Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213040 | sp|Q9FME2|NTF2_ARATH | 47.333 | 450 | 187 | 14 | 1 | 421 | 1 | 429 | 1.94e-94 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213040 | A0A072URQ4 | 92.857 | 462 | 10 | 2 | 1 | 440 | 1 | 461 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024400 | Msa1213040 | 0.804078 | 2.567592e-49 | -8.615850e-47 |
| Msa0026780 | Msa1213040 | 0.829231 | 5.777494e-55 | -8.615850e-47 |
| Msa0033220 | Msa1213040 | 0.809912 | 1.496738e-50 | -8.615850e-47 |
| Msa0046870 | Msa1213040 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0063940 | Msa1213040 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa0077340 | Msa1213040 | 0.803874 | 2.831097e-49 | -8.615850e-47 |
| Msa0091730 | Msa1213040 | 0.809512 | 1.824047e-50 | -8.615850e-47 |
| Msa0098240 | Msa1213040 | 0.830472 | 2.880932e-55 | -8.615850e-47 |
| Msa0120280 | Msa1213040 | 0.800773 | 1.231567e-48 | -8.615850e-47 |
| Msa0610690 | Msa1213040 | 0.821406 | 4.105746e-53 | -8.615850e-47 |
| Msa0611640 | Msa1213040 | 0.827991 | 1.152177e-54 | -8.615850e-47 |
| Msa0626460 | Msa1213040 | 0.813338 | 2.691860e-51 | -8.615850e-47 |
| Msa0630770 | Msa1213040 | -0.815626 | 8.397090e-52 | -8.615850e-47 |
| Msa0657110 | Msa1213040 | -0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0693330 | Msa1213040 | 0.851272 | 9.885944e-61 | -8.615850e-47 |
| Msa0702720 | Msa1213040 | 0.815515 | 8.888059e-52 | -8.615850e-47 |
| Msa0703950 | Msa1213040 | 0.828605 | 8.191289e-55 | -8.615850e-47 |
| Msa0712860 | Msa1213040 | 0.826079 | 3.302502e-54 | -8.615850e-47 |
| Msa0720740 | Msa1213040 | 0.807083 | 6.011414e-50 | -8.615850e-47 |
| Msa0721930 | Msa1213040 | 0.815105 | 1.095983e-51 | -8.615850e-47 |
| Msa0733080 | Msa1213040 | 0.808314 | 3.291952e-50 | -8.615850e-47 |
| Msa0752450 | Msa1213040 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0761310 | Msa1213040 | 0.802971 | 4.355284e-49 | -8.615850e-47 |
| Msa0762930 | Msa1213040 | 0.814259 | 1.687496e-51 | -8.615850e-47 |
| Msa0795750 | Msa1213040 | 0.818037 | 2.415149e-52 | -8.615850e-47 |
| Msa0800480 | Msa1213040 | 0.830350 | 3.086044e-55 | -8.615850e-47 |
| Msa0805390 | Msa1213040 | 0.853297 | 2.622511e-61 | -8.615850e-47 |
| Msa0831740 | Msa1213040 | 0.840660 | 7.607271e-58 | -8.615850e-47 |
| Msa0832520 | Msa1213040 | 0.803606 | 3.217860e-49 | -8.615850e-47 |
| Msa0122530 | Msa1213040 | 0.813544 | 2.426202e-51 | -8.615850e-47 |
| Msa0124910 | Msa1213040 | 0.803333 | 3.664953e-49 | -8.615850e-47 |
| Msa0177320 | Msa1213040 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0197170 | Msa1213040 | 0.803304 | 3.716574e-49 | -8.615850e-47 |
| Msa0209140 | Msa1213040 | 0.823147 | 1.619940e-53 | -8.615850e-47 |
| Msa0215990 | Msa1213040 | 0.827381 | 1.614149e-54 | -8.615850e-47 |
| Msa0219280 | Msa1213040 | 0.810985 | 8.779229e-51 | -8.615850e-47 |
| Msa0224110 | Msa1213040 | 0.808472 | 3.045967e-50 | -8.615850e-47 |
| Msa0237300 | Msa1213040 | 0.823365 | 1.440643e-53 | -8.615850e-47 |
| Msa0377820 | Msa1213040 | 0.809967 | 1.456397e-50 | -8.615850e-47 |
| Msa0385830 | Msa1213040 | 0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa0386880 | Msa1213040 | 0.807347 | 5.283825e-50 | -8.615850e-47 |
| Msa0412790 | Msa1213040 | 0.818576 | 1.824242e-52 | -8.615850e-47 |
| Msa0423550 | Msa1213040 | 0.834733 | 2.527120e-56 | -8.615850e-47 |
| Msa0439960 | Msa1213040 | 0.859121 | 5.148955e-63 | -8.615850e-47 |
| Msa0465500 | Msa1213040 | 0.844599 | 6.840634e-59 | -8.615850e-47 |
| Msa0472930 | Msa1213040 | 0.823056 | 1.700555e-53 | -8.615850e-47 |
| Msa0478430 | Msa1213040 | 0.814563 | 1.445633e-51 | -8.615850e-47 |
| Msa0992510 | Msa1213040 | 0.805648 | 1.206021e-49 | -8.615850e-47 |
| Msa0993190 | Msa1213040 | 0.825026 | 5.867527e-54 | -8.615850e-47 |
| Msa1032470 | Msa1213040 | 0.813254 | 2.808929e-51 | -8.615850e-47 |
| Msa1106590 | Msa1213040 | 0.818554 | 1.845193e-52 | -8.615850e-47 |
| Msa0238950 | Msa1213040 | 0.803065 | 4.165206e-49 | -8.615850e-47 |
| Msa0274720 | Msa1213040 | 0.843825 | 1.104237e-58 | -8.615850e-47 |
| Msa0288620 | Msa1213040 | 0.801898 | 7.244952e-49 | -8.615850e-47 |
| Msa0291150 | Msa1213040 | 0.802652 | 5.069247e-49 | -8.615850e-47 |
| Msa0308750 | Msa1213040 | 0.810129 | 1.343988e-50 | -8.615850e-47 |
| Msa0309970 | Msa1213040 | 0.801245 | 9.861253e-49 | -8.615850e-47 |
| Msa0315520 | Msa1213040 | 0.855730 | 5.183593e-62 | -8.615850e-47 |
| Msa0316740 | Msa1213040 | 0.810176 | 1.312913e-50 | -8.615850e-47 |
| Msa0319920 | Msa1213040 | 0.813405 | 2.602471e-51 | -8.615850e-47 |
| Msa0326710 | Msa1213040 | 0.828661 | 7.940187e-55 | -8.615850e-47 |
| Msa1129330 | Msa1213040 | 0.810047 | 1.399335e-50 | -8.615850e-47 |
| Msa1161480 | Msa1213040 | 0.843427 | 1.410846e-58 | -8.615850e-47 |
| Msa1190100 | Msa1213040 | -0.803508 | 3.370886e-49 | -8.615850e-47 |
| Msa1197720 | Msa1213040 | 0.818710 | 1.700925e-52 | -8.615850e-47 |
| Msa1207920 | Msa1213040 | -0.814870 | 1.236117e-51 | -8.615850e-47 |
| Msa1212830 | Msa1213040 | 0.963532 | 3.353601e-122 | -8.615850e-47 |
| Msa1213040 | Msa1228040 | 0.818792 | 1.629349e-52 | -8.615850e-47 |
| Msa1213040 | Msa1251410 | 0.833760 | 4.430436e-56 | -8.615850e-47 |
| Msa1213040 | Msa1254910 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa1213040 | Msa1260220 | 0.959670 | 1.067958e-117 | -8.615850e-47 |
| Msa1213040 | Msa1292020 | 0.831816 | 1.347067e-55 | -8.615850e-47 |
| Msa1213040 | Msa1300100 | 0.875509 | 2.913633e-68 | -8.615850e-47 |
| Msa1213040 | Msa1306250 | 0.817947 | 2.531841e-52 | -8.615850e-47 |
| Msa1213040 | Msa1331570 | -0.821439 | 4.034901e-53 | -8.615850e-47 |
| Msa1213040 | Msa1341300 | 0.817786 | 2.753209e-52 | -8.615850e-47 |
| Msa1213040 | Msa1341840 | 0.801575 | 8.439919e-49 | -8.615850e-47 |
| Msa1213040 | Msa1351990 | 0.814705 | 1.344381e-51 | -8.615850e-47 |
| Msa1213040 | Msa1365820 | 0.841213 | 5.446718e-58 | -8.615850e-47 |
| Msa1213040 | Msa1368390 | 0.828010 | 1.140177e-54 | -8.615850e-47 |
| Msa1213040 | Msa1372000 | 0.826711 | 2.335158e-54 | -8.615850e-47 |
| Msa1213040 | Msa1381260 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
| Msa1213040 | Msa1396200 | -0.810569 | 1.080027e-50 | -8.615850e-47 |
| Msa1213040 | Msa1407840 | 0.829749 | 4.324523e-55 | -8.615850e-47 |
| Msa1213040 | Msa1422860 | 0.806550 | 7.789563e-50 | -8.615850e-47 |
| Msa1213040 | Msa1437810 | 0.831433 | 1.673970e-55 | -8.615850e-47 |
| Msa1213040 | Msa1454500 | 0.839583 | 1.452972e-57 | -8.615850e-47 |
| Msa1213040 | Msa1457770 | 0.820166 | 7.918314e-53 | -8.615850e-47 |
| Msa1213040 | Msa1461370 | 0.811323 | 7.414190e-51 | -8.615850e-47 |
| Msa1213040 | Msa1464090 | 0.800264 | 1.563533e-48 | -8.615850e-47 |
| Msa0511440 | Msa1213040 | 0.840563 | 8.065309e-58 | -8.615850e-47 |
| Msa0537760 | Msa1213040 | 0.808661 | 2.774914e-50 | -8.615850e-47 |
| Msa0563440 | Msa1213040 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0579080 | Msa1213040 | 0.818377 | 2.022998e-52 | -8.615850e-47 |
| Msa0579160 | Msa1213040 | 0.832446 | 9.411860e-56 | -8.615850e-47 |
| Msa0579220 | Msa1213040 | 0.840224 | 9.889982e-58 | -8.615850e-47 |
| Msa0842750 | Msa1213040 | 0.841210 | 5.456236e-58 | -8.615850e-47 |
| Msa0851850 | Msa1213040 | 0.818409 | 1.990018e-52 | -8.615850e-47 |
| Msa0928180 | Msa1213040 | 0.863676 | 2.100358e-64 | -8.615850e-47 |
| Msa0964020 | Msa1213040 | 0.814655 | 1.379683e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213040 | MtrunA17_Chr4g0061541 | 91.185 | 363 | 9 | 2 | 1 | 341 | 3 | 364 | 0.0 | 661 |
| Msa1213040 | MtrunA17_Chr7g0219091 | 45.297 | 404 | 178 | 12 | 16 | 381 | 1 | 399 | 5.20e-95 | 293 |
