Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305430 | XP_003597973.1 | 92.174 | 230 | 15 | 3 | 6 | 234 | 2 | 229 | 1.93e-148 | 423 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305430 | sp|Q9T072|BH025_ARATH | 40.306 | 196 | 102 | 5 | 38 | 225 | 133 | 321 | 5.64e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305430 | G7IMB4 | 92.174 | 230 | 15 | 3 | 6 | 234 | 2 | 229 | 9.21e-149 | 423 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0305430 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0227140 | Msa0305430 | 0.855268 | 7.071714e-62 | -8.615850e-47 |
| Msa0227490 | Msa0305430 | 0.811657 | 6.274910e-51 | -8.615850e-47 |
| Msa0227500 | Msa0305430 | 0.805219 | 1.483360e-49 | -8.615850e-47 |
| Msa0305430 | Msa0344070 | 0.810883 | 9.238448e-51 | -8.615850e-47 |
| Msa0305430 | Msa0575250 | 0.811198 | 7.891869e-51 | -8.615850e-47 |
| Msa0305430 | Msa0619330 | 0.801352 | 9.376831e-49 | -8.615850e-47 |
| Msa0305430 | Msa1254770 | 0.814440 | 1.538852e-51 | -8.615850e-47 |
| Msa0305430 | Msa1254800 | 0.817144 | 3.839585e-52 | -8.615850e-47 |
| Msa0305430 | Msa1326000 | 0.807427 | 5.082136e-50 | -8.615850e-47 |
| Msa0305430 | Msa1415110 | 0.857418 | 1.655074e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305430 | MtrunA17_Chr2g0333611 | 92.342 | 222 | 14 | 3 | 14 | 234 | 1 | 220 | 1.36e-146 | 407 |
| Msa0305430 | MtrunA17_Chr2g0333621 | 46.798 | 203 | 93 | 3 | 37 | 231 | 118 | 313 | 1.07e-51 | 170 |
| Msa0305430 | MtrunA17_Chr8g0336681 | 46.231 | 199 | 94 | 3 | 45 | 233 | 144 | 339 | 1.08e-50 | 168 |
| Msa0305430 | MtrunA17_Chr4g0002801 | 47.692 | 195 | 86 | 3 | 47 | 230 | 142 | 331 | 3.64e-50 | 166 |
| Msa0305430 | MtrunA17_Chr4g0002781 | 47.396 | 192 | 88 | 3 | 47 | 230 | 164 | 350 | 5.18e-48 | 161 |
| Msa0305430 | MtrunA17_Chr2g0333641 | 45.128 | 195 | 95 | 3 | 37 | 226 | 117 | 304 | 1.48e-43 | 149 |
| Msa0305430 | MtrunA17_Chr5g0400661 | 43.316 | 187 | 85 | 5 | 56 | 225 | 148 | 330 | 1.07e-41 | 144 |
| Msa0305430 | MtrunA17_Chr5g0400621 | 42.553 | 188 | 94 | 4 | 50 | 230 | 150 | 330 | 7.32e-41 | 142 |
| Msa0305430 | MtrunA17_Chr2g0280161 | 43.258 | 178 | 90 | 4 | 54 | 225 | 174 | 346 | 3.57e-40 | 141 |
| Msa0305430 | MtrunA17_Chr5g0400671 | 41.304 | 184 | 101 | 4 | 48 | 229 | 145 | 323 | 4.34e-39 | 137 |
| Msa0305430 | MtrunA17_Chr4g0054581 | 41.667 | 204 | 101 | 7 | 38 | 231 | 181 | 376 | 6.23e-39 | 138 |
| Msa0305430 | MtrunA17_Chr7g0249811 | 45.745 | 188 | 92 | 4 | 47 | 233 | 154 | 332 | 2.58e-38 | 135 |
| Msa0305430 | MtrunA17_Chr2g0307131 | 36.364 | 198 | 123 | 3 | 38 | 234 | 161 | 356 | 5.91e-38 | 135 |
| Msa0305430 | MtrunA17_Chr4g0049331 | 40.449 | 178 | 90 | 4 | 56 | 225 | 134 | 303 | 1.52e-37 | 133 |
| Msa0305430 | MtrunA17_Chr2g0333541 | 43.541 | 209 | 93 | 6 | 31 | 225 | 67 | 264 | 6.07e-37 | 130 |
| Msa0305430 | MtrunA17_Chr6g0468491 | 39.109 | 202 | 114 | 4 | 34 | 231 | 115 | 311 | 2.86e-36 | 130 |
| Msa0305430 | MtrunA17_Chr4g0054561 | 39.785 | 186 | 102 | 5 | 50 | 231 | 148 | 327 | 1.46e-35 | 128 |
| Msa0305430 | MtrunA17_Chr4g0033391 | 36.082 | 194 | 119 | 2 | 38 | 231 | 130 | 318 | 4.15e-35 | 127 |
| Msa0305430 | MtrunA17_Chr2g0307141 | 37.288 | 177 | 109 | 2 | 56 | 231 | 182 | 357 | 8.66e-35 | 127 |
| Msa0305430 | MtrunA17_Chr4g0033291 | 39.894 | 188 | 108 | 2 | 44 | 231 | 144 | 326 | 2.46e-34 | 125 |
| Msa0305430 | MtrunA17_Chr4g0054621 | 34.419 | 215 | 116 | 4 | 35 | 231 | 132 | 339 | 5.34e-34 | 124 |
| Msa0305430 | MtrunA17_Chr4g0054551 | 37.968 | 187 | 104 | 5 | 50 | 231 | 148 | 327 | 1.24e-33 | 123 |
| Msa0305430 | MtrunA17_Chr4g0033281 | 36.181 | 199 | 99 | 4 | 44 | 231 | 142 | 323 | 8.79e-33 | 121 |
| Msa0305430 | MtrunA17_Chr7g0225901 | 36.967 | 211 | 106 | 8 | 16 | 209 | 40 | 240 | 1.56e-32 | 119 |
| Msa0305430 | MtrunA17_Chr4g0054571 | 37.745 | 204 | 104 | 4 | 43 | 231 | 136 | 331 | 2.62e-29 | 112 |
| Msa0305430 | MtrunA17_Chr6g0468461 | 34.021 | 194 | 101 | 4 | 16 | 209 | 145 | 311 | 4.88e-28 | 108 |
| Msa0305430 | MtrunA17_Chr5g0400641 | 36.810 | 163 | 89 | 4 | 60 | 215 | 1 | 156 | 9.11e-27 | 101 |
| Msa0305430 | MtrunA17_Chr4g0002831 | 37.725 | 167 | 92 | 4 | 60 | 225 | 45 | 200 | 5.70e-26 | 100 |
| Msa0305430 | MtrunA17_Chr7g0233441 | 30.667 | 225 | 123 | 5 | 1 | 225 | 1 | 192 | 1.56e-25 | 99.0 |
| Msa0305430 | MtrunA17_Chr4g0002851 | 30.131 | 229 | 119 | 7 | 1 | 225 | 1 | 192 | 3.20e-25 | 98.2 |
| Msa0305430 | MtrunA17_Chr8g0336671 | 52.308 | 65 | 29 | 1 | 23 | 87 | 3 | 65 | 3.95e-14 | 65.5 |
| Msa0305430 | MtrunA17_Chr1g0185621 | 28.777 | 139 | 91 | 2 | 58 | 188 | 476 | 614 | 3.79e-13 | 68.2 |
