AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0344070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344070 MtrunA17_Chr2g0295801 95.625 640 22 3 1 638 1 636 0.0 1237
Msa0344070 MtrunA17_Chr2g0295801 95.768 449 18 1 619 1066 696 1144 0.0 899
Msa0344070 MtrunA17_Chr8g0390311 26.770 452 298 10 638 1071 899 1335 9.60e-43 170
Msa0344070 MtrunA17_Chr1g0196911 26.478 423 290 11 656 1067 1065 1477 7.93e-38 154
Msa0344070 MtrunA17_Chr1g0196911 33.133 166 104 2 2 160 1 166 5.58e-17 87.0
Msa0344070 MtrunA17_Chr1g0196911 23.828 256 187 3 373 627 698 946 9.22e-15 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344070 AT3G06880.2 56.713 432 186 1 636 1066 828 1259 1.83e-161 513
Msa0344070 AT3G06880.2 51.852 297 139 2 343 637 453 747 3.10e-82 293
Msa0344070 AT3G06880.2 47.475 198 86 6 10 203 23 206 1.98e-40 163
Msa0344070 AT3G06880.1 56.613 431 186 1 636 1065 828 1258 4.76e-161 512
Msa0344070 AT3G06880.1 51.852 297 139 2 343 637 453 747 2.68e-82 294
Msa0344070 AT3G06880.1 47.475 198 86 6 10 203 23 206 1.91e-40 163
Msa0344070 AT3G06880.4 52.128 470 186 2 636 1066 828 1297 5.22e-154 494
Msa0344070 AT3G06880.4 51.852 297 139 2 343 637 453 747 4.80e-82 293
Msa0344070 AT3G06880.4 47.475 198 86 6 10 203 23 206 2.42e-40 163
Msa0344070 AT3G06880.3 55.330 394 175 1 636 1028 828 1221 3.25e-140 455
Msa0344070 AT3G06880.3 51.852 297 139 2 343 637 453 747 2.98e-82 293
Msa0344070 AT3G06880.3 47.475 198 86 6 10 203 23 206 2.37e-40 163
Msa0344070 AT3G06880.5 55.471 393 174 1 636 1027 828 1220 7.69e-140 454
Msa0344070 AT3G06880.5 51.852 297 139 2 343 637 453 747 2.96e-82 293
Msa0344070 AT3G06880.5 47.475 198 86 6 10 203 23 206 2.30e-40 163

Find 183 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAGTAAGGATTGAAATTT+TGG 0.093262 3_1:+2649606 None:intergenic
TTGAAAAGGTATGGGATATT+AGG 0.122615 3_1:-2650777 Msa0344070:intron
ATCCAGCCCTGTTGAAAATT+TGG 0.157299 3_1:+2649163 None:intergenic
TATTATCAGGTCATGCTTTA+TGG 0.194808 3_1:-2655666 Msa0344070:CDS
GACTGAGAAGCAAGATTAAA+AGG 0.198697 3_1:-2652118 Msa0344070:CDS
TTCATTAAAGGATGTGATTT+TGG 0.214261 3_1:-2654475 Msa0344070:CDS
GTCCTATCCAATCTTTATTA+TGG 0.234183 3_1:-2656089 Msa0344070:CDS
TATAGAAGATGTGAAGAAAA+AGG 0.248826 3_1:-2654355 Msa0344070:CDS
