	303	142	1	29	331	30	331	9.52e-110	323
Msa0981670	MtrunA17_Chr8g0372601	50.495	303	149	1	29	331	30	331	1.10e-107	318
Msa0981670	MtrunA17_Chr4g0070951	50.938	320	153	2	14	331	13	330	7.05e-107	316
Msa0981670	MtrunA17_Chr5g0402581	51.148	305	145	3	27	330	25	326	4.67e-104	309
Msa0981670	MtrunA17_Chr2g0299691	49.837	307	149	2	28	331	55	359	5.72e-104	310
Msa0981670	MtrunA17_Chr5g0402571	49.673	306	148	4	27	330	25	326	2.33e-101	302
Msa0981670	MtrunA17_Chr1g0155611	49.007	302	154	0	29	330	46	347	6.38e-99	296
Msa0981670	MtrunA17_Chr3g0129051	47.222	324	156	4	5	326	8	318	6.46e-96	288
Msa0981670	MtrunA17_Chr2g0320071	45.231	325	169	2	6	330	2	317	8.13e-96	287
Msa0981670	MtrunA17_Chr4g0013201	48.387	310	151	2	21	330	38	338	1.46e-95	287
Msa0981670	MtrunA17_Chr2g0292281	61.373	233	76	3	122	354	18	236	1.69e-94	281
Msa0981670	MtrunA17_Chr3g0129061	47.256	328	158	4	1	326	4	318	2.30e-94	284
Msa0981670	MtrunA17_Chr2g0320031	48.852	305	148	2	26	330	23	319	3.56e-94	283
Msa0981670	MtrunA17_Chr3g0106921	46.769	325	157	5	9	330	9	320	1.46e-93	282
Msa0981670	MtrunA17_Chr4g0024121	44.892	323	170	4	9	330	11	326	2.15e-93	281
Msa0981670	MtrunA17_Chr4g0013171	47.950	317	154	4	16	330	14	321	2.49e-93	281
Msa0981670	MtrunA17_Chr7g0244461	44.753	324	162	3	7	330	6	312	2.50e-93	281
Msa0981670	MtrunA17_Chr5g0432441	47.112	329	159	5	7	330	8	326	9.33e-93	280
Msa0981670	MtrunA17_Chr4g0043391	47.649	319	157	3	15	330	13	324	9.34e-93	280
Msa0981670	MtrunA17_Chr5g0438021	45.062	324	166	4	9	330	12	325	2.89e-92	278
Msa0981670	MtrunA17_Chr2g0322861	45.912	318	166	5	15	330	73	386	2.96e-92	281
Msa0981670	MtrunA17_Chr4g0013191	49.675	308	143	5	26	330	42	340	5.29e-92	278
Msa0981670	MtrunA17_Chr4g0038171	46.708	319	160	3	15	330	10	321	6.46e-92	278
Msa0981670	MtrunA17_Chr3g0114451	47.525	303	150	2	28	330	25	318	7.06e-92	277
Msa0981670	MtrunA17_Chr2g0320061	45.541	314	163	2	17	330	13	318	1.08e-91	277
Msa0981670	MtrunA17_Chr2g0320091	46.835	316	156	5	17	330	13	318	1.24e-91	277
Msa0981670	MtrunA17_Chr3g0129041	46.988	332	161	4	1	330	4	322	1.35e-91	277
Msa0981670	MtrunA17_Chr2g0320101	45.223	314	163	2	17	330	13	317	2.83e-91	276
Msa0981670	MtrunA17_Chr2g0320051	45.860	314	162	2	17	330	13	318	5.26e-91	275
Msa0981670	MtrunA17_Chr4g0038161	46.082	319	158	4	15	330	13	320	4.09e-90	273
Msa0981670	MtrunA17_Chr4g0038151	45.768	319	160	4	15	330	13	321	6.17e-90	273
Msa0981670	MtrunA17_Chr4g0013181	47.841	301	146	4	32	330	62	353	1.14e-89	273
Msa0981670	MtrunA17_Chr4g0068621	45.875	303	159	3	29	330	38	336	2.46e-89	271
Msa0981670	MtrunA17_Chr7g0244451	46.349	315	160	2	16	330	11	316	5.35e-88	267
Msa0981670	MtrunA17_Chr5g0400331	46.865	303	157	2	32	330	29	331	7.05e-88	268
Msa0981670	MtrunA17_Chr7g0268501	44.062	320	173	4	11	330	7	320	1.98e-87	266
Msa0981670	MtrunA17_Chr7g0268521	44.062	320	173	4	11	330	7	320	1.98e-87	266
Msa0981670	MtrunA17_Chr3g0106901	45.397	315	163	2	16	330	18	323	4.40e-87	265
Msa0981670	MtrunA17_Chr4g0063671	44.099	322	165	7	15	330	8	320	6.60e-87	265
Msa0981670	MtrunA17_Chr5g0432341	44.308	325	170	4	9	330	5	321	1.03e-86	264
Msa0981670	MtrunA17_Chr5g0432351	44.828	319	165	4	15	330	11	321	1.71e-86	264
Msa0981670	MtrunA17_Chr1g0213061	42.368	321	174	4	13	331	11	322	6.42e-86	263
Msa0981670	MtrunA17_Chr5g0432331	44.923	325	168	4	9	330	36	352	7.19e-86	263
Msa0981670	MtrunA17_Chr3g0128061	42.633	319	180	2	14	331	11	327	7.38e-85	259
Msa0981670	MtrunA17_Chr4g0013821	41.987	312	176	3	25	336	24	330	7.44e-85	260
Msa0981670	MtrunA17_Chr2g0279041	45.033	302	155	5	33	330	31	325	2.52e-84	258
Msa0981670	MtrunA17_Chr4g0013721	43.087	311	172	3	24	334	95	400	7.29e-84	260
Msa0981670	MtrunA17_Chr4g0076211	45.302	298	152	6	34	330	46	333	2.28e-83	256
Msa0981670	MtrunA17_Chr3g0107881	44.688	320	167	3	14	330	12	324	5.60e-82	252
Msa0981670	MtrunA17_Chr6g0467121	47.541	305	142	8	29	330	74	363	1.44e-81	253
Msa0981670	MtrunA17_Chr7g0254201	42.157	306	168	5	27	332	18	314	2.64e-81	250
Msa0981670	MtrunA17_Chr5g0421411	45.230	283	144	6	56	331	8	286	4.27e-80	246
Msa0981670	MtrunA17_Chr6g0467161	43.902	328	160	7	16	332	24	338	5.19e-80	248
Msa0981670	MtrunA17_Chr5g0401431	41.441	333	186	5	1	329	1	328	1.54e-79	246
Msa0981670	MtrunA17_Chr1g0148021	45.277	307	160	5	28	330	26	328	8.90e-79	244
Msa0981670	MtrunA17_Chr4g0046131	43.607	305	165	5	28	327	41	343	3.26e-78	243
Msa0981670	MtrunA17_Chr7g0224371	40.803	299	167	3	33	331	35	323	1.06e-77	241
Msa0981670	MtrunA17_Chr6g0467251	43.408	311	163	6	29	337	36	335	2.01e-77	241
Msa0981670	MtrunA17_Chr5g0405991	40.184	326	183	8	6	330	2	316	2.23e-77	240