| Msa1213040 | MtrunA17_Chr7g0235151 | 38.696 | 460 | 227 | 13 | 12 | 433 | 10 | 452 | 5.20e-79 | 254 |
| Msa1213040 | MtrunA17_Chr4g0043211 | 38.320 | 488 | 205 | 18 | 1 | 423 | 1 | 457 | 2.83e-67 | 222 |
| Msa1213040 | MtrunA17_Chr4g0061531 | 98.990 | 99 | 1 | 0 | 342 | 440 | 2 | 100 | 4.09e-61 | 193 |
| Msa1213040 | MtrunA17_Chr1g0168741 | 29.374 | 463 | 256 | 12 | 17 | 420 | 14 | 464 | 1.70e-38 | 145 |
| Msa1213040 | MtrunA17_Chr7g0262051 | 31.663 | 439 | 247 | 18 | 17 | 411 | 13 | 442 | 9.12e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213040 | AT5G60980.4 | 47.439 | 449 | 187 | 13 | 1 | 421 | 1 | 428 | 3.49e-97 | 299 |
| Msa1213040 | AT5G60980.1 | 47.439 | 449 | 187 | 13 | 1 | 421 | 1 | 428 | 3.49e-97 | 299 |
| Msa1213040 | AT5G60980.2 | 47.333 | 450 | 187 | 14 | 1 | 421 | 1 | 429 | 1.98e-95 | 295 |
| Msa1213040 | AT5G60980.3 | 47.333 | 450 | 187 | 14 | 1 | 421 | 1 | 429 | 1.98e-95 | 295 |
| Msa1213040 | AT3G25150.1 | 37.097 | 434 | 196 | 12 | 8 | 399 | 10 | 408 | 1.92e-65 | 218 |
| Msa1213040 | AT3G25150.2 | 37.097 | 434 | 196 | 12 | 8 | 399 | 109 | 507 | 2.10e-64 | 218 |
| Msa1213040 | AT2G03640.5 | 32.477 | 428 | 232 | 16 | 9 | 405 | 5 | 406 | 3.12e-50 | 176 |
| Msa1213040 | AT2G03640.1 | 32.477 | 428 | 232 | 16 | 9 | 405 | 5 | 406 | 3.12e-50 | 176 |
| Msa1213040 | AT2G03640.3 | 32.477 | 428 | 232 | 16 | 9 | 405 | 5 | 406 | 3.12e-50 | 176 |
| Msa1213040 | AT2G03640.2 | 32.944 | 428 | 231 | 16 | 9 | 405 | 5 | 407 | 4.59e-50 | 176 |
| Msa1213040 | AT1G69250.1 | 32.620 | 374 | 215 | 12 | 6 | 357 | 2 | 360 | 2.31e-47 | 168 |
| Msa1213040 | AT5G48650.1 | 33.256 | 430 | 227 | 17 | 14 | 395 | 13 | 430 | 9.52e-47 | 167 |
| Msa1213040 | AT2G03640.4 | 30.110 | 455 | 238 | 15 | 9 | 405 | 5 | 437 | 4.63e-46 | 166 |
| Msa1213040 | AT1G13730.2 | 32.581 | 399 | 227 | 12 | 1 | 384 | 1 | 372 | 4.64e-46 | 165 |
| Msa1213040 | AT1G13730.1 | 32.581 | 399 | 227 | 12 | 1 | 384 | 1 | 372 | 4.64e-46 | 165 |
| Msa1213040 | AT1G69250.2 | 32.722 | 327 | 189 | 10 | 10 | 320 | 6 | 317 | 2.42e-37 | 140 |
| Msa1213040 | AT5G43960.1 | 31.078 | 399 | 214 | 16 | 11 | 357 | 3 | 392 | 3.05e-31 | 125 |
| Msa1213040 | AT3G07250.1 | 25.765 | 392 | 251 | 13 | 12 | 385 | 5 | 374 | 1.33e-21 | 98.2 |
| Msa1213040 | AT5G43960.2 | 39.130 | 161 | 78 | 5 | 214 | 357 | 176 | 333 | 1.06e-20 | 94.0 |
| Msa1213040 | AT3G24463.1 | 40.594 | 101 | 54 | 4 | 15 | 110 | 9 | 108 | 1.67e-14 | 70.5 |
Find 160 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAATTGGTATACTAAAT+TGG | 0.099031 | 8_1:-73057190 | Msa1213040:three_prime_UTR |
| TAAACTTCATCACCATTATT+AGG | 0.140835 | 8_1:+73060539 | None:intergenic |
| GTTTCCGAGGCGAGGGTTTC+CGG | 0.175478 | 8_1:-73057811 | Msa1213040:CDS |
| AGTTCAATTGTTGCATTAAA+TGG | 0.198571 | 8_1:+73059886 | None:intergenic |
| TTAGTTACTGGATGCTTAAC+TGG | 0.242440 | 8_1:-73060896 | Msa1213040:CDS |
| TTTCAGCATGGGTTCTGTTT+TGG | 0.246084 | 8_1:-73059711 | Msa1213040:intron |
| TTTGGTGGTGGACGAGGTTT+TGG | 0.272425 | 8_1:-73057776 | Msa1213040:CDS |
| TGGACTCCACCATGCTTAAT+AGG | 0.272831 | 8_1:+73059835 | None:intergenic |
| AAACTTCATCACCATTATTA+GGG | 0.277499 | 8_1:+73060540 | None:intergenic |
| CGCCACTCTTGCAGCTCGGC+TGG | 0.292730 | 8_1:+73060239 | None:intergenic |
| GCCTTTGCTTCAGTTGAAAT+TGG | 0.292821 | 8_1:-73057203 | Msa1213040:three_prime_UTR |
| AATAATGTCATCAATGAAAA+TGG | 0.295322 | 8_1:-73060740 | Msa1213040:CDS |
| CTTGGTGCACAGGTTCTATC+AGG | 0.310789 | 8_1:-73061789 | Msa1213040:CDS |
| TCATCCTCTGCAGAGGTTGC+AGG | 0.311559 | 8_1:+73060566 | None:intergenic |
| TGGCAAGTTCCGTATATATA+TGG | 0.319559 | 8_1:+73059906 | None:intergenic |
| CTGTACAATCTTCATAGTTC+AGG | 0.328630 | 8_1:+73060972 | None:intergenic |
| AGTTGTCTCTCCCTCTATCT+TGG | 0.328655 | 8_1:+73062817 | None:intergenic |
| TTTCCGAGGCGAGGGTTTCC+GGG | 0.337841 | 8_1:-73057810 | Msa1213040:CDS |
| AAGCCATACTAACCTGATTC+TGG | 0.350527 | 8_1:+73060701 | None:intergenic |
| TGTAATAAGCTCAAAGGAAA+TGG | 0.353479 | 8_1:-73057280 | Msa1213040:three_prime_UTR |
| AGACCTTACTGCTTCTTACT+TGG | 0.360516 | 8_1:+73059815 | None:intergenic |
| GGGTAGATGGTGTAACATTA+TGG | 0.367114 | 8_1:+73057648 | None:intergenic |
| TGAAATTGGTATACTAAATT+GGG | 0.375082 | 8_1:-73057189 | Msa1213040:three_prime_UTR |
| TGAGGACTAGGAGTAGTAGA+AGG | 0.392176 | 8_1:+73061869 | None:intergenic |
| GAGATTCTGTTGTGAAGGTT+TGG | 0.393660 | 8_1:+73062790 | None:intergenic |
| TATGCTCACACTGGGGTAGA+TGG | 0.396834 | 8_1:+73057635 | None:intergenic |
| CGTGGTGGACGCCATGGTGT+GGG | 0.400855 | 8_1:-73057674 | Msa1213040:CDS |
| GAGGATGAAAACCCTAATAA+TGG | 0.402358 | 8_1:-73060551 | Msa1213040:CDS |
| TCTCATAGGACAAGTCAAAA+TGG | 0.403541 | 8_1:-73057704 | Msa1213040:CDS |
| CATCAATATACACCTTCTTC+AGG | 0.411054 | 8_1:+73060114 | None:intergenic |
| CGGAAGAGGGAGGCATCCTT+CGG | 0.427046 | 8_1:-73057843 | Msa1213040:CDS |
| GGTAGCATGCCGTTGTTCAT+TGG | 0.428270 | 8_1:+73060206 | None:intergenic |
| ATGAAAAGTAACACAGCATC+TGG | 0.431023 | 8_1:-73060276 | Msa1213040:CDS |
| TCATTCTCACTTAGATCATT+AGG | 0.431566 | 8_1:+73060458 | None:intergenic |
| TAGAACCTGTGCACCAAGTC+AGG | 0.435047 | 8_1:+73061794 | None:intergenic |
| TTCTGTGCAAAATGCACTTA+AGG | 0.437793 | 8_1:-73059664 | Msa1213040:intron |
| GCTGTGCACATGCCAGAATC+AGG | 0.445218 | 8_1:-73060713 | Msa1213040:intron |
| AAAATGTATAGTAGCTAAGT+AGG | 0.445773 | 8_1:-73062907 | Msa1213040:five_prime_UTR |
| TCTCTCCCTCTATCTTGGTT+CGG | 0.449609 | 8_1:+73062822 | None:intergenic |
| GCGTGGTGGACGCCATGGTG+TGG | 0.451351 | 8_1:-73057675 | Msa1213040:CDS |
| CAGAAACCAAGGGGAATTCT+CGG | 0.453158 | 8_1:-73057741 | Msa1213040:CDS |
| AACTATCACACCTTTCTCAT+AGG | 0.460268 | 8_1:+73060919 | None:intergenic |
| CTACCCCAGTGTGAGCATAT+TGG | 0.461461 | 8_1:-73057631 | Msa1213040:exon |
| AAGGTCATTCCATATATATA+CGG | 0.461746 | 8_1:-73059915 | Msa1213040:CDS |
| CTAGTAAGCGATAGCGGAAG+AGG | 0.464753 | 8_1:-73057857 | Msa1213040:intron |
| AGTTGTTGGCAATGCCTTTG+TGG | 0.464870 | 8_1:-73061846 | Msa1213040:CDS |
| TGCCTCTCACCAACAGTGAT+AGG | 0.466058 | 8_1:+73058005 | None:intergenic |
| AAGAGGTGGTTTCCGAGGCG+AGG | 0.467895 | 8_1:-73057819 | Msa1213040:CDS |
| AGGATCTTCCACAAGATGTT+CGG | 0.469823 | 8_1:+73060586 | None:intergenic |
| AGATCCAACTTCTGCAGTCC+AGG | 0.473884 | 8_1:-73060420 | Msa1213040:CDS |
| TGATGAAGTTTATTATCCTA+TGG | 0.474945 | 8_1:-73060528 | Msa1213040:CDS |
| GGAAGAGGGAGGCATCCTTC+GGG | 0.476657 | 8_1:-73057842 | Msa1213040:CDS |
| GGTGGGCGTGGTGGACGCCA+TGG | 0.480860 | 8_1:-73057680 | Msa1213040:CDS |
| CAGGCTTCACCTATCACTGT+TGG | 0.481423 | 8_1:-73058014 | Msa1213040:CDS |
| CTTGGTGCACTGTCACTACT+AGG | 0.485500 | 8_1:+73060150 | None:intergenic |
| CCTTGTTTAGGCACAAGTGC+AGG | 0.485740 | 8_1:-73057520 | Msa1213040:three_prime_UTR |
| ATTGATGACATTATTTATTG+AGG | 0.486265 | 8_1:+73060748 | None:intergenic |
| GGGAGGCATCCTTCGGGAAG+AGG | 0.486465 | 8_1:-73057836 | Msa1213040:CDS |
| GGGAGATTTGGTGGTGGACG+AGG | 0.486577 | 8_1:-73057782 | Msa1213040:CDS |
| ATGTCTTTCGTGCATCATCC+TGG | 0.491934 | 8_1:+73060402 | None:intergenic |
| ATTTATGTTAACAACTCAAT+CGG | 0.492222 | 8_1:+73057339 | None:intergenic |
| TGCAATTACTCAAATAGAAG+AGG | 0.494000 | 8_1:-73057473 | Msa1213040:three_prime_UTR |
| GCCACTCTTGCAGCTCGGCT+GGG | 0.494495 | 8_1:+73060240 | None:intergenic |
| ACTCCTAGTCCTCAAGTTGT+TGG | 0.497836 | 8_1:-73061860 | Msa1213040:CDS |
| GCTACCGCAAAATCTACTCC+TGG | 0.499593 | 8_1:-73060189 | Msa1213040:CDS |
| CCTTCTTCCTTGTTGTCCAT+AGG | 0.500348 | 8_1:+73060512 | None:intergenic |
| AACAATTGAACTTCTTGAAG+AGG | 0.503256 | 8_1:-73059875 | Msa1213040:CDS |
| TCAGGAACGTCACTAGTCCT+TGG | 0.504045 | 8_1:+73060132 | None:intergenic |