CAGAGAATTCAAAGAATTCT+TGG 0.259484 3_1:+2656120 None:intergenic
CAAGACATTCAAGATTTCTT+TGG 0.273832 3_1:+2650516 None:intergenic
TGAAAAGGTATGGGATATTA+GGG 0.277644 3_1:-2650776 Msa0344070:intron
AACTAATTATGGTTCATTAA+AGG 0.283072 3_1:-2654487 Msa0344070:CDS
AGTTCATCAGGAACTAATTA+TGG 0.287185 3_1:-2654498 Msa0344070:CDS
GGAATTGGATGAAAGACTTT+TGG 0.312737 3_1:-2651967 Msa0344070:CDS
CTAATCTTTGTTGTAATACT+AGG 0.322044 3_1:+2649063 None:intergenic
CAACAAACCAAGTAATGATT+TGG 0.324417 3_1:+2655939 None:intergenic
CATACAATCTCTACTAATAT+TGG 0.326616 3_1:+2654219 None:intergenic
CTCATCAGCAAGCAGCATTC+AGG 0.331709 3_1:-2649524 Msa0344070:intron
TGCTTCCTCCAACTTCTTGT+AGG 0.336549 3_1:+2649803 None:intergenic
AATATAACACAACACACAAT+AGG 0.339573 3_1:-2649844 Msa0344070:CDS
TCCAGCCCTGTTGAAAATTT+GGG 0.345208 3_1:+2649164 None:intergenic
TCATCTTCATCAAGCATTGC+TGG 0.354572 3_1:+2655978 None:intergenic
TAGTCTTGTATGGGACATTA+AGG 0.356566 3_1:-2650743 Msa0344070:CDS
AAACTCGAGCGCCGTGCATT+TGG 0.362157 3_1:+2653870 None:intergenic
TCCAACACTTATGATACATT+TGG 0.362304 3_1:+2652169 None:intergenic
TAGGCTACAATTGAATTGAT+TGG 0.365098 3_1:+2649773 None:intergenic
TCAGTCCTCTCTCTAAAGTA+TGG 0.365570 3_1:+2652135 None:intergenic
TGGTTTCTCCGAAGCTTGTT+TGG 0.374157 3_1:-2655836 Msa0344070:CDS
CATTATCTCCTTTGTCAGTA+AGG 0.375083 3_1:+2649593 None:intergenic
GAAGCATGAAAATAGAAGTT+TGG 0.375640 3_1:-2655775 Msa0344070:CDS
AGGTTAAAAGATCTTTGTTC+CGG 0.382867 3_1:+2656029 None:intergenic
TCTGCATCCTGGAGTGGAAT+TGG 0.385128 3_1:-2651982 Msa0344070:CDS
GATCATGGAAAGTTATATAT+TGG 0.387665 3_1:-2649970 Msa0344070:CDS
TACTACAAGGGACTGTTGTT+TGG 0.388217 3_1:-2651032 Msa0344070:CDS
TCCAGTGTATTTATATCTAT+AGG 0.389457 3_1:+2654249 None:intergenic
ACAACAAAGATTAGCCAGTA+TGG 0.396432 3_1:-2649054 Msa0344070:CDS
TGCTACAAATAACATGCATT+TGG 0.399616 3_1:-2654085 Msa0344070:CDS
GGCACTCAGCTAGTCTTGTA+TGG 0.401402 3_1:-2650753 Msa0344070:CDS
CAAGCCATGAGATGGCTATA+AGG 0.401694 3_1:+2652081 None:intergenic
TTCTAACAACAATAATTTCA+AGG 0.406782 3_1:-2654389 Msa0344070:CDS
GGAGTGTTTGGTGTATTATC+AGG 0.408403 3_1:-2655679 Msa0344070:CDS
ATATTCAGATGGATCAATTA+AGG 0.410367 3_1:-2651006 Msa0344070:intron
GCATCTGAGATTATATTAAG+AGG 0.412127 3_1:-2652017 Msa0344070:CDS