Msa0981670	MtrunA17_Chr2g0296621	43.522	301	158	6	32	331	53	342	2.35e-77	241
Msa0981670	MtrunA17_Chr1g0204011	42.484	306	170	4	25	330	23	322	2.36e-77	240
Msa0981670	MtrunA17_Chr1g0194271	40.299	335	187	4	7	330	8	340	7.72e-77	239
Msa0981670	MtrunA17_Chr1g0194151	39.697	330	189	4	7	330	8	333	1.75e-76	238
Msa0981670	MtrunA17_Chr1g0164891	43.046	302	166	4	33	330	93	392	2.22e-76	240
Msa0981670	MtrunA17_Chr4g0072091	45.215	303	156	5	28	326	23	319	3.95e-76	237
Msa0981670	MtrunA17_Chr8g0371381	40.717	307	174	5	24	330	21	319	2.15e-75	235
Msa0981670	MtrunA17_Chr4g0075241	40.000	325	187	5	9	330	8	327	9.46e-75	234
Msa0981670	MtrunA17_Chr4g0053871	42.508	327	174	6	5	326	3	320	2.81e-74	233
Msa0981670	MtrunA17_Chr6g0460711	39.815	324	178	8	11	330	4	314	1.25e-72	228
Msa0981670	MtrunA17_Chr1g0197411	40.549	328	185	6	9	330	7	330	1.44e-71	226
Msa0981670	MtrunA17_Chr7g0225221	40.181	331	186	5	1	330	1	320	1.80e-71	225
Msa0981670	MtrunA17_Chr1g0157051	39.198	324	189	5	6	329	2	317	2.36e-71	225
Msa0981670	MtrunA17_Chr1g0188431	38.323	334	189	7	1	330	7	327	2.74e-71	225
Msa0981670	MtrunA17_Chr2g0329641	39.228	311	171	6	28	330	35	335	7.69e-70	221
Msa0981670	MtrunA17_Chr6g0477071	37.003	327	187	6	4	330	35	342	3.79e-69	220
Msa0981670	MtrunA17_Chr7g0254231	39.935	308	167	7	27	331	20	312	1.32e-68	218
Msa0981670	MtrunA17_Chr2g0278671	40.193	311	174	6	25	330	20	323	1.78e-68	218
Msa0981670	MtrunA17_Chr2g0279061	45.038	262	133	5	73	330	12	266	2.85e-67	213
Msa0981670	MtrunA17_Chr5g0432401	38.554	332	154	4	1	329	1	285	3.95e-65	207
Msa0981670	MtrunA17_Chr8g0364291	37.580	314	188	4	25	334	19	328	1.15e-64	208
Msa0981670	MtrunA17_Chr5g0413051	38.462	312	179	7	27	330	71	377	1.15e-63	207
Msa0981670	MtrunA17_Chr2g0316481	35.897	351	184	8	14	326	55	402	9.07e-63	205
Msa0981670	MtrunA17_Chr2g0316791	35.795	352	185	8	14	327	55	403	9.99e-63	205
Msa0981670	MtrunA17_Chr3g0136751	39.355	310	178	4	24	330	20	322	2.17e-62	202
Msa0981670	MtrunA17_Chr6g0451571	39.228	311	178	7	25	330	30	334	3.92e-62	201
Msa0981670	MtrunA17_Chr2g0316831	35.613	351	185	8	14	326	91	438	1.66e-61	203
Msa0981670	MtrunA17_Chr1g0181511	38.511	309	177	5	27	331	25	324	3.02e-61	199
Msa0981670	MtrunA17_Chr2g0316191	35.127	353	187	8	14	327	55	404	6.89e-61	201
Msa0981670	MtrunA17_Chr2g0311251	36.202	337	179	7	27	331	9	341	3.31e-59	194
Msa0981670	MtrunA17_Chr1g0181431	37.338	308	182	4	27	331	25	324	9.22e-59	192
Msa0981670	MtrunA17_Chr1g0181481	37.987	308	180	4	27	331	25	324	1.38e-58	192
Msa0981670	MtrunA17_Chr4g0074851	37.013	308	181	5	32	335	35	333	1.52e-58	192
Msa0981670	MtrunA17_Chr2g0311241	32.108	408	186	10	3	331	36	431	1.28e-55	187
Msa0981670	MtrunA17_Chr4g0004591	32.099	324	158	4	26	329	74	355	1.19e-48	167
Msa0981670	MtrunA17_Chr3g0114461	45.263	190	96	2	141	330	11	192	1.28e-46	157
Msa0981670	MtrunA17_Chr2g0316811	35.628	247	135	4	14	237	29	274	1.08e-42	151
Msa0981670	MtrunA17_Chr3g0114491	55.238	105	47	0	28	132	17	121	1.37e-34	124
Msa0981670	MtrunA17_Chr2g0316141	33.333	291	139	10	75	331	11	280	5.95e-34	126
Msa0981670	MtrunA17_Chr2g0316181	33.333	291	139	10	75	331	11	280	5.95e-34	126
Msa0981670	MtrunA17_Chr1g0181501	35.385	195	111	5	142	331	6	190	5.52e-27	105
Msa0981670	MtrunA17_Chr3g0104101	40.411	146	76	6	193	331	9	150	6.99e-24	95.9
Msa0981670	MtrunA17_Chr5g0432321	40.323	124	66	2	150	273	17	132	7.78e-21	87.0
Msa0981670	MtrunA17_Chr1g0181491	40.870	115	66	2	18	132	1	113	1.33e-20	87.0
Msa0981670	MtrunA17_Chr6g0468731	54.930	71	28	2	68	138	22	88	1.90e-17	76.6
Msa0981670	MtrunA17_Chr7g0254181	37.600	125	73	3	72	195	2	122	2.96e-17	78.2
Msa0981670	MtrunA17_Chr5g0432361	42.529	87	49	1	243	329	23	108	6.51e-16	72.8
Msa0981670	MtrunA17_Chr1g0196191	54.930	71	29	2	63	133	21	88	2.34e-14	70.1
Msa0981670	MtrunA17_Chr7g0268491	41.414	99	54	3	232	330	3	97	7.86e-14	66.6
Msa0981670	MtrunA17_Chr3g0137751	26.471	272	152	8	44	314	91	315	2.09e-13	70.1
Msa0981670	MtrunA17_Chr4g0013811	43.056	72	41	0	141	212	7	78	1.72e-12	62.4
Msa0981670	MtrunA17_Chr5g0423911	47.059	68	34	1	259	326	2	67	8.36e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0981670	AT5G06730.1	55.723	332	145	1	14	343	18	349	1.26e-132	383
Msa0981670	AT5G06720.1	56.467	317	138	0	14	330	17	333	1.27e-131	379
Msa0981670	AT2G38380.1	54.955	333	140	3	24	355	26	349	3.25e-127	369
Msa0981670	AT2G38390.1	53.453	333	145	3	24	355	26	349	9.98e-126	365
Msa0981670	AT3G49120.1	54.277	339	150	3	14	347	14	352	2.85e-124	362
Msa0981670	AT3G32980.1	55.692	325	142	2	25	347	27	351	1.27e-123	360
Msa0981670	AT3G49110.1	55.077	325	144	2	25	347	29	353	8.16e-121	353