| GAAAACAAAGCAAACGCTGC+TGG | 0.506394 | 8_1:-73057590 | Msa1213040:three_prime_UTR |
| TTCTGCTTTCTAAACCAAGC+TGG | 0.511000 | 8_1:-73062736 | Msa1213040:intron |
| CACCAAATCTCCCACGCCCC+CGG | 0.511878 | 8_1:+73057792 | None:intergenic |
| TGTACAATCTTCATAGTTCA+GGG | 0.513254 | 8_1:+73060973 | None:intergenic |
| AGAGGTGGTTTCCGAGGCGA+GGG | 0.514716 | 8_1:-73057818 | Msa1213040:CDS |
| TCATCCTGGACTGCAGAAGT+TGG | 0.514718 | 8_1:+73060416 | None:intergenic |
| AATCGCCTGACTTGGTGCAC+AGG | 0.516784 | 8_1:-73061799 | Msa1213040:CDS |
| GGACAACAAGGAAGAAGGAT+TGG | 0.517698 | 8_1:-73060507 | Msa1213040:CDS |
| CCTGCACTTGTGCCTAAACA+AGG | 0.518421 | 8_1:+73057520 | None:intergenic |
| AGGATTGGTTATTGATGAAG+AGG | 0.520461 | 8_1:-73060492 | Msa1213040:CDS |
| CCTATGGACAACAAGGAAGA+AGG | 0.522127 | 8_1:-73060512 | Msa1213040:CDS |
| TACAAGGTAAACTTCCACAT+TGG | 0.523893 | 8_1:+73057314 | None:intergenic |
| CTACTAGGCGCTAATGCCTC+AGG | 0.526959 | 8_1:+73060165 | None:intergenic |
| AGCTAAGTAGGATTCACGTC+AGG | 0.529551 | 8_1:-73062895 | Msa1213040:five_prime_UTR |
| GTGGTGGACGCCATGGTGTG+GGG | 0.532361 | 8_1:-73057673 | Msa1213040:CDS |
| ACCAATTTCAACTGAAGCAA+AGG | 0.533126 | 8_1:+73057202 | None:intergenic |
| TCTGCATCAATCGCCTGACT+TGG | 0.536954 | 8_1:-73061807 | Msa1213040:CDS |
| AGTCAAAATGGAGGTGGGCG+TGG | 0.538312 | 8_1:-73057692 | Msa1213040:CDS |
| ACAAAGCACTTCGGCAAGGG+GGG | 0.539452 | 8_1:+73057439 | None:intergenic |
| GCACCCTTCCGAACATCTTG+TGG | 0.539517 | 8_1:-73060594 | Msa1213040:CDS |
| CACGTGCGTGCATACCAGCT+TGG | 0.541692 | 8_1:+73062722 | None:intergenic |
| TTGCCAACAACTTGAGGACT+AGG | 0.541881 | 8_1:+73061857 | None:intergenic |
| TTAACCAATATGCTCACACT+GGG | 0.542047 | 8_1:+73057627 | None:intergenic |
| AGACAGAGATTCTGTTGTGA+AGG | 0.542186 | 8_1:+73062785 | None:intergenic |
| TTTCTCTGTAATAAGCTCAA+AGG | 0.542483 | 8_1:-73057286 | Msa1213040:three_prime_UTR |
| AGGACAAGTCAAAATGGAGG+TGG | 0.544941 | 8_1:-73057698 | Msa1213040:CDS |
| TCCCAGCCGAGCTGCAAGAG+TGG | 0.546033 | 8_1:-73060241 | Msa1213040:CDS |
| TGATCTCCGAACCAAGATAG+AGG | 0.548030 | 8_1:-73062828 | Msa1213040:five_prime_UTR |
| ATTAACCAATATGCTCACAC+TGG | 0.548586 | 8_1:+73057626 | None:intergenic |
| CTTGTCCTATGAGAACTCCT+AGG | 0.549687 | 8_1:+73057713 | None:intergenic |
| CTTGCCGAAGTGCTTTGTAT+CGG | 0.550647 | 8_1:-73057434 | Msa1213040:three_prime_UTR |
| ACTAGTGACGTTCCTGAAGA+AGG | 0.551265 | 8_1:-73060126 | Msa1213040:intron |
| TTGATTGATGAGGCGAGTGT+AGG | 0.551808 | 8_1:-73057249 | Msa1213040:three_prime_UTR |
| GGGCGTGGGAGATTTGGTGG+TGG | 0.555524 | 8_1:-73057788 | Msa1213040:CDS |
| AGAAACCAAGGGGAATTCTC+GGG | 0.557016 | 8_1:-73057740 | Msa1213040:CDS |
| AGAAATGAATTCAGAAACCA+AGG | 0.559653 | 8_1:-73057752 | Msa1213040:CDS |
| GATACAAAGCACTTCGGCAA+GGG | 0.561460 | 8_1:+73057436 | None:intergenic |
| AGGCATCCTTCGGGAAGAGG+TGG | 0.563265 | 8_1:-73057833 | Msa1213040:CDS |
| ATACAAAGCACTTCGGCAAG+GGG | 0.567634 | 8_1:+73057437 | None:intergenic |
| GCTCAGGAGTCCTATGAGAA+AGG | 0.568276 | 8_1:-73060929 | Msa1213040:CDS |
| TACTGGATGCTTAACTGGGA+AGG | 0.573370 | 8_1:-73060891 | Msa1213040:CDS |
| TCGGGAAGAGGTGGTTTCCG+AGG | 0.574206 | 8_1:-73057824 | Msa1213040:CDS |
| AGTCCAAGTAAGAAGCAGTA+AGG | 0.574728 | 8_1:-73059818 | Msa1213040:intron |
| CAGACGCCACTCTTGCAGCT+CGG | 0.581183 | 8_1:+73060235 | None:intergenic |
| TGACGTCTTTAGGTACATTG+AGG | 0.581193 | 8_1:-73060798 | Msa1213040:intron |
| GAGGACTAGGAGTAGTAGAA+GGG | 0.589077 | 8_1:+73061870 | None:intergenic |
| CTACCGCAAAATCTACTCCT+GGG | 0.589382 | 8_1:-73060188 | Msa1213040:CDS |
| CAAAGCACTTCGGCAAGGGG+GGG | 0.589494 | 8_1:+73057440 | None:intergenic |
| AAATTGGGCTGTAATGACAT+TGG | 0.592066 | 8_1:-73057174 | Msa1213040:three_prime_UTR |
| TAGTTACTGGATGCTTAACT+GGG | 0.594894 | 8_1:-73060895 | Msa1213040:CDS |
| TTGAGGCAGAACTTAACTGT+GGG | 0.595995 | 8_1:+73060765 | None:intergenic |
| AAAATCTACTCCTGGGCCTG+AGG | 0.598211 | 8_1:-73060181 | Msa1213040:CDS |
| CACCTATCACTGTTGGTGAG+AGG | 0.598308 | 8_1:-73058007 | Msa1213040:CDS |
| AAGGCATTGCCAACAACTTG+AGG | 0.599295 | 8_1:+73061851 | None:intergenic |
| TTCCGAGGCGAGGGTTTCCG+GGG | 0.602548 | 8_1:-73057809 | Msa1213040:CDS |
| CGATACAAAGCACTTCGGCA+AGG | 0.604131 | 8_1:+73057435 | None:intergenic |
| TGAGAGGCAAGCTGTTATTG+AGG | 0.604470 | 8_1:-73057991 | Msa1213040:CDS |
| TCTTCCACAAGATGTTCGGA+AGG | 0.605079 | 8_1:+73060590 | None:intergenic |
| CAAAATGGAGGTGGGCGTGG+TGG | 0.606054 | 8_1:-73057689 | Msa1213040:CDS |
| AAATTTGGTCCTATTAAGCA+TGG | 0.606114 | 8_1:-73059844 | Msa1213040:CDS |
| CTGGGAAGGATAACGTGAGA+AGG | 0.608352 | 8_1:-73060877 | Msa1213040:CDS |
| TACAAAGCACTTCGGCAAGG+GGG | 0.608486 | 8_1:+73057438 | None:intergenic |
| CTTATTCTAGTAAGCGATAG+CGG | 0.609149 | 8_1:-73057863 | Msa1213040:intron |
| TAGTAAGCGATAGCGGAAGA+GGG | 0.613022 | 8_1:-73057856 | Msa1213040:CDS |
| GAAATGAATTCAGAAACCAA+GGG | 0.613900 | 8_1:-73057751 | Msa1213040:CDS |
| TTACTCAAATAGAAGAGGAG+TGG | 0.618441 | 8_1:-73057468 | Msa1213040:three_prime_UTR |
| AGATCCTGCAACCTCTGCAG+AGG | 0.627391 | 8_1:-73060570 | Msa1213040:CDS |
| CGGAAACCACCTCTTCCCGA+AGG | 0.627436 | 8_1:+73057827 | None:intergenic |
| GGACAAGTCAAAATGGAGGT+GGG | 0.630012 | 8_1:-73057697 | Msa1213040:CDS |
| TATGTTAACAACTCAATCGG+AGG | 0.636026 | 8_1:+73057342 | None:intergenic |
| GTGATAATATTGCTCCACAA+AGG | 0.638427 | 8_1:+73061832 | None:intergenic |
| GATCTCCGAACCAAGATAGA+GGG | 0.639803 | 8_1:-73062827 | Msa1213040:five_prime_UTR |
| TTTGGTCCTATTAAGCATGG+TGG | 0.646743 | 8_1:-73059841 | Msa1213040:CDS |
| ATTGAGGCAGAACTTAACTG+TGG | 0.647373 | 8_1:+73060764 | None:intergenic |
| TTGAGTAGATCAGACAGCAA+TGG | 0.654618 | 8_1:-73061755 | Msa1213040:CDS |
| TAAGCGATAGCGGAAGAGGG+AGG | 0.655900 | 8_1:-73057853 | Msa1213040:CDS |
| CTAAACAAGGGAAAACAAAG+AGG | 0.657502 | 8_1:+73057533 | None:intergenic |
| CATTATGGTTCCCCACACCA+TGG | 0.658602 | 8_1:+73057663 | None:intergenic |
| TCCGAGGCGAGGGTTTCCGG+GGG | 0.660506 | 8_1:-73057808 | Msa1213040:CDS |
| CTGCACTTGTGCCTAAACAA+GGG | 0.668381 | 8_1:+73057521 | None:intergenic |
| TTCTCACTTAGATCATTAGG+CGG | 0.670518 | 8_1:+73060461 | None:intergenic |
| ATGACCGATACAAAGCACTT+CGG | 0.678534 | 8_1:+73057430 | None:intergenic |
| CTTCCACAAGATGTTCGGAA+GGG | 0.681793 | 8_1:+73060591 | None:intergenic |
| CATAGGACAAGTCAAAATGG+AGG | 0.683264 | 8_1:-73057701 | Msa1213040:CDS |
| GTTAACATAAATCTCCAATG+TGG | 0.687509 | 8_1:-73057328 | Msa1213040:three_prime_UTR |
| AAATGAATTCAGAAACCAAG+GGG | 0.690944 | 8_1:-73057750 | Msa1213040:CDS |
| CTGCTAAATCCAATGAACAA+CGG | 0.694097 | 8_1:-73060215 | Msa1213040:CDS |
| TTATTATCCTATGGACAACA+AGG | 0.695300 | 8_1:-73060519 | Msa1213040:CDS |
| TGTCATCAATGAAAATGGTG+AGG | 0.702625 | 8_1:-73060735 | Msa1213040:CDS |
| GAAAAGATATCGAGTACACG+AGG | 0.731969 | 8_1:-73057969 | Msa1213040:intron |
| CTAGTAGTGACAGTGCACCA+AGG | 0.746793 | 8_1:-73060149 | Msa1213040:CDS |
| TAACCAATATGCTCACACTG+GGG | 0.814579 | 8_1:+73057628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAGTTAAATTAT+AGG | - | chr8_1:73058542-73058561 | Msa1213040:intron | 10.0% |
| !! | ATAAATCTAGCAATATAAAA+TGG | + | chr8_1:73057444-73057463 | None:intergenic | 15.0% |
| !! | TTATTTATTCATTTCGTTTA+TGG | - | chr8_1:73057460-73057479 | Msa1213040:three_prime_UTR | 15.0% |
| !!! | ATTTATATTTCTATTGTTCA+GGG | + | chr8_1:73057922-73057941 | None:intergenic | 15.0% |
| !!! | TATTTATATTTCTATTGTTC+AGG | + | chr8_1:73057923-73057942 | None:intergenic | 15.0% |
| !! | TGCAAAAAACAAAAATTAAT+AGG | - | chr8_1:73057950-73057969 | Msa1213040:intron | 15.0% |
| !! | AAAAATTCACAATAATGTAA+GGG | + | chr8_1:73058120-73058139 | None:intergenic | 15.0% |