| Msa0305430 | MtrunA17_Chr7g0275821 | 25.294 | 170 | 118 | 4 | 58 | 227 | 253 | 413 | 4.08e-13 | 67.8 |
| Msa0305430 | MtrunA17_Chr2g0298751 | 22.581 | 217 | 142 | 4 | 30 | 233 | 34 | 237 | 1.01e-11 | 62.8 |
| Msa0305430 | MtrunA17_Chr5g0411341 | 29.787 | 188 | 107 | 8 | 58 | 228 | 494 | 673 | 2.57e-11 | 62.8 |
| Msa0305430 | MtrunA17_Chr8g0386921 | 47.273 | 55 | 29 | 0 | 58 | 112 | 407 | 461 | 9.44e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305430 | AT4G37850.2 | 40.306 | 196 | 102 | 5 | 38 | 225 | 133 | 321 | 5.74e-35 | 127 |
| Msa0305430 | AT4G37850.1 | 40.306 | 196 | 102 | 5 | 38 | 225 | 133 | 321 | 5.74e-35 | 127 |
| Msa0305430 | AT2G22760.1 | 37.634 | 186 | 99 | 5 | 40 | 217 | 106 | 282 | 1.30e-34 | 125 |
| Msa0305430 | AT2G22760.2 | 38.202 | 178 | 93 | 5 | 40 | 209 | 106 | 274 | 3.28e-32 | 119 |
| Msa0305430 | AT2G22770.1 | 38.542 | 192 | 91 | 5 | 55 | 225 | 130 | 315 | 1.98e-31 | 117 |
| Msa0305430 | AT2G22750.2 | 37.688 | 199 | 96 | 5 | 49 | 231 | 118 | 304 | 2.07e-29 | 112 |
| Msa0305430 | AT2G22750.5 | 37.688 | 199 | 96 | 5 | 49 | 231 | 142 | 328 | 3.13e-29 | 112 |
| Msa0305430 | AT2G22750.3 | 37.688 | 199 | 96 | 5 | 49 | 231 | 146 | 332 | 3.79e-29 | 112 |
| Msa0305430 | AT2G22750.1 | 37.688 | 199 | 95 | 6 | 49 | 231 | 118 | 303 | 6.01e-28 | 108 |
| Msa0305430 | AT2G22750.4 | 37.688 | 199 | 95 | 6 | 49 | 231 | 146 | 331 | 9.61e-28 | 108 |
| Msa0305430 | AT4G09820.1 | 32.394 | 142 | 76 | 3 | 43 | 184 | 349 | 470 | 1.55e-15 | 75.5 |
| Msa0305430 | AT5G57150.3 | 25.822 | 213 | 125 | 7 | 1 | 197 | 9 | 204 | 2.13e-13 | 67.4 |
| Msa0305430 | AT5G57150.2 | 25.822 | 213 | 125 | 7 | 1 | 197 | 9 | 204 | 2.38e-13 | 67.4 |
| Msa0305430 | AT4G29930.6 | 24.554 | 224 | 137 | 7 | 3 | 218 | 10 | 209 | 3.02e-13 | 67.0 |
| Msa0305430 | AT5G57150.4 | 25.822 | 213 | 125 | 7 | 1 | 197 | 9 | 204 | 4.40e-13 | 67.4 |
| Msa0305430 | AT5G57150.1 | 25.217 | 230 | 140 | 7 | 1 | 215 | 9 | 221 | 5.43e-13 | 66.6 |
| Msa0305430 | AT4G29930.2 | 23.394 | 218 | 144 | 5 | 3 | 218 | 10 | 206 | 6.20e-13 | 66.2 |
| Msa0305430 | AT5G57150.5 | 25.943 | 212 | 125 | 7 | 1 | 197 | 9 | 203 | 1.51e-12 | 65.1 |
| Msa0305430 | AT5G46760.1 | 25.824 | 182 | 104 | 3 | 58 | 213 | 416 | 592 | 1.63e-12 | 66.6 |
| Msa0305430 | AT1G63650.3 | 29.412 | 153 | 86 | 4 | 54 | 186 | 402 | 552 | 3.16e-12 | 65.9 |
| Msa0305430 | AT1G63650.1 | 29.412 | 153 | 86 | 4 | 54 | 186 | 402 | 552 | 3.16e-12 | 65.9 |
| Msa0305430 | AT1G63650.2 | 29.412 | 153 | 86 | 4 | 54 | 186 | 402 | 552 | 3.16e-12 | 65.9 |
| Msa0305430 | AT5G41315.2 | 26.752 | 157 | 90 | 3 | 54 | 186 | 446 | 601 | 3.53e-12 | 65.9 |
| Msa0305430 | AT5G41315.3 | 26.752 | 157 | 90 | 3 | 54 | 186 | 443 | 598 | 3.62e-12 | 65.9 |
| Msa0305430 | AT5G41315.1 | 26.752 | 157 | 90 | 3 | 54 | 186 | 438 | 593 | 3.75e-12 | 65.9 |
| Msa0305430 | AT4G29930.5 | 23.469 | 196 | 128 | 4 | 3 | 196 | 10 | 185 | 4.69e-12 | 63.9 |
| Msa0305430 | AT1G12860.1 | 24.713 | 174 | 123 | 3 | 58 | 224 | 268 | 440 | 6.83e-12 | 64.7 |
| Msa0305430 | AT1G01260.1 | 27.586 | 174 | 100 | 5 | 54 | 227 | 430 | 577 | 7.96e-12 | 64.7 |
| Msa0305430 | AT1G01260.2 | 27.586 | 174 | 100 | 5 | 54 | 227 | 430 | 577 | 7.96e-12 | 64.7 |
| Msa0305430 | AT1G01260.3 | 27.586 | 174 | 100 | 5 | 54 | 227 | 430 | 577 | 7.96e-12 | 64.7 |
| Msa0305430 | AT2G46510.1 | 39.394 | 66 | 40 | 0 | 58 | 123 | 396 | 461 | 8.62e-12 | 64.7 |
| Msa0305430 | AT4G17880.1 | 28.415 | 183 | 105 | 7 | 58 | 228 | 417 | 585 | 3.46e-11 | 62.8 |
| Msa0305430 | AT4G29930.1 | 23.013 | 239 | 148 | 8 | 3 | 218 | 10 | 235 | 3.57e-11 | 61.6 |
| Msa0305430 | AT1G12860.2 | 26.144 | 153 | 105 | 3 | 58 | 203 | 268 | 419 | 5.40e-11 | 62.0 |
| Msa0305430 | AT1G32640.1 | 25.000 | 140 | 98 | 2 | 58 | 193 | 453 | 589 | 6.41e-11 | 62.0 |
Find 63 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCACGTAATGATAATT+TGG | 0.206550 | 2_3:+63124140 | Msa0305430:CDS |
| ATGCCAATGGCCTCTACTTC+AGG | 0.262770 | 2_3:-63124183 | None:intergenic |
| CCATGTGTAGCAGCATTATT+AGG | 0.265823 | 2_3:-63122437 | None:intergenic |
| GGAGAATTGGTTCTCTAATA+TGG | 0.295421 | 2_3:+63122221 | Msa0305430:CDS |
| CAGAAGCATCCAACAATAAT+AGG | 0.297499 | 2_3:+63122395 | Msa0305430:CDS |
| TTCTTAAGAGTTGGAGTTGT+AGG | 0.299359 | 2_3:+63126323 | Msa0305430:three_prime_UTR |
| ACATAATGTCAGAGAGAAAA+AGG | 0.300304 | 2_3:+63122501 | Msa0305430:CDS |
| GTATTTATCGGGTGATTCTA+TGG | 0.309469 | 2_3:-63122151 | None:intergenic |
| TTAGGTATAGATAAAGTAAA+AGG | 0.327176 | 2_3:-63122183 | None:intergenic |
