Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234170 | CAA62226.1 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234170 | sp|Q9LEH3|PER15_IPOBA | 63.696 | 303 | 109 | 1 | 25 | 326 | 21 | 323 | 2.04e-136 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234170 | Q43790 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035730 | Msa0234170 | 0.811675 | 6.218967e-51 | -8.615850e-47 |
| Msa0039750 | Msa0234170 | 0.839164 | 1.866863e-57 | -8.615850e-47 |
| Msa0040860 | Msa0234170 | -0.813371 | 2.647636e-51 | -8.615850e-47 |
| Msa0046970 | Msa0234170 | 0.827091 | 1.894143e-54 | -8.615850e-47 |
| Msa0195230 | Msa0234170 | 0.847724 | 9.646753e-60 | -8.615850e-47 |
| Msa0195260 | Msa0234170 | 0.849304 | 3.523313e-60 | -8.615850e-47 |
| Msa0225070 | Msa0234170 | -0.816142 | 6.440677e-52 | -8.615850e-47 |
| Msa0234170 | Msa0240540 | 0.813806 | 2.124445e-51 | -8.615850e-47 |
| Msa0234170 | Msa0267450 | -0.813165 | 2.939094e-51 | -8.615850e-47 |
| Msa0234170 | Msa0267510 | -0.812226 | 4.715636e-51 | -8.615850e-47 |
| Msa0234170 | Msa0279000 | 0.841637 | 4.211812e-58 | -8.615850e-47 |
| Msa0234170 | Msa0290800 | 0.804480 | 2.116777e-49 | -8.615850e-47 |
| Msa0234170 | Msa0291150 | 0.913821 | 3.941659e-84 | -8.615850e-47 |
| Msa0234170 | Msa0298400 | 0.812692 | 3.730167e-51 | -8.615850e-47 |
| Msa0234170 | Msa0304060 | -0.801016 | 1.098530e-48 | -8.615850e-47 |
| Msa0234170 | Msa0307430 | 0.842324 | 2.772924e-58 | -8.615850e-47 |
| Msa0234170 | Msa0328870 | 0.807657 | 4.541567e-50 | -8.615850e-47 |
| Msa0234170 | Msa0364030 | -0.801486 | 8.801331e-49 | -8.615850e-47 |
| Msa0234170 | Msa0368640 | 0.811121 | 8.204402e-51 | -8.615850e-47 |
| Msa0234170 | Msa0386880 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0234170 | Msa0388210 | 0.806172 | 9.358564e-50 | -8.615850e-47 |
| Msa0234170 | Msa0402770 | 0.829001 | 6.570783e-55 | -8.615850e-47 |
| Msa0234170 | Msa0403740 | -0.801549 | 8.543230e-49 | -8.615850e-47 |
| Msa0234170 | Msa0456450 | -0.804765 | 1.845723e-49 | -8.615850e-47 |
| Msa0234170 | Msa0457070 | -0.810149 | 1.330431e-50 | -8.615850e-47 |
| Msa0234170 | Msa0478430 | 0.806347 | 8.598508e-50 | -8.615850e-47 |
| Msa0234170 | Msa0506750 | 0.824277 | 8.807747e-54 | -8.615850e-47 |
| Msa0234170 | Msa0528310 | 0.818075 | 2.368346e-52 | -8.615850e-47 |
| Msa0234170 | Msa0555280 | 0.814689 | 1.355966e-51 | -8.615850e-47 |
| Msa0234170 | Msa0563440 | 0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa0234170 | Msa0579080 | 0.820894 | 5.389151e-53 | -8.615850e-47 |
| Msa0234170 | Msa0601380 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0234170 | Msa0605530 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
| Msa0234170 | Msa0606150 | 0.814022 | 1.903647e-51 | -8.615850e-47 |
| Msa0234170 | Msa0608820 | 0.835936 | 1.255467e-56 | -8.615850e-47 |
| Msa0234170 | Msa0653340 | 0.810934 | 9.003926e-51 | -8.615850e-47 |
| Msa0234170 | Msa0659020 | -0.814939 | 1.193158e-51 | -8.615850e-47 |
| Msa0234170 | Msa0661480 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0234170 | Msa0689830 | 0.802696 | 4.963724e-49 | -8.615850e-47 |
| Msa0234170 | Msa0691610 | 0.828700 | 7.770844e-55 | -8.615850e-47 |
| Msa0234170 | Msa0695760 | 0.825967 | 3.511416e-54 | -8.615850e-47 |
| Msa0234170 | Msa0704690 | 0.841630 | 4.230270e-58 | -8.615850e-47 |
| Msa0234170 | Msa0707360 | 0.819608 | 1.062191e-52 | -8.615850e-47 |
| Msa0234170 | Msa0721930 | 0.822779 | 1.973129e-53 | -8.615850e-47 |
| Msa0234170 | Msa0732970 | 0.812782 | 3.565640e-51 | -8.615850e-47 |
| Msa0234170 | Msa0741040 | 0.813088 | 3.055011e-51 | -8.615850e-47 |
| Msa0234170 | Msa0746650 | 0.843630 | 1.245368e-58 | -8.615850e-47 |
| Msa0234170 | Msa0762930 | 0.824244 | 8.965204e-54 | -8.615850e-47 |
| Msa0234170 | Msa0773960 | 0.828681 | 7.853002e-55 | -8.615850e-47 |
| Msa0234170 | Msa0802950 | -0.820913 | 5.335480e-53 | -8.615850e-47 |
| Msa0234170 | Msa0825920 | 0.801310 | 9.563903e-49 | -8.615850e-47 |
| Msa0234170 | Msa0857270 | 0.802929 | 4.442939e-49 | -8.615850e-47 |
| Msa0234170 | Msa0930770 | 0.820778 | 5.730207e-53 | -8.615850e-47 |
| Msa0234170 | Msa0967900 | -0.809956 | 1.464419e-50 | -8.615850e-47 |
| Msa0234170 | Msa0981670 | 0.992014 | 8.227569e-191 | -8.615850e-47 |
| Msa0234170 | Msa0982730 | 0.850156 | 2.037093e-60 | -8.615850e-47 |
| Msa0234170 | Msa1014550 | -0.800243 | 1.579484e-48 | -8.615850e-47 |
| Msa0234170 | Msa1146980 | 0.807294 | 5.422017e-50 | -8.615850e-47 |
| Msa0234170 | Msa1184680 | 0.814778 | 1.295634e-51 | -8.615850e-47 |
| Msa0234170 | Msa1190770 | 0.815528 | 8.826857e-52 | -8.615850e-47 |
| Msa0234170 | Msa1191530 | -0.802801 | 4.722758e-49 | -8.615850e-47 |
| Msa0234170 | Msa1197720 | 0.829593 | 4.720925e-55 | -8.615850e-47 |
| Msa0234170 | Msa1205270 | -0.830031 | 3.691443e-55 | -8.615850e-47 |
| Msa0234170 | Msa1228600 | -0.802730 | 4.883739e-49 | -8.615850e-47 |
| Msa0234170 | Msa1251410 | 0.827860 | 1.238885e-54 | -8.615850e-47 |
| Msa0234170 | Msa1266120 | -0.809929 | 1.483931e-50 | -8.615850e-47 |
| Msa0234170 | Msa1297220 | -0.820423 | 6.914142e-53 | -8.615850e-47 |
| Msa0234170 | Msa1323260 | -0.811801 | 5.838688e-51 | -8.615850e-47 |
| Msa0234170 | Msa1342360 | -0.804190 | 2.433415e-49 | -8.615850e-47 |
| Msa0234170 | Msa1343450 | -0.823307 | 1.486250e-53 | -8.615850e-47 |
| Msa0234170 | Msa1347390 | 0.836724 | 7.914211e-57 | -8.615850e-47 |
| Msa0234170 | Msa1396100 | 0.817781 | 2.760427e-52 | -8.615850e-47 |
| Msa0234170 | Msa1458790 | 0.804667 | 1.934907e-49 | -8.615850e-47 |
| Msa0234170 | Msa1462780 | 0.807712 | 4.420122e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234170 | MtrunA17_Chr2g0292241 | 96.901 | 355 | 11 | 0 | 1 | 355 | 1 | 355 | 0.0 | 712 |
| Msa0234170 | MtrunA17_Chr2g0292211 | 88.451 | 355 | 38 | 1 | 1 | 355 | 12 | 363 | 0.0 | 648 |
| Msa0234170 | MtrunA17_Chr2g0292181 | 83.380 | 355 | 57 | 1 | 1 | 355 | 10 | 362 | 0.0 | 612 |
| Msa0234170 | MtrunA17_Chr2g0292251 | 82.583 | 333 | 57 | 1 | 22 | 353 | 21 | 353 | 0.0 | 570 |
| Msa0234170 | MtrunA17_Chr2g0291751 | 70.986 | 355 | 103 | 0 | 1 | 355 | 1 | 355 | 0.0 | 529 |
| Msa0234170 | MtrunA17_Chr2g0292261 | 73.239 | 355 | 90 | 3 | 1 | 354 | 1 | 351 | 0.0 | 527 |