| !! | AAAAAATTCACAATAATGTA+AGG | + | chr8_1:73058121-73058140 | None:intergenic | 15.0% |
| !! | ATTATAGTTAAATTATAGGT+AGG | - | chr8_1:73058546-73058565 | Msa1213040:intron | 15.0% |
| !!! | ATCTTTTAGGTTTTATAAAA+CGG | - | chr8_1:73058683-73058702 | Msa1213040:intron | 15.0% |
| !!! | AACTTTAATTTTGAATAAAC+TGG | - | chr8_1:73060490-73060509 | Msa1213040:CDS | 15.0% |
| !!! | CTAAATTTAATTTCATTTTC+AGG | - | chr8_1:73062003-73062022 | Msa1213040:intron | 15.0% |
| !! | TTTAAGAAAAAAGCAGTTAA+CGG | + | chr8_1:73057385-73057404 | None:intergenic | 20.0% |
| !! | ATCAATATGTTCATAAGTAA+GGG | + | chr8_1:73057827-73057846 | None:intergenic | 20.0% |
| !! | AATCAATATGTTCATAAGTA+AGG | + | chr8_1:73057828-73057847 | None:intergenic | 20.0% |
| !!! | CATTAATGAAGCATAAATTT+TGG | + | chr8_1:73058088-73058107 | None:intergenic | 20.0% |
| !! | ATCATTGTTCTATATACATT+TGG | + | chr8_1:73058397-73058416 | None:intergenic | 20.0% |
| !!! | ATTGATGACATTATTTATTG+AGG | + | chr8_1:73059291-73059310 | None:intergenic | 20.0% |
| !! | AATAATGTCATCAATGAAAA+TGG | - | chr8_1:73059296-73059315 | Msa1213040:intron | 20.0% |
| !! | GTTTATAACTTCATATATTC+TGG | - | chr8_1:73060044-73060063 | Msa1213040:intron | 20.0% |
| !! | TGTAATAAATAGTTCTTTCT+TGG | + | chr8_1:73060456-73060475 | None:intergenic | 20.0% |
| !!! | AGTTTTTGTATTTACTGTAT+CGG | - | chr8_1:73060718-73060737 | Msa1213040:CDS | 20.0% |
| !! | AAAATCAAAACAATCAGATT+GGG | + | chr8_1:73060854-73060873 | None:intergenic | 20.0% |
| !! | TAAAATCAAAACAATCAGAT+TGG | + | chr8_1:73060855-73060874 | None:intergenic | 20.0% |
| !! | ATTATTATGATTGATTGTCA+TGG | + | chr8_1:73061451-73061470 | None:intergenic | 20.0% |
| !!! | AAAGTTTTCTCAAATCAAAT+AGG | + | chr8_1:73061642-73061661 | None:intergenic | 20.0% |
| !!! | TTGATTTGAGAAAACTTTAT+TGG | - | chr8_1:73061644-73061663 | Msa1213040:intron | 20.0% |
| !!! | AATATTTTTTCAACTTCTCT+TGG | - | chr8_1:73062631-73062650 | Msa1213040:intron | 20.0% |
| !!! | ATATTTTTTCAACTTCTCTT+GGG | - | chr8_1:73062632-73062651 | Msa1213040:intron | 20.0% |
| !! | ATTTATGTTAACAACTCAAT+CGG | + | chr8_1:73062700-73062719 | None:intergenic | 20.0% |
| !! | TTACAGAGAAAAAAATTACA+AGG | + | chr8_1:73062741-73062760 | None:intergenic | 20.0% |
| !! | TTGAAATTGGTATACTAAAT+TGG | - | chr8_1:73062846-73062865 | Msa1213040:five_prime_UTR | 20.0% |
| !! | TGAAATTGGTATACTAAATT+GGG | - | chr8_1:73062847-73062866 | Msa1213040:five_prime_UTR | 20.0% |
| ! | AAAATGTATAGTAGCTAAGT+AGG | - | chr8_1:73057129-73057148 | Msa1213040:three_prime_UTR | 25.0% |
| ! | AGGAATAAAAAAAGCAATAG+CGG | - | chr8_1:73057161-73057180 | Msa1213040:three_prime_UTR | 25.0% |
| ! | AATCAAGACTATAAAAGAAC+AGG | + | chr8_1:73057488-73057507 | None:intergenic | 25.0% |
| ! | GATAATCTACTTATTGATGA+AGG | - | chr8_1:73057629-73057648 | Msa1213040:exon | 25.0% |
| !! | CTATCATTTTCTATCCTATT+TGG | - | chr8_1:73057895-73057914 | Msa1213040:intron | 25.0% |
| ! | ACAAAAATTAATAGGAGAGA+AGG | - | chr8_1:73057958-73057977 | Msa1213040:intron | 25.0% |
| !! | TGGAAAAACGATACATTTTT+CGG | - | chr8_1:73058051-73058070 | Msa1213040:intron | 25.0% |
| !!! | TCATGATATCTTTCTAGTTA+CGG | - | chr8_1:73058431-73058450 | Msa1213040:intron | 25.0% |
| ! | ATAAAGGATACAAAAGATCA+GGG | + | chr8_1:73058952-73058971 | None:intergenic | 25.0% |
| !! | TTTTCAACTCATTAACTAGA+AGG | - | chr8_1:73059000-73059019 | Msa1213040:intron | 25.0% |
| ! | AAACTTCATCACCATTATTA+GGG | + | chr8_1:73059499-73059518 | None:intergenic | 25.0% |
| ! | TAAACTTCATCACCATTATT+AGG | + | chr8_1:73059500-73059519 | None:intergenic | 25.0% |
| ! | TGATGAAGTTTATTATCCTA+TGG | - | chr8_1:73059508-73059527 | Msa1213040:intron | 25.0% |
| !!! | ATAGCCTCTTTTTCATTAAT+GGG | + | chr8_1:73060012-73060031 | None:intergenic | 25.0% |
| !!! | TATAGCCTCTTTTTCATTAA+TGG | + | chr8_1:73060013-73060032 | None:intergenic | 25.0% |
| ! | AAGGTCATTCCATATATATA+CGG | - | chr8_1:73060121-73060140 | Msa1213040:intron | 25.0% |
| ! | AGTTCAATTGTTGCATTAAA+TGG | + | chr8_1:73060153-73060172 | None:intergenic | 25.0% |
| !!! | GAAGAGGTTTTTAAGAAATT+TGG | - | chr8_1:73060177-73060196 | Msa1213040:CDS | 25.0% |
| !! | TGTAAGCTAATCTGTATTTT+TGG | - | chr8_1:73060298-73060317 | Msa1213040:intron | 25.0% |
| !! | TTCAACTGTTGATTATAGTT+TGG | - | chr8_1:73060409-73060428 | Msa1213040:CDS | 25.0% |
| !! | ACTTTTGAATTGATAAGTAG+TGG | - | chr8_1:73060516-73060535 | Msa1213040:CDS | 25.0% |
| !! | TGAAAAAACAAACTGTTTTC+TGG | - | chr8_1:73060789-73060808 | Msa1213040:CDS | 25.0% |
| ! | ATATTATCCCATTCAATTGA+TGG | - | chr8_1:73061206-73061225 | Msa1213040:intron | 25.0% |
| ! | TTTGTTACCATCAATTGAAT+GGG | + | chr8_1:73061216-73061235 | None:intergenic | 25.0% |
| !! | TTTTGTTACCATCAATTGAA+TGG | + | chr8_1:73061217-73061236 | None:intergenic | 25.0% |
| ! | GAAGATTGATCAACAAAATT+GGG | + | chr8_1:73061265-73061284 | None:intergenic | 25.0% |
| ! | TGAAGATTGATCAACAAAAT+TGG | + | chr8_1:73061266-73061285 | None:intergenic | 25.0% |
| ! | ACAATAGAATGATTCTAACT+AGG | + | chr8_1:73061290-73061309 | None:intergenic | 25.0% |
| !! | GAAATCTTTCTTTTGGTATA+TGG | + | chr8_1:73061346-73061365 | None:intergenic | 25.0% |
| !! | TCTGTTAGAAATCTTTCTTT+TGG | + | chr8_1:73061353-73061372 | None:intergenic | 25.0% |
| ! | TCATAATAATACTATGCAGA+AGG | - | chr8_1:73061461-73061480 | Msa1213040:intron | 25.0% |
| ! | CATAATAATACTATGCAGAA+GGG | - | chr8_1:73061462-73061481 | Msa1213040:intron | 25.0% |
| ! | ATAATAATACTATGCAGAAG+GGG | - | chr8_1:73061463-73061482 | Msa1213040:intron | 25.0% |
| ! | AATAAAACTAATTGCTTCCT+AGG | + | chr8_1:73061546-73061565 | None:intergenic | 25.0% |
| !!! | TAGGAAGCAATTAGTTTTAT+TGG | - | chr8_1:73061545-73061564 | Msa1213040:intron | 25.0% |
| !! | TGTAATTTTCCTATATCGAA+TGG | - | chr8_1:73061818-73061837 | Msa1213040:CDS | 25.0% |
| ! | AGTAAAAAACCATTCGATAT+AGG | + | chr8_1:73061830-73061849 | None:intergenic | 25.0% |
| ! | TATGCGAGTACAAATAATAT+AGG | + | chr8_1:73061863-73061882 | None:intergenic | 25.0% |
| ! | CTACTTCAGAATAATTTGAA+TGG | + | chr8_1:73061905-73061924 | None:intergenic | 25.0% |
| !! | AATTTTCGTCCATAAAATGA+TGG | - | chr8_1:73062891-73062910 | Msa1213040:five_prime_UTR | 25.0% |
| !! | ATTTTCGTCCATAAAATGAT+GGG | - | chr8_1:73062892-73062911 | Msa1213040:five_prime_UTR | 25.0% |
| GGAATAAAAAAAGCAATAGC+GGG | - | chr8_1:73057162-73057181 | Msa1213040:three_prime_UTR | 30.0% | |
| TGATTATAATACTCTCCATG+TGG | - | chr8_1:73057503-73057522 | Msa1213040:three_prime_UTR | 30.0% | |
| AACAACTTAATTATGCCACA+TGG | + | chr8_1:73057521-73057540 | None:intergenic | 30.0% | |
| ! | GTCTTGTTCCTTATAATTGT+AGG | - | chr8_1:73057771-73057790 | Msa1213040:CDS | 30.0% |
| GATCTAAGCCTACAATTATA+AGG | + | chr8_1:73057782-73057801 | None:intergenic | 30.0% | |
| AAACATTCAATTTCGTCACT+AGG | - | chr8_1:73057872-73057891 | Msa1213040:intron | 30.0% | |
| TAGTTTAGAGACCAAATTGA+AGG | - | chr8_1:73057984-73058003 | Msa1213040:CDS | 30.0% | |
| AAAAGAGCAAACCTTCAATT+TGG | + | chr8_1:73057998-73058017 | None:intergenic | 30.0% | |
| !! | CTCTTTTACGAATTTGAGAT+CGG | - | chr8_1:73058011-73058030 | Msa1213040:CDS | 30.0% |
| !! | TCTTTTACGAATTTGAGATC+GGG | - | chr8_1:73058012-73058031 | Msa1213040:CDS | 30.0% |
| AATTCACAATAATGTAAGGG+AGG | + | chr8_1:73058117-73058136 | None:intergenic | 30.0% | |
| !!! | ATTGTGAATTTTTTCGCAGA+TGG | - | chr8_1:73058127-73058146 | Msa1213040:intron | 30.0% |
| !! | TAGAAATGTTGGTTTGTAGT+AGG | - | chr8_1:73058457-73058476 | Msa1213040:intron | 30.0% |
| !! | AGAAATGTTGGTTTGTAGTA+GGG | - | chr8_1:73058458-73058477 | Msa1213040:intron | 30.0% |
| !! | CTCATATATAGTGGGTTAAA+AGG | - | chr8_1:73058487-73058506 | Msa1213040:intron | 30.0% |
| ! | GTGGGTTAAAAGGTTAATAA+AGG | - | chr8_1:73058497-73058516 | Msa1213040:intron | 30.0% |