| GAACAATGTCCTATTATTGT+TGG | 0.353321 | 2_3:-63122404 | None:intergenic |
| ATAGACAAGGTTTCTGTACT+TGG | 0.374394 | 2_3:+63124000 | Msa0305430:CDS |
| TGGAGAATTGGTGGGAGAAT+TGG | 0.381146 | 2_3:+63122208 | Msa0305430:CDS |
| ACCAGTAGTGTGCTTCCATT+TGG | 0.382968 | 2_3:+63124312 | Msa0305430:CDS |
| GTTCAAACTATTGTCAATGC+TGG | 0.402081 | 2_3:+63124266 | Msa0305430:CDS |
| CTATACCTAACATGGAGAAT+TGG | 0.414546 | 2_3:+63122196 | Msa0305430:exon |
| AGAGAGATTCATAGCACTTT+CGG | 0.417342 | 2_3:+63122538 | Msa0305430:CDS |
| GGCAGATGGGTGAGGAATAC+AGG | 0.417383 | 2_3:+63124451 | Msa0305430:intron |
| ATTGATGACAAAGTTGAAAC+AGG | 0.417457 | 2_3:+63124488 | Msa0305430:CDS |
| TCCCACCAATTCTCCATGTT+AGG | 0.422680 | 2_3:-63122201 | None:intergenic |
| TCTTAAGAGTTGGAGTTGTA+GGG | 0.440373 | 2_3:+63126324 | Msa0305430:three_prime_UTR |
| AAGTTATAGTTCTTAAGAGT+TGG | 0.441351 | 2_3:+63126314 | Msa0305430:three_prime_UTR |
| TTCAGGGAGGAGCACATGAT+TGG | 0.449356 | 2_3:-63124166 | None:intergenic |
| AAACATTACCTTAGCAATGA+TGG | 0.455229 | 2_3:-63124355 | None:intergenic |
| AAGGAGAGGGATCGTGAAGC+TGG | 0.456447 | 2_3:-63122088 | None:intergenic |
| AGGAGGGTATCTGTATTTAT+CGG | 0.461686 | 2_3:-63122163 | None:intergenic |
| AATAATTGTGTGTGAAGGAG+AGG | 0.462148 | 2_3:-63122102 | None:intergenic |
| CTACACATGGAAAGAATAAG+AGG | 0.462322 | 2_3:+63122450 | Msa0305430:CDS |
| TGTTGGATGCTTCTGATTGA+AGG | 0.471742 | 2_3:-63122387 | None:intergenic |
| TGCCAATGGCCTCTACTTCA+GGG | 0.476384 | 2_3:-63124182 | None:intergenic |
| CTTCTCTGATTCTATGCCAA+TGG | 0.479471 | 2_3:-63124196 | None:intergenic |
| TCCAAATGGAAGCACACTAC+TGG | 0.493687 | 2_3:-63124313 | None:intergenic |
| TAAAGAACGCATATCAATGC+TGG | 0.499426 | 2_3:+63124050 | Msa0305430:CDS |
| GGTATAGATAAAGTAAAAGG+AGG | 0.507865 | 2_3:-63122180 | None:intergenic |
| GGAGGGTATCTGTATTTATC+GGG | 0.511314 | 2_3:-63122162 | None:intergenic |
| AGCAATGATGGTAATGTTGA+GGG | 0.515073 | 2_3:-63124343 | None:intergenic |
| CCTAATAATGCTGCTACACA+TGG | 0.515165 | 2_3:+63122437 | Msa0305430:CDS |
| TACCTAACATGGAGAATTGG+TGG | 0.525198 | 2_3:+63122199 | Msa0305430:exon |
| TATGATACCCGGCTTGAAGA+AGG | 0.532421 | 2_3:+63122562 | Msa0305430:CDS |
| TACTTTATCTATACCTAACA+TGG | 0.533893 | 2_3:+63122188 | Msa0305430:exon |
| CTCCCTGAAGTAGAGGCCAT+TGG | 0.547128 | 2_3:+63124180 | Msa0305430:CDS |
| GCACTTTCGGCTATGATACC+CGG | 0.547609 | 2_3:+63122551 | Msa0305430:CDS |
| GGAACTGACCTTCTTCAAGC+CGG | 0.556400 | 2_3:-63122570 | None:intergenic |
| TAGCAATGATGGTAATGTTG+AGG | 0.557198 | 2_3:-63124344 | None:intergenic |
| TAAGAGGGTGAGAAGCTCAT+GGG | 0.563045 | 2_3:+63122466 | Msa0305430:CDS |
| CAACATTACCATCATTGCTA+AGG | 0.570598 | 2_3:+63124347 | Msa0305430:CDS |
| AAATGGAAGCACACTACTGG+TGG | 0.570834 | 2_3:-63124310 | None:intergenic |
| GTATAGATAAAGTAAAAGGA+GGG | 0.576956 | 2_3:-63122179 | None:intergenic |
| ATAAGAGGGTGAGAAGCTCA+TGG | 0.579940 | 2_3:+63122465 | Msa0305430:CDS |
| GAACTGACCTTCTTCAAGCC+GGG | 0.582458 | 2_3:-63122569 | None:intergenic |
| GGGTATGAATGTGAACAGAA+AGG | 0.582478 | 2_3:+63126344 | Msa0305430:three_prime_UTR |
| ATAATTGTGTGTGAAGGAGA+GGG | 0.583451 | 2_3:-63122101 | None:intergenic |
| ACCTAACATGGAGAATTGGT+GGG | 0.590580 | 2_3:+63122200 | Msa0305430:exon |
| CACTACTGGTGGAAACATAG+AGG | 0.596342 | 2_3:-63124299 | None:intergenic |
| TGTGCTCCTCCCTGAAGTAG+AGG | 0.602550 | 2_3:+63124173 | Msa0305430:CDS |
| ATCAACTGTGAGAAACATGA+AGG | 0.603620 | 2_3:+63124237 | Msa0305430:CDS |
| AGAAGCTCATGGGAGATACA+AGG | 0.603853 | 2_3:+63122476 | Msa0305430:CDS |
| TAATATTAGATACACTAGCA+TGG | 0.637730 | 2_3:-63124545 | None:intergenic |
| GAATCCAAATTATCATTACG+TGG | 0.646914 | 2_3:-63124144 | None:intergenic |
| CATTGGCATAGAATCAGAGA+AGG | 0.647651 | 2_3:+63124197 | Msa0305430:CDS |
| TACACATGGAAAGAATAAGA+GGG | 0.651853 | 2_3:+63122451 | Msa0305430:CDS |
| TGGAGCAACAATGTTATGAG+AGG | 0.657981 | 2_3:+63124070 | Msa0305430:CDS |
| TTTACTTGTATAGATAGACA+AGG | 0.695353 | 2_3:+63123987 | Msa0305430:intron |
| CAATGGCCTCTACTTCAGGG+AGG | 0.745278 | 2_3:-63124179 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATTAAAATTGTAT+TGG | + | chr2_3:63122911-63122930 | Msa0305430:intron | 10.0% |
| !!! | CTTTTTTTTACAATATTTAA+TGG | + | chr2_3:63123019-63123038 | Msa0305430:intron | 10.0% |
| !! | ATTAAATAATAAATTAACAC+AGG | + | chr2_3:63123598-63123617 | Msa0305430:intron | 10.0% |
| !!! | AAATTTTTTAATAGAGATTA+TGG | - | chr2_3:63124115-63124134 | None:intergenic | 10.0% |
| !!! | ATTAACTTTTTATAATGGAT+AGG | + | chr2_3:63122683-63122702 | Msa0305430:intron | 15.0% |