Msa0981670	AT4G08770.1	54.688	320	143	2	25	342	20	339	1.65e-120	352
Msa0981670	AT4G08780.1	53.125	320	148	2	25	342	20	339	8.64e-117	342
Msa0981670	AT5G19880.1	52.751	309	143	2	25	330	21	329	1.23e-112	331
Msa0981670	AT2G18140.1	51.656	302	145	1	29	330	35	335	6.08e-108	319
Msa0981670	AT2G18150.1	51.316	304	147	1	27	330	34	336	8.43e-108	319
Msa0981670	AT4G36430.1	51.623	308	148	1	24	331	25	331	7.92e-107	316
Msa0981670	AT5G66390.1	49.675	308	154	1	23	330	27	333	3.64e-106	315
Msa0981670	AT5G19890.1	51.792	307	140	4	27	331	28	328	3.25e-104	310
Msa0981670	AT3G50990.1	49.837	307	153	1	24	330	36	341	1.98e-102	305
Msa0981670	AT1G44970.1	49.351	308	154	1	23	330	41	346	1.65e-100	301
Msa0981670	AT1G14550.1	48.366	306	150	3	26	330	23	321	2.17e-97	292
Msa0981670	AT5G05340.1	46.815	314	156	3	19	330	20	324	4.70e-96	288
Msa0981670	AT4G16270.1	47.855	303	153	4	29	330	50	348	7.28e-94	284
Msa0981670	AT1G14540.1	46.584	322	165	3	9	330	1	315	1.40e-93	282
Msa0981670	AT1G49570.1	45.902	305	160	3	27	328	46	348	2.61e-92	280
Msa0981670	AT1G68850.1	46.382	304	157	5	33	331	34	336	3.77e-91	276
Msa0981670	AT1G05260.1	42.216	334	182	7	1	331	1	326	9.65e-87	265
Msa0981670	AT2G41480.1	44.037	327	169	6	9	330	11	328	5.46e-86	263
Msa0981670	AT4G11290.1	41.846	325	184	4	8	330	5	326	3.49e-85	261
Msa0981670	AT1G71695.1	46.104	308	154	6	29	333	44	342	5.56e-85	261
Msa0981670	AT5G58390.1	45.570	316	160	5	14	326	6	312	1.46e-84	259
Msa0981670	AT2G35380.1	47.351	302	155	3	33	330	34	335	1.60e-84	259
Msa0981670	AT5G58400.1	44.343	327	167	5	3	326	7	321	1.64e-84	259
Msa0981670	AT3G03670.1	43.092	304	170	2	27	330	21	321	4.83e-84	258
Msa0981670	AT2G22420.1	42.025	326	177	4	15	340	16	329	2.00e-83	256
Msa0981670	AT2G18980.1	45.652	322	162	6	15	330	9	323	1.20e-82	254
Msa0981670	AT5G15180.1	42.581	310	167	6	25	330	27	329	4.97e-82	253
Msa0981670	AT3G21770.1	42.342	333	186	5	1	331	1	329	1.10e-81	252
Msa0981670	AT5G14130.1	43.711	318	170	5	18	330	17	330	2.21e-81	251
Msa0981670	AT5G64120.1	43.960	298	159	5	33	330	39	328	2.58e-81	251
Msa0981670	AT4G30170.1	44.984	309	159	5	26	330	24	325	2.74e-81	251
Msa0981670	AT3G01190.1	42.105	323	178	7	9	330	7	321	3.07e-81	251
Msa0981670	AT5G14130.2	43.711	318	170	5	18	330	58	371	5.68e-81	251
Msa0981670	AT1G05240.1	44.156	308	158	5	29	330	26	325	1.53e-80	249
Msa0981670	AT1G05250.1	44.156	308	158	5	29	330	26	325	1.53e-80	249
Msa0981670	AT5G67400.1	42.331	326	181	4	9	330	7	329	2.53e-79	246
Msa0981670	AT5G51890.1	43.322	307	167	5	25	330	22	322	2.82e-79	246
Msa0981670	AT5G17820.1	41.447	304	166	5	27	330	22	313	5.20e-79	244
Msa0981670	AT4G37530.1	43.366	309	170	3	25	330	23	329	5.51e-79	245
Msa0981670	AT5G17820.2	41.447	304	166	5	27	330	75	366	8.69e-78	243
Msa0981670	AT4G25980.1	41.284	327	177	6	9	330	10	326	2.44e-77	241
Msa0981670	AT5G39580.1	41.265	332	177	8	1	330	4	319	7.28e-77	239
Msa0981670	AT3G49960.1	42.025	326	179	5	9	330	10	329	1.01e-76	239
Msa0981670	AT4G37520.1	41.042	307	176	3	27	330	25	329	6.28e-74	232
Msa0981670	AT5G64110.1	44.371	302	155	7	33	330	38	330	1.02e-73	232
Msa0981670	AT4G37520.2	40.717	307	174	4	27	330	25	326	2.38e-72	228
Msa0981670	AT5G64100.1	42.193	301	161	7	33	330	41	331	2.94e-72	228
Msa0981670	AT2G39040.1	42.444	311	168	7	27	330	44	350	6.22e-72	228
Msa0981670	AT4G33420.1	38.226	327	188	7	4	330	13	325	8.54e-71	224
Msa0981670	AT4G33420.2	38.226	327	188	7	4	330	60	372	3.48e-70	224
Msa0981670	AT5G42180.1	39.628	323	185	7	8	329	3	316	4.90e-70	222
Msa0981670	AT2G34060.1	39.935	308	176	6	26	327	39	343	7.19e-69	220
Msa0981670	AT2G24800.1	40.909	308	171	5	27	330	29	329	1.44e-68	218
Msa0981670	AT5G24070.1	38.757	338	186	8	4	331	10	336	6.32e-68	217
Msa0981670	AT4G37530.2	44.747	257	139	2	25	278	23	279	1.00e-67	214
Msa0981670	AT4G33870.1	35.629	334	169	6	33	327	72	398	2.04e-67	218
Msa0981670	AT1G77100.1	39.514	329	183	7	7	330	2	319	3.63e-67	214
Msa0981670	AT4G31760.1	38.387	310	183	3	23	330	23	326	5.82e-67	214
Msa0981670	AT4G17690.1	39.216	306	175	5	29	331	26	323	5.76e-66	211
Msa0981670	AT5G40150.1	39.423	312	180	4	21	330	24	328	2.19e-65	210
Msa0981670	AT5G47000.1	37.730	326	192	6	9	331	14	331	3.29e-65	210
Msa0981670	AT1G24110.1	38.037	326	193	6	8	330	3	322	5.16e-65	209
Msa0981670	AT2G43480.1	38.608	316	173	8	25	330	31	335	1.26e-64	208
Msa0981670	AT4G26010.1	40.193	311	164	8	24	330	17	309	1.43e-64	207
Msa0981670	AT4G26010.2	40.193	311	164	8	24	330	45	337	1.99e-64	208
Msa0981670	AT3G28200.1	37.540	309	183	4	24	330	16	316	6.80e-63	203
Msa0981670	AT1G30870.1	38.816	304	173	6	33	333	55	348	2.49e-62	203