| ! | ATAGGTAGGTATTGTTCTAT+AGG | - | chr8_1:73058560-73058579 | Msa1213040:intron | 30.0% |
| ! | CAGAACTAGGTTTATCTTTT+AGG | - | chr8_1:73058670-73058689 | Msa1213040:intron | 30.0% |
| !! | ATATCAAGCTTTTAGAAACC+AGG | + | chr8_1:73058785-73058804 | None:intergenic | 30.0% |
| ! | TTCTAAAAGCTTGATATCTC+AGG | - | chr8_1:73058788-73058807 | Msa1213040:intron | 30.0% |
| ACTCCCTACTAAATAATTGT+GGG | - | chr8_1:73058859-73058878 | Msa1213040:intron | 30.0% | |
| CATCCCACAATTATTTAGTA+GGG | + | chr8_1:73058865-73058884 | None:intergenic | 30.0% | |
| ACATCCCACAATTATTTAGT+AGG | + | chr8_1:73058866-73058885 | None:intergenic | 30.0% | |
| GATAAAGGATACAAAAGATC+AGG | + | chr8_1:73058953-73058972 | None:intergenic | 30.0% | |
| TCCTTTATCTATATTTACCC+TGG | - | chr8_1:73058964-73058983 | Msa1213040:intron | 30.0% | |
| ACCAGGGTAAATATAGATAA+AGG | + | chr8_1:73058968-73058987 | None:intergenic | 30.0% | |
| AAAATAAACCACAAGTACCA+GGG | + | chr8_1:73058984-73059003 | None:intergenic | 30.0% | |
| AACTAGAAGGAAATAACTGT+TGG | - | chr8_1:73059013-73059032 | Msa1213040:intron | 30.0% | |
| TGTACAATCTTCATAGTTCA+GGG | + | chr8_1:73059066-73059085 | None:intergenic | 30.0% | |
| ACATAATATCCTTTGTCTTG+TGG | + | chr8_1:73059212-73059231 | None:intergenic | 30.0% | |
| ATGTCTTAAATGACGTCTTT+AGG | - | chr8_1:73059228-73059247 | Msa1213040:intron | 30.0% | |
| TTATTATCCTATGGACAACA+AGG | - | chr8_1:73059517-73059536 | Msa1213040:intron | 30.0% | |
| TCATTCTCACTTAGATCATT+AGG | + | chr8_1:73059581-73059600 | None:intergenic | 30.0% | |
| TAAGAGTTTCACTGATATGA+AGG | - | chr8_1:73059735-73059754 | Msa1213040:intron | 30.0% | |
| !! | TAGCCTCTTTTTCATTAATG+GGG | + | chr8_1:73060011-73060030 | None:intergenic | 30.0% |
| AACAATTGAACTTCTTGAAG+AGG | - | chr8_1:73060161-73060180 | Msa1213040:CDS | 30.0% | |
| AAATTTGGTCCTATTAAGCA+TGG | - | chr8_1:73060192-73060211 | Msa1213040:CDS | 30.0% | |
| !!! | TTTTGGCTTTGTTGAATATG+AGG | - | chr8_1:73060342-73060361 | Msa1213040:intron | 30.0% |
| ! | ACACAATGTTTTACAATCAG+AGG | + | chr8_1:73060648-73060667 | None:intergenic | 30.0% |
| TAGATTTGTATCTTCTCACA+TGG | - | chr8_1:73060906-73060925 | Msa1213040:CDS | 30.0% | |
| GTCAATATTGTTTCCTTCAA+AGG | - | chr8_1:73061021-73061040 | Msa1213040:intron | 30.0% | |
| TAATGACAAGAGAAAAAGAC+AGG | + | chr8_1:73061074-73061093 | None:intergenic | 30.0% | |
| TTTCACATTATTGCATTCTC+TGG | + | chr8_1:73061111-73061130 | None:intergenic | 30.0% | |
| AGAGAATGCAATAATGTGAA+AGG | - | chr8_1:73061110-73061129 | Msa1213040:intron | 30.0% | |
| AGAAAGATTTCTAACAGAAG+TGG | - | chr8_1:73061355-73061374 | Msa1213040:intron | 30.0% | |
| GAAGGGGATTAATAATACAA+CGG | - | chr8_1:73061479-73061498 | Msa1213040:intron | 30.0% | |
| GTAATCGTATTCACAAAATC+CGG | - | chr8_1:73061515-73061534 | Msa1213040:intron | 30.0% | |
| AACTTTATTGGAAAGTAGCT+TGG | - | chr8_1:73061656-73061675 | Msa1213040:intron | 30.0% | |
| AAACATGCAAAAAAAACCAC+TGG | + | chr8_1:73061724-73061743 | None:intergenic | 30.0% | |
| TCAAATCAGAAACTCGATAT+AGG | + | chr8_1:73061763-73061782 | None:intergenic | 30.0% | |
| CAAATAACTAAACTGTCAAC+AGG | + | chr8_1:73061969-73061988 | None:intergenic | 30.0% | |
| AGAAATGAATTCAGAAACCA+AGG | - | chr8_1:73062284-73062303 | Msa1213040:intron | 30.0% | |
| GAAATGAATTCAGAAACCAA+GGG | - | chr8_1:73062285-73062304 | Msa1213040:intron | 30.0% | |
| AAATGAATTCAGAAACCAAG+GGG | - | chr8_1:73062286-73062305 | Msa1213040:intron | 30.0% | |
| ! | AACAAAGAGGTTTTTGTGTT+TGG | + | chr8_1:73062493-73062512 | None:intergenic | 30.0% |
| TGCAATTACTCAAATAGAAG+AGG | - | chr8_1:73062563-73062582 | Msa1213040:intron | 30.0% | |
| GTTAACATAAATCTCCAATG+TGG | - | chr8_1:73062708-73062727 | Msa1213040:intron | 30.0% | |
| TTTCTCTGTAATAAGCTCAA+AGG | - | chr8_1:73062750-73062769 | Msa1213040:five_prime_UTR | 30.0% | |
| TGTAATAAGCTCAAAGGAAA+TGG | - | chr8_1:73062756-73062775 | Msa1213040:five_prime_UTR | 30.0% | |
| !!! | GGAAACTATTTTGATTGATG+AGG | - | chr8_1:73062777-73062796 | Msa1213040:five_prime_UTR | 30.0% |
| AGTTAACGGAAATCGTTGAA+AGG | + | chr8_1:73057371-73057390 | None:intergenic | 35.0% | |
| GCATGAAATGAAACTACATG+TGG | - | chr8_1:73057651-73057670 | Msa1213040:CDS | 35.0% | |
| !! | TACATTTTTCGGATCTTCCT+TGG | - | chr8_1:73058062-73058081 | Msa1213040:intron | 35.0% |
| !! | TGAAGCATAAATTTTGGCCA+AGG | + | chr8_1:73058082-73058101 | None:intergenic | 35.0% |
| GTGATAATATTGCTCCACAA+AGG | + | chr8_1:73058207-73058226 | None:intergenic | 35.0% | |
| AGTTACGGATCTAGAAATGT+TGG | - | chr8_1:73058446-73058465 | Msa1213040:intron | 35.0% | |
| GGTCGATACTCATATATAGT+GGG | - | chr8_1:73058479-73058498 | Msa1213040:intron | 35.0% | |
| ! | GTAGGTATTGTTCTATAGGT+TGG | - | chr8_1:73058564-73058583 | Msa1213040:intron | 35.0% |
| GCATTCCAGATCATAATGAT+GGG | - | chr8_1:73058586-73058605 | Msa1213040:intron | 35.0% | |
| AATGTCCCATCATTATGATC+TGG | + | chr8_1:73058594-73058613 | None:intergenic | 35.0% | |
| TATAAAACGGCTCTGTTGTT+TGG | - | chr8_1:73058696-73058715 | Msa1213040:intron | 35.0% | |
| !! | TTTTAGAAACCAGGATGATG+GGG | + | chr8_1:73058776-73058795 | None:intergenic | 35.0% |
| !! | CTTTTAGAAACCAGGATGAT+GGG | + | chr8_1:73058777-73058796 | None:intergenic | 35.0% |
| CACTCCCTACTAAATAATTG+TGG | - | chr8_1:73058858-73058877 | Msa1213040:intron | 35.0% | |
| TATATTTACCCTGGTACTTG+TGG | - | chr8_1:73058973-73058992 | Msa1213040:intron | 35.0% | |
| GAAAATAAACCACAAGTACC+AGG | + | chr8_1:73058985-73059004 | None:intergenic | 35.0% | |
| AAGGAAATAACTGTTGGATC+AGG | - | chr8_1:73059019-73059038 | Msa1213040:intron | 35.0% | |
| CTGTACAATCTTCATAGTTC+AGG | + | chr8_1:73059067-73059086 | None:intergenic | 35.0% | |
| AATAAAAACTGCAGATGCTC+AGG | - | chr8_1:73059091-73059110 | Msa1213040:intron | 35.0% | |
| AACTATCACACCTTTCTCAT+AGG | + | chr8_1:73059120-73059139 | None:intergenic | 35.0% | |
| !!! | GGTGTGATAGTTTTAGTTAC+TGG | - | chr8_1:73059128-73059147 | Msa1213040:intron | 35.0% |
| TTAGTTACTGGATGCTTAAC+TGG | - | chr8_1:73059140-73059159 | Msa1213040:intron | 35.0% | |
| TAGTTACTGGATGCTTAACT+GGG | - | chr8_1:73059141-73059160 | Msa1213040:intron | 35.0% | |
| ! | GTTCTCACAGACATTCTTTT+TGG | - | chr8_1:73059184-73059203 | Msa1213040:intron | 35.0% |
| TGTCATCAATGAAAATGGTG+AGG | - | chr8_1:73059301-73059320 | Msa1213040:intron | 35.0% | |
| GAAGAAGCAATTACAGATTG+AGG | + | chr8_1:73059404-73059423 | None:intergenic | 35.0% | |
| !! | TGCTTCTTCAATGTTTCTAG+AGG | - | chr8_1:73059415-73059434 | Msa1213040:intron | 35.0% |
| GAGGATGAAAACCCTAATAA+TGG | - | chr8_1:73059485-73059504 | Msa1213040:intron | 35.0% | |
| !! | AGGATTGGTTATTGATGAAG+AGG | - | chr8_1:73059544-73059563 | Msa1213040:intron | 35.0% |
| TTCTCACTTAGATCATTAGG+CGG | + | chr8_1:73059578-73059597 | None:intergenic | 35.0% | |
| ATGAAAAGTAACACAGCATC+TGG | - | chr8_1:73059760-73059779 | Msa1213040:intron | 35.0% | |
| CTGCTAAATCCAATGAACAA+CGG | - | chr8_1:73059821-73059840 | Msa1213040:CDS | 35.0% | |
| CATCAATATACACCTTCTTC+AGG | + | chr8_1:73059925-73059944 | None:intergenic | 35.0% | |
| ! | GAAGGTGTATATTGATGCTT+TGG | - | chr8_1:73059928-73059947 | Msa1213040:intron | 35.0% |
| TCTTCAGAGTGAGTCAAAAT+TGG | + | chr8_1:73059976-73059995 | None:intergenic | 35.0% | |
| CTACCCCATTAATGAAAAAG+AGG | - | chr8_1:73060005-73060024 | Msa1213040:intron | 35.0% | |
| TGGCAAGTTCCGTATATATA+TGG | + | chr8_1:73060133-73060152 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGCTTCTTTCAGCA+TGG | - | chr8_1:73060313-73060332 | Msa1213040:intron | 35.0% |
| !!! | TTTTTGGCTTCTTTCAGCAT+GGG | - | chr8_1:73060314-73060333 | Msa1213040:intron | 35.0% |