| !! | TACAATATAATTGAATTACT+TGG | - | chr2_3:63123075-63123094 | None:intergenic | 15.0% |
| !! | TTGATAAAATGTTAATTACA+TGG | + | chr2_3:63124419-63124438 | Msa0305430:intron | 15.0% |
| !! | TCTTATATATATATAGAGTT+TGG | + | chr2_3:63124632-63124651 | Msa0305430:intron | 15.0% |
| !! | AAAAAAATAATTGTGTGTGA+AGG | - | chr2_3:63122110-63122129 | None:intergenic | 20.0% |
| !! | TTAGGTATAGATAAAGTAAA+AGG | - | chr2_3:63122186-63122205 | None:intergenic | 20.0% |
| !! | AAAAAATCTATAGGATATGA+AGG | + | chr2_3:63122352-63122371 | Msa0305430:intron | 20.0% |
| !! | AAAAATCTATAGGATATGAA+GGG | + | chr2_3:63122353-63122372 | Msa0305430:intron | 20.0% |
| !! | AAAAGTTTGAGTATTTATTG+AGG | + | chr2_3:63122876-63122895 | Msa0305430:intron | 20.0% |
| !! | AAAGTTTGAGTATTTATTGA+GGG | + | chr2_3:63122877-63122896 | Msa0305430:intron | 20.0% |
| !! | TTGTAAGATGTTTAAATAGT+GGG | - | chr2_3:63123118-63123137 | None:intergenic | 20.0% |
| !! | TTTGTAAGATGTTTAAATAG+TGG | - | chr2_3:63123119-63123138 | None:intergenic | 20.0% |
| !! | ATTAATTTAGTTGAGATACA+TGG | - | chr2_3:63123310-63123329 | None:intergenic | 20.0% |
| !!! | ATTTTTAGTATAGTCATTAG+AGG | + | chr2_3:63123393-63123412 | Msa0305430:intron | 20.0% |
| !!! | ATAATTAAGCTTGTTAAGTT+TGG | - | chr2_3:63123464-63123483 | None:intergenic | 20.0% |
| !! | GACATAAAATAAATTAACAC+AGG | + | chr2_3:63123528-63123547 | Msa0305430:intron | 20.0% |
| !! | AAATAAAGAGTGAGAATAAA+AGG | + | chr2_3:63123797-63123816 | Msa0305430:intron | 20.0% |
| !! | AATAAAGAGTGAGAATAAAA+GGG | + | chr2_3:63123798-63123817 | Msa0305430:intron | 20.0% |
| !!! | TTCAAGTATTTTTGTTGATA+AGG | + | chr2_3:63123849-63123868 | Msa0305430:intron | 20.0% |
| !!! | TTTTTACACTCTTAAGTTTT+AGG | + | chr2_3:63123917-63123936 | Msa0305430:intron | 20.0% |
| !!! | TTAATTACATGGATTTTATG+TGG | + | chr2_3:63124430-63124449 | Msa0305430:intron | 20.0% |
| !! | TAGTGTATCTAATATTATCA+AGG | + | chr2_3:63124551-63124570 | Msa0305430:intron | 20.0% |
| !!! | ATTTTGTTTCCTTGATAATA+TGG | - | chr2_3:63124563-63124582 | None:intergenic | 20.0% |
| ! | GTATAGATAAAGTAAAAGGA+GGG | - | chr2_3:63122182-63122201 | None:intergenic | 25.0% |
| ! | TACTTTATCTATACCTAACA+TGG | + | chr2_3:63122188-63122207 | Msa0305430:exon | 25.0% |
| !!! | CTATAGATTTTTTTGACAGA+GGG | - | chr2_3:63122345-63122364 | None:intergenic | 25.0% |
| ! | ATATATTGAAGAAGAATTGC+AGG | - | chr2_3:63122594-63122613 | None:intergenic | 25.0% |
| ! | AAGCATGGAAATACTAAATA+TGG | + | chr2_3:63122639-63122658 | Msa0305430:intron | 25.0% |
| !! | CTAAATATGGATTAAACATG+AGG | + | chr2_3:63122652-63122671 | Msa0305430:intron | 25.0% |
| !!! | TGTCTTGTTCTTTTAAAGTA+AGG | - | chr2_3:63122822-63122841 | None:intergenic | 25.0% |
| ! | TTGTATTTAGTAGTGATACA+TGG | + | chr2_3:63123090-63123109 | Msa0305430:intron | 25.0% |
| ! | TGTAAGATGTTTAAATAGTG+GGG | - | chr2_3:63123117-63123136 | None:intergenic | 25.0% |
| ! | TACAAGATTAATTCAGTTCA+TGG | + | chr2_3:63123188-63123207 | Msa0305430:intron | 25.0% |
| !! | TTGGCTTATCAATGTATTTT+GGG | - | chr2_3:63123354-63123373 | None:intergenic | 25.0% |
| !!! | TTTGGCTTATCAATGTATTT+TGG | - | chr2_3:63123355-63123374 | None:intergenic | 25.0% |
| ! | AATACATTGATAAGCCAAAA+AGG | + | chr2_3:63123356-63123375 | Msa0305430:intron | 25.0% |
| !! | AGATTTTCTTTGTTCCTTTT+TGG | - | chr2_3:63123373-63123392 | None:intergenic | 25.0% |
| ! | TTTACTTGTATAGATAGACA+AGG | + | chr2_3:63123987-63124006 | Msa0305430:intron | 25.0% |
| ! | TAATATTAGATACACTAGCA+TGG | - | chr2_3:63124548-63124567 | None:intergenic | 25.0% |
| ! | TTGGATAAAAGGAGATTAAA+GGG | + | chr2_3:63124813-63124832 | Msa0305430:intron | 25.0% |
| !!! | AGAGTTTTAAGATACCTTAA+AGG | - | chr2_3:63125308-63125327 | None:intergenic | 25.0% |
| ! | TGAGTAATATATGTGATATC+AGG | + | chr2_3:63125383-63125402 | Msa0305430:intron | 25.0% |
| ! | TCAGCTTATAGAAGATTAAT+TGG | - | chr2_3:63125437-63125456 | None:intergenic | 25.0% |
| ! | TCATTATAGAGCTTAATAGA+AGG | + | chr2_3:63125482-63125501 | Msa0305430:intron | 25.0% |
| ! | CATTATAGAGCTTAATAGAA+GGG | + | chr2_3:63125483-63125502 | Msa0305430:intron | 25.0% |
| !!! | GCTTTTAAAATCAAAGACAT+TGG | - | chr2_3:63125644-63125663 | None:intergenic | 25.0% |
| ! | TAATATAGTGAAAGAGGAAT+TGG | + | chr2_3:63125742-63125761 | Msa0305430:intron | 25.0% |
| ! | AATCTGATACCATATTATCA+AGG | + | chr2_3:63126092-63126111 | Msa0305430:intron | 25.0% |
| ! | ACTCTTATATATAGAGAGTT+TGG | + | chr2_3:63126171-63126190 | Msa0305430:intron | 25.0% |
| ! | AAGTTATAGTTCTTAAGAGT+TGG | + | chr2_3:63126314-63126333 | Msa0305430:three_prime_UTR | 25.0% |