Msa0981670	AT5G22410.1	37.338	308	173	8	27	326	26	321	5.60e-62	201
Msa0981670	AT2G35380.2	45.344	247	131	3	88	330	1	247	1.95e-60	195
Msa0981670	AT4G21960.1	37.829	304	176	5	32	331	34	328	2.90e-60	197
Msa0981670	AT1G34510.1	39.414	307	168	8	27	331	20	310	3.70e-60	196
Msa0981670	AT3G17070.1	37.838	333	188	10	7	330	17	339	4.20e-58	192
Msa0981670	AT2G37130.1	36.570	309	184	5	26	330	27	327	9.83e-56	185
Msa0981670	AT2G37130.2	36.634	303	180	5	32	330	2	296	2.63e-54	181
Msa0981670	AT4G25980.2	41.202	233	124	5	9	236	55	279	8.91e-50	168
Msa0981670	AT5G39580.2	42.157	204	104	5	1	203	4	194	4.64e-41	144
Msa0981670	AT3G17070.2	37.546	269	149	10	71	330	18	276	5.60e-41	145
Msa0981670	AT2G24800.2	42.442	172	95	1	27	198	29	196	4.27e-37	134
Msa0981670	AT1G77490.2	28.137	263	151	9	63	314	106	341	2.44e-15	77.0
Msa0981670	AT1G77490.1	28.137	263	151	9	63	314	106	341	2.61e-15	77.0
Msa0981670	AT3G09640.2	25.352	213	117	5	103	313	74	246	4.63e-13	68.9
Msa0981670	AT3G09640.1	25.352	213	117	5	103	313	74	246	4.63e-13	68.9
Msa0981670	AT3G42570.1	31.507	146	87	4	53	196	15	149	2.82e-11	61.6

Find 69 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCATTTGAAGTGTTTCTT+TGG	0.195427	6_4:+21189427	Msa0981670:three_prime_UTR
TGGACAAGTGTTCCTGTAAA+AGG	0.264524	6_4:-21186753	None:intergenic
TAGGGCTGCTATGATCAAAA+TGG	0.283772	6_4:+21189159	Msa0981670:CDS
TTCATTTGAAGTGTTTCTTT+GGG	0.295342	6_4:+21189428	Msa0981670:three_prime_UTR
GGAAATATTGGTGTGTTAAC+CGG	0.297989	6_4:+21189181	Msa0981670:CDS
AGGAGTTGTTGGATCGAAAT+TGG	0.299793	6_4:-21188987	None:intergenic
TCTAATCTCTCCTTGGTTCC+CGG	0.308228	6_4:-21189200	None:intergenic
CCTCTTAATGAGTTTCTGTT+TGG	0.310696	6_4:-21188311	None:intergenic
ATTTCAGGTGCTCATACATT+TGG	0.340486	6_4:+21188827	Msa0981670:intron
TAGTTCTTGTCAAATTTATC+AGG	0.341189	6_4:-21189007	None:intergenic
CAGAAACTCATTAAGAGGTT+TGG	0.342785	6_4:+21188316	Msa0981670:CDS
CGAACAATGGAACTAACATT+TGG	0.350033	6_4:-21186773	None:intergenic
CCAAACAGAAACTCATTAAG+AGG	0.372095	6_4:+21188311	Msa0981670:CDS
CCTGACTGGAAGGTTCCTTT+AGG	0.381585	6_4:+21188558	Msa0981670:CDS
CAAGAGTTGTTCTCAACATC+TGG	0.390230	6_4:+21189073	Msa0981670:CDS
ATGATCAAAATGGGAAATAT+TGG	0.401401	6_4:+21189169	Msa0981670:CDS
TGCTGTGTAGTGGTTGTGCT+TGG	0.416566	6_4:+21186692	Msa0981670:CDS
GCTATAACTATGCACATTCA+TGG	0.423896	6_4:+21189356	Msa0981670:three_prime_UTR
CCATTGTTCGTGAAGTCATA+AGG	0.434806	6_4:+21186786	Msa0981670:CDS
GAATTTGTTGACAATGCTAA+TGG	0.449121	6_4:-21189104	None:intergenic
CTCAATGTAAATGTAGTGAT+TGG	0.450297	6_4:+21189312	Msa0981670:exon
GTATGCTTGCTAGTCTTGTC+AGG	0.452656	6_4:+21186831	Msa0981670:CDS
AAACCATCTCTTCTTCCTAA+AGG	0.452959	6_4:-21188573	None:intergenic
TTGTACAACTTCAGCGGTAC+GGG	0.454738	6_4:+21188881	Msa0981670:CDS
TCAAATTTATCAGGAGTTGT+TGG	0.456888	6_4:-21188998	None:intergenic
AATCAAAACAGCTGTGGAAA+AGG	0.458727	6_4:+21188352	Msa0981670:CDS
AGGTCTCGATACTACTGATC+TGG	0.469058	6_4:+21188680	Msa0981670:CDS
TCAGCACAAGAAACTGTGTT+AGG	0.474603	6_4:-21188380	None:intergenic
AATTCAAAATCAGCAGAACT+TGG	0.476123	6_4:+21189241	Msa0981670:CDS
AAGTAAGTTGTGTTAAGAGT+TGG	0.480928	6_4:-21188914	None:intergenic
ACTGATCTGGTTGCACTCTC+CGG	0.486593	6_4:+21188693	Msa0981670:CDS
AATAGGCAGATGGTCCTGAC+TGG	0.492532	6_4:+21188544	Msa0981670:intron
AGATTCATCTGAGGAGGGTA+TGG	0.494872	6_4:+21189285	Msa0981670:CDS
CCTAAAGGAACCTTCCAGTC+AGG	0.502692	6_4:-21188558	None:intergenic
AGGGCTGCTATGATCAAAAT+GGG	0.502945	6_4:+21189160	Msa0981670:CDS
TTCGTGCCAGGTCCACCATT+GGG	0.506163	6_4:-21188959	None:intergenic
TCAGTAGTATTGAAAGGAGC+TGG	0.514353	6_4:-21188630	None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG	0.517053	6_4:-21188909	None:intergenic
GAAATATTGGTGTGTTAACC+GGG	0.517789	6_4:+21189182	Msa0981670:CDS
CCTTATGACTTCACGAACAA+TGG	0.525359	6_4:-21186786	None:intergenic
TTGTTGGATCGAAATTGGTA+AGG	0.530982	6_4:-21188982	None:intergenic
ATATGTCCCAATGGTGGACC+TGG	0.533119	6_4:+21188953	Msa0981670:CDS
TACCGCTGAAGTTGTACAAT+CGG	0.535831	6_4:-21188877	None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG	0.538902	6_4:-21186723	None:intergenic
GTTCGTGCCAGGTCCACCAT+TGG	0.546841	6_4:-21188960	None:intergenic
ATATAGTAAAATTAATGCTA+AGG	0.551122	6_4:-21189496	None:intergenic
AGTTCATCAGTAGTATTGAA+AGG	0.552774	6_4:-21188636	None:intergenic
AAAGCTGCATTTGCTGCTCA+AGG	0.555072	6_4:+21188660	Msa0981670:CDS
GTTGTGTTAAGAGTTGGATC+GGG	0.555195	6_4:-21188908	None:intergenic
AATAGCTTTGTGCTGTGTAG+TGG	0.557732	6_4:+21186682	Msa0981670:CDS
GGCAGATGGTCCTGACTGGA+AGG	0.562824	6_4:+21188548	Msa0981670:intron
ATTGTACAACTTCAGCGGTA+CGG	0.567546	6_4:+21188880	Msa0981670:CDS