TGATAGACCTCAAATACATA+TGG 0.412630 3_1:-2656244 Msa0344070:CDS
GAGAGTTTAATCAGTTCATC+AGG 0.417394 3_1:-2654510 Msa0344070:CDS
ACTATAGAGCCAATCTCTAT+AGG 0.419557 3_1:+2649754 None:intergenic
TTCAATTCCAAATCATTACT+TGG 0.421927 3_1:-2655946 Msa0344070:CDS
CAATTGTAGCCTATAGAGAT+TGG 0.424376 3_1:-2649763 Msa0344070:CDS
CAAGATGCATATCAAACTTA+AGG 0.426397 3_1:-2656151 Msa0344070:CDS
GCAGAATTACTGAGGCTGTC+TGG 0.430531 3_1:+2652038 None:intergenic
GTCAATGCCATAATAAAGAT+TGG 0.433375 3_1:+2656082 None:intergenic
GTCTCTAGAAGGTGTAGAAA+TGG 0.435234 3_1:+2653907 None:intergenic
TGCATGTATAATTATGCCTC+AGG 0.435364 3_1:-2651936 Msa0344070:CDS
GGGTGCTAGTTTCAATCAAC+AGG 0.436268 3_1:-2656223 Msa0344070:CDS
ATAGGTTAGCAGCTAAAATC+TGG 0.438837 3_1:+2653590 None:intergenic
AATGACTAAGCTTTCCATAC+TGG 0.440278 3_1:+2649040 None:intergenic
CTAGCACCCATATGTATTTG+AGG 0.440296 3_1:+2656237 None:intergenic
AGAAGTTACACAGCTGGTAT+TGG 0.441950 3_1:+2655045 None:intergenic
TGAGTACTTACTGATGTGTT+TGG 0.444426 3_1:+2651298 None:intergenic
GCAGCTAAAATCTGGTGATC+AGG 0.446213 3_1:+2653598 None:intergenic
GGTGATCAGGTTGTAATTGA+TGG 0.448426 3_1:+2653611 None:intergenic
CTCAACTTCGAAAGAGGAAA+AGG 0.453305 3_1:-2654433 Msa0344070:CDS
AATTCATTCCAAACAAGCTT+CGG 0.453656 3_1:+2655828 None:intergenic
ATGTGTCTAACTGAATCAAT+AGG 0.453825 3_1:+2653572 None:intergenic
AATCAATGAAGCAATTGTTA+AGG 0.454034 3_1:-2655721 Msa0344070:CDS
ACAGTCCCTTGTAGTATATG+AGG 0.456708 3_1:+2651039 None:intergenic
AAGGAGGTACAAGGAGTGTT+TGG 0.460275 3_1:-2655691 Msa0344070:CDS
GTGGAAGATAAATGTTGTCT+AGG 0.466499 3_1:+2656370 None:intergenic
TGATGAGAGAGATGCTGAGA+AGG 0.469174 3_1:+2656292 None:intergenic
CACAACACACAATAGGGAAC+TGG 0.469494 3_1:-2649837 Msa0344070:CDS
ATCACATCTTGAGGATCCAT+TGG 0.473144 3_1:+2654840 None:intergenic
ATATAACACAACACACAATA+GGG 0.475647 3_1:-2649843 Msa0344070:CDS
CTTTCATCCAATTCCACTCC+AGG 0.475827 3_1:+2651975 None:intergenic
TGCAATACAATCAAAACATC+CGG 0.481812 3_1:-2656048 Msa0344070:CDS
GATCCACTGATAAAACCATA+AGG 0.482328 3_1:-2650660 Msa0344070:CDS
TTTCCATTTGTTCAGATCAT+CGG 0.482821 3_1:-2653704 Msa0344070:intron
AGTGCAAGTAAGCATGTTGA+AGG 0.486423 3_1:-2649734 Msa0344070:CDS
ATTGAGCAATTTCTGCATCC+TGG 0.487251 3_1:-2651993 Msa0344070:CDS