| Msa0234170 | MtrunA17_Chr2g0292111 | 71.549 | 355 | 101 | 0 | 1 | 355 | 1 | 355 | 0.0 | 524 |
| Msa0234170 | MtrunA17_Chr2g0292151 | 69.859 | 355 | 106 | 1 | 1 | 355 | 1 | 354 | 0.0 | 511 |
| Msa0234170 | MtrunA17_Chr2g0292271 | 71.989 | 357 | 94 | 5 | 1 | 355 | 1 | 353 | 0.0 | 511 |
| Msa0234170 | MtrunA17_Chr2g0292291 | 67.514 | 354 | 110 | 2 | 3 | 355 | 4 | 353 | 2.30e-176 | 493 |
| Msa0234170 | MtrunA17_Chr2g0292091 | 63.380 | 355 | 119 | 2 | 1 | 355 | 1 | 344 | 3.39e-164 | 462 |
| Msa0234170 | MtrunA17_Chr2g0292101 | 64.045 | 356 | 116 | 3 | 1 | 355 | 1 | 345 | 2.36e-163 | 460 |
| Msa0234170 | MtrunA17_Chr7g0258811 | 60.586 | 307 | 120 | 1 | 25 | 330 | 65 | 371 | 6.86e-134 | 386 |
| Msa0234170 | MtrunA17_Chr1g0175561 | 59.164 | 311 | 126 | 1 | 21 | 330 | 16 | 326 | 3.12e-133 | 383 |
| Msa0234170 | MtrunA17_Chr5g0404721 | 52.805 | 303 | 142 | 1 | 29 | 331 | 30 | 331 | 9.52e-110 | 323 |
| Msa0234170 | MtrunA17_Chr8g0372601 | 50.495 | 303 | 149 | 1 | 29 | 331 | 30 | 331 | 1.10e-107 | 318 |
| Msa0234170 | MtrunA17_Chr4g0070951 | 50.938 | 320 | 153 | 2 | 14 | 331 | 13 | 330 | 7.05e-107 | 316 |
| Msa0234170 | MtrunA17_Chr5g0402581 | 51.148 | 305 | 145 | 3 | 27 | 330 | 25 | 326 | 4.67e-104 | 309 |
| Msa0234170 | MtrunA17_Chr2g0299691 | 49.837 | 307 | 149 | 2 | 28 | 331 | 55 | 359 | 5.72e-104 | 310 |
| Msa0234170 | MtrunA17_Chr5g0402571 | 49.673 | 306 | 148 | 4 | 27 | 330 | 25 | 326 | 2.33e-101 | 302 |
| Msa0234170 | MtrunA17_Chr1g0155611 | 49.007 | 302 | 154 | 0 | 29 | 330 | 46 | 347 | 6.38e-99 | 296 |
| Msa0234170 | MtrunA17_Chr3g0129051 | 47.222 | 324 | 156 | 4 | 5 | 326 | 8 | 318 | 6.46e-96 | 288 |
| Msa0234170 | MtrunA17_Chr2g0320071 | 45.231 | 325 | 169 | 2 | 6 | 330 | 2 | 317 | 8.13e-96 | 287 |
| Msa0234170 | MtrunA17_Chr4g0013201 | 48.387 | 310 | 151 | 2 | 21 | 330 | 38 | 338 | 1.46e-95 | 287 |
| Msa0234170 | MtrunA17_Chr2g0292281 | 61.373 | 233 | 76 | 3 | 122 | 354 | 18 | 236 | 1.69e-94 | 281 |
| Msa0234170 | MtrunA17_Chr3g0129061 | 47.256 | 328 | 158 | 4 | 1 | 326 | 4 | 318 | 2.30e-94 | 284 |
| Msa0234170 | MtrunA17_Chr2g0320031 | 48.852 | 305 | 148 | 2 | 26 | 330 | 23 | 319 | 3.56e-94 | 283 |
| Msa0234170 | MtrunA17_Chr3g0106921 | 46.769 | 325 | 157 | 5 | 9 | 330 | 9 | 320 | 1.46e-93 | 282 |
| Msa0234170 | MtrunA17_Chr4g0024121 | 44.892 | 323 | 170 | 4 | 9 | 330 | 11 | 326 | 2.15e-93 | 281 |
| Msa0234170 | MtrunA17_Chr4g0013171 | 47.950 | 317 | 154 | 4 | 16 | 330 | 14 | 321 | 2.49e-93 | 281 |
| Msa0234170 | MtrunA17_Chr7g0244461 | 44.753 | 324 | 162 | 3 | 7 | 330 | 6 | 312 | 2.50e-93 | 281 |
| Msa0234170 | MtrunA17_Chr5g0432441 | 47.112 | 329 | 159 | 5 | 7 | 330 | 8 | 326 | 9.33e-93 | 280 |
| Msa0234170 | MtrunA17_Chr4g0043391 | 47.649 | 319 | 157 | 3 | 15 | 330 | 13 | 324 | 9.34e-93 | 280 |
| Msa0234170 | MtrunA17_Chr5g0438021 | 45.062 | 324 | 166 | 4 | 9 | 330 | 12 | 325 | 2.89e-92 | 278 |
| Msa0234170 | MtrunA17_Chr2g0322861 | 45.912 | 318 | 166 | 5 | 15 | 330 | 73 | 386 | 2.96e-92 | 281 |
| Msa0234170 | MtrunA17_Chr4g0013191 | 49.675 | 308 | 143 | 5 | 26 | 330 | 42 | 340 | 5.29e-92 | 278 |
| Msa0234170 | MtrunA17_Chr4g0038171 | 46.708 | 319 | 160 | 3 | 15 | 330 | 10 | 321 | 6.46e-92 | 278 |
| Msa0234170 | MtrunA17_Chr3g0114451 | 47.525 | 303 | 150 | 2 | 28 | 330 | 25 | 318 | 7.06e-92 | 277 |
| Msa0234170 | MtrunA17_Chr2g0320061 | 45.541 | 314 | 163 | 2 | 17 | 330 | 13 | 318 | 1.08e-91 | 277 |
| Msa0234170 | MtrunA17_Chr2g0320091 | 46.835 | 316 | 156 | 5 | 17 | 330 | 13 | 318 | 1.24e-91 | 277 |
| Msa0234170 | MtrunA17_Chr3g0129041 | 46.988 | 332 | 161 | 4 | 1 | 330 | 4 | 322 | 1.35e-91 | 277 |
| Msa0234170 | MtrunA17_Chr2g0320101 | 45.223 | 314 | 163 | 2 | 17 | 330 | 13 | 317 | 2.83e-91 | 276 |
| Msa0234170 | MtrunA17_Chr2g0320051 | 45.860 | 314 | 162 | 2 | 17 | 330 | 13 | 318 | 5.26e-91 | 275 |
| Msa0234170 | MtrunA17_Chr4g0038161 | 46.082 | 319 | 158 | 4 | 15 | 330 | 13 | 320 | 4.09e-90 | 273 |
| Msa0234170 | MtrunA17_Chr4g0038151 | 45.768 | 319 | 160 | 4 | 15 | 330 | 13 | 321 | 6.17e-90 | 273 |
| Msa0234170 | MtrunA17_Chr4g0013181 | 47.841 | 301 | 146 | 4 | 32 | 330 | 62 | 353 | 1.14e-89 | 273 |
| Msa0234170 | MtrunA17_Chr4g0068621 | 45.875 | 303 | 159 | 3 | 29 | 330 | 38 | 336 | 2.46e-89 | 271 |
| Msa0234170 | MtrunA17_Chr7g0244451 | 46.349 | 315 | 160 | 2 | 16 | 330 | 11 | 316 | 5.35e-88 | 267 |
| Msa0234170 | MtrunA17_Chr5g0400331 | 46.865 | 303 | 157 | 2 | 32 | 330 | 29 | 331 | 7.05e-88 | 268 |
| Msa0234170 | MtrunA17_Chr7g0268501 | 44.062 | 320 | 173 | 4 | 11 | 330 | 7 | 320 | 1.98e-87 | 266 |
| Msa0234170 | MtrunA17_Chr7g0268521 | 44.062 | 320 | 173 | 4 | 11 | 330 | 7 | 320 | 1.98e-87 | 266 |
| Msa0234170 | MtrunA17_Chr3g0106901 | 45.397 | 315 | 163 | 2 | 16 | 330 | 18 | 323 | 4.40e-87 | 265 |
| Msa0234170 | MtrunA17_Chr4g0063671 | 44.099 | 322 | 165 | 7 | 15 | 330 | 8 | 320 | 6.60e-87 | 265 |
| Msa0234170 | MtrunA17_Chr5g0432341 | 44.308 | 325 | 170 | 4 | 9 | 330 | 5 | 321 | 1.03e-86 | 264 |
| Msa0234170 | MtrunA17_Chr5g0432351 | 44.828 | 319 | 165 | 4 | 15 | 330 | 11 | 321 | 1.71e-86 | 264 |
| Msa0234170 | MtrunA17_Chr1g0213061 | 42.368 | 321 | 174 | 4 | 13 | 331 | 11 | 322 | 6.42e-86 | 263 |
| Msa0234170 | MtrunA17_Chr5g0432331 | 44.923 | 325 | 168 | 4 | 9 | 330 | 36 | 352 | 7.19e-86 | 263 |
| Msa0234170 | MtrunA17_Chr3g0128061 | 42.633 | 319 | 180 | 2 | 14 | 331 | 11 | 327 | 7.38e-85 | 259 |
| Msa0234170 | MtrunA17_Chr4g0013821 | 41.987 | 312 | 176 | 3 | 25 | 336 | 24 | 330 | 7.44e-85 | 260 |
| Msa0234170 | MtrunA17_Chr2g0279041 | 45.033 | 302 | 155 | 5 | 33 | 330 | 31 | 325 | 2.52e-84 | 258 |
| Msa0234170 | MtrunA17_Chr4g0013721 | 43.087 | 311 | 172 | 3 | 24 | 334 | 95 | 400 | 7.29e-84 | 260 |
| Msa0234170 | MtrunA17_Chr4g0076211 | 45.302 | 298 | 152 | 6 | 34 | 330 | 46 | 333 | 2.28e-83 | 256 |
| Msa0234170 | MtrunA17_Chr3g0107881 | 44.688 | 320 | 167 | 3 | 14 | 330 | 12 | 324 | 5.60e-82 | 252 |
| Msa0234170 | MtrunA17_Chr6g0467121 | 47.541 | 305 | 142 | 8 | 29 | 330 | 74 | 363 | 1.44e-81 | 253 |
| Msa0234170 | MtrunA17_Chr7g0254201 | 42.157 | 306 | 168 | 5 | 27 | 332 | 18 | 314 | 2.64e-81 | 250 |
| Msa0234170 | MtrunA17_Chr5g0421411 | 45.230 | 283 | 144 | 6 | 56 | 331 | 8 | 286 | 4.27e-80 | 246 |