CTCAGCAGATTCATCTGAGG+AGG	0.567597	6_4:+21189279	Msa0981670:CDS
AGTTGTGCATTTGAAGAGAA+GGG	0.569161	6_4:-21186722	None:intergenic
CAAGTGTTCCTGTAAAAGGA+TGG	0.579502	6_4:-21186749	None:intergenic
GTTCCTTTAGGAAGAAGAGA+TGG	0.584332	6_4:+21188570	Msa0981670:CDS
AAATTGGTAAGGTTCGTGCC+AGG	0.584556	6_4:-21188971	None:intergenic
CGCACAATATGTCCCAATGG+TGG	0.600150	6_4:+21188947	Msa0981670:CDS
TGCTGAATTATCATCTACAC+TGG	0.600987	6_4:+21188418	Msa0981670:CDS
GAATCAAATCAAAACAGCTG+TGG	0.608984	6_4:+21188346	Msa0981670:CDS
GATGAAATAAAATAGGCAGA+TGG	0.618837	6_4:+21188534	Msa0981670:intron
AGCCGATTGTACAACTTCAG+CGG	0.631715	6_4:+21188875	Msa0981670:CDS
AGCATCTTGTTCACTCACAA+CGG	0.632766	6_4:-21188285	None:intergenic
CTCCTCAGATGAATCTGCTG+AGG	0.635056	6_4:-21189278	None:intergenic
TTGCGCACAATATGTCCCAA+TGG	0.640051	6_4:+21188944	Msa0981670:CDS
GGTGTGTTAACCGGGAACCA+AGG	0.643371	6_4:+21189190	Msa0981670:CDS
TCAGCAGATTCATCTGAGGA+GGG	0.667386	6_4:+21189280	Msa0981670:CDS
ACAAGACTAGCAAGCATACG+AGG	0.681087	6_4:-21186827	None:intergenic
TGCCTCAGCAGATTCATCTG+AGG	0.692262	6_4:+21189276	Msa0981670:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTAAAAAAAATAAAATT+TGG	-	chr6_4:21187555-21187574	None:intergenic	0.0%
!!!	TTAATATTTTTTACTATTAG+TGG	-	chr6_4:21187126-21187145	None:intergenic	10.0%
!!!	TTTTATTTTAATTAAACAGA+AGG	-	chr6_4:21187379-21187398	None:intergenic	10.0%
!!	AAAATATATAGTATAGTTTG+AGG	-	chr6_4:21188454-21188473	None:intergenic	15.0%
!!	AATTGAATTTGAAAATTCAA+TGG	-	chr6_4:21188486-21188505	None:intergenic	15.0%
!!	TTTGTTTCAAAAATTCTAAT+TGG	+	chr6_4:21188736-21188755	Msa0981670:intron	15.0%
!!	ATATAGTAAAATTAATGCTA+AGG	-	chr6_4:21189499-21189518	None:intergenic	15.0%
!!	TCATACTACTATAAGATTAT+AGG	-	chr6_4:21186987-21187006	None:intergenic	20.0%
!!	TGTACTAATTCTACTTAAAT+GGG	-	chr6_4:21187014-21187033	None:intergenic	20.0%
!!	ATGTACTAATTCTACTTAAA+TGG	-	chr6_4:21187015-21187034	None:intergenic	20.0%
!!!	ATTTAACTTACTTAATAACC+CGG	+	chr6_4:21187182-21187201	Msa0981670:intron	20.0%
!!	AAAATGCATAAAAATATGCA+AGG	+	chr6_4:21187256-21187275	Msa0981670:intron	20.0%
!!!	ATGTGAAAAATAGCTTTTTT+TGG	-	chr6_4:21187307-21187326	None:intergenic	20.0%
!!!	CTATTTTTCACATATTTTGA+GGG	+	chr6_4:21187314-21187333	Msa0981670:intron	20.0%
!!	TGCTTAATATTTATAGCTTA+AGG	+	chr6_4:21187412-21187431	Msa0981670:intron	20.0%
!!!	TTAAGTTGTTCACATTTAAT+TGG	+	chr6_4:21187635-21187654	Msa0981670:intron	20.0%
!!	TTACTAAGTATGCAATAATT+TGG	-	chr6_4:21188027-21188046	None:intergenic	20.0%
!!	ATCTTTCAAAAAAGAAAGAT+TGG	-	chr6_4:21188097-21188116	None:intergenic	20.0%
!!!	TAACAGATTTTAAAACCTTT+TGG	-	chr6_4:21188134-21188153	None:intergenic	20.0%
!!	ATCTGTTATATAAAGTTATC+CGG	+	chr6_4:21188146-21188165	Msa0981670:intron	20.0%
!!!	GTTTTGTGATGAAATAAAAT+AGG	+	chr6_4:21188527-21188546	Msa0981670:intron	20.0%
!!!	GATTTTTATTAGCAAGTAAT+TGG	-	chr6_4:21188608-21188627	None:intergenic	20.0%
!!	ACTTAAAAAATGTTACATAC+CGG	-	chr6_4:21188715-21188734	None:intergenic	20.0%
!	TGAATGAATATGCAAAAACT+AGG	-	chr6_4:21186896-21186915	None:intergenic	25.0%
!	GATATAAATTCTTGACTTCT+TGG	+	chr6_4:21186957-21186976	Msa0981670:intron	25.0%
!!!	AAAATAGCTTTTTTTGGTAG+TGG	-	chr6_4:21187301-21187320	None:intergenic	25.0%
!!!	GCTATTTTTCACATATTTTG+AGG	+	chr6_4:21187313-21187332	Msa0981670:intron	25.0%
!	AAAAATCTCTCTTGGTAAAA+AGG	-	chr6_4:21187459-21187478	None:intergenic	25.0%
!	ACAACTTAAAATAAAGTGGA+CGG	-	chr6_4:21187624-21187643	None:intergenic	25.0%
!	GTGAACAACTTAAAATAAAG+TGG	-	chr6_4:21187628-21187647	None:intergenic	25.0%
!!!	TTTTTTTAACCAAGTTGCTT+GGG	-	chr6_4:21187924-21187943	None:intergenic	25.0%
!!!	TTTTTTTTAACCAAGTTGCT+TGG	-	chr6_4:21187925-21187944	None:intergenic	25.0%
!	TTGAAAGATAAAGTTATCCA+TGG	+	chr6_4:21188108-21188127	Msa0981670:intron	25.0%
!	TATATATGTTTCTCGATTTC+AGG	+	chr6_4:21188812-21188831	Msa0981670:intron	25.0%
!	TAGTTCTTGTCAAATTTATC+AGG	-	chr6_4:21189010-21189029	None:intergenic	25.0%
!	TCTAATCTTCAAGTGAAAAA+AGG	+	chr6_4:21189034-21189053	Msa0981670:CDS	25.0%
!!	CTCAAAAAAAGCTTTTTGAT+CGG	-	chr6_4:21189134-21189153	None:intergenic	25.0%
!	ATGATCAAAATGGGAAATAT+TGG	+	chr6_4:21189169-21189188	Msa0981670:CDS	25.0%
!!	TTTCATTTGAAGTGTTTCTT+TGG	+	chr6_4:21189427-21189446	Msa0981670:three_prime_UTR	25.0%
!!	TTCATTTGAAGTGTTTCTTT+GGG	+	chr6_4:21189428-21189447	Msa0981670:three_prime_UTR	25.0%
	CTATTAGTGGTAGAATGTAT+AGG	-	chr6_4:21187113-21187132	None:intergenic	30.0%
!!	TCATTTTTCCAACTCAAGTT+TGG	-	chr6_4:21187163-21187182	None:intergenic	30.0%
!!	AAAAATAGCTTTGATTCAGC+CGG	-	chr6_4:21187204-21187223	None:intergenic	30.0%