AGGTGTAGAAATGGAGCAAG+AGG 0.492964 3_1:+2653916 None:intergenic
TAACAAGAGGTCAGATGAGT+TGG 0.495104 3_1:+2649227 None:intergenic
CTTATAGCCATCTCATGGCT+TGG 0.498737 3_1:-2652080 Msa0344070:CDS
AAAGATTGGATAGGACTGAT+TGG 0.500339 3_1:+2656096 None:intergenic
ATGTAACTCCTCAGCCATCC+AGG 0.503266 3_1:+2651342 None:intergenic
TCAAACCACCTACAAGAAGT+TGG 0.503470 3_1:-2649811 Msa0344070:CDS
AAGTGCATGGCAGTGGATCA+TGG 0.505739 3_1:-2649985 Msa0344070:CDS
TCCAAATGTATCATAAGTGT+TGG 0.505995 3_1:-2652170 Msa0344070:CDS
TTCCTCCAACTTCTTGTAGG+TGG 0.506735 3_1:+2649806 None:intergenic
ACTGAGAAGCAAGATTAAAA+GGG 0.507825 3_1:-2652117 Msa0344070:CDS
TCAGTTGTTAGGAAGCTTCA+AGG 0.508700 3_1:-2655900 Msa0344070:CDS
TTGCTTTATCGATTTCAAAA+CGG 0.512285 3_1:-2654743 Msa0344070:CDS
GCATGGGAAGTGCATGGCAG+TGG 0.512378 3_1:-2649992 Msa0344070:CDS
TCTTTGTTGTAATACTAGGC+TGG 0.514010 3_1:+2649067 None:intergenic
TCATCTTCGAACTTTCTTCG+CGG 0.514629 3_1:+2654595 None:intergenic
TGTAATACTAGGCTGGCAAA+AGG 0.515096 3_1:+2649074 None:intergenic
GCAATTCTCGGAAGGAGTAA+AGG 0.515138 3_1:-2651392 Msa0344070:CDS
AGTGATCTCAACTTCGAAAG+AGG 0.517243 3_1:-2654439 Msa0344070:CDS
TGTGCGCGCAAATGATGAAC+TGG 0.522834 3_1:+2650473 None:intergenic
TGCTTGCATGATCAAAGAGA+TGG 0.523620 3_1:+2654643 None:intergenic
TACTGAGAAGGGACTAATCA+AGG 0.523834 3_1:-2649259 Msa0344070:CDS
CTGCACAGACTCAAGCATAC+AGG 0.525550 3_1:-2649947 Msa0344070:intron
TGCTTTATGGAGAGATTCCA+TGG 0.525779 3_1:-2655653 Msa0344070:CDS
GGAGATTATCAGCAGGGAGC+AGG 0.526014 3_1:-2649323 Msa0344070:CDS
TGGTCAATCTGCTTGAATCA+AGG 0.526245 3_1:+2654784 None:intergenic
TATAATTATGCCTCAGGGAA+AGG 0.526256 3_1:-2651930 Msa0344070:intron
AGGAGATAATGTGGTAGCCA+TGG 0.528745 3_1:-2649581 Msa0344070:CDS
TACAAGGGACTGTTGTTTGG+TGG 0.529437 3_1:-2651029 Msa0344070:CDS
TCCTATAGATATAAATACAC+TGG 0.530362 3_1:-2654250 Msa0344070:CDS
GACGACTTTCAAACATAACC+TGG 0.531106 3_1:-2651360 Msa0344070:CDS
GGAAGCTTCAAGGTGATGAA+TGG 0.531953 3_1:-2655890 Msa0344070:CDS
AAAAGACTTTCACAAAGTTG+AGG 0.535670 3_1:+2655801 None:intergenic
TCTTGAAGTAATAGTCATGA+AGG 0.536252 3_1:-2650498 Msa0344070:CDS
CATTTCTAGTAACCAACAAA+AGG 0.539460 3_1:-2656326 Msa0344070:five_prime_UTR
GTATTTATATCTATAGGAGA+TGG 0.541395 3_1:+2654255 None:intergenic