| Msa0234170 | MtrunA17_Chr6g0467161 | 43.902 | 328 | 160 | 7 | 16 | 332 | 24 | 338 | 5.19e-80 | 248 |
| Msa0234170 | MtrunA17_Chr5g0401431 | 41.441 | 333 | 186 | 5 | 1 | 329 | 1 | 328 | 1.54e-79 | 246 |
| Msa0234170 | MtrunA17_Chr1g0148021 | 45.277 | 307 | 160 | 5 | 28 | 330 | 26 | 328 | 8.90e-79 | 244 |
| Msa0234170 | MtrunA17_Chr4g0046131 | 43.607 | 305 | 165 | 5 | 28 | 327 | 41 | 343 | 3.26e-78 | 243 |
| Msa0234170 | MtrunA17_Chr7g0224371 | 40.803 | 299 | 167 | 3 | 33 | 331 | 35 | 323 | 1.06e-77 | 241 |
| Msa0234170 | MtrunA17_Chr6g0467251 | 43.408 | 311 | 163 | 6 | 29 | 337 | 36 | 335 | 2.01e-77 | 241 |
| Msa0234170 | MtrunA17_Chr5g0405991 | 40.184 | 326 | 183 | 8 | 6 | 330 | 2 | 316 | 2.23e-77 | 240 |
| Msa0234170 | MtrunA17_Chr2g0296621 | 43.522 | 301 | 158 | 6 | 32 | 331 | 53 | 342 | 2.35e-77 | 241 |
| Msa0234170 | MtrunA17_Chr1g0204011 | 42.484 | 306 | 170 | 4 | 25 | 330 | 23 | 322 | 2.36e-77 | 240 |
| Msa0234170 | MtrunA17_Chr1g0194271 | 40.299 | 335 | 187 | 4 | 7 | 330 | 8 | 340 | 7.72e-77 | 239 |
| Msa0234170 | MtrunA17_Chr1g0194151 | 39.697 | 330 | 189 | 4 | 7 | 330 | 8 | 333 | 1.75e-76 | 238 |
| Msa0234170 | MtrunA17_Chr1g0164891 | 43.046 | 302 | 166 | 4 | 33 | 330 | 93 | 392 | 2.22e-76 | 240 |
| Msa0234170 | MtrunA17_Chr4g0072091 | 45.215 | 303 | 156 | 5 | 28 | 326 | 23 | 319 | 3.95e-76 | 237 |
| Msa0234170 | MtrunA17_Chr8g0371381 | 40.717 | 307 | 174 | 5 | 24 | 330 | 21 | 319 | 2.15e-75 | 235 |
| Msa0234170 | MtrunA17_Chr4g0075241 | 40.000 | 325 | 187 | 5 | 9 | 330 | 8 | 327 | 9.46e-75 | 234 |
| Msa0234170 | MtrunA17_Chr4g0053871 | 42.508 | 327 | 174 | 6 | 5 | 326 | 3 | 320 | 2.81e-74 | 233 |
| Msa0234170 | MtrunA17_Chr6g0460711 | 39.815 | 324 | 178 | 8 | 11 | 330 | 4 | 314 | 1.25e-72 | 228 |
| Msa0234170 | MtrunA17_Chr1g0197411 | 40.549 | 328 | 185 | 6 | 9 | 330 | 7 | 330 | 1.44e-71 | 226 |
| Msa0234170 | MtrunA17_Chr7g0225221 | 40.181 | 331 | 186 | 5 | 1 | 330 | 1 | 320 | 1.80e-71 | 225 |
| Msa0234170 | MtrunA17_Chr1g0157051 | 39.198 | 324 | 189 | 5 | 6 | 329 | 2 | 317 | 2.36e-71 | 225 |
| Msa0234170 | MtrunA17_Chr1g0188431 | 38.323 | 334 | 189 | 7 | 1 | 330 | 7 | 327 | 2.74e-71 | 225 |
| Msa0234170 | MtrunA17_Chr2g0329641 | 39.228 | 311 | 171 | 6 | 28 | 330 | 35 | 335 | 7.69e-70 | 221 |
| Msa0234170 | MtrunA17_Chr6g0477071 | 37.003 | 327 | 187 | 6 | 4 | 330 | 35 | 342 | 3.79e-69 | 220 |
| Msa0234170 | MtrunA17_Chr7g0254231 | 39.935 | 308 | 167 | 7 | 27 | 331 | 20 | 312 | 1.32e-68 | 218 |
| Msa0234170 | MtrunA17_Chr2g0278671 | 40.193 | 311 | 174 | 6 | 25 | 330 | 20 | 323 | 1.78e-68 | 218 |
| Msa0234170 | MtrunA17_Chr2g0279061 | 45.038 | 262 | 133 | 5 | 73 | 330 | 12 | 266 | 2.85e-67 | 213 |
| Msa0234170 | MtrunA17_Chr5g0432401 | 38.554 | 332 | 154 | 4 | 1 | 329 | 1 | 285 | 3.95e-65 | 207 |
| Msa0234170 | MtrunA17_Chr8g0364291 | 37.580 | 314 | 188 | 4 | 25 | 334 | 19 | 328 | 1.15e-64 | 208 |
| Msa0234170 | MtrunA17_Chr5g0413051 | 38.462 | 312 | 179 | 7 | 27 | 330 | 71 | 377 | 1.15e-63 | 207 |
| Msa0234170 | MtrunA17_Chr2g0316481 | 35.897 | 351 | 184 | 8 | 14 | 326 | 55 | 402 | 9.07e-63 | 205 |
| Msa0234170 | MtrunA17_Chr2g0316791 | 35.795 | 352 | 185 | 8 | 14 | 327 | 55 | 403 | 9.99e-63 | 205 |
| Msa0234170 | MtrunA17_Chr3g0136751 | 39.355 | 310 | 178 | 4 | 24 | 330 | 20 | 322 | 2.17e-62 | 202 |
| Msa0234170 | MtrunA17_Chr6g0451571 | 39.228 | 311 | 178 | 7 | 25 | 330 | 30 | 334 | 3.92e-62 | 201 |
| Msa0234170 | MtrunA17_Chr2g0316831 | 35.613 | 351 | 185 | 8 | 14 | 326 | 91 | 438 | 1.66e-61 | 203 |
| Msa0234170 | MtrunA17_Chr1g0181511 | 38.511 | 309 | 177 | 5 | 27 | 331 | 25 | 324 | 3.02e-61 | 199 |
| Msa0234170 | MtrunA17_Chr2g0316191 | 35.127 | 353 | 187 | 8 | 14 | 327 | 55 | 404 | 6.89e-61 | 201 |
| Msa0234170 | MtrunA17_Chr2g0311251 | 36.202 | 337 | 179 | 7 | 27 | 331 | 9 | 341 | 3.31e-59 | 194 |
| Msa0234170 | MtrunA17_Chr1g0181431 | 37.338 | 308 | 182 | 4 | 27 | 331 | 25 | 324 | 9.22e-59 | 192 |
| Msa0234170 | MtrunA17_Chr1g0181481 | 37.987 | 308 | 180 | 4 | 27 | 331 | 25 | 324 | 1.38e-58 | 192 |
| Msa0234170 | MtrunA17_Chr4g0074851 | 37.013 | 308 | 181 | 5 | 32 | 335 | 35 | 333 | 1.52e-58 | 192 |
| Msa0234170 | MtrunA17_Chr2g0311241 | 32.108 | 408 | 186 | 10 | 3 | 331 | 36 | 431 | 1.28e-55 | 187 |
| Msa0234170 | MtrunA17_Chr4g0004591 | 32.099 | 324 | 158 | 4 | 26 | 329 | 74 | 355 | 1.19e-48 | 167 |
| Msa0234170 | MtrunA17_Chr3g0114461 | 45.263 | 190 | 96 | 2 | 141 | 330 | 11 | 192 | 1.28e-46 | 157 |
| Msa0234170 | MtrunA17_Chr2g0316811 | 35.628 | 247 | 135 | 4 | 14 | 237 | 29 | 274 | 1.08e-42 | 151 |
| Msa0234170 | MtrunA17_Chr3g0114491 | 55.238 | 105 | 47 | 0 | 28 | 132 | 17 | 121 | 1.37e-34 | 124 |
| Msa0234170 | MtrunA17_Chr2g0316141 | 33.333 | 291 | 139 | 10 | 75 | 331 | 11 | 280 | 5.95e-34 | 126 |
| Msa0234170 | MtrunA17_Chr2g0316181 | 33.333 | 291 | 139 | 10 | 75 | 331 | 11 | 280 | 5.95e-34 | 126 |
| Msa0234170 | MtrunA17_Chr1g0181501 | 35.385 | 195 | 111 | 5 | 142 | 331 | 6 | 190 | 5.52e-27 | 105 |
| Msa0234170 | MtrunA17_Chr3g0104101 | 40.411 | 146 | 76 | 6 | 193 | 331 | 9 | 150 | 6.99e-24 | 95.9 |
| Msa0234170 | MtrunA17_Chr5g0432321 | 40.323 | 124 | 66 | 2 | 150 | 273 | 17 | 132 | 7.78e-21 | 87.0 |
| Msa0234170 | MtrunA17_Chr1g0181491 | 40.870 | 115 | 66 | 2 | 18 | 132 | 1 | 113 | 1.33e-20 | 87.0 |
| Msa0234170 | MtrunA17_Chr6g0468731 | 54.930 | 71 | 28 | 2 | 68 | 138 | 22 | 88 | 1.90e-17 | 76.6 |
| Msa0234170 | MtrunA17_Chr7g0254181 | 37.600 | 125 | 73 | 3 | 72 | 195 | 2 | 122 | 2.96e-17 | 78.2 |
| Msa0234170 | MtrunA17_Chr5g0432361 | 42.529 | 87 | 49 | 1 | 243 | 329 | 23 | 108 | 6.51e-16 | 72.8 |
| Msa0234170 | MtrunA17_Chr1g0196191 | 54.930 | 71 | 29 | 2 | 63 | 133 | 21 | 88 | 2.34e-14 | 70.1 |
| Msa0234170 | MtrunA17_Chr7g0268491 | 41.414 | 99 | 54 | 3 | 232 | 330 | 3 | 97 | 7.86e-14 | 66.6 |
| Msa0234170 | MtrunA17_Chr3g0137751 | 26.471 | 272 | 152 | 8 | 44 | 314 | 91 | 315 | 2.09e-13 | 70.1 |
| Msa0234170 | MtrunA17_Chr4g0013811 | 43.056 | 72 | 41 | 0 | 141 | 212 | 7 | 78 | 1.72e-12 | 62.4 |
| Msa0234170 | MtrunA17_Chr5g0423911 | 47.059 | 68 | 34 | 1 | 259 | 326 | 2 | 67 | 8.36e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234170 | AT5G06730.1 | 55.723 | 332 | 145 | 1 | 14 | 343 | 18 | 349 | 1.26e-132 | 383 |