| GGTATAGATAAAGTAAAAGG+AGG | - | chr2_3:63122183-63122202 | None:intergenic | 30.0% | |
| !!! | CCTATAGATTTTTTTGACAG+AGG | - | chr2_3:63122346-63122365 | None:intergenic | 30.0% |
| CCTCTGTCAAAAAAATCTAT+AGG | + | chr2_3:63122343-63122362 | Msa0305430:intron | 30.0% | |
| GAACAATGTCCTATTATTGT+TGG | - | chr2_3:63122407-63122426 | None:intergenic | 30.0% | |
| TACACATGGAAAGAATAAGA+GGG | + | chr2_3:63122451-63122470 | Msa0305430:CDS | 30.0% | |
| ACATAATGTCAGAGAGAAAA+AGG | + | chr2_3:63122501-63122520 | Msa0305430:CDS | 30.0% | |
| !!! | GTTTTTTGTAGATCAAAGCA+TGG | + | chr2_3:63122624-63122643 | Msa0305430:intron | 30.0% |
| GTATTTATTGAGGGTAAAGT+TGG | + | chr2_3:63122886-63122905 | Msa0305430:intron | 30.0% | |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr2_3:63122972-63122991 | Msa0305430:intron | 30.0% |
| ! | TAAGTTTGAGTTCTTATGCT+TGG | - | chr2_3:63123438-63123457 | None:intergenic | 30.0% |
| TTTGTTACTCACATTTACAG+AGG | - | chr2_3:63123504-63123523 | None:intergenic | 30.0% | |
| GTAAATGTGAGTAACAAAGA+AGG | + | chr2_3:63123506-63123525 | Msa0305430:intron | 30.0% | |
| ATTATGACATGTGACTTATG+AGG | + | chr2_3:63123886-63123905 | Msa0305430:intron | 30.0% | |
| TCATCCACGTAATGATAATT+TGG | + | chr2_3:63124140-63124159 | Msa0305430:CDS | 30.0% | |
| GAATCCAAATTATCATTACG+TGG | - | chr2_3:63124147-63124166 | None:intergenic | 30.0% | |
| !!! | TTGAGGGTATTTTTTCCAAA+TGG | - | chr2_3:63124330-63124349 | None:intergenic | 30.0% |
| AAACATTACCTTAGCAATGA+TGG | - | chr2_3:63124358-63124377 | None:intergenic | 30.0% | |
| ! | ATTGATGACAAAGTTGAAAC+AGG | + | chr2_3:63124488-63124507 | Msa0305430:CDS | 30.0% |
| ! | AATCTCCTTTTATCCAAGTT+GGG | - | chr2_3:63124810-63124829 | None:intergenic | 30.0% |
| ! | TAATCTCCTTTTATCCAAGT+TGG | - | chr2_3:63124811-63124830 | None:intergenic | 30.0% |
| CTTGGATAAAAGGAGATTAA+AGG | + | chr2_3:63124812-63124831 | Msa0305430:intron | 30.0% | |
| ! | TTGGTAATTCTCTTGTTTCA+TGG | - | chr2_3:63125163-63125182 | None:intergenic | 30.0% |
| ATGAAACAAGAGAATTACCA+AGG | + | chr2_3:63125162-63125181 | Msa0305430:intron | 30.0% | |
| AATTACCAAGGAAGAAACAA+TGG | + | chr2_3:63125174-63125193 | Msa0305430:intron | 30.0% | |
| GAAAGAATAAACCTTTACCA+GGG | + | chr2_3:63125279-63125298 | Msa0305430:intron | 30.0% | |
| CATTATGATGAGTTTGAGTA+GGG | + | chr2_3:63125336-63125355 | Msa0305430:intron | 30.0% | |
| ! | TAGAAGATTCAGGTTTACTT+GGG | - | chr2_3:63125535-63125554 | None:intergenic | 30.0% |
| ! | TTAGAAGATTCAGGTTTACT+TGG | - | chr2_3:63125536-63125555 | None:intergenic | 30.0% |
| !!! | GGCCAACTGAAATATTTTTT+GGG | - | chr2_3:63125623-63125642 | None:intergenic | 30.0% |
| !!! | TGGCCAACTGAAATATTTTT+TGG | - | chr2_3:63125624-63125643 | None:intergenic | 30.0% |
| !! | TTATGTTGATGATGTGATCT+TGG | - | chr2_3:63125717-63125736 | None:intergenic | 30.0% |
| AACCAGTAATATAGTGAAAG+AGG | + | chr2_3:63125736-63125755 | Msa0305430:intron | 30.0% | |
| TTCCTCTTTCACTATATTAC+TGG | - | chr2_3:63125741-63125760 | None:intergenic | 30.0% | |
| ATAATTGTGTGTGAAGGAGA+GGG | - | chr2_3:63122104-63122123 | None:intergenic | 35.0% | |
| AATAATTGTGTGTGAAGGAG+AGG | - | chr2_3:63122105-63122124 | None:intergenic | 35.0% | |
| GTATTTATCGGGTGATTCTA+TGG | - | chr2_3:63122154-63122173 | None:intergenic | 35.0% | |
| !! | AGGAGGGTATCTGTATTTAT+CGG | - | chr2_3:63122166-63122185 | None:intergenic | 35.0% |
| CTATACCTAACATGGAGAAT+TGG | + | chr2_3:63122196-63122215 | Msa0305430:exon | 35.0% | |
| ! | GGAGAATTGGTTCTCTAATA+TGG | + | chr2_3:63122221-63122240 | Msa0305430:CDS | 35.0% |
| !! | CAGAAGCATCCAACAATAAT+AGG | + | chr2_3:63122395-63122414 | Msa0305430:CDS | 35.0% |
| CTACACATGGAAAGAATAAG+AGG | + | chr2_3:63122450-63122469 | Msa0305430:CDS | 35.0% | |
| GAGAAAAAGGAGACAAGAAA+TGG | + | chr2_3:63122514-63122533 | Msa0305430:CDS | 35.0% | |
| AGAGAGATTCATAGCACTTT+CGG | + | chr2_3:63122538-63122557 | Msa0305430:CDS | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr2_3:63122730-63122749 | None:intergenic | 35.0% |
| TCGCTTTAGTCAATTGCATA+CGG | + | chr2_3:63122744-63122763 | Msa0305430:intron | 35.0% | |
| ! | AGTCAATTGCATACGGATTA+AGG | + | chr2_3:63122751-63122770 | Msa0305430:intron | 35.0% |
| TCAGTTCATGGCAAAAATTG+TGG | + | chr2_3:63123200-63123219 | Msa0305430:intron | 35.0% | |
| ATCAATTTCGAGATGAAGCA+AGG | + | chr2_3:63123328-63123347 | Msa0305430:intron | 35.0% | |
| TTAACACAGGTGATTTCACA+TGG | + | chr2_3:63123541-63123560 | Msa0305430:intron | 35.0% | |
| ATAGACAAGGTTTCTGTACT+TGG | + | chr2_3:63124000-63124019 | Msa0305430:CDS | 35.0% | |