TCCTCTCTCTAAAGTATGGA+AGG 0.544977 3_1:+2652139 None:intergenic
GATAGACCTCAAATACATAT+GGG 0.547038 3_1:-2656243 Msa0344070:CDS
TTGCTGATGAGCTAGAGATT+AGG 0.547967 3_1:+2649536 None:intergenic
ATTGATTCAGTTAGACACAT+TGG 0.549208 3_1:-2653569 Msa0344070:intron
TTGTTTGGTGGATATTCAGA+TGG 0.549664 3_1:-2651017 Msa0344070:CDS
AGGATACAAGCATAGATGTA+TGG 0.550730 3_1:-2652205 Msa0344070:CDS
TGTTCTTGCATCACATCTTG+AGG 0.552144 3_1:+2654831 None:intergenic
TAATGTGGTAGCCATGGAAG+TGG 0.552834 3_1:-2649575 Msa0344070:CDS
GTTCATCATTTGCGCGCACA+TGG 0.554118 3_1:-2650470 Msa0344070:CDS
TCACATCTTGAGGATCCATT+GGG 0.555382 3_1:+2654841 None:intergenic
GGATGGCTGAGGAGTTACAT+AGG 0.556151 3_1:-2651339 Msa0344070:CDS
TGAAGCAATTGTTAAGGAGA+AGG 0.556575 3_1:-2655715 Msa0344070:CDS
TTAGAGAAATAAATAACAAG+AGG 0.557349 3_1:+2649214 None:intergenic
ATTGAAGTTCTTCTTACAGA+GGG 0.557990 3_1:+2649140 None:intergenic
ATTTCAATCCTTACTGACAA+AGG 0.559066 3_1:-2649601 Msa0344070:CDS
GGAGAAGGCAAGGAGGTACA+AGG 0.559331 3_1:-2655700 Msa0344070:CDS
TGTTGAAGGAACAACATTCA+AGG 0.565707 3_1:-2649720 Msa0344070:intron
TGATTTAAATTGCCGTGTCG+AGG 0.566562 3_1:-2654703 Msa0344070:CDS
TTGCTCCCTCATATACTACA+AGG 0.567949 3_1:-2651045 Msa0344070:CDS
GTATGGGAAGGTTCACCCAA+TGG 0.567986 3_1:-2654856 Msa0344070:CDS
AAACATAACCTGGATGGCTG+AGG 0.575096 3_1:-2651350 Msa0344070:CDS
CTCAAACAGATCTGGTTGAG+AGG 0.577396 3_1:-2649363 Msa0344070:intron
AAGTTGGGGAGATTATCAGC+AGG 0.579209 3_1:-2649330 Msa0344070:CDS
GAAAAGGTATGGGATATTAG+GGG 0.580142 3_1:-2650775 Msa0344070:intron
GAAGTCTTCTACCACTTCCA+TGG 0.580259 3_1:+2649564 None:intergenic
ATCCACTGATAAAACCATAA+GGG 0.580275 3_1:-2650659 Msa0344070:intron
GCAATTTCTGCATCCTGGAG+TGG 0.582232 3_1:-2651988 Msa0344070:CDS
AAATGTTCGTGCCAAATGCA+CGG 0.583854 3_1:-2653881 Msa0344070:CDS
CATACACAAATCCTTGAGGC+AGG 0.584365 3_1:-2651089 Msa0344070:CDS
GCACTCAGCTAGTCTTGTAT+GGG 0.584901 3_1:-2650752 Msa0344070:CDS
TGTTAGTTCTTTGAATTCTG+AGG 0.586035 3_1:-2655748 Msa0344070:CDS
TGAAGTAGAAGTTACACAGC+TGG 0.590547 3_1:+2655039 None:intergenic
TTGACATCCAAGCCATGAGA+TGG 0.591635 3_1:+2652073 None:intergenic
ATAAGTCCACTGAGAACATG+AGG 0.594722 3_1:+2654048 None:intergenic
ACCTTCCATACTTTAGAGAG+AGG 0.595452 3_1:-2652140 Msa0344070:CDS