| Msa0234170 | AT5G06720.1 | 56.467 | 317 | 138 | 0 | 14 | 330 | 17 | 333 | 1.27e-131 | 379 |
| Msa0234170 | AT2G38380.1 | 54.955 | 333 | 140 | 3 | 24 | 355 | 26 | 349 | 3.25e-127 | 369 |
| Msa0234170 | AT2G38390.1 | 53.453 | 333 | 145 | 3 | 24 | 355 | 26 | 349 | 9.98e-126 | 365 |
| Msa0234170 | AT3G49120.1 | 54.277 | 339 | 150 | 3 | 14 | 347 | 14 | 352 | 2.85e-124 | 362 |
| Msa0234170 | AT3G32980.1 | 55.692 | 325 | 142 | 2 | 25 | 347 | 27 | 351 | 1.27e-123 | 360 |
| Msa0234170 | AT3G49110.1 | 55.077 | 325 | 144 | 2 | 25 | 347 | 29 | 353 | 8.16e-121 | 353 |
| Msa0234170 | AT4G08770.1 | 54.688 | 320 | 143 | 2 | 25 | 342 | 20 | 339 | 1.65e-120 | 352 |
| Msa0234170 | AT4G08780.1 | 53.125 | 320 | 148 | 2 | 25 | 342 | 20 | 339 | 8.64e-117 | 342 |
| Msa0234170 | AT5G19880.1 | 52.751 | 309 | 143 | 2 | 25 | 330 | 21 | 329 | 1.23e-112 | 331 |
| Msa0234170 | AT2G18140.1 | 51.656 | 302 | 145 | 1 | 29 | 330 | 35 | 335 | 6.08e-108 | 319 |
| Msa0234170 | AT2G18150.1 | 51.316 | 304 | 147 | 1 | 27 | 330 | 34 | 336 | 8.43e-108 | 319 |
| Msa0234170 | AT4G36430.1 | 51.623 | 308 | 148 | 1 | 24 | 331 | 25 | 331 | 7.92e-107 | 316 |
| Msa0234170 | AT5G66390.1 | 49.675 | 308 | 154 | 1 | 23 | 330 | 27 | 333 | 3.64e-106 | 315 |
| Msa0234170 | AT5G19890.1 | 51.792 | 307 | 140 | 4 | 27 | 331 | 28 | 328 | 3.25e-104 | 310 |
| Msa0234170 | AT3G50990.1 | 49.837 | 307 | 153 | 1 | 24 | 330 | 36 | 341 | 1.98e-102 | 305 |
| Msa0234170 | AT1G44970.1 | 49.351 | 308 | 154 | 1 | 23 | 330 | 41 | 346 | 1.65e-100 | 301 |
| Msa0234170 | AT1G14550.1 | 48.366 | 306 | 150 | 3 | 26 | 330 | 23 | 321 | 2.17e-97 | 292 |
| Msa0234170 | AT5G05340.1 | 46.815 | 314 | 156 | 3 | 19 | 330 | 20 | 324 | 4.70e-96 | 288 |
| Msa0234170 | AT4G16270.1 | 47.855 | 303 | 153 | 4 | 29 | 330 | 50 | 348 | 7.28e-94 | 284 |
| Msa0234170 | AT1G14540.1 | 46.584 | 322 | 165 | 3 | 9 | 330 | 1 | 315 | 1.40e-93 | 282 |
| Msa0234170 | AT1G49570.1 | 45.902 | 305 | 160 | 3 | 27 | 328 | 46 | 348 | 2.61e-92 | 280 |
| Msa0234170 | AT1G68850.1 | 46.382 | 304 | 157 | 5 | 33 | 331 | 34 | 336 | 3.77e-91 | 276 |
| Msa0234170 | AT1G05260.1 | 42.216 | 334 | 182 | 7 | 1 | 331 | 1 | 326 | 9.65e-87 | 265 |
| Msa0234170 | AT2G41480.1 | 44.037 | 327 | 169 | 6 | 9 | 330 | 11 | 328 | 5.46e-86 | 263 |
| Msa0234170 | AT4G11290.1 | 41.846 | 325 | 184 | 4 | 8 | 330 | 5 | 326 | 3.49e-85 | 261 |
| Msa0234170 | AT1G71695.1 | 46.104 | 308 | 154 | 6 | 29 | 333 | 44 | 342 | 5.56e-85 | 261 |
| Msa0234170 | AT5G58390.1 | 45.570 | 316 | 160 | 5 | 14 | 326 | 6 | 312 | 1.46e-84 | 259 |
| Msa0234170 | AT2G35380.1 | 47.351 | 302 | 155 | 3 | 33 | 330 | 34 | 335 | 1.60e-84 | 259 |
| Msa0234170 | AT5G58400.1 | 44.343 | 327 | 167 | 5 | 3 | 326 | 7 | 321 | 1.64e-84 | 259 |
| Msa0234170 | AT3G03670.1 | 43.092 | 304 | 170 | 2 | 27 | 330 | 21 | 321 | 4.83e-84 | 258 |
| Msa0234170 | AT2G22420.1 | 42.025 | 326 | 177 | 4 | 15 | 340 | 16 | 329 | 2.00e-83 | 256 |
| Msa0234170 | AT2G18980.1 | 45.652 | 322 | 162 | 6 | 15 | 330 | 9 | 323 | 1.20e-82 | 254 |
| Msa0234170 | AT5G15180.1 | 42.581 | 310 | 167 | 6 | 25 | 330 | 27 | 329 | 4.97e-82 | 253 |
| Msa0234170 | AT3G21770.1 | 42.342 | 333 | 186 | 5 | 1 | 331 | 1 | 329 | 1.10e-81 | 252 |
| Msa0234170 | AT5G14130.1 | 43.711 | 318 | 170 | 5 | 18 | 330 | 17 | 330 | 2.21e-81 | 251 |
| Msa0234170 | AT5G64120.1 | 43.960 | 298 | 159 | 5 | 33 | 330 | 39 | 328 | 2.58e-81 | 251 |
| Msa0234170 | AT4G30170.1 | 44.984 | 309 | 159 | 5 | 26 | 330 | 24 | 325 | 2.74e-81 | 251 |
| Msa0234170 | AT3G01190.1 | 42.105 | 323 | 178 | 7 | 9 | 330 | 7 | 321 | 3.07e-81 | 251 |
| Msa0234170 | AT5G14130.2 | 43.711 | 318 | 170 | 5 | 18 | 330 | 58 | 371 | 5.68e-81 | 251 |
| Msa0234170 | AT1G05240.1 | 44.156 | 308 | 158 | 5 | 29 | 330 | 26 | 325 | 1.53e-80 | 249 |
| Msa0234170 | AT1G05250.1 | 44.156 | 308 | 158 | 5 | 29 | 330 | 26 | 325 | 1.53e-80 | 249 |
| Msa0234170 | AT5G67400.1 | 42.331 | 326 | 181 | 4 | 9 | 330 | 7 | 329 | 2.53e-79 | 246 |
| Msa0234170 | AT5G51890.1 | 43.322 | 307 | 167 | 5 | 25 | 330 | 22 | 322 | 2.82e-79 | 246 |
| Msa0234170 | AT5G17820.1 | 41.447 | 304 | 166 | 5 | 27 | 330 | 22 | 313 | 5.20e-79 | 244 |
| Msa0234170 | AT4G37530.1 | 43.366 | 309 | 170 | 3 | 25 | 330 | 23 | 329 | 5.51e-79 | 245 |
| Msa0234170 | AT5G17820.2 | 41.447 | 304 | 166 | 5 | 27 | 330 | 75 | 366 | 8.69e-78 | 243 |
| Msa0234170 | AT4G25980.1 | 41.284 | 327 | 177 | 6 | 9 | 330 | 10 | 326 | 2.44e-77 | 241 |
| Msa0234170 | AT5G39580.1 | 41.265 | 332 | 177 | 8 | 1 | 330 | 4 | 319 | 7.28e-77 | 239 |
| Msa0234170 | AT3G49960.1 | 42.025 | 326 | 179 | 5 | 9 | 330 | 10 | 329 | 1.01e-76 | 239 |
| Msa0234170 | AT4G37520.1 | 41.042 | 307 | 176 | 3 | 27 | 330 | 25 | 329 | 6.28e-74 | 232 |
| Msa0234170 | AT5G64110.1 | 44.371 | 302 | 155 | 7 | 33 | 330 | 38 | 330 | 1.02e-73 | 232 |
| Msa0234170 | AT4G37520.2 | 40.717 | 307 | 174 | 4 | 27 | 330 | 25 | 326 | 2.38e-72 | 228 |
| Msa0234170 | AT5G64100.1 | 42.193 | 301 | 161 | 7 | 33 | 330 | 41 | 331 | 2.94e-72 | 228 |
| Msa0234170 | AT2G39040.1 | 42.444 | 311 | 168 | 7 | 27 | 330 | 44 | 350 | 6.22e-72 | 228 |
| Msa0234170 | AT4G33420.1 | 38.226 | 327 | 188 | 7 | 4 | 330 | 13 | 325 | 8.54e-71 | 224 |
| Msa0234170 | AT4G33420.2 | 38.226 | 327 | 188 | 7 | 4 | 330 | 60 | 372 | 3.48e-70 | 224 |
| Msa0234170 | AT5G42180.1 | 39.628 | 323 | 185 | 7 | 8 | 329 | 3 | 316 | 4.90e-70 | 222 |
| Msa0234170 | AT2G34060.1 | 39.935 | 308 | 176 | 6 | 26 | 327 | 39 | 343 | 7.19e-69 | 220 |
| Msa0234170 | AT2G24800.1 | 40.909 | 308 | 171 | 5 | 27 | 330 | 29 | 329 | 1.44e-68 | 218 |
| Msa0234170 | AT5G24070.1 | 38.757 | 338 | 186 | 8 | 4 | 331 | 10 | 336 | 6.32e-68 | 217 |
| Msa0234170 | AT4G37530.2 | 44.747 | 257 | 139 | 2 | 25 | 278 | 23 | 279 | 1.00e-67 | 214 |
| Msa0234170 | AT4G33870.1 | 35.629 | 334 | 169 | 6 | 33 | 327 | 72 | 398 | 2.04e-67 | 218 |
| Msa0234170 | AT1G77100.1 | 39.514 | 329 | 183 | 7 | 7 | 330 | 2 | 319 | 3.63e-67 | 214 |
| Msa0234170 | AT4G31760.1 | 38.387 | 310 | 183 | 3 | 23 | 330 | 23 | 326 | 5.82e-67 | 214 |
| Msa0234170 | AT4G17690.1 | 39.216 | 306 | 175 | 5 | 29 | 331 | 26 | 323 | 5.76e-66 | 211 |
| Msa0234170 | AT5G40150.1 | 39.423 | 312 | 180 | 4 | 21 | 330 | 24 | 328 | 2.19e-65 | 210 |
| Msa0234170 | AT5G47000.1 | 37.730 | 326 | 192 | 6 | 9 | 331 | 14 | 331 | 3.29e-65 | 210 |