| TAAAGAACGCATATCAATGC+TGG | + | chr2_3:63124050-63124069 | Msa0305430:CDS | 35.0% | |
| ATCAACTGTGAGAAACATGA+AGG | + | chr2_3:63124237-63124256 | Msa0305430:CDS | 35.0% | |
| GTTCAAACTATTGTCAATGC+TGG | + | chr2_3:63124266-63124285 | Msa0305430:CDS | 35.0% | |
| ! | AGCAATGATGGTAATGTTGA+GGG | - | chr2_3:63124346-63124365 | None:intergenic | 35.0% |
| ! | TAGCAATGATGGTAATGTTG+AGG | - | chr2_3:63124347-63124366 | None:intergenic | 35.0% |
| CAACATTACCATCATTGCTA+AGG | + | chr2_3:63124347-63124366 | Msa0305430:CDS | 35.0% | |
| ! | ATGGATTTTATGTGGCAGAT+GGG | + | chr2_3:63124438-63124457 | Msa0305430:intron | 35.0% |
| ! | AGTAATTGTTAGGGGCTTTT+TGG | - | chr2_3:63124698-63124717 | None:intergenic | 35.0% |
| AAAAGCCCCTAACAATTACT+TGG | + | chr2_3:63124698-63124717 | Msa0305430:intron | 35.0% | |
| AAAGCCCCTAACAATTACTT+GGG | + | chr2_3:63124699-63124718 | Msa0305430:intron | 35.0% | |
| TGCAACCCAAGTAATTGTTA+GGG | - | chr2_3:63124707-63124726 | None:intergenic | 35.0% | |
| TTGCAACCCAAGTAATTGTT+AGG | - | chr2_3:63124708-63124727 | None:intergenic | 35.0% | |
| ! | ATCTCCTTTTATCCAAGTTG+GGG | - | chr2_3:63124809-63124828 | None:intergenic | 35.0% |
| AAAAGGAGATTAAAGGGTTG+AGG | + | chr2_3:63124819-63124838 | Msa0305430:intron | 35.0% | |
| ! | TAGCTGATCTTTGGAAGAAA+TGG | + | chr2_3:63124869-63124888 | Msa0305430:intron | 35.0% |
| ! | AGCTGATCTTTGGAAGAAAT+GGG | + | chr2_3:63124870-63124889 | Msa0305430:intron | 35.0% |
| TGATTATCACAATAGAGCAC+AGG | + | chr2_3:63125005-63125024 | Msa0305430:intron | 35.0% | |
| AGTTCATCTCTTCAACTCAA+AGG | - | chr2_3:63125254-63125273 | None:intergenic | 35.0% | |
| AGTTGAAGAGATGAACTTCT+GGG | + | chr2_3:63125257-63125276 | Msa0305430:intron | 35.0% | |
| GGAAAGAATAAACCTTTACC+AGG | + | chr2_3:63125278-63125297 | Msa0305430:intron | 35.0% | |
| GCATTATGATGAGTTTGAGT+AGG | + | chr2_3:63125335-63125354 | Msa0305430:intron | 35.0% | |
| CTTCTATAAGCTGAAATGTC+AGG | + | chr2_3:63125443-63125462 | Msa0305430:intron | 35.0% | |
| CTTGATCTCTTAGAAGATTC+AGG | - | chr2_3:63125545-63125564 | None:intergenic | 35.0% | |
| ! | CTGAATCTTCTAAGAGATCA+AGG | + | chr2_3:63125543-63125562 | Msa0305430:intron | 35.0% |
| !!! | ACTGAAATATTTTTTGGGCC+TGG | - | chr2_3:63125618-63125637 | None:intergenic | 35.0% |
| GGCCCAAAAAATATTTCAGT+TGG | + | chr2_3:63125618-63125637 | Msa0305430:intron | 35.0% | |
| TAGTATGGAGAATTCGTATC+TGG | + | chr2_3:63125771-63125790 | Msa0305430:intron | 35.0% | |
| ! | CGTTCTTCTTCGTTTTCTTA+CGG | - | chr2_3:63125876-63125895 | None:intergenic | 35.0% |
| ! | AGTAATTGTTAGGGGCTTTT+TGG | - | chr2_3:63124698-63124717 | None:intergenic | 35.0% |
| AAAAGCCCCTAACAATTACT+TGG | + | chr2_3:63124698-63124717 | Msa0305430:intron | 35.0% | |
| AAAGCCCCTAACAATTACTT+GGG | + | chr2_3:63124699-63124718 | Msa0305430:intron | 35.0% | |
| TTCTTAAGAGTTGGAGTTGT+AGG | + | chr2_3:63126323-63126342 | Msa0305430:three_prime_UTR | 35.0% | |
| TCTTAAGAGTTGGAGTTGTA+GGG | + | chr2_3:63126324-63126343 | Msa0305430:three_prime_UTR | 35.0% | |
| !! | GGAGGGTATCTGTATTTATC+GGG | - | chr2_3:63122165-63122184 | None:intergenic | 40.0% |
| TACCTAACATGGAGAATTGG+TGG | + | chr2_3:63122199-63122218 | Msa0305430:exon | 40.0% | |
| ACCTAACATGGAGAATTGGT+GGG | + | chr2_3:63122200-63122219 | Msa0305430:exon | 40.0% | |
| TGTTGGATGCTTCTGATTGA+AGG | - | chr2_3:63122390-63122409 | None:intergenic | 40.0% | |
| CCATGTGTAGCAGCATTATT+AGG | - | chr2_3:63122440-63122459 | None:intergenic | 40.0% | |
| CCTAATAATGCTGCTACACA+TGG | + | chr2_3:63122437-63122456 | Msa0305430:CDS | 40.0% | |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr2_3:63122975-63122994 | Msa0305430:intron | 40.0% |
| !!! | ACGGAGGAGTACTATTTTAG+TGG | + | chr2_3:63122991-63123010 | Msa0305430:intron | 40.0% |
| GTTACTCACATTTACAGAGG+AGG | - | chr2_3:63123501-63123520 | None:intergenic | 40.0% | |
| TGGAGCAACAATGTTATGAG+AGG | + | chr2_3:63124070-63124089 | Msa0305430:CDS | 40.0% | |
| CTTCTCTGATTCTATGCCAA+TGG | - | chr2_3:63124199-63124218 | None:intergenic | 40.0% | |
| CATTGGCATAGAATCAGAGA+AGG | + | chr2_3:63124197-63124216 | Msa0305430:CDS | 40.0% | |
| ! | CATGGATTTTATGTGGCAGA+TGG | + | chr2_3:63124437-63124456 | Msa0305430:intron | 40.0% |
| GCAACCCAAGTAATTGTTAG+GGG | - | chr2_3:63124706-63124725 | None:intergenic | 40.0% | |
| TTTAATATCCCCCCACAAGT+TGG | + | chr2_3:63124762-63124781 | Msa0305430:intron | 40.0% | |
| TTTACCAACCTCCAACTTGT+GGG | - | chr2_3:63124776-63124795 | None:intergenic | 40.0% | |
| ATTTACCAACCTCCAACTTG+TGG | - | chr2_3:63124777-63124796 | None:intergenic | 40.0% | |