| TTCTGTGCAAAATGCACTTA+AGG | - | chr8_1:73060372-73060391 | Msa1213040:intron | 35.0% | |
| !! | GGAAGTGCTGTATGTATATT+TGG | - | chr8_1:73060430-73060449 | Msa1213040:CDS | 35.0% |
| !!! | CAAACTGTTTTCTGGTTAGA+AGG | - | chr8_1:73060797-73060816 | Msa1213040:intron | 35.0% |
| TATCCTTGTGATGTAGATAC+AGG | - | chr8_1:73060934-73060953 | Msa1213040:CDS | 35.0% | |
| TACAGGTAGTTGAGTCAATT+AGG | - | chr8_1:73060951-73060970 | Msa1213040:CDS | 35.0% | |
| TATTCATTTCTGCCCTGTTT+GGG | - | chr8_1:73061311-73061330 | Msa1213040:intron | 35.0% | |
| TGGAAAAAATTCCCCAAACA+GGG | + | chr8_1:73061326-73061345 | None:intergenic | 35.0% | |
| ATGGAAAAAATTCCCCAAAC+AGG | + | chr8_1:73061327-73061346 | None:intergenic | 35.0% | |
| AGATTTCTAACAGAAGTGGT+CGG | - | chr8_1:73061359-73061378 | Msa1213040:intron | 35.0% | |
| GTTTGTCTGAAGAAAGATGT+TGG | - | chr8_1:73061616-73061635 | Msa1213040:intron | 35.0% | |
| ACACTAAAGATAGTAACCAG+TGG | - | chr8_1:73061705-73061724 | Msa1213040:intron | 35.0% | |
| AGAATAATTTGAATGGCCTG+TGG | + | chr8_1:73061898-73061917 | None:intergenic | 35.0% | |
| CTTATTCTAGTAAGCGATAG+CGG | - | chr8_1:73062173-73062192 | Msa1213040:intron | 35.0% | |
| TCTCATAGGACAAGTCAAAA+TGG | - | chr8_1:73062332-73062351 | Msa1213040:intron | 35.0% | |
| TTAACCAATATGCTCACACT+GGG | + | chr8_1:73062412-73062431 | None:intergenic | 35.0% | |
| ATTAACCAATATGCTCACAC+TGG | + | chr8_1:73062413-73062432 | None:intergenic | 35.0% | |
| CTAAACAAGGGAAAACAAAG+AGG | + | chr8_1:73062506-73062525 | None:intergenic | 35.0% | |
| !!! | CTCTTTGTTTTCCCTTGTTT+AGG | - | chr8_1:73062504-73062523 | Msa1213040:intron | 35.0% |
| TTACTCAAATAGAAGAGGAG+TGG | - | chr8_1:73062568-73062587 | Msa1213040:intron | 35.0% | |
| TATGTTAACAACTCAATCGG+AGG | + | chr8_1:73062697-73062716 | None:intergenic | 35.0% | |
| TACAAGGTAAACTTCCACAT+TGG | + | chr8_1:73062725-73062744 | None:intergenic | 35.0% | |
| ACCAATTTCAACTGAAGCAA+AGG | + | chr8_1:73062837-73062856 | None:intergenic | 35.0% | |
| AAATTGGGCTGTAATGACAT+TGG | - | chr8_1:73062862-73062881 | Msa1213040:five_prime_UTR | 35.0% | |
| GAGATTCTGTTGTGAAGGTT+TGG | + | chr8_1:73057249-73057268 | None:intergenic | 40.0% | |
| AGACAGAGATTCTGTTGTGA+AGG | + | chr8_1:73057254-73057273 | None:intergenic | 40.0% | |
| TTCTGCTTTCTAAACCAAGC+TGG | - | chr8_1:73057300-73057319 | Msa1213040:three_prime_UTR | 40.0% | |
| CTATTGTTCAGGGACCAAAT+AGG | + | chr8_1:73057912-73057931 | None:intergenic | 40.0% | |
| ! | TACGAATTTGAGATCGGGTT+TGG | - | chr8_1:73058017-73058036 | Msa1213040:intron | 40.0% |
| ! | ACGAATTTGAGATCGGGTTT+GGG | - | chr8_1:73058018-73058037 | Msa1213040:intron | 40.0% |
| TTGAGTAGATCAGACAGCAA+TGG | - | chr8_1:73058281-73058300 | Msa1213040:intron | 40.0% | |
| GGGTCGATACTCATATATAG+TGG | - | chr8_1:73058478-73058497 | Msa1213040:intron | 40.0% | |
| GGCATTCCAGATCATAATGA+TGG | - | chr8_1:73058585-73058604 | Msa1213040:intron | 40.0% | |
| TGTAAAGTTCTTGCCTTGGT+GGG | + | chr8_1:73058652-73058671 | None:intergenic | 40.0% | |
| GTTCTGTAAAGTTCTTGCCT+TGG | + | chr8_1:73058656-73058675 | None:intergenic | 40.0% | |
| GGCAAGAACTTTACAGAACT+AGG | - | chr8_1:73058657-73058676 | Msa1213040:intron | 40.0% | |
| ! | TTTAGAAACCAGGATGATGG+GGG | + | chr8_1:73058775-73058794 | None:intergenic | 40.0% |
| !! | GCTTTTAGAAACCAGGATGA+TGG | + | chr8_1:73058778-73058797 | None:intergenic | 40.0% |
| GCTTGATATCTCAGGCTATT+TGG | - | chr8_1:73058796-73058815 | Msa1213040:intron | 40.0% | |
| ATGCATTAGCAGAGTCTTAG+GGG | + | chr8_1:73058918-73058937 | None:intergenic | 40.0% | |
| CATGCATTAGCAGAGTCTTA+GGG | + | chr8_1:73058919-73058938 | None:intergenic | 40.0% | |
| ACATGCATTAGCAGAGTCTT+AGG | + | chr8_1:73058920-73058939 | None:intergenic | 40.0% | |
| !!! | TTTTTGGCTCCACAAGACAA+AGG | - | chr8_1:73059200-73059219 | Msa1213040:intron | 40.0% |
| TGACGTCTTTAGGTACATTG+AGG | - | chr8_1:73059238-73059257 | Msa1213040:intron | 40.0% | |
| TTGAGGCAGAACTTAACTGT+GGG | + | chr8_1:73059274-73059293 | None:intergenic | 40.0% | |
| ATTGAGGCAGAACTTAACTG+TGG | + | chr8_1:73059275-73059294 | None:intergenic | 40.0% | |
| ATGCCAGAATCAGGTTAGTA+TGG | - | chr8_1:73059332-73059351 | Msa1213040:intron | 40.0% | |
| AAGCCATACTAACCTGATTC+TGG | + | chr8_1:73059338-73059357 | None:intergenic | 40.0% | |
| AGGATCTTCCACAAGATGTT+CGG | + | chr8_1:73059453-73059472 | None:intergenic | 40.0% | |
| ! | CTTGCATTGTGTTACTCTTC+TGG | - | chr8_1:73059694-73059713 | Msa1213040:CDS | 40.0% |
| ! | CTTTTTGCTACAGCTTCTGA+AGG | - | chr8_1:73060102-73060121 | Msa1213040:intron | 40.0% |
| TTTGGTCCTATTAAGCATGG+TGG | - | chr8_1:73060195-73060214 | Msa1213040:CDS | 40.0% | |
| AGTCCAAGTAAGAAGCAGTA+AGG | - | chr8_1:73060218-73060237 | Msa1213040:CDS | 40.0% | |
| AGACCTTACTGCTTCTTACT+TGG | + | chr8_1:73060224-73060243 | None:intergenic | 40.0% | |
| ! | TTTCAGCATGGGTTCTGTTT+TGG | - | chr8_1:73060325-73060344 | Msa1213040:intron | 40.0% |
| GGAATATCGATAGAAGCTAG+TGG | + | chr8_1:73060546-73060565 | None:intergenic | 40.0% | |
| TGCTTTCAGAAGTTGGAACT+CGG | + | chr8_1:73060580-73060599 | None:intergenic | 40.0% | |
| CATTGTGTATGCTTTCGAAC+TGG | - | chr8_1:73060660-73060679 | Msa1213040:intron | 40.0% | |
| CTTCATCCAACAATCTAGCA+AGG | + | chr8_1:73060746-73060765 | None:intergenic | 40.0% | |
| CTACCTGTATCTACATCACA+AGG | + | chr8_1:73060940-73060959 | None:intergenic | 40.0% | |
| !! | GAGACTTGCTTTAAGTTGCT+CGG | - | chr8_1:73060979-73060998 | Msa1213040:CDS | 40.0% |
| ! | CGGCTTTTCTGTTCTGTTTT+TGG | - | chr8_1:73060999-73061018 | Msa1213040:intron | 40.0% |
| !! | AGGATAGCTTGTTCCTTTGA+AGG | + | chr8_1:73061037-73061056 | None:intergenic | 40.0% |
| ATGAAGATACCTTGCACTCA+AGG | + | chr8_1:73061156-73061175 | None:intergenic | 40.0% | |
| CTATTCATTTCTGCCCTGTT+TGG | - | chr8_1:73061310-73061329 | Msa1213040:intron | 40.0% | |
| ATTCATTTCTGCCCTGTTTG+GGG | - | chr8_1:73061312-73061331 | Msa1213040:intron | 40.0% | |
| ACTGCTACCATAATACAACC+CGG | + | chr8_1:73061424-73061443 | None:intergenic | 40.0% | |
| GTTGTATTATGGTAGCAGTG+TGG | - | chr8_1:73061425-73061444 | Msa1213040:intron | 40.0% | |
| AAACACATTCTGCTTACCAC+TGG | + | chr8_1:73061600-73061619 | None:intergenic | 40.0% | |
| CATATAGCAACCATAACCAC+AGG | - | chr8_1:73061879-73061898 | Msa1213040:CDS | 40.0% | |
| ATTTGAATGGCCTGTGGTTA+TGG | + | chr8_1:73061892-73061911 | None:intergenic | 40.0% | |
| GAAAAGATATCGAGTACACG+AGG | - | chr8_1:73062067-73062086 | Msa1213040:intron | 40.0% | |
| CATAGGACAAGTCAAAATGG+AGG | - | chr8_1:73062335-73062354 | Msa1213040:intron | 40.0% | |
| GGGTAGATGGTGTAACATTA+TGG | + | chr8_1:73062391-73062410 | None:intergenic | 40.0% | |
| TAACCAATATGCTCACACTG+GGG | + | chr8_1:73062411-73062430 | None:intergenic | 40.0% | |
| ! | ATGACCGATACAAAGCACTT+CGG | + | chr8_1:73062609-73062628 | None:intergenic | 40.0% |
| GCCTTTGCTTCAGTTGAAAT+TGG | - | chr8_1:73062833-73062852 | Msa1213040:five_prime_UTR | 40.0% | |
| ! | GCACAACTCCCATCATTTTA+TGG | + | chr8_1:73062903-73062922 | None:intergenic | 40.0% |
| AGCTAAGTAGGATTCACGTC+AGG | - | chr8_1:73057141-73057160 | Msa1213040:three_prime_UTR | 45.0% | |
| TGATCTCCGAACCAAGATAG+AGG | - | chr8_1:73057208-73057227 | Msa1213040:three_prime_UTR | 45.0% | |
| GATCTCCGAACCAAGATAGA+GGG | - | chr8_1:73057209-73057228 | Msa1213040:three_prime_UTR | 45.0% | |
| TCTCTCCCTCTATCTTGGTT+CGG | + | chr8_1:73057217-73057236 | None:intergenic | 45.0% | |
| AGTTGTCTCTCCCTCTATCT+TGG | + | chr8_1:73057222-73057241 | None:intergenic | 45.0% | |
| GGAACAAGACGAATGTTGTG+TGG | + | chr8_1:73057761-73057780 | None:intergenic | 45.0% | |
| TAAGTAAGGGCGAAAACGTG+TGG | + | chr8_1:73057814-73057833 | None:intergenic | 45.0% | |
| GAGGACTAGGAGTAGTAGAA+GGG | + | chr8_1:73058169-73058188 | None:intergenic | 45.0% | |