| Msa0234170 | AT1G24110.1 | 38.037 | 326 | 193 | 6 | 8 | 330 | 3 | 322 | 5.16e-65 | 209 |
| Msa0234170 | AT2G43480.1 | 38.608 | 316 | 173 | 8 | 25 | 330 | 31 | 335 | 1.26e-64 | 208 |
| Msa0234170 | AT4G26010.1 | 40.193 | 311 | 164 | 8 | 24 | 330 | 17 | 309 | 1.43e-64 | 207 |
| Msa0234170 | AT4G26010.2 | 40.193 | 311 | 164 | 8 | 24 | 330 | 45 | 337 | 1.99e-64 | 208 |
| Msa0234170 | AT3G28200.1 | 37.540 | 309 | 183 | 4 | 24 | 330 | 16 | 316 | 6.80e-63 | 203 |
| Msa0234170 | AT1G30870.1 | 38.816 | 304 | 173 | 6 | 33 | 333 | 55 | 348 | 2.49e-62 | 203 |
| Msa0234170 | AT5G22410.1 | 37.338 | 308 | 173 | 8 | 27 | 326 | 26 | 321 | 5.60e-62 | 201 |
| Msa0234170 | AT2G35380.2 | 45.344 | 247 | 131 | 3 | 88 | 330 | 1 | 247 | 1.95e-60 | 195 |
| Msa0234170 | AT4G21960.1 | 37.829 | 304 | 176 | 5 | 32 | 331 | 34 | 328 | 2.90e-60 | 197 |
| Msa0234170 | AT1G34510.1 | 39.414 | 307 | 168 | 8 | 27 | 331 | 20 | 310 | 3.70e-60 | 196 |
| Msa0234170 | AT3G17070.1 | 37.838 | 333 | 188 | 10 | 7 | 330 | 17 | 339 | 4.20e-58 | 192 |
| Msa0234170 | AT2G37130.1 | 36.570 | 309 | 184 | 5 | 26 | 330 | 27 | 327 | 9.83e-56 | 185 |
| Msa0234170 | AT2G37130.2 | 36.634 | 303 | 180 | 5 | 32 | 330 | 2 | 296 | 2.63e-54 | 181 |
| Msa0234170 | AT4G25980.2 | 41.202 | 233 | 124 | 5 | 9 | 236 | 55 | 279 | 8.91e-50 | 168 |
| Msa0234170 | AT5G39580.2 | 42.157 | 204 | 104 | 5 | 1 | 203 | 4 | 194 | 4.64e-41 | 144 |
| Msa0234170 | AT3G17070.2 | 37.546 | 269 | 149 | 10 | 71 | 330 | 18 | 276 | 5.60e-41 | 145 |
| Msa0234170 | AT2G24800.2 | 42.442 | 172 | 95 | 1 | 27 | 198 | 29 | 196 | 4.27e-37 | 134 |
| Msa0234170 | AT1G77490.2 | 28.137 | 263 | 151 | 9 | 63 | 314 | 106 | 341 | 2.44e-15 | 77.0 |
| Msa0234170 | AT1G77490.1 | 28.137 | 263 | 151 | 9 | 63 | 314 | 106 | 341 | 2.61e-15 | 77.0 |
| Msa0234170 | AT3G09640.2 | 25.352 | 213 | 117 | 5 | 103 | 313 | 74 | 246 | 4.63e-13 | 68.9 |
| Msa0234170 | AT3G09640.1 | 25.352 | 213 | 117 | 5 | 103 | 313 | 74 | 246 | 4.63e-13 | 68.9 |
| Msa0234170 | AT3G42570.1 | 31.507 | 146 | 87 | 4 | 53 | 196 | 15 | 149 | 2.82e-11 | 61.6 |
Find 69 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATTTGAAGTGTTTCTT+TGG | 0.195427 | 2_2:+6813978 | Msa0234170:three_prime_UTR |
| TGGACAAGTGTTCCTGTAAA+AGG | 0.264524 | 2_2:-6811304 | None:intergenic |
| TAGGGCTGCTATGATCAAAA+TGG | 0.283772 | 2_2:+6813710 | Msa0234170:CDS |
| TTCATTTGAAGTGTTTCTTT+GGG | 0.295342 | 2_2:+6813979 | Msa0234170:three_prime_UTR |
| GGAAATATTGGTGTGTTAAC+CGG | 0.297989 | 2_2:+6813732 | Msa0234170:CDS |
| AGGAGTTGTTGGATCGAAAT+TGG | 0.299793 | 2_2:-6813538 | None:intergenic |
| TCTAATCTCTCCTTGGTTCC+CGG | 0.308228 | 2_2:-6813751 | None:intergenic |
| CCTCTTAATGAGTTTCTGTT+TGG | 0.310696 | 2_2:-6812862 | None:intergenic |
| ATTTCAGGTGCTCATACATT+TGG | 0.340486 | 2_2:+6813378 | Msa0234170:intron |
| TAGTTCTTGTCAAATTTATC+AGG | 0.341189 | 2_2:-6813558 | None:intergenic |
| CAGAAACTCATTAAGAGGTT+TGG | 0.342785 | 2_2:+6812867 | Msa0234170:CDS |
| CGAACAATGGAACTAACATT+TGG | 0.350033 | 2_2:-6811324 | None:intergenic |
| CCAAACAGAAACTCATTAAG+AGG | 0.372095 | 2_2:+6812862 | Msa0234170:CDS |
| CCTGACTGGAAGGTTCCTTT+AGG | 0.381585 | 2_2:+6813109 | Msa0234170:CDS |
| CAAGAGTTGTTCTCAACATC+TGG | 0.390230 | 2_2:+6813624 | Msa0234170:CDS |
| ATGATCAAAATGGGAAATAT+TGG | 0.401401 | 2_2:+6813720 | Msa0234170:CDS |
| TGCTGTGTAGTGGTTGTGCT+TGG | 0.416566 | 2_2:+6811243 | Msa0234170:CDS |
| GCTATAACTATGCACATTCA+TGG | 0.423896 | 2_2:+6813907 | Msa0234170:three_prime_UTR |
| CCATTGTTCGTGAAGTCATA+AGG | 0.434806 | 2_2:+6811337 | Msa0234170:CDS |
| GAATTTGTTGACAATGCTAA+TGG | 0.449121 | 2_2:-6813655 | None:intergenic |
| CTCAATGTAAATGTAGTGAT+TGG | 0.450297 | 2_2:+6813863 | Msa0234170:exon |
| GTATGCTTGCTAGTCTTGTC+AGG | 0.452656 | 2_2:+6811382 | Msa0234170:CDS |
| AAACCATCTCTTCTTCCTAA+AGG | 0.452959 | 2_2:-6813124 | None:intergenic |
| TTGTACAACTTCAGCGGTAC+GGG | 0.454738 | 2_2:+6813432 | Msa0234170:CDS |
| TCAAATTTATCAGGAGTTGT+TGG | 0.456888 | 2_2:-6813549 | None:intergenic |
| AATCAAAACAGCTGTGGAAA+AGG | 0.458727 | 2_2:+6812903 | Msa0234170:CDS |
| AGGTCTCGATACTACTGATC+TGG | 0.469058 | 2_2:+6813231 | Msa0234170:CDS |
| TCAGCACAAGAAACTGTGTT+AGG | 0.474603 | 2_2:-6812931 | None:intergenic |
| AATTCAAAATCAGCAGAACT+TGG | 0.476123 | 2_2:+6813792 | Msa0234170:CDS |
| AAGTAAGTTGTGTTAAGAGT+TGG | 0.480928 | 2_2:-6813465 | None:intergenic |
| ACTGATCTGGTTGCACTCTC+CGG | 0.486593 | 2_2:+6813244 | Msa0234170:CDS |
| AATAGGCAGATGGTCCTGAC+TGG | 0.492532 | 2_2:+6813095 | Msa0234170:intron |
| AGATTCATCTGAGGAGGGTA+TGG | 0.494872 | 2_2:+6813836 | Msa0234170:CDS |
| CCTAAAGGAACCTTCCAGTC+AGG | 0.502692 | 2_2:-6813109 | None:intergenic |
| AGGGCTGCTATGATCAAAAT+GGG | 0.502945 | 2_2:+6813711 | Msa0234170:CDS |
| TTCGTGCCAGGTCCACCATT+GGG | 0.506163 | 2_2:-6813510 | None:intergenic |
| TCAGTAGTATTGAAAGGAGC+TGG | 0.514353 | 2_2:-6813181 | None:intergenic |
| AGTTGTGTTAAGAGTTGGAT+CGG | 0.517053 | 2_2:-6813460 | None:intergenic |
| GAAATATTGGTGTGTTAACC+GGG | 0.517789 | 2_2:+6813733 | Msa0234170:CDS |
| CCTTATGACTTCACGAACAA+TGG | 0.525359 | 2_2:-6811337 | None:intergenic |
| TTGTTGGATCGAAATTGGTA+AGG | 0.530982 | 2_2:-6813533 | None:intergenic |
| ATATGTCCCAATGGTGGACC+TGG | 0.533119 | 2_2:+6813504 | Msa0234170:CDS |
| TACCGCTGAAGTTGTACAAT+CGG | 0.535831 | 2_2:-6813428 | None:intergenic |
| AAGTTGTGCATTTGAAGAGA+AGG | 0.538902 | 2_2:-6811274 | None:intergenic |
| GTTCGTGCCAGGTCCACCAT+TGG | 0.546841 | 2_2:-6813511 | None:intergenic |
| ATATAGTAAAATTAATGCTA+AGG | 0.551122 | 2_2:-6814047 | None:intergenic |
| AGTTCATCAGTAGTATTGAA+AGG | 0.552774 | 2_2:-6813187 | None:intergenic |
| AAAGCTGCATTTGCTGCTCA+AGG | 0.555072 | 2_2:+6813211 | Msa0234170:CDS |
| GTTGTGTTAAGAGTTGGATC+GGG | 0.555195 | 2_2:-6813459 | None:intergenic |
| AATAGCTTTGTGCTGTGTAG+TGG | 0.557732 | 2_2:+6811233 | Msa0234170:CDS |
| GGCAGATGGTCCTGACTGGA+AGG | 0.562824 | 2_2:+6813099 | Msa0234170:intron |
| ATTGTACAACTTCAGCGGTA+CGG | 0.567546 | 2_2:+6813431 | Msa0234170:CDS |
| CTCAGCAGATTCATCTGAGG+AGG | 0.567597 | 2_2:+6813830 | Msa0234170:CDS |
| AGTTGTGCATTTGAAGAGAA+GGG | 0.569161 | 2_2:-6811273 | None:intergenic |
| CAAGTGTTCCTGTAAAAGGA+TGG | 0.579502 | 2_2:-6811300 | None:intergenic |