ATTTCTACACCTTCTAGAGA+CGG 0.598447 3_1:-2653905 Msa0344070:CDS
AAACTAATGCAATTCTCGGA+AGG 0.598492 3_1:-2651400 Msa0344070:CDS
TGCCATAATAAAGATTGGAT+AGG 0.603150 3_1:+2656087 None:intergenic
CAGTCCCTTGTAGTATATGA+GGG 0.606307 3_1:+2651040 None:intergenic
TTACATACCTTGGTATGCAT+AGG 0.608413 3_1:+2653836 None:intergenic
GATGGCTGAGGAGTTACATA+GGG 0.610113 3_1:-2651338 Msa0344070:CDS
CGGCTATTAATCTGCTGCAG+AGG 0.610136 3_1:-2653684 Msa0344070:CDS
TAAAGTTGCGACCTGCCTCA+AGG 0.612599 3_1:+2651078 None:intergenic
CAATTGTTAAGGAGAAGGCA+AGG 0.616510 3_1:-2655710 Msa0344070:CDS
GCAAGCAGAAATCATAGACT+CGG 0.620764 3_1:-2654627 Msa0344070:CDS
TACTGACAAAGGAGATAATG+TGG 0.621257 3_1:-2649590 Msa0344070:CDS
TTGATTCAAGCAGATTGACC+AGG 0.623847 3_1:-2654782 Msa0344070:CDS
CTGCAATAACTGCTCCACCA+TGG 0.624772 3_1:+2655636 None:intergenic
ACTTTCAAACATAACCTGGA+TGG 0.625914 3_1:-2651356 Msa0344070:CDS
ACTGCCTTATAGCCATCTCA+TGG 0.627304 3_1:-2652085 Msa0344070:CDS
AATTGAAGTTCTTCTTACAG+AGG 0.627594 3_1:+2649139 None:intergenic
AGGTAAGCATGGGAAGTGCA+TGG 0.635419 3_1:-2649998 Msa0344070:CDS
AACCACCTACAAGAAGTTGG+AGG 0.641047 3_1:-2649808 Msa0344070:CDS
AAAAGGTATGGGATATTAGG+GGG 0.643697 3_1:-2650774 Msa0344070:intron
TCAAAGAGATGGAATTCTAG+TGG 0.647117 3_1:+2654654 None:intergenic
GCATGTATAATTATGCCTCA+GGG 0.650931 3_1:-2651935 Msa0344070:CDS
TAAGTCCACTGAGAACATGA+GGG 0.652014 3_1:+2654049 None:intergenic
AGGAAATCCTATGCATACCA+AGG 0.652752 3_1:-2653843 Msa0344070:intron
AGTTCCCCTCATGTTCTCAG+TGG 0.653381 3_1:-2654054 Msa0344070:CDS
TGTTCATACACAAATCCTTG+AGG 0.673649 3_1:-2651093 Msa0344070:CDS
TGCTCCCTCATATACTACAA+GGG 0.675914 3_1:-2651044 Msa0344070:CDS
AGTTGGGGAGATTATCAGCA+GGG 0.676228 3_1:-2649329 Msa0344070:CDS
TCTCAGATGCAGAATTACTG+AGG 0.682745 3_1:+2652030 None:intergenic
CGATTAATAAATCCTCGACA+CGG 0.692393 3_1:+2654691 None:intergenic
ATCATCAATGATGCTGCATG+AGG 0.714753 3_1:+2654138 None:intergenic
AAGTCCACTGAGAACATGAG+GGG 0.718661 3_1:+2654050 None:intergenic
CCACTTAAAAGACTGTCCAG+TGG 0.723718 3_1:+2650682 None:intergenic
TTGTTAAGGAGAAGGCAAGG+AGG 0.739913 3_1:-2655707 Msa0344070:CDS
AAGGACAATACCTTTCCCTG+AGG 0.763391 3_1:+2651920 None:intergenic