| TGAGGACTAGGAGTAGTAGA+AGG | + | chr8_1:73058170-73058189 | None:intergenic | 45.0% | |
| ! | ACTCCTAGTCCTCAAGTTGT+TGG | - | chr8_1:73058176-73058195 | Msa1213040:intron | 45.0% |
| TTGCCAACAACTTGAGGACT+AGG | + | chr8_1:73058182-73058201 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCCAACAACTTG+AGG | + | chr8_1:73058188-73058207 | None:intergenic | 45.0% |
| AGTTGTTGGCAATGCCTTTG+TGG | - | chr8_1:73058190-73058209 | Msa1213040:intron | 45.0% | |
| !! | ATCCACATGGTGGACAATCA+CGG | + | chr8_1:73058617-73058636 | None:intergenic | 45.0% |
| CTGTAAAGTTCTTGCCTTGG+TGG | + | chr8_1:73058653-73058672 | None:intergenic | 45.0% | |
| ! | AAACGGCTCTGTTGTTTGGT+TGG | - | chr8_1:73058700-73058719 | Msa1213040:intron | 45.0% |
| ! | CTCTGTTGTTTGGTTGGAGT+AGG | - | chr8_1:73058706-73058725 | Msa1213040:intron | 45.0% |
| TACTGGATGCTTAACTGGGA+AGG | - | chr8_1:73059145-73059164 | Msa1213040:intron | 45.0% | |
| CTTCCACAAGATGTTCGGAA+GGG | + | chr8_1:73059448-73059467 | None:intergenic | 45.0% | |
| TCTTCCACAAGATGTTCGGA+AGG | + | chr8_1:73059449-73059468 | None:intergenic | 45.0% | |
| ! | CCTTCTTCCTTGTTGTCCAT+AGG | + | chr8_1:73059527-73059546 | None:intergenic | 45.0% |
| CCTATGGACAACAAGGAAGA+AGG | - | chr8_1:73059524-73059543 | Msa1213040:intron | 45.0% | |
| GGACAACAAGGAAGAAGGAT+TGG | - | chr8_1:73059529-73059548 | Msa1213040:intron | 45.0% | |
| ATGTCTTTCGTGCATCATCC+TGG | + | chr8_1:73059637-73059656 | None:intergenic | 45.0% | |
| CTACCGCAAAATCTACTCCT+GGG | - | chr8_1:73059848-73059867 | Msa1213040:CDS | 45.0% | |
| ACTAGTGACGTTCCTGAAGA+AGG | - | chr8_1:73059910-73059929 | Msa1213040:CDS | 45.0% | |
| TGGACTCCACCATGCTTAAT+AGG | + | chr8_1:73060204-73060223 | None:intergenic | 45.0% | |
| GCTTTCAGAAGTTGGAACTC+GGG | + | chr8_1:73060579-73060598 | None:intergenic | 45.0% | |
| !! | GAACTGCTGCTTTCAGAAGT+TGG | + | chr8_1:73060587-73060606 | None:intergenic | 45.0% |
| ! | ACTTCTGAAAGCAGCAGTTC+TGG | - | chr8_1:73060587-73060606 | Msa1213040:CDS | 45.0% |
| ! | CTTCTGAAAGCAGCAGTTCT+GGG | - | chr8_1:73060588-73060607 | Msa1213040:CDS | 45.0% |
| TCGGTACCTTGCTAGATTGT+TGG | - | chr8_1:73060737-73060756 | Msa1213040:CDS | 45.0% | |
| !! | GACAGGAGAGTATTCAGTTG+AGG | + | chr8_1:73061057-73061076 | None:intergenic | 45.0% |
| !! | TGAAAGGAGAGTGCTCCTTT+GGG | - | chr8_1:73061126-73061145 | Msa1213040:intron | 45.0% |
| GAGTGGTGAAAATGCAAAGC+AGG | - | chr8_1:73061390-73061409 | Msa1213040:intron | 45.0% | |
| TGAAAATGCAAAGCAGGTGC+TGG | - | chr8_1:73061396-73061415 | Msa1213040:intron | 45.0% | |
| AATTGCTTCCTAGGTGCAAC+CGG | + | chr8_1:73061537-73061556 | None:intergenic | 45.0% | |
| CTGGCATTACTAAGGTAACG+CGG | + | chr8_1:73061581-73061600 | None:intergenic | 45.0% | |
| CGTTACCTTAGTAATGCCAG+TGG | - | chr8_1:73061581-73061600 | Msa1213040:intron | 45.0% | |
| GCTTACCACTGGCATTACTA+AGG | + | chr8_1:73061589-73061608 | None:intergenic | 45.0% | |
| TGAGAGGCAAGCTGTTATTG+AGG | - | chr8_1:73062045-73062064 | Msa1213040:intron | 45.0% | |
| !! | TAGTAAGCGATAGCGGAAGA+GGG | - | chr8_1:73062180-73062199 | Msa1213040:intron | 45.0% |
| CAGAAACCAAGGGGAATTCT+CGG | - | chr8_1:73062295-73062314 | Msa1213040:intron | 45.0% | |
| AGAAACCAAGGGGAATTCTC+GGG | - | chr8_1:73062296-73062315 | Msa1213040:intron | 45.0% | |
| CTTGTCCTATGAGAACTCCT+AGG | + | chr8_1:73062326-73062345 | None:intergenic | 45.0% | |
| AGGACAAGTCAAAATGGAGG+TGG | - | chr8_1:73062338-73062357 | Msa1213040:intron | 45.0% | |
| GGACAAGTCAAAATGGAGGT+GGG | - | chr8_1:73062339-73062358 | Msa1213040:intron | 45.0% | |
| GAAAACAAAGCAAACGCTGC+TGG | - | chr8_1:73062446-73062465 | Msa1213040:intron | 45.0% | |
| CTGCACTTGTGCCTAAACAA+GGG | + | chr8_1:73062518-73062537 | None:intergenic | 45.0% | |
| ! | ATACAAAGCACTTCGGCAAG+GGG | + | chr8_1:73062602-73062621 | None:intergenic | 45.0% |
| ! | GATACAAAGCACTTCGGCAA+GGG | + | chr8_1:73062603-73062622 | None:intergenic | 45.0% |
| ! | CTTGCCGAAGTGCTTTGTAT+CGG | - | chr8_1:73062602-73062621 | Msa1213040:intron | 45.0% |
| TTGATTGATGAGGCGAGTGT+AGG | - | chr8_1:73062787-73062806 | Msa1213040:five_prime_UTR | 45.0% | |
| ! | TTTTTCGCAGATGGCAGTGC+AGG | - | chr8_1:73058136-73058155 | Msa1213040:intron | 50.0% |
| TCTGCATCAATCGCCTGACT+TGG | - | chr8_1:73058229-73058248 | Msa1213040:intron | 50.0% | |
| TAGAACCTGTGCACCAAGTC+AGG | + | chr8_1:73058245-73058264 | None:intergenic | 50.0% | |
| ! | CTTGGTGCACAGGTTCTATC+AGG | - | chr8_1:73058247-73058266 | Msa1213040:intron | 50.0% |
| TTCCGTGATTGTCCACCATG+TGG | - | chr8_1:73058612-73058631 | Msa1213040:intron | 50.0% | |
| TCTTGCCTTGGTGGGATCTA+GGG | + | chr8_1:73058644-73058663 | None:intergenic | 50.0% | |
| TTCTTGCCTTGGTGGGATCT+AGG | + | chr8_1:73058645-73058664 | None:intergenic | 50.0% | |
| GATTGTTTCCCCCATCATCC+TGG | - | chr8_1:73058764-73058783 | Msa1213040:intron | 50.0% | |
| GCTCAGGAGTCCTATGAGAA+AGG | - | chr8_1:73059107-73059126 | Msa1213040:intron | 50.0% | |
| CTGGGAAGGATAACGTGAGA+AGG | - | chr8_1:73059159-73059178 | Msa1213040:intron | 50.0% | |
| ! | AGGGTTTTCATCCTCTGCAG+AGG | + | chr8_1:73059480-73059499 | None:intergenic | 50.0% |
| AGATCCAACTTCTGCAGTCC+AGG | - | chr8_1:73059616-73059635 | Msa1213040:intron | 50.0% | |
| TCATCCTGGACTGCAGAAGT+TGG | + | chr8_1:73059623-73059642 | None:intergenic | 50.0% | |
| GGTAGCATGCCGTTGTTCAT+TGG | + | chr8_1:73059833-73059852 | None:intergenic | 50.0% | |
| GCTACCGCAAAATCTACTCC+TGG | - | chr8_1:73059847-73059866 | Msa1213040:CDS | 50.0% | |
| ! | AGGCCCAGGAGTAGATTTTG+CGG | + | chr8_1:73059854-73059873 | None:intergenic | 50.0% |
| AAAATCTACTCCTGGGCCTG+AGG | - | chr8_1:73059855-73059874 | Msa1213040:CDS | 50.0% | |
| ! | CTTGGTGCACTGTCACTACT+AGG | + | chr8_1:73059889-73059908 | None:intergenic | 50.0% |
| CTAGTAGTGACAGTGCACCA+AGG | - | chr8_1:73059887-73059906 | Msa1213040:CDS | 50.0% | |
| TCAGGAACGTCACTAGTCCT+TGG | + | chr8_1:73059907-73059926 | None:intergenic | 50.0% | |
| TGGAACTCGGGAACTACAGA+GGG | + | chr8_1:73060567-73060586 | None:intergenic | 50.0% | |
| TTGGAACTCGGGAACTACAG+AGG | + | chr8_1:73060568-73060587 | None:intergenic | 50.0% | |
| !! | GTGAAAGGAGAGTGCTCCTT+TGG | - | chr8_1:73061125-73061144 | Msa1213040:intron | 50.0% |
| !! | GAAAGGAGAGTGCTCCTTTG+GGG | - | chr8_1:73061127-73061146 | Msa1213040:intron | 50.0% |
| CACAAAATCCGGTTGCACCT+AGG | - | chr8_1:73061526-73061545 | Msa1213040:intron | 50.0% | |
| CAGGCTTCACCTATCACTGT+TGG | - | chr8_1:73062022-73062041 | Msa1213040:intron | 50.0% | |
| ! | CACCTATCACTGTTGGTGAG+AGG | - | chr8_1:73062029-73062048 | Msa1213040:intron | 50.0% |
| TGCCTCTCACCAACAGTGAT+AGG | + | chr8_1:73062034-73062053 | None:intergenic | 50.0% | |
| !! | CTAGTAAGCGATAGCGGAAG+AGG | - | chr8_1:73062179-73062198 | Msa1213040:intron | 50.0% |
| !!! | TTTGGTGGTGGACGAGGTTT+TGG | - | chr8_1:73062260-73062279 | Msa1213040:intron | 50.0% |
| GACGACCTAGGAGTTCTCAT+AGG | - | chr8_1:73062318-73062337 | Msa1213040:intron | 50.0% | |
| CATTATGGTTCCCCACACCA+TGG | + | chr8_1:73062376-73062395 | None:intergenic | 50.0% | |
| TATGCTCACACTGGGGTAGA+TGG | + | chr8_1:73062404-73062423 | None:intergenic | 50.0% | |
| CTACCCCAGTGTGAGCATAT+TGG | - | chr8_1:73062405-73062424 | Msa1213040:intron | 50.0% | |
| CCTGCACTTGTGCCTAAACA+AGG | + | chr8_1:73062519-73062538 | None:intergenic | 50.0% | |
| ! | CCTTGTTTAGGCACAAGTGC+AGG | - | chr8_1:73062516-73062535 | Msa1213040:intron | 50.0% |
| ! | TACAAAGCACTTCGGCAAGG+GGG | + | chr8_1:73062601-73062620 | None:intergenic | 50.0% |
| ! | CGATACAAAGCACTTCGGCA+AGG | + | chr8_1:73062604-73062623 | None:intergenic | 50.0% |
| !! | AATCGCCTGACTTGGTGCAC+AGG | - | chr8_1:73058237-73058256 | Msa1213040:intron | 55.0% |