| GTTCCTTTAGGAAGAAGAGA+TGG | 0.584332 | 2_2:+6813121 | Msa0234170:CDS |
| AAATTGGTAAGGTTCGTGCC+AGG | 0.584556 | 2_2:-6813522 | None:intergenic |
| CGCACAATATGTCCCAATGG+TGG | 0.600150 | 2_2:+6813498 | Msa0234170:CDS |
| TGCTGAATTATCATCTACAC+TGG | 0.600987 | 2_2:+6812969 | Msa0234170:CDS |
| GAATCAAATCAAAACAGCTG+TGG | 0.608984 | 2_2:+6812897 | Msa0234170:CDS |
| GATGAAATAAAATAGGCAGA+TGG | 0.618837 | 2_2:+6813085 | Msa0234170:intron |
| AGCCGATTGTACAACTTCAG+CGG | 0.631715 | 2_2:+6813426 | Msa0234170:CDS |
| AGCATCTTGTTCACTCACAA+CGG | 0.632766 | 2_2:-6812836 | None:intergenic |
| CTCCTCAGATGAATCTGCTG+AGG | 0.635056 | 2_2:-6813829 | None:intergenic |
| TTGCGCACAATATGTCCCAA+TGG | 0.640051 | 2_2:+6813495 | Msa0234170:CDS |
| GGTGTGTTAACCGGGAACCA+AGG | 0.643371 | 2_2:+6813741 | Msa0234170:CDS |
| TCAGCAGATTCATCTGAGGA+GGG | 0.667386 | 2_2:+6813831 | Msa0234170:CDS |
| ACAAGACTAGCAAGCATACG+AGG | 0.681087 | 2_2:-6811378 | None:intergenic |
| TGCCTCAGCAGATTCATCTG+AGG | 0.692262 | 2_2:+6813827 | Msa0234170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAAAATAAAATT+TGG | - | chr2_2:6812106-6812125 | None:intergenic | 0.0% |
| !!! | TTAATATTTTTTACTATTAG+TGG | - | chr2_2:6811677-6811696 | None:intergenic | 10.0% |
| !!! | TTTTATTTTAATTAAACAGA+AGG | - | chr2_2:6811930-6811949 | None:intergenic | 10.0% |
| !! | AAAATATATAGTATAGTTTG+AGG | - | chr2_2:6813005-6813024 | None:intergenic | 15.0% |
| !! | AATTGAATTTGAAAATTCAA+TGG | - | chr2_2:6813037-6813056 | None:intergenic | 15.0% |
| !! | TTTGTTTCAAAAATTCTAAT+TGG | + | chr2_2:6813287-6813306 | Msa0234170:intron | 15.0% |
| !! | ATATAGTAAAATTAATGCTA+AGG | - | chr2_2:6814050-6814069 | None:intergenic | 15.0% |
| !! | TCATACTACTATAAGATTAT+AGG | - | chr2_2:6811538-6811557 | None:intergenic | 20.0% |
| !! | TGTACTAATTCTACTTAAAT+GGG | - | chr2_2:6811565-6811584 | None:intergenic | 20.0% |
| !! | ATGTACTAATTCTACTTAAA+TGG | - | chr2_2:6811566-6811585 | None:intergenic | 20.0% |
| !!! | ATTTAACTTACTTAATAACC+CGG | + | chr2_2:6811733-6811752 | Msa0234170:intron | 20.0% |
| !! | AAAATGCATAAAAATATGCA+AGG | + | chr2_2:6811807-6811826 | Msa0234170:intron | 20.0% |
| !!! | ATGTGAAAAATAGCTTTTTT+TGG | - | chr2_2:6811858-6811877 | None:intergenic | 20.0% |
| !!! | CTATTTTTCACATATTTTGA+GGG | + | chr2_2:6811865-6811884 | Msa0234170:intron | 20.0% |
| !! | TGCTTAATATTTATAGCTTA+AGG | + | chr2_2:6811963-6811982 | Msa0234170:intron | 20.0% |
| !!! | TTAAGTTGTTCACATTTAAT+TGG | + | chr2_2:6812186-6812205 | Msa0234170:intron | 20.0% |
| !! | TTACTAAGTATGCAATAATT+TGG | - | chr2_2:6812578-6812597 | None:intergenic | 20.0% |
| !! | ATCTTTCAAAAAAGAAAGAT+TGG | - | chr2_2:6812648-6812667 | None:intergenic | 20.0% |
| !!! | TAACAGATTTTAAAACCTTT+TGG | - | chr2_2:6812685-6812704 | None:intergenic | 20.0% |
| !! | ATCTGTTATATAAAGTTATC+CGG | + | chr2_2:6812697-6812716 | Msa0234170:intron | 20.0% |
| !!! | GTTTTGTGATGAAATAAAAT+AGG | + | chr2_2:6813078-6813097 | Msa0234170:intron | 20.0% |
| !!! | GATTTTTATTAGCAAGTAAT+TGG | - | chr2_2:6813159-6813178 | None:intergenic | 20.0% |
| !! | ACTTAAAAAATGTTACATAC+CGG | - | chr2_2:6813266-6813285 | None:intergenic | 20.0% |
| ! | TGAATGAATATGCAAAAACT+AGG | - | chr2_2:6811447-6811466 | None:intergenic | 25.0% |
| ! | GATATAAATTCTTGACTTCT+TGG | + | chr2_2:6811508-6811527 | Msa0234170:intron | 25.0% |
| !!! | AAAATAGCTTTTTTTGGTAG+TGG | - | chr2_2:6811852-6811871 | None:intergenic | 25.0% |
| !!! | GCTATTTTTCACATATTTTG+AGG | + | chr2_2:6811864-6811883 | Msa0234170:intron | 25.0% |
| ! | AAAAATCTCTCTTGGTAAAA+AGG | - | chr2_2:6812010-6812029 | None:intergenic | 25.0% |
| ! | ACAACTTAAAATAAAGTGGA+CGG | - | chr2_2:6812175-6812194 | None:intergenic | 25.0% |
| ! | GTGAACAACTTAAAATAAAG+TGG | - | chr2_2:6812179-6812198 | None:intergenic | 25.0% |
| !!! | TTTTTTTAACCAAGTTGCTT+GGG | - | chr2_2:6812475-6812494 | None:intergenic | 25.0% |
| !!! | TTTTTTTTAACCAAGTTGCT+TGG | - | chr2_2:6812476-6812495 | None:intergenic | 25.0% |
| ! | TTGAAAGATAAAGTTATCCA+TGG | + | chr2_2:6812659-6812678 | Msa0234170:intron | 25.0% |
| ! | TATATATGTTTCTCGATTTC+AGG | + | chr2_2:6813363-6813382 | Msa0234170:intron | 25.0% |
| ! | TAGTTCTTGTCAAATTTATC+AGG | - | chr2_2:6813561-6813580 | None:intergenic | 25.0% |
| ! | TCTAATCTTCAAGTGAAAAA+AGG | + | chr2_2:6813585-6813604 | Msa0234170:CDS | 25.0% |
| !! | CTCAAAAAAAGCTTTTTGAT+CGG | - | chr2_2:6813685-6813704 | None:intergenic | 25.0% |
| ! | ATGATCAAAATGGGAAATAT+TGG | + | chr2_2:6813720-6813739 | Msa0234170:CDS | 25.0% |
| !! | TTTCATTTGAAGTGTTTCTT+TGG | + | chr2_2:6813978-6813997 | Msa0234170:three_prime_UTR | 25.0% |
| !! | TTCATTTGAAGTGTTTCTTT+GGG | + | chr2_2:6813979-6813998 | Msa0234170:three_prime_UTR | 25.0% |
| CTATTAGTGGTAGAATGTAT+AGG | - | chr2_2:6811664-6811683 | None:intergenic | 30.0% | |
| !! | TCATTTTTCCAACTCAAGTT+TGG | - | chr2_2:6811714-6811733 | None:intergenic | 30.0% |
| !! | AAAAATAGCTTTGATTCAGC+CGG | - | chr2_2:6811755-6811774 | None:intergenic | 30.0% |
| TGAGTCAAAAAAATCTCTCT+TGG | - | chr2_2:6812018-6812037 | None:intergenic | 30.0% | |
| TCATTTAGAAGCAATAGAGT+TGG | + | chr2_2:6812035-6812054 | Msa0234170:intron | 30.0% | |
| ACTAGTAGTATTTCACGATA+TGG | + | chr2_2:6812076-6812095 | Msa0234170:intron | 30.0% | |
| ATTGGTATATCCGTATAAGA+CGG | + | chr2_2:6812204-6812223 | Msa0234170:intron | 30.0% | |
| TACTGACATGTTACATTCAA+TGG | - | chr2_2:6812254-6812273 | None:intergenic | 30.0% | |
| !!! | ATTTTAAAACCTTTTGGCCA+TGG | - | chr2_2:6812679-6812698 | None:intergenic | 30.0% |
| TGTTATATAAAGTTATCCGG+CGG | + | chr2_2:6812700-6812719 | Msa0234170:intron | 30.0% | |
| GATGAAATAAAATAGGCAGA+TGG | + | chr2_2:6813085-6813104 | Msa0234170:intron | 30.0% | |
| ! | AGTTCATCAGTAGTATTGAA+AGG | - | chr2_2:6813190-6813209 | None:intergenic | 30.0% |
| AAGTAAGTTGTGTTAAGAGT+TGG | - | chr2_2:6813468-6813487 | None:intergenic | 30.0% | |
| TCAAATTTATCAGGAGTTGT+TGG | - | chr2_2:6813552-6813571 | None:intergenic | 30.0% | |
| !! | GAATTTGTTGACAATGCTAA+TGG | - | chr2_2:6813658-6813677 | None:intergenic | 30.0% |
| !!! | AAGCTTTTTTTGAGAGCTTT+AGG | + | chr2_2:6813691-6813710 | Msa0234170:CDS | 30.0% |
| !!! | AGCTTTTTTTGAGAGCTTTA+GGG | + | chr2_2:6813692-6813711 | Msa0234170:CDS | 30.0% |