| GAAATCTGCTAGCTGATCTT+TGG | + | chr2_3:63124860-63124879 | Msa0305430:intron | 40.0% | |
| ! | GCAACTTTTCCTTGACTATG+TGG | + | chr2_3:63124916-63124935 | Msa0305430:intron | 40.0% |
| GATTGATTGCCACATAGTCA+AGG | - | chr2_3:63124928-63124947 | None:intergenic | 40.0% | |
| GCAATCAATCTCCAGATGTT+TGG | + | chr2_3:63124938-63124957 | Msa0305430:intron | 40.0% | |
| TTATCACAATAGAGCACAGG+TGG | + | chr2_3:63125008-63125027 | Msa0305430:intron | 40.0% | |
| TACCTATCTGCTCAGAGATT+TGG | - | chr2_3:63125051-63125070 | None:intergenic | 40.0% | |
| AGAAACAACTCACTGTTTCC+AGG | - | chr2_3:63125133-63125152 | None:intergenic | 40.0% | |
| !! | GGAAACAGTGAGTTGTTTCT+TGG | + | chr2_3:63125133-63125152 | Msa0305430:intron | 40.0% |
| GAAGAAACAATGGCCAGATA+TGG | + | chr2_3:63125184-63125203 | Msa0305430:intron | 40.0% | |
| GAGTTGAAGAGATGAACTTC+TGG | + | chr2_3:63125256-63125275 | Msa0305430:intron | 40.0% | |
| GAGTTTGAGTAGGGTTACTA+AGG | + | chr2_3:63125345-63125364 | Msa0305430:intron | 40.0% | |
| GAGTAGGGTTACTAAGGAAT+TGG | + | chr2_3:63125351-63125370 | Msa0305430:intron | 40.0% | |
| GCTGAAATGTCAGGAAATGA+AGG | + | chr2_3:63125452-63125471 | Msa0305430:intron | 40.0% | |
| AGCTTAATAGAAGGGTCAGA+AGG | + | chr2_3:63125491-63125510 | Msa0305430:intron | 40.0% | |
| !!! | GAAATATTTTTTGGGCCTGG+AGG | - | chr2_3:63125615-63125634 | None:intergenic | 40.0% |
| AGGAATTGGTGCACATAGTA+TGG | + | chr2_3:63125756-63125775 | Msa0305430:intron | 40.0% | |
| !! | GTATCTGGTTGATGAGCAAT+TGG | + | chr2_3:63125786-63125805 | Msa0305430:intron | 40.0% |
| AGCTTGAGTTTGAGCATCAA+TGG | + | chr2_3:63126017-63126036 | Msa0305430:intron | 40.0% | |
| TTGAGTTTGAGCATCAATGG+CGG | + | chr2_3:63126020-63126039 | Msa0305430:intron | 40.0% | |
| TTACTCTCTCTCTTCTTGAG+AGG | - | chr2_3:63126073-63126092 | None:intergenic | 40.0% | |
| TGCAGCCCAAGTAATTGTTA+GGG | - | chr2_3:63126246-63126265 | None:intergenic | 40.0% | |
| TTGCAGCCCAAGTAATTGTT+AGG | - | chr2_3:63126247-63126266 | None:intergenic | 40.0% | |
| GGGTATGAATGTGAACAGAA+AGG | + | chr2_3:63126344-63126363 | Msa0305430:three_prime_UTR | 40.0% | |
| TCCCACCAATTCTCCATGTT+AGG | - | chr2_3:63122204-63122223 | None:intergenic | 45.0% | |
| TGGAGAATTGGTGGGAGAAT+TGG | + | chr2_3:63122208-63122227 | Msa0305430:CDS | 45.0% | |
| ATAAGAGGGTGAGAAGCTCA+TGG | + | chr2_3:63122465-63122484 | Msa0305430:CDS | 45.0% | |
| TAAGAGGGTGAGAAGCTCAT+GGG | + | chr2_3:63122466-63122485 | Msa0305430:CDS | 45.0% | |
| AGAAGCTCATGGGAGATACA+AGG | + | chr2_3:63122476-63122495 | Msa0305430:CDS | 45.0% | |
| ! | TATGATACCCGGCTTGAAGA+AGG | + | chr2_3:63122562-63122581 | Msa0305430:CDS | 45.0% |
| TTCTTATGCTTGGAGCTTGG+TGG | - | chr2_3:63123428-63123447 | None:intergenic | 45.0% | |
| GAGTTCTTATGCTTGGAGCT+TGG | - | chr2_3:63123431-63123450 | None:intergenic | 45.0% | |
| CACTACTGGTGGAAACATAG+AGG | - | chr2_3:63124302-63124321 | None:intergenic | 45.0% | |
| ! | AAATGGAAGCACACTACTGG+TGG | - | chr2_3:63124313-63124332 | None:intergenic | 45.0% |
| ACCAGTAGTGTGCTTCCATT+TGG | + | chr2_3:63124312-63124331 | Msa0305430:CDS | 45.0% | |
| ! | TCCAAATGGAAGCACACTAC+TGG | - | chr2_3:63124316-63124335 | None:intergenic | 45.0% |
| ! | TTTTATGTGGCAGATGGGTG+AGG | + | chr2_3:63124443-63124462 | Msa0305430:intron | 45.0% |
| TTACCAACCTCCAACTTGTG+GGG | - | chr2_3:63124775-63124794 | None:intergenic | 45.0% | |
| AATGTTGAGCAACCCCAACT+TGG | + | chr2_3:63124794-63124813 | Msa0305430:intron | 45.0% | |
| GCAACCCCAACTTGGATAAA+AGG | + | chr2_3:63124802-63124821 | Msa0305430:intron | 45.0% | |
| GTCAAGGAAAAGTTGCAAGC+TGG | - | chr2_3:63124912-63124931 | None:intergenic | 45.0% | |
| CTATCTGCTCAGAGATTTGG+AGG | - | chr2_3:63125048-63125067 | None:intergenic | 45.0% | |
| CTCCAAATCTCTGAGCAGAT+AGG | + | chr2_3:63125046-63125065 | Msa0305430:intron | 45.0% | |
| ! | TTCAGCTTCTGAAGATGACC+TGG | + | chr2_3:63125112-63125131 | Msa0305430:intron | 45.0% |
| ! | TCTGGCCATTGTTTCTTCCT+TGG | - | chr2_3:63125182-63125201 | None:intergenic | 45.0% |
| GACACTAGAAGGTCCATATC+TGG | - | chr2_3:63125200-63125219 | None:intergenic | 45.0% | |
| ! | AGGATACACTGATGCTGACT+GGG | - | chr2_3:63125234-63125253 | None:intergenic | 45.0% |
| AAGGATACACTGATGCTGAC+TGG | - | chr2_3:63125235-63125254 | None:intergenic | 45.0% | |
| CTTAAAGGATGCCCTGGTAA+AGG | - | chr2_3:63125293-63125312 | None:intergenic | 45.0% | |
| ! | CTTTACCAGGGCATCCTTTA+AGG | + | chr2_3:63125291-63125310 | Msa0305430:intron | 45.0% |
| AGATACCTTAAAGGATGCCC+TGG | - | chr2_3:63125299-63125318 | None:intergenic | 45.0% | |