	TGAGTCAAAAAAATCTCTCT+TGG	-	chr6_4:21187467-21187486	None:intergenic	30.0%
	TCATTTAGAAGCAATAGAGT+TGG	+	chr6_4:21187484-21187503	Msa0981670:intron	30.0%
	ACTAGTAGTATTTCACGATA+TGG	+	chr6_4:21187525-21187544	Msa0981670:intron	30.0%
	ATTGGTATATCCGTATAAGA+CGG	+	chr6_4:21187653-21187672	Msa0981670:intron	30.0%
	TACTGACATGTTACATTCAA+TGG	-	chr6_4:21187703-21187722	None:intergenic	30.0%
!!!	ATTTTAAAACCTTTTGGCCA+TGG	-	chr6_4:21188128-21188147	None:intergenic	30.0%
	TGTTATATAAAGTTATCCGG+CGG	+	chr6_4:21188149-21188168	Msa0981670:intron	30.0%
	GATGAAATAAAATAGGCAGA+TGG	+	chr6_4:21188534-21188553	Msa0981670:intron	30.0%
!	AGTTCATCAGTAGTATTGAA+AGG	-	chr6_4:21188639-21188658	None:intergenic	30.0%
	AAGTAAGTTGTGTTAAGAGT+TGG	-	chr6_4:21188917-21188936	None:intergenic	30.0%
	TCAAATTTATCAGGAGTTGT+TGG	-	chr6_4:21189001-21189020	None:intergenic	30.0%
!!	GAATTTGTTGACAATGCTAA+TGG	-	chr6_4:21189107-21189126	None:intergenic	30.0%
!!!	AAGCTTTTTTTGAGAGCTTT+AGG	+	chr6_4:21189140-21189159	Msa0981670:CDS	30.0%
!!!	AGCTTTTTTTGAGAGCTTTA+GGG	+	chr6_4:21189141-21189160	Msa0981670:CDS	30.0%
!	ATTGTTTTCTAATCTCTCCT+TGG	-	chr6_4:21189210-21189229	None:intergenic	30.0%
	AATTCAAAATCAGCAGAACT+TGG	+	chr6_4:21189241-21189260	Msa0981670:CDS	30.0%
	CTCAATGTAAATGTAGTGAT+TGG	+	chr6_4:21189312-21189331	Msa0981670:exon	30.0%
!	CTTTGTGAGCAAAAATCTTT+TGG	+	chr6_4:21189403-21189422	Msa0981670:three_prime_UTR	30.0%
	AGTTGTGCATTTGAAGAGAA+GGG	-	chr6_4:21186725-21186744	None:intergenic	35.0%
	AAGTTGTGCATTTGAAGAGA+AGG	-	chr6_4:21186726-21186745	None:intergenic	35.0%
!	AACTTGATCCATCCTTTTAC+AGG	+	chr6_4:21186741-21186760	Msa0981670:CDS	35.0%
	CGAACAATGGAACTAACATT+TGG	-	chr6_4:21186776-21186795	None:intergenic	35.0%
	TATACCTACCAAACTTGAGT+TGG	+	chr6_4:21187152-21187171	Msa0981670:intron	35.0%
!	TTTTCCAACTCAAGTTTGGT+AGG	-	chr6_4:21187159-21187178	None:intergenic	35.0%
!!	AAAATAGCTTTGATTCAGCC+GGG	-	chr6_4:21187203-21187222	None:intergenic	35.0%
	GCATAAAAATATGCAAGGTC+CGG	+	chr6_4:21187261-21187280	Msa0981670:intron	35.0%
	CATAAAAATATGCAAGGTCC+GGG	+	chr6_4:21187262-21187281	Msa0981670:intron	35.0%
	CTTAAAATAAAGTGGACGGT+GGG	-	chr6_4:21187620-21187639	None:intergenic	35.0%
	ACTTAAAATAAAGTGGACGG+TGG	-	chr6_4:21187621-21187640	None:intergenic	35.0%
!!!	TTTTTTTCTTCCTTTCGCAC+CGG	+	chr6_4:21187776-21187795	Msa0981670:intron	35.0%
	TAAAGTTATCCATGGCCAAA+AGG	+	chr6_4:21188116-21188135	Msa0981670:intron	35.0%
	CCTCTTAATGAGTTTCTGTT+TGG	-	chr6_4:21188314-21188333	None:intergenic	35.0%
	CCAAACAGAAACTCATTAAG+AGG	+	chr6_4:21188311-21188330	Msa0981670:CDS	35.0%
	CAGAAACTCATTAAGAGGTT+TGG	+	chr6_4:21188316-21188335	Msa0981670:CDS	35.0%
	GAATCAAATCAAAACAGCTG+TGG	+	chr6_4:21188346-21188365	Msa0981670:CDS	35.0%
	AATCAAAACAGCTGTGGAAA+AGG	+	chr6_4:21188352-21188371	Msa0981670:CDS	35.0%
	TGCTGAATTATCATCTACAC+TGG	+	chr6_4:21188418-21188437	Msa0981670:CDS	35.0%
	AAACCATCTCTTCTTCCTAA+AGG	-	chr6_4:21188576-21188595	None:intergenic	35.0%
!	ATTTCAGGTGCTCATACATT+TGG	+	chr6_4:21188827-21188846	Msa0981670:intron	35.0%
	AGTTGTGTTAAGAGTTGGAT+CGG	-	chr6_4:21188912-21188931	None:intergenic	35.0%
	TTGTTGGATCGAAATTGGTA+AGG	-	chr6_4:21188985-21189004	None:intergenic	35.0%
	GGAAATATTGGTGTGTTAAC+CGG	+	chr6_4:21189181-21189200	Msa0981670:CDS	35.0%
	GAAATATTGGTGTGTTAACC+GGG	+	chr6_4:21189182-21189201	Msa0981670:CDS	35.0%
	GCTATAACTATGCACATTCA+TGG	+	chr6_4:21189356-21189375	Msa0981670:three_prime_UTR	35.0%
!!	AATAGCTTTGTGCTGTGTAG+TGG	+	chr6_4:21186682-21186701	Msa0981670:CDS	40.0%
	CAAGTGTTCCTGTAAAAGGA+TGG	-	chr6_4:21186752-21186771	None:intergenic	40.0%
	TGGACAAGTGTTCCTGTAAA+AGG	-	chr6_4:21186756-21186775	None:intergenic	40.0%
	CCTTATGACTTCACGAACAA+TGG	-	chr6_4:21186789-21186808	None:intergenic	40.0%
	CCATTGTTCGTGAAGTCATA+AGG	+	chr6_4:21186786-21186805	Msa0981670:CDS	40.0%
	CACGTACAATGAGCAAAACA+GGG	-	chr6_4:21186934-21186953	None:intergenic	40.0%
	ACACGTACAATGAGCAAAAC+AGG	-	chr6_4:21186935-21186954	None:intergenic	40.0%
!!	GAATGTATAGGAGCATCACA+AGG	-	chr6_4:21187101-21187120	None:intergenic	40.0%
!!!	TAGCTTTTTTTGGTAGTGGC+CGG	-	chr6_4:21187297-21187316	None:intergenic	40.0%
	AAAACTCAGTATCCGATCCA+AGG	+	chr6_4:21187571-21187590	Msa0981670:intron	40.0%
	GTGTTGAATGATTAGTGCTG+AGG	-	chr6_4:21187958-21187977	None:intergenic	40.0%
	ATGTGATCCATGATTGCAAC+AGG	+	chr6_4:21188226-21188245	Msa0981670:intron	40.0%
	TGTGATCCATGATTGCAACA+GGG	+	chr6_4:21188227-21188246	Msa0981670:intron	40.0%
	AGCATCTTGTTCACTCACAA+CGG	-	chr6_4:21188288-21188307	None:intergenic	40.0%
	TCAGCACAAGAAACTGTGTT+AGG	-	chr6_4:21188383-21188402	None:intergenic	40.0%