| ! | ATTGTTTTCTAATCTCTCCT+TGG | - | chr2_2:6813761-6813780 | None:intergenic | 30.0% |
| AATTCAAAATCAGCAGAACT+TGG | + | chr2_2:6813792-6813811 | Msa0234170:CDS | 30.0% | |
| CTCAATGTAAATGTAGTGAT+TGG | + | chr2_2:6813863-6813882 | Msa0234170:exon | 30.0% | |
| ! | CTTTGTGAGCAAAAATCTTT+TGG | + | chr2_2:6813954-6813973 | Msa0234170:three_prime_UTR | 30.0% |
| AGTTGTGCATTTGAAGAGAA+GGG | - | chr2_2:6811276-6811295 | None:intergenic | 35.0% | |
| AAGTTGTGCATTTGAAGAGA+AGG | - | chr2_2:6811277-6811296 | None:intergenic | 35.0% | |
| ! | AACTTGATCCATCCTTTTAC+AGG | + | chr2_2:6811292-6811311 | Msa0234170:CDS | 35.0% |
| CGAACAATGGAACTAACATT+TGG | - | chr2_2:6811327-6811346 | None:intergenic | 35.0% | |
| TATACCTACCAAACTTGAGT+TGG | + | chr2_2:6811703-6811722 | Msa0234170:intron | 35.0% | |
| ! | TTTTCCAACTCAAGTTTGGT+AGG | - | chr2_2:6811710-6811729 | None:intergenic | 35.0% |
| !! | AAAATAGCTTTGATTCAGCC+GGG | - | chr2_2:6811754-6811773 | None:intergenic | 35.0% |
| GCATAAAAATATGCAAGGTC+CGG | + | chr2_2:6811812-6811831 | Msa0234170:intron | 35.0% | |
| CATAAAAATATGCAAGGTCC+GGG | + | chr2_2:6811813-6811832 | Msa0234170:intron | 35.0% | |
| CTTAAAATAAAGTGGACGGT+GGG | - | chr2_2:6812171-6812190 | None:intergenic | 35.0% | |
| ACTTAAAATAAAGTGGACGG+TGG | - | chr2_2:6812172-6812191 | None:intergenic | 35.0% | |
| !!! | TTTTTTTCTTCCTTTCGCAC+CGG | + | chr2_2:6812327-6812346 | Msa0234170:intron | 35.0% |
| TAAAGTTATCCATGGCCAAA+AGG | + | chr2_2:6812667-6812686 | Msa0234170:intron | 35.0% | |
| CCTCTTAATGAGTTTCTGTT+TGG | - | chr2_2:6812865-6812884 | None:intergenic | 35.0% | |
| CCAAACAGAAACTCATTAAG+AGG | + | chr2_2:6812862-6812881 | Msa0234170:CDS | 35.0% | |
| CAGAAACTCATTAAGAGGTT+TGG | + | chr2_2:6812867-6812886 | Msa0234170:CDS | 35.0% | |
| GAATCAAATCAAAACAGCTG+TGG | + | chr2_2:6812897-6812916 | Msa0234170:CDS | 35.0% | |
| AATCAAAACAGCTGTGGAAA+AGG | + | chr2_2:6812903-6812922 | Msa0234170:CDS | 35.0% | |
| TGCTGAATTATCATCTACAC+TGG | + | chr2_2:6812969-6812988 | Msa0234170:CDS | 35.0% | |
| AAACCATCTCTTCTTCCTAA+AGG | - | chr2_2:6813127-6813146 | None:intergenic | 35.0% | |
| ! | ATTTCAGGTGCTCATACATT+TGG | + | chr2_2:6813378-6813397 | Msa0234170:intron | 35.0% |
| AGTTGTGTTAAGAGTTGGAT+CGG | - | chr2_2:6813463-6813482 | None:intergenic | 35.0% | |
| TTGTTGGATCGAAATTGGTA+AGG | - | chr2_2:6813536-6813555 | None:intergenic | 35.0% | |
| GGAAATATTGGTGTGTTAAC+CGG | + | chr2_2:6813732-6813751 | Msa0234170:CDS | 35.0% | |
| GAAATATTGGTGTGTTAACC+GGG | + | chr2_2:6813733-6813752 | Msa0234170:CDS | 35.0% | |
| GCTATAACTATGCACATTCA+TGG | + | chr2_2:6813907-6813926 | Msa0234170:three_prime_UTR | 35.0% | |
| !! | AATAGCTTTGTGCTGTGTAG+TGG | + | chr2_2:6811233-6811252 | Msa0234170:CDS | 40.0% |
| CAAGTGTTCCTGTAAAAGGA+TGG | - | chr2_2:6811303-6811322 | None:intergenic | 40.0% | |
| TGGACAAGTGTTCCTGTAAA+AGG | - | chr2_2:6811307-6811326 | None:intergenic | 40.0% | |
| CCTTATGACTTCACGAACAA+TGG | - | chr2_2:6811340-6811359 | None:intergenic | 40.0% | |
| CCATTGTTCGTGAAGTCATA+AGG | + | chr2_2:6811337-6811356 | Msa0234170:CDS | 40.0% | |
| CACGTACAATGAGCAAAACA+GGG | - | chr2_2:6811485-6811504 | None:intergenic | 40.0% | |
| ACACGTACAATGAGCAAAAC+AGG | - | chr2_2:6811486-6811505 | None:intergenic | 40.0% | |
| !! | GAATGTATAGGAGCATCACA+AGG | - | chr2_2:6811652-6811671 | None:intergenic | 40.0% |
| !!! | TAGCTTTTTTTGGTAGTGGC+CGG | - | chr2_2:6811848-6811867 | None:intergenic | 40.0% |
| AAAACTCAGTATCCGATCCA+AGG | + | chr2_2:6812122-6812141 | Msa0234170:intron | 40.0% | |
| GTGTTGAATGATTAGTGCTG+AGG | - | chr2_2:6812509-6812528 | None:intergenic | 40.0% | |
| ATGTGATCCATGATTGCAAC+AGG | + | chr2_2:6812777-6812796 | Msa0234170:intron | 40.0% | |
| TGTGATCCATGATTGCAACA+GGG | + | chr2_2:6812778-6812797 | Msa0234170:intron | 40.0% | |
| AGCATCTTGTTCACTCACAA+CGG | - | chr2_2:6812839-6812858 | None:intergenic | 40.0% | |
| TCAGCACAAGAAACTGTGTT+AGG | - | chr2_2:6812934-6812953 | None:intergenic | 40.0% | |
| ! | GTTCCTTTAGGAAGAAGAGA+TGG | + | chr2_2:6813121-6813140 | Msa0234170:CDS | 40.0% |
| ! | TCAGTAGTATTGAAAGGAGC+TGG | - | chr2_2:6813184-6813203 | None:intergenic | 40.0% |
| TACCGCTGAAGTTGTACAAT+CGG | - | chr2_2:6813431-6813450 | None:intergenic | 40.0% | |
| ATTGTACAACTTCAGCGGTA+CGG | + | chr2_2:6813431-6813450 | Msa0234170:CDS | 40.0% | |
| GTTGTGTTAAGAGTTGGATC+GGG | - | chr2_2:6813462-6813481 | None:intergenic | 40.0% | |
| AGGAGTTGTTGGATCGAAAT+TGG | - | chr2_2:6813541-6813560 | None:intergenic | 40.0% | |
| CAAGAGTTGTTCTCAACATC+TGG | + | chr2_2:6813624-6813643 | Msa0234170:CDS | 40.0% | |
| TAGGGCTGCTATGATCAAAA+TGG | + | chr2_2:6813710-6813729 | Msa0234170:CDS | 40.0% | |
| AGGGCTGCTATGATCAAAAT+GGG | + | chr2_2:6813711-6813730 | Msa0234170:CDS | 40.0% | |
| ACAAGACTAGCAAGCATACG+AGG | - | chr2_2:6811381-6811400 | None:intergenic | 45.0% | |
| !! | GTATGCTTGCTAGTCTTGTC+AGG | + | chr2_2:6811382-6811401 | Msa0234170:CDS | 45.0% |
| !!! | AGCTTTTTTTGGTAGTGGCC+GGG | - | chr2_2:6811847-6811866 | None:intergenic | 45.0% |
| !! | GATTTGTCCCTCGGATTAGT+CGG | - | chr2_2:6812149-6812168 | None:intergenic | 45.0% |
| GGTATATCCGTATAAGACGG+TGG | + | chr2_2:6812207-6812226 | Msa0234170:intron | 45.0% | |
| GTTCGAACCACCGTCTTATA+CGG | - | chr2_2:6812217-6812236 | None:intergenic | 45.0% | |
| TCACAACCCTGTTGCAATCA+TGG | - | chr2_2:6812787-6812806 | None:intergenic | 45.0% | |
| ! | AAAGCTGCATTTGCTGCTCA+AGG | + | chr2_2:6813211-6813230 | Msa0234170:CDS | 45.0% |
| AGGTCTCGATACTACTGATC+TGG | + | chr2_2:6813231-6813250 | Msa0234170:CDS | 45.0% | |
| AGCCGATTGTACAACTTCAG+CGG | + | chr2_2:6813426-6813445 | Msa0234170:CDS | 45.0% | |
| TTGTACAACTTCAGCGGTAC+GGG | + | chr2_2:6813432-6813451 | Msa0234170:CDS | 45.0% | |
| TTGCGCACAATATGTCCCAA+TGG | + | chr2_2:6813495-6813514 | Msa0234170:CDS | 45.0% | |
| AAATTGGTAAGGTTCGTGCC+AGG | - | chr2_2:6813525-6813544 | None:intergenic | 45.0% | |
| TCTAATCTCTCCTTGGTTCC+CGG | - | chr2_2:6813754-6813773 | None:intergenic | 45.0% | |
| TCAGCAGATTCATCTGAGGA+GGG | + | chr2_2:6813831-6813850 | Msa0234170:CDS | 45.0% | |
| AGATTCATCTGAGGAGGGTA+TGG | + | chr2_2:6813836-6813855 | Msa0234170:CDS | 45.0% | |
| !! | ATATAATATAAATTAGAATA+AGG | + | chr2_2:6811592-6811611 | Msa0234170:intron | 5.0% |