TTTATGGAGAGATTCCATGG+TGG 0.847791 3_1:-2655650 Msa0344070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAAAAGATAATATTAT+TGG - chr3_1:2650240-2650259 Msa0344070:intron 10.0%
!!! AAATGTAAGTTTTTAAAAAA+TGG + chr3_1:2652324-2652343 None:intergenic 10.0%
!! TTAAATAATTTCATTTGAAA+GGG + chr3_1:2652374-2652393 None:intergenic 10.0%
!! TTTAAATAATTTCATTTGAA+AGG + chr3_1:2652375-2652394 None:intergenic 10.0%
!! TAAATTAAATTAATGAAGAA+AGG + chr3_1:2652407-2652426 None:intergenic 10.0%
!! AATATATTCAAATAAATATC+GGG - chr3_1:2653021-2653040 Msa0344070:intron 10.0%
!!! TCAGAAAAATTTAAGTTTAT+AGG - chr3_1:2651888-2651907 Msa0344070:intron 15.0%
!!! TACTCAAACTTTTAATAAAT+TGG + chr3_1:2652050-2652069 None:intergenic 15.0%
!! AAAAGAATTAAAAAGATTGT+CGG + chr3_1:2652840-2652859 None:intergenic 15.0%
!! ATATATTCAAATAAATATCG+GGG - chr3_1:2653022-2653041 Msa0344070:intron 15.0%
!! CATAAAAAAAAAAAATGACA+AGG + chr3_1:2653523-2653542 None:intergenic 15.0%
!!! TGTCATTTTTTTTTTTTATG+AGG - chr3_1:2653523-2653542 Msa0344070:intron 15.0%
!!! CATCATTTTCTTAAATAAAT+CGG + chr3_1:2653922-2653941 None:intergenic 15.0%
!!! TTTTGGTAAATAATAGAAAT+TGG + chr3_1:2654815-2654834 None:intergenic 15.0%
!!! ACTTTTACTATTAGAAATTT+TGG + chr3_1:2654832-2654851 None:intergenic 15.0%
!!! ATGATATGATACTTTATTTT+AGG - chr3_1:2655554-2655573 Msa0344070:intron 15.0%
!!! TTTTGGTTAATTTTTTCATA+GGG + chr3_1:2656002-2656021 None:intergenic 15.0%
!! AAAATGTTAGTTATTATGCA+AGG - chr3_1:2649912-2649931 Msa0344070:intron 20.0%
!! ATATTTAAGGGAAATAAAAG+TGG + chr3_1:2650535-2650554 None:intergenic 20.0%
!!! ATTTCCCTTAAATATTTTTG+TGG - chr3_1:2650540-2650559 Msa0344070:intron 20.0%
!! AACTAATTATGGTTCATTAA+AGG - chr3_1:2650934-2650953 Msa0344070:intron 20.0%
!! TTCTAACAACAATAATTTCA+AGG - chr3_1:2651032-2651051 Msa0344070:CDS 20.0%
!!! TCTTTCATTTGTATTTTGTT+TGG - chr3_1:2651621-2651640 Msa0344070:intron 20.0%
!!! AGTTTTTAAAAAATGGTTCA+AGG + chr3_1:2652317-2652336 None:intergenic 20.0%
!!! TCCATTTTTTTGAAGTATTT+GGG + chr3_1:2652760-2652779 None:intergenic 20.0%
!! GAATAAGTATCAAGAAATAT+TGG + chr3_1:2652806-2652825 None:intergenic 20.0%
!!! CTTTTTGAAAATATTTTCAC+CGG - chr3_1:2652855-2652874 Msa0344070:intron 20.0%
!! AAATAAATTTCATAACATGC+AGG - chr3_1:2653196-2653215 Msa0344070:intron 20.0%
!! AAAAATAGAAAAATGTTGCT