!	GTTCCTTTAGGAAGAAGAGA+TGG	+	chr6_4:21188570-21188589	Msa0981670:CDS	40.0%
!	TCAGTAGTATTGAAAGGAGC+TGG	-	chr6_4:21188633-21188652	None:intergenic	40.0%
	TACCGCTGAAGTTGTACAAT+CGG	-	chr6_4:21188880-21188899	None:intergenic	40.0%
	ATTGTACAACTTCAGCGGTA+CGG	+	chr6_4:21188880-21188899	Msa0981670:CDS	40.0%
	GTTGTGTTAAGAGTTGGATC+GGG	-	chr6_4:21188911-21188930	None:intergenic	40.0%
	AGGAGTTGTTGGATCGAAAT+TGG	-	chr6_4:21188990-21189009	None:intergenic	40.0%
	CAAGAGTTGTTCTCAACATC+TGG	+	chr6_4:21189073-21189092	Msa0981670:CDS	40.0%
	TAGGGCTGCTATGATCAAAA+TGG	+	chr6_4:21189159-21189178	Msa0981670:CDS	40.0%
	AGGGCTGCTATGATCAAAAT+GGG	+	chr6_4:21189160-21189179	Msa0981670:CDS	40.0%
	ACAAGACTAGCAAGCATACG+AGG	-	chr6_4:21186830-21186849	None:intergenic	45.0%
!!	GTATGCTTGCTAGTCTTGTC+AGG	+	chr6_4:21186831-21186850	Msa0981670:CDS	45.0%
!!!	AGCTTTTTTTGGTAGTGGCC+GGG	-	chr6_4:21187296-21187315	None:intergenic	45.0%
!!	GATTTGTCCCTCGGATTAGT+CGG	-	chr6_4:21187598-21187617	None:intergenic	45.0%
	GGTATATCCGTATAAGACGG+TGG	+	chr6_4:21187656-21187675	Msa0981670:intron	45.0%
	GTTCGAACCACCGTCTTATA+CGG	-	chr6_4:21187666-21187685	None:intergenic	45.0%
	TCACAACCCTGTTGCAATCA+TGG	-	chr6_4:21188236-21188255	None:intergenic	45.0%
!	AAAGCTGCATTTGCTGCTCA+AGG	+	chr6_4:21188660-21188679	Msa0981670:CDS	45.0%
	AGGTCTCGATACTACTGATC+TGG	+	chr6_4:21188680-21188699	Msa0981670:CDS	45.0%
	AGCCGATTGTACAACTTCAG+CGG	+	chr6_4:21188875-21188894	Msa0981670:CDS	45.0%
	TTGTACAACTTCAGCGGTAC+GGG	+	chr6_4:21188881-21188900	Msa0981670:CDS	45.0%
	TTGCGCACAATATGTCCCAA+TGG	+	chr6_4:21188944-21188963	Msa0981670:CDS	45.0%
	AAATTGGTAAGGTTCGTGCC+AGG	-	chr6_4:21188974-21188993	None:intergenic	45.0%
	TCTAATCTCTCCTTGGTTCC+CGG	-	chr6_4:21189203-21189222	None:intergenic	45.0%
	TCAGCAGATTCATCTGAGGA+GGG	+	chr6_4:21189280-21189299	Msa0981670:CDS	45.0%
	AGATTCATCTGAGGAGGGTA+TGG	+	chr6_4:21189285-21189304	Msa0981670:CDS	45.0%
!!	ATATAATATAAATTAGAATA+AGG	+	chr6_4:21187041-21187060	Msa0981670:intron	5.0%
	TGCTGTGTAGTGGTTGTGCT+TGG	+	chr6_4:21186692-21186711	Msa0981670:CDS	50.0%
	GTGAGCTTAGCTCAGTTGGT+TGG	+	chr6_4:21187233-21187252	Msa0981670:intron	50.0%
!!!	GCTTTTTTTGGTAGTGGCCG+GGG	-	chr6_4:21187295-21187314	None:intergenic	50.0%
!!	GGATTAGTCGGTCCTTGGAT+CGG	-	chr6_4:21187586-21187605	None:intergenic	50.0%
!	TTTTCTTCCTTTCGCACCGG+TGG	+	chr6_4:21187779-21187798	Msa0981670:intron	50.0%
	CTAATCCGGCTCATGCATAG+AGG	+	chr6_4:21187809-21187828	Msa0981670:intron	50.0%
	AATACCGGGTTCGATTCCCA+GGG	-	chr6_4:21187861-21187880	None:intergenic	50.0%
	GTGCACATTATTGTAGCCGC+CGG	-	chr6_4:21188168-21188187	None:intergenic	50.0%
	AATAGGCAGATGGTCCTGAC+TGG	+	chr6_4:21188544-21188563	Msa0981670:intron	50.0%
	CCTAAAGGAACCTTCCAGTC+AGG	-	chr6_4:21188561-21188580	None:intergenic	50.0%
	CCTGACTGGAAGGTTCCTTT+AGG	+	chr6_4:21188558-21188577	Msa0981670:CDS	50.0%
	ACTGATCTGGTTGCACTCTC+CGG	+	chr6_4:21188693-21188712	Msa0981670:CDS	50.0%
	CGCACAATATGTCCCAATGG+TGG	+	chr6_4:21188947-21188966	Msa0981670:CDS	50.0%
!!	ATATGTCCCAATGGTGGACC+TGG	+	chr6_4:21188953-21188972	Msa0981670:CDS	50.0%
	TGCCTCAGCAGATTCATCTG+AGG	+	chr6_4:21189276-21189295	Msa0981670:CDS	50.0%
	CTCCTCAGATGAATCTGCTG+AGG	-	chr6_4:21189281-21189300	None:intergenic	50.0%
	CTCAGCAGATTCATCTGAGG+AGG	+	chr6_4:21189279-21189298	Msa0981670:CDS	50.0%
	CCAACTGAGCTAAGCTCACG+AGG	-	chr6_4:21187232-21187251	None:intergenic	55.0%
	CCTCGTGAGCTTAGCTCAGT+TGG	+	chr6_4:21187229-21187248	Msa0981670:intron	55.0%
	TCCAAGGACCGACTAATCCG+AGG	+	chr6_4:21187587-21187606	Msa0981670:intron	55.0%
	CCAAGGACCGACTAATCCGA+GGG	+	chr6_4:21187588-21187607	Msa0981670:intron	55.0%
	GCATGCCTCTATGCATGAGC+CGG	-	chr6_4:21187817-21187836	None:intergenic	55.0%
!	ATGCATAGAGGCATGCGCAC+TGG	+	chr6_4:21187821-21187840	Msa0981670:intron	55.0%
	TTCCCAGGGGGAACAACTCT+TGG	-	chr6_4:21187847-21187866	None:intergenic	55.0%
	ATACCGGGTTCGATTCCCAG+GGG	-	chr6_4:21187860-21187879	None:intergenic	55.0%
	GAATACCGGGTTCGATTCCC+AGG	-	chr6_4:21187862-21187881	None:intergenic	55.0%
	GAATCGAACCCGGTATTCCC+CGG	+	chr6_4:21187864-21187883	Msa0981670:intron	55.0%
	AATCGAACCCGGTATTCCCC+GGG	+	chr6_4:21187865-21187884	Msa0981670:intron	55.0%
	TTCGTGCCAGGTCCACCATT+GGG	-	chr6_4:21188962-21188981	None:intergenic	55.0%
	GGTGTGTTAACCGGGAACCA+AGG	+	chr6_4:21189190-21189209	Msa0981670:CDS	55.0%
	AAGGTCCGGGCTTCAAACCC+CGG	+	chr6_4:21187275-21187294	Msa0981670:intron	60.0%
!!	CCCTCGGATTAGTCGGTCCT+TGG	-	chr6_4:21187591-21187610	None:intergenic	60.0%
	GGACGGTGGGATTTGTCCCT+CGG	-	chr6_4:21187607-21187626	None:intergenic	60.0%