| TGCTGTGTAGTGGTTGTGCT+TGG | + | chr2_2:6811243-6811262 | Msa0234170:CDS | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | chr2_2:6811784-6811803 | Msa0234170:intron | 50.0% | |
| !!! | GCTTTTTTTGGTAGTGGCCG+GGG | - | chr2_2:6811846-6811865 | None:intergenic | 50.0% |
| !! | GGATTAGTCGGTCCTTGGAT+CGG | - | chr2_2:6812137-6812156 | None:intergenic | 50.0% |
| ! | TTTTCTTCCTTTCGCACCGG+TGG | + | chr2_2:6812330-6812349 | Msa0234170:intron | 50.0% |
| CTAATCCGGCTCATGCATAG+AGG | + | chr2_2:6812360-6812379 | Msa0234170:intron | 50.0% | |
| AATACCGGGTTCGATTCCCA+GGG | - | chr2_2:6812412-6812431 | None:intergenic | 50.0% | |
| GTGCACATTATTGTAGCCGC+CGG | - | chr2_2:6812719-6812738 | None:intergenic | 50.0% | |
| AATAGGCAGATGGTCCTGAC+TGG | + | chr2_2:6813095-6813114 | Msa0234170:intron | 50.0% | |
| CCTAAAGGAACCTTCCAGTC+AGG | - | chr2_2:6813112-6813131 | None:intergenic | 50.0% | |
| CCTGACTGGAAGGTTCCTTT+AGG | + | chr2_2:6813109-6813128 | Msa0234170:CDS | 50.0% | |
| ACTGATCTGGTTGCACTCTC+CGG | + | chr2_2:6813244-6813263 | Msa0234170:CDS | 50.0% | |
| CGCACAATATGTCCCAATGG+TGG | + | chr2_2:6813498-6813517 | Msa0234170:CDS | 50.0% | |
| !! | ATATGTCCCAATGGTGGACC+TGG | + | chr2_2:6813504-6813523 | Msa0234170:CDS | 50.0% |
| TGCCTCAGCAGATTCATCTG+AGG | + | chr2_2:6813827-6813846 | Msa0234170:CDS | 50.0% | |
| CTCCTCAGATGAATCTGCTG+AGG | - | chr2_2:6813832-6813851 | None:intergenic | 50.0% | |
| CTCAGCAGATTCATCTGAGG+AGG | + | chr2_2:6813830-6813849 | Msa0234170:CDS | 50.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr2_2:6811783-6811802 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr2_2:6811780-6811799 | Msa0234170:intron | 55.0% | |
| TCCAAGGACCGACTAATCCG+AGG | + | chr2_2:6812138-6812157 | Msa0234170:intron | 55.0% | |
| CCAAGGACCGACTAATCCGA+GGG | + | chr2_2:6812139-6812158 | Msa0234170:intron | 55.0% | |
| GCATGCCTCTATGCATGAGC+CGG | - | chr2_2:6812368-6812387 | None:intergenic | 55.0% | |
| ! | ATGCATAGAGGCATGCGCAC+TGG | + | chr2_2:6812372-6812391 | Msa0234170:intron | 55.0% |
| TTCCCAGGGGGAACAACTCT+TGG | - | chr2_2:6812398-6812417 | None:intergenic | 55.0% | |
| ATACCGGGTTCGATTCCCAG+GGG | - | chr2_2:6812411-6812430 | None:intergenic | 55.0% | |
| GAATACCGGGTTCGATTCCC+AGG | - | chr2_2:6812413-6812432 | None:intergenic | 55.0% | |
| GAATCGAACCCGGTATTCCC+CGG | + | chr2_2:6812415-6812434 | Msa0234170:intron | 55.0% | |
| AATCGAACCCGGTATTCCCC+GGG | + | chr2_2:6812416-6812435 | Msa0234170:intron | 55.0% | |
| TTCGTGCCAGGTCCACCATT+GGG | - | chr2_2:6813513-6813532 | None:intergenic | 55.0% | |
| GGTGTGTTAACCGGGAACCA+AGG | + | chr2_2:6813741-6813760 | Msa0234170:CDS | 55.0% | |
| AAGGTCCGGGCTTCAAACCC+CGG | + | chr2_2:6811826-6811845 | Msa0234170:intron | 60.0% | |
| !! | CCCTCGGATTAGTCGGTCCT+TGG | - | chr2_2:6812142-6812161 | None:intergenic | 60.0% |
| GGACGGTGGGATTTGTCCCT+CGG | - | chr2_2:6812158-6812177 | None:intergenic | 60.0% | |
| !! | CCGGATTAGTCGTGCACCAC+CGG | - | chr2_2:6812349-6812368 | None:intergenic | 60.0% |
| CCGGTGGTGCACGACTAATC+CGG | + | chr2_2:6812346-6812365 | Msa0234170:intron | 60.0% | |
| TGGCCAAGAGTTGTTCCCCC+TGG | + | chr2_2:6812392-6812411 | Msa0234170:intron | 60.0% | |
| GGCCAAGAGTTGTTCCCCCT+GGG | + | chr2_2:6812393-6812412 | Msa0234170:intron | 60.0% | |
| TTCCCCCTGGGAATCGAACC+CGG | + | chr2_2:6812405-6812424 | Msa0234170:intron | 60.0% | |
| TACCGGGTTCGATTCCCAGG+GGG | - | chr2_2:6812410-6812429 | None:intergenic | 60.0% | |
| GTGGCAAGGAGCTCCTTCCA+AGG | - | chr2_2:6812447-6812466 | None:intergenic | 60.0% | |
| TGGAAGGAGCTCCTTGCCAC+TGG | + | chr2_2:6812447-6812466 | Msa0234170:intron | 60.0% | |
| TTGCTTGGGCTCCAGTGGCA+AGG | - | chr2_2:6812461-6812480 | None:intergenic | 60.0% | |
| CCAAGTTGCTTGGGCTCCAG+TGG | - | chr2_2:6812466-6812485 | None:intergenic | 60.0% | |
| CCACTGGAGCCCAAGCAACT+TGG | + | chr2_2:6812463-6812482 | Msa0234170:intron | 60.0% | |
| GGCAGATGGTCCTGACTGGA+AGG | + | chr2_2:6813099-6813118 | Msa0234170:intron | 60.0% | |
| GTTCGTGCCAGGTCCACCAT+TGG | - | chr2_2:6813514-6813533 | None:intergenic | 60.0% | |
| ! | AGTGGCCGGGGTTTGAAGCC+CGG | - | chr2_2:6811834-6811853 | None:intergenic | 65.0% |
| TCGTGCACCACCGGTGCGAA+AGG | - | chr2_2:6812340-6812359 | None:intergenic | 65.0% | |
| AGGACGTGCCCGGGGAATAC+CGG | - | chr2_2:6812427-6812446 | None:intergenic | 65.0% | |
| GTATTCCCCGGGCACGTCCT+TGG | + | chr2_2:6812427-6812446 | Msa0234170:intron | 65.0% | |
| TCCTTCCAAGGACGTGCCCG+GGG | - | chr2_2:6812435-6812454 | None:intergenic | 65.0% | |
| CTCCTTCCAAGGACGTGCCC+GGG | - | chr2_2:6812436-6812455 | None:intergenic | 65.0% | |
| GCTCCTTCCAAGGACGTGCC+CGG | - | chr2_2:6812437-6812456 | None:intergenic | 65.0% | |
| GGACGTGCCCGGGGAATACC+GGG | - | chr2_2:6812426-6812445 | None:intergenic | 70.0% | |
| TCCCCGGGCACGTCCTTGGA+AGG | + | chr2_2:6812431-6812450 | Msa0234170:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 6811117 | 6814076 | 6811117 | ID=Msa0234170;Name=Msa0234170 |
| chr2_2 | mRNA | 6811117 | 6814076 | 6811117 | ID=Msa0234170-mRNA-1;Parent=Msa0234170;Name=Msa0234170-mRNA-1;_AED=0.28;_eAED=0.28;_QI=93|1|1|1|1|1|4|204|355 |
| chr2_2 | exon | 6811117 | 6811431 | 6811117 | ID=Msa0234170-mRNA-1:exon:2964;Parent=Msa0234170-mRNA-1 |
| chr2_2 | exon | 6812799 | 6812990 | 6812799 | ID=Msa0234170-mRNA-1:exon:2965;Parent=Msa0234170-mRNA-1 |
| chr2_2 | exon | 6813100 | 6813265 | 6813100 | ID=Msa0234170-mRNA-1:exon:2966;Parent=Msa0234170-mRNA-1 |
| chr2_2 | exon | 6813385 | 6814076 | 6813385 | ID=Msa0234170-mRNA-1:exon:2967;Parent=Msa0234170-mRNA-1 |
| chr2_2 | five_prime_UTR | 6811117 | 6811209 | 6811117 | ID=Msa0234170-mRNA-1:five_prime_utr;Parent=Msa0234170-mRNA-1 |
| chr2_2 | CDS | 6811210 | 6811431 | 6811210 | ID=Msa0234170-mRNA-1:cds;Parent=Msa0234170-mRNA-1 |
| chr2_2 | CDS | 6812799 | 6812990 | 6812799 | ID=Msa0234170-mRNA-1:cds;Parent=Msa0234170-mRNA-1 |
| chr2_2 | CDS | 6813100 | 6813265 | 6813100 | ID=Msa0234170-mRNA-1:cds;Parent=Msa0234170-mRNA-1 |
| chr2_2 | CDS | 6813385 | 6813872 | 6813385 | ID=Msa0234170-mRNA-1:cds;Parent=Msa0234170-mRNA-1 |
| chr2_2 | three_prime_UTR | 6813873 | 6814076 | 6813873 | ID=Msa0234170-mRNA-1:three_prime_utr;Parent=Msa0234170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