| AATAGAAGGGTCAGAAGGAG+TGG | + | chr2_3:63125496-63125515 | Msa0305430:intron | 45.0% | |
| GAGGTTGCACATTCAAACTC+TGG | - | chr2_3:63125596-63125615 | None:intergenic | 45.0% | |
| AGTTTGAATGTGCAACCTCC+AGG | + | chr2_3:63125597-63125616 | Msa0305430:intron | 45.0% | |
| !! | GTTGATGATGTGATCTTGGC+TGG | - | chr2_3:63125713-63125732 | None:intergenic | 45.0% |
| GCAGCCCAAGTAATTGTTAG+GGG | - | chr2_3:63126245-63126264 | None:intergenic | 45.0% | |
| !!! | ATGAAATTATTTTTATAAAA+TGG | - | chr2_3:63122262-63122281 | None:intergenic | 5.0% |
| !!! | ATTATATTAACTTTTTATAA+TGG | + | chr2_3:63122678-63122697 | Msa0305430:intron | 5.0% |
| GCACTTTCGGCTATGATACC+CGG | + | chr2_3:63122551-63122570 | Msa0305430:CDS | 50.0% | |
| GAACTGACCTTCTTCAAGCC+GGG | - | chr2_3:63122572-63122591 | None:intergenic | 50.0% | |
| GGAACTGACCTTCTTCAAGC+CGG | - | chr2_3:63122573-63122592 | None:intergenic | 50.0% | |
| ! | TTCAGGGAGGAGCACATGAT+TGG | - | chr2_3:63124169-63124188 | None:intergenic | 50.0% |
| TGCCAATGGCCTCTACTTCA+GGG | - | chr2_3:63124185-63124204 | None:intergenic | 50.0% | |
| ATGCCAATGGCCTCTACTTC+AGG | - | chr2_3:63124186-63124205 | None:intergenic | 50.0% | |
| ! | AATATCCCCCCACAAGTTGG+AGG | + | chr2_3:63124765-63124784 | Msa0305430:intron | 50.0% |
| TACCAACCTCCAACTTGTGG+GGG | - | chr2_3:63124774-63124793 | None:intergenic | 50.0% | |
| CCATGAACGCACCAAACATC+TGG | - | chr2_3:63124952-63124971 | None:intergenic | 50.0% | |
| !! | CCAGATGTTTGGTGCGTTCA+TGG | + | chr2_3:63124949-63124968 | Msa0305430:intron | 50.0% |
| TTGGTGCGTTCATGGAAGAC+AGG | + | chr2_3:63124957-63124976 | Msa0305430:intron | 50.0% | |
| GCGTTCATGGAAGACAGGAT+TGG | + | chr2_3:63124962-63124981 | Msa0305430:intron | 50.0% | |
| CTGCTTCATGTGAACTGCAG+TGG | - | chr2_3:63125076-63125095 | None:intergenic | 50.0% | |
| ! | TGAGCAATTGGTGCTTGACG+AGG | + | chr2_3:63125798-63125817 | Msa0305430:intron | 50.0% |
| AAGGAGAGGGATCGTGAAGC+TGG | - | chr2_3:63122091-63122110 | None:intergenic | 55.0% | |
| TGTGCTCCTCCCTGAAGTAG+AGG | + | chr2_3:63124173-63124192 | Msa0305430:CDS | 55.0% | |
| CAATGGCCTCTACTTCAGGG+AGG | - | chr2_3:63124182-63124201 | None:intergenic | 55.0% | |
| CTCCCTGAAGTAGAGGCCAT+TGG | + | chr2_3:63124180-63124199 | Msa0305430:CDS | 55.0% | |
| GGCAGATGGGTGAGGAATAC+AGG | + | chr2_3:63124451-63124470 | Msa0305430:intron | 55.0% | |
| ACCAACCTCCAACTTGTGGG+GGG | - | chr2_3:63124773-63124792 | None:intergenic | 55.0% | |
| CTGGCTGCAGAGACACTAGA+AGG | - | chr2_3:63125211-63125230 | None:intergenic | 55.0% | |
| ! | TACACTGATGCTGACTGGGC+TGG | - | chr2_3:63125230-63125249 | None:intergenic | 55.0% |
| GGGTCAGAAGGAGTGGAAAG+TGG | + | chr2_3:63125503-63125522 | Msa0305430:intron | 55.0% | |
| ! | GCAATTGGTGCTTGACGAGG+AGG | + | chr2_3:63125801-63125820 | Msa0305430:intron | 55.0% |
| ! | TCCCCCCACAAGTTGGAGGT+TGG | + | chr2_3:63124769-63124788 | Msa0305430:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 63122088 | 63126378 | 63122088 | ID=Msa0305430;Name=Msa0305430 |
| chr2_3 | mRNA | 63122088 | 63126378 | 63122088 | ID=Msa0305430-mRNA-1;Parent=Msa0305430;Name=Msa0305430-mRNA-1;_AED=0.21;_eAED=0.21;_QI=119|1|1|1|0.75|0.6|5|92|234 |
| chr2_3 | exon | 63122088 | 63122242 | 63122088 | ID=Msa0305430-mRNA-1:exon:21098;Parent=Msa0305430-mRNA-1 |
| chr2_3 | exon | 63122365 | 63122583 | 63122365 | ID=Msa0305430-mRNA-1:exon:21099;Parent=Msa0305430-mRNA-1 |
| chr2_3 | exon | 63124000 | 63124368 | 63124000 | ID=Msa0305430-mRNA-1:exon:21100;Parent=Msa0305430-mRNA-1 |
| chr2_3 | exon | 63124456 | 63124556 | 63124456 | ID=Msa0305430-mRNA-1:exon:21101;Parent=Msa0305430-mRNA-1 |
| chr2_3 | exon | 63126307 | 63126378 | 63126307 | ID=Msa0305430-mRNA-1:exon:21102;Parent=Msa0305430-mRNA-1 |
| chr2_3 | five_prime_UTR | 63122088 | 63122206 | 63122088 | ID=Msa0305430-mRNA-1:five_prime_utr;Parent=Msa0305430-mRNA-1 |
| chr2_3 | CDS | 63122207 | 63122242 | 63122207 | ID=Msa0305430-mRNA-1:cds;Parent=Msa0305430-mRNA-1 |
| chr2_3 | CDS | 63122365 | 63122583 | 63122365 | ID=Msa0305430-mRNA-1:cds;Parent=Msa0305430-mRNA-1 |
| chr2_3 | CDS | 63124000 | 63124368 | 63124000 | ID=Msa0305430-mRNA-1:cds;Parent=Msa0305430-mRNA-1 |
| chr2_3 | CDS | 63124456 | 63124536 | 63124456 | ID=Msa0305430-mRNA-1:cds;Parent=Msa0305430-mRNA-1 |
| chr2_3 | three_prime_UTR | 63124537 | 63124556 | 63124537 | ID=Msa0305430-mRNA-1:three_prime_utr;Parent=Msa0305430-mRNA-1 |
| chr2_3 | three_prime_UTR | 63126307 | 63126378 | 63126307 | ID=Msa0305430-mRNA-1:three_prime_utr;Parent=Msa0305430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