| CTTGCCTTGGTGGGATCTAG+GGG | + | chr8_1:73058643-73058662 | None:intergenic | 55.0% | |
| GCTGTGCACATGCCAGAATC+AGG | - | chr8_1:73059323-73059342 | Msa1213040:intron | 55.0% | |
| GCACCCTTCCGAACATCTTG+TGG | - | chr8_1:73059442-73059461 | Msa1213040:intron | 55.0% | |
| AGATCCTGCAACCTCTGCAG+AGG | - | chr8_1:73059466-73059485 | Msa1213040:intron | 55.0% | |
| TCATCCTCTGCAGAGGTTGC+AGG | + | chr8_1:73059473-73059492 | None:intergenic | 55.0% | |
| CTACTAGGCGCTAATGCCTC+AGG | + | chr8_1:73059874-73059893 | None:intergenic | 55.0% | |
| TGCACTCAAGGCTACCCCAA+AGG | + | chr8_1:73061144-73061163 | None:intergenic | 55.0% | |
| ! | TTGGGGTAGCCTTGAGTGCA+AGG | - | chr8_1:73061144-73061163 | Msa1213040:intron | 55.0% |
| AGTGGTCGGAGTCTAGTGAG+TGG | - | chr8_1:73061373-73061392 | Msa1213040:intron | 55.0% | |
| ! | GCTGGTGCCGGGTTGTATTA+TGG | - | chr8_1:73061414-73061433 | Msa1213040:intron | 55.0% |
| !! | TAAGCGATAGCGGAAGAGGG+AGG | - | chr8_1:73062183-73062202 | Msa1213040:intron | 55.0% |
| AGTCAAAATGGAGGTGGGCG+TGG | - | chr8_1:73062344-73062363 | Msa1213040:intron | 55.0% | |
| ! | ACAAAGCACTTCGGCAAGGG+GGG | + | chr8_1:73062600-73062619 | None:intergenic | 55.0% |
| CACGTGCGTGCATACCAGCT+TGG | + | chr8_1:73057317-73057336 | None:intergenic | 60.0% | |
| AGATCGGGTTTGGGCAGAGC+AGG | - | chr8_1:73058027-73058046 | Msa1213040:intron | 60.0% | |
| GATCGGGTTTGGGCAGAGCA+GGG | - | chr8_1:73058028-73058047 | Msa1213040:intron | 60.0% | |
| GATCTAGGGGCGGATCCACA+TGG | + | chr8_1:73058630-73058649 | None:intergenic | 60.0% | |
| CAGACGCCACTCTTGCAGCT+CGG | + | chr8_1:73059804-73059823 | None:intergenic | 60.0% | |
| !! | TGCAAAGCAGGTGCTGGTGC+CGG | - | chr8_1:73061402-73061421 | Msa1213040:intron | 60.0% |
| !! | CGGAAGAGGGAGGCATCCTT+CGG | - | chr8_1:73062193-73062212 | Msa1213040:intron | 60.0% |
| !! | GGAAGAGGGAGGCATCCTTC+GGG | - | chr8_1:73062194-73062213 | Msa1213040:intron | 60.0% |
| AGGCATCCTTCGGGAAGAGG+TGG | - | chr8_1:73062203-73062222 | Msa1213040:intron | 60.0% | |
| CGGAAACCACCTCTTCCCGA+AGG | + | chr8_1:73062212-73062231 | None:intergenic | 60.0% | |
| TCGGGAAGAGGTGGTTTCCG+AGG | - | chr8_1:73062212-73062231 | Msa1213040:intron | 60.0% | |
| AAGAGGTGGTTTCCGAGGCG+AGG | - | chr8_1:73062217-73062236 | Msa1213040:intron | 60.0% | |
| AGAGGTGGTTTCCGAGGCGA+GGG | - | chr8_1:73062218-73062237 | Msa1213040:intron | 60.0% | |
| GTTTCCGAGGCGAGGGTTTC+CGG | - | chr8_1:73062225-73062244 | Msa1213040:intron | 60.0% | |
| TTTCCGAGGCGAGGGTTTCC+GGG | - | chr8_1:73062226-73062245 | Msa1213040:intron | 60.0% | |
| !! | GGGAGATTTGGTGGTGGACG+AGG | - | chr8_1:73062254-73062273 | Msa1213040:intron | 60.0% |
| GTCGTCCCGAGAATTCCCCT+TGG | + | chr8_1:73062304-73062323 | None:intergenic | 60.0% | |
| GGGAATTCTCGGGACGACCT+AGG | - | chr8_1:73062306-73062325 | Msa1213040:intron | 60.0% | |
| CAAAATGGAGGTGGGCGTGG+TGG | - | chr8_1:73062347-73062366 | Msa1213040:intron | 60.0% | |
| ! | CAAAGCACTTCGGCAAGGGG+GGG | + | chr8_1:73062599-73062618 | None:intergenic | 60.0% |
| CTAGGGGCGGATCCACATGG+TGG | + | chr8_1:73058627-73058646 | None:intergenic | 65.0% | |
| TCCGCCCCTAGATCCCACCA+AGG | - | chr8_1:73058636-73058655 | Msa1213040:intron | 65.0% | |
| GCCTTGGTGGGATCTAGGGG+CGG | + | chr8_1:73058640-73058659 | None:intergenic | 65.0% | |
| TCCCAGCCGAGCTGCAAGAG+TGG | - | chr8_1:73059795-73059814 | Msa1213040:intron | 65.0% | |
| GCCACTCTTGCAGCTCGGCT+GGG | + | chr8_1:73059799-73059818 | None:intergenic | 65.0% | |
| !! | GCAAAGCAGGTGCTGGTGCC+GGG | - | chr8_1:73061403-73061422 | Msa1213040:intron | 65.0% |
| !! | GGGAGGCATCCTTCGGGAAG+AGG | - | chr8_1:73062200-73062219 | Msa1213040:intron | 65.0% |
| TTCCGAGGCGAGGGTTTCCG+GGG | - | chr8_1:73062227-73062246 | Msa1213040:intron | 65.0% | |
| ! | TTCCGGGGGCGTGGGAGATT+TGG | - | chr8_1:73062242-73062261 | Msa1213040:intron | 65.0% |
| CACCAAATCTCCCACGCCCC+CGG | + | chr8_1:73062247-73062266 | None:intergenic | 65.0% | |
| !! | GGGCGTGGGAGATTTGGTGG+TGG | - | chr8_1:73062248-73062267 | Msa1213040:intron | 65.0% |
| !! | CGTGGTGGACGCCATGGTGT+GGG | - | chr8_1:73062362-73062381 | Msa1213040:intron | 65.0% |
| !! | GTGGTGGACGCCATGGTGTG+GGG | - | chr8_1:73062363-73062382 | Msa1213040:intron | 65.0% |
| CGGGTTTGGGCAGAGCAGGG+TGG | - | chr8_1:73058031-73058050 | Msa1213040:intron | 70.0% | |
| CGCCACTCTTGCAGCTCGGC+TGG | + | chr8_1:73059800-73059819 | None:intergenic | 70.0% | |
| GGCGCTAATGCCTCAGGCCC+AGG | + | chr8_1:73059868-73059887 | None:intergenic | 70.0% | |
| TCCGAGGCGAGGGTTTCCGG+GGG | - | chr8_1:73062228-73062247 | Msa1213040:intron | 70.0% | |
| ! | CGGGGGCGTGGGAGATTTGG+TGG | - | chr8_1:73062245-73062264 | Msa1213040:intron | 70.0% |
| !! | GCGTGGTGGACGCCATGGTG+TGG | - | chr8_1:73062361-73062380 | Msa1213040:intron | 70.0% |
| GCCCCCGGAAACCCTCGCCT+CGG | + | chr8_1:73062232-73062251 | None:intergenic | 75.0% | |
| ! | GCGAGGGTTTCCGGGGGCGT+GGG | - | chr8_1:73062234-73062253 | Msa1213040:intron | 75.0% |
| !! | GGTGGGCGTGGTGGACGCCA+TGG | - | chr8_1:73062356-73062375 | Msa1213040:intron | 75.0% |
| ! | GGCGAGGGTTTCCGGGGGCG+TGG | - | chr8_1:73062233-73062252 | Msa1213040:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73057129 | 73062929 | 73057129 | ID=Msa1213040;Name=Msa1213040 |
| chr8_1 | mRNA | 73057129 | 73062929 | 73057129 | ID=Msa1213040-mRNA-1;Parent=Msa1213040;Name=Msa1213040-mRNA-1;_AED=0.22;_eAED=0.22;_QI=193|0.88|0.8|1|0.66|0.8|10|511|440 |
| chr8_1 | exon | 73057129 | 73057875 | 73057129 | ID=Msa1213040-mRNA-1:exon:24785;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73057970 | 73058033 | 73057970 | ID=Msa1213040-mRNA-1:exon:24784;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73059665 | 73059727 | 73059665 | ID=Msa1213040-mRNA-1:exon:24783;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73059819 | 73059943 | 73059819 | ID=Msa1213040-mRNA-1:exon:24782;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73060127 | 73060301 | 73060127 | ID=Msa1213040-mRNA-1:exon:24781;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73060388 | 73060623 | 73060388 | ID=Msa1213040-mRNA-1:exon:24780;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73060714 | 73060808 | 73060714 | ID=Msa1213040-mRNA-1:exon:24779;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73060875 | 73061017 | 73060875 | ID=Msa1213040-mRNA-1:exon:24778;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73061727 | 73061912 | 73061727 | ID=Msa1213040-mRNA-1:exon:24777;Parent=Msa1213040-mRNA-1 |
| chr8_1 | exon | 73062737 | 73062929 | 73062737 | ID=Msa1213040-mRNA-1:exon:24776;Parent=Msa1213040-mRNA-1 |
| chr8_1 | five_prime_UTR | 73062737 | 73062929 | 73062737 | ID=Msa1213040-mRNA-1:five_prime_utr;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73061727 | 73061912 | 73061727 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73060875 | 73061017 | 73060875 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73060714 | 73060808 | 73060714 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73060388 | 73060623 | 73060388 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73060127 | 73060301 | 73060127 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73059819 | 73059943 | 73059819 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73059665 | 73059727 | 73059665 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73057970 | 73058033 | 73057970 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | CDS | 73057640 | 73057875 | 73057640 | ID=Msa1213040-mRNA-1:cds;Parent=Msa1213040-mRNA-1 |
| chr8_1 | three_prime_UTR | 73057129 | 73057639 | 73057129 | ID=Msa1213040-mRNA-1:three_prime_utr;Parent=Msa1213040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