!!	CCGGATTAGTCGTGCACCAC+CGG	-	chr6_4:21187798-21187817	None:intergenic	60.0%
	CCGGTGGTGCACGACTAATC+CGG	+	chr6_4:21187795-21187814	Msa0981670:intron	60.0%
	TGGCCAAGAGTTGTTCCCCC+TGG	+	chr6_4:21187841-21187860	Msa0981670:intron	60.0%
	GGCCAAGAGTTGTTCCCCCT+GGG	+	chr6_4:21187842-21187861	Msa0981670:intron	60.0%
	TTCCCCCTGGGAATCGAACC+CGG	+	chr6_4:21187854-21187873	Msa0981670:intron	60.0%
	TACCGGGTTCGATTCCCAGG+GGG	-	chr6_4:21187859-21187878	None:intergenic	60.0%
	GTGGCAAGGAGCTCCTTCCA+AGG	-	chr6_4:21187896-21187915	None:intergenic	60.0%
	TGGAAGGAGCTCCTTGCCAC+TGG	+	chr6_4:21187896-21187915	Msa0981670:intron	60.0%
	TTGCTTGGGCTCCAGTGGCA+AGG	-	chr6_4:21187910-21187929	None:intergenic	60.0%
	CCAAGTTGCTTGGGCTCCAG+TGG	-	chr6_4:21187915-21187934	None:intergenic	60.0%
	CCACTGGAGCCCAAGCAACT+TGG	+	chr6_4:21187912-21187931	Msa0981670:intron	60.0%
	GGCAGATGGTCCTGACTGGA+AGG	+	chr6_4:21188548-21188567	Msa0981670:intron	60.0%
	GTTCGTGCCAGGTCCACCAT+TGG	-	chr6_4:21188963-21188982	None:intergenic	60.0%
!	AGTGGCCGGGGTTTGAAGCC+CGG	-	chr6_4:21187283-21187302	None:intergenic	65.0%
	TCGTGCACCACCGGTGCGAA+AGG	-	chr6_4:21187789-21187808	None:intergenic	65.0%
	AGGACGTGCCCGGGGAATAC+CGG	-	chr6_4:21187876-21187895	None:intergenic	65.0%
	GTATTCCCCGGGCACGTCCT+TGG	+	chr6_4:21187876-21187895	Msa0981670:intron	65.0%
	TCCTTCCAAGGACGTGCCCG+GGG	-	chr6_4:21187884-21187903	None:intergenic	65.0%
	CTCCTTCCAAGGACGTGCCC+GGG	-	chr6_4:21187885-21187904	None:intergenic	65.0%
	GCTCCTTCCAAGGACGTGCC+CGG	-	chr6_4:21187886-21187905	None:intergenic	65.0%
	GGACGTGCCCGGGGAATACC+GGG	-	chr6_4:21187875-21187894	None:intergenic	70.0%
	TCCCCGGGCACGTCCTTGGA+AGG	+	chr6_4:21187880-21187899	Msa0981670:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	21186566	21189525	21186566	ID=Msa0981670;Name=Msa0981670
chr6_4	mRNA	21186566	21189525	21186566	ID=Msa0981670-mRNA-1;Parent=Msa0981670;Name=Msa0981670-mRNA-1;_AED=0.28;_eAED=0.28;_QI=93\|1\|1\|1\|1\|1\|4\|204\|355
chr6_4	exon	21186566	21186880	21186566	ID=Msa0981670-mRNA-1:exon:6471;Parent=Msa0981670-mRNA-1
chr6_4	exon	21188248	21188439	21188248	ID=Msa0981670-mRNA-1:exon:6472;Parent=Msa0981670-mRNA-1
chr6_4	exon	21188549	21188714	21188549	ID=Msa0981670-mRNA-1:exon:6473;Parent=Msa0981670-mRNA-1
chr6_4	exon	21188834	21189525	21188834	ID=Msa0981670-mRNA-1:exon:6474;Parent=Msa0981670-mRNA-1
chr6_4	five_prime_UTR	21186566	21186658	21186566	ID=Msa0981670-mRNA-1:five_prime_utr;Parent=Msa0981670-mRNA-1
chr6_4	CDS	21186659	21186880	21186659	ID=Msa0981670-mRNA-1:cds;Parent=Msa0981670-mRNA-1
chr6_4	CDS	21188248	21188439	21188248	ID=Msa0981670-mRNA-1:cds;Parent=Msa0981670-mRNA-1
chr6_4	CDS	21188549	21188714	21188549	ID=Msa0981670-mRNA-1:cds;Parent=Msa0981670-mRNA-1
chr6_4	CDS	21188834	21189321	21188834	ID=Msa0981670-mRNA-1:cds;Parent=Msa0981670-mRNA-1
chr6_4	three_prime_UTR	21189322	21189525	21189322	ID=Msa0981670-mRNA-1:three_prime_utr;Parent=Msa0981670-mRNA-1

Gene Sequence

>Msa0981670

ATGAACTCTCTTCGTGCTGTAGCAATAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGAGTTACCCTTCTCTTCAAATGCACAACTTGATCCATCCTTTTACAGGAACACTTGTCCAAATGTTAGTTCCATTGTTCGTGAAGTCATAAGGAGTGTTTCTAAGAAAGATCCTCGTATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGTTGTGATGCATCAGTTTTACTAAACAAAACTGATACCGTTGTGAGTGAACAAGATGCTTTTCCAAACAGAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAAGGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCTCTTTCTGCTGAATTATCATCTACACTGGCAGATGGTCCTGACTGGAAGGTTCCTTTAGGAAGAAGAGATGGTTTAACAGCAAACCAATTACTTGCTAATAAAAATCTTCCAGCTCCTTTCAATACTACTGATGAACTTAAAGCTGCATTTGCTGCTCAAGGTCTCGATACTACTGATCTGGTTGCACTCTCCGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGCCGATTGTACAACTTCAGCGGTACGGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCCAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACAACTCCTGATAAATTTGACAAGAACTATTACTCTAATCTTCAAGTGAAAAAAGGTTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCTGGTTCAGATACCATTAGCATTGTCAACAAATTCGCAACCGATCAAAAAGCTTTTTTTGAGAGCTTTAGGGCTGCTATGATCAAAATGGGAAATATTGGTGTGTTAACCGGGAACCAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCAGCAGAACTTGGTCTTATCAATGTTGCCTCAGCAGATTCATCTGAGGAGGGTATGGTTAGCTCAATGTAA

Protein sequence

>Msa0981670

MNSLRAVAIALCCVVVVLGELPFSSNAQLDPSFYRNTCPNVSSIVREVIRSVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVVSEQDAFPNRNSLRGLDVVNQIKTAVEKACPNTVSCADILALSAELSSTLADGPDWKVPLGRRDGLTANQLLANKNLPAPFNTTDELKAAFAAQGLDTTDLVALSGAHTFGRAHCSLFVSRLYNFSGTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGSDTISIVNKFATDQKAFFESFRAAMIKMGNIGVLTGNQGEIRKQCNFVNSKSAELGLINVASADSSEEGMVSSM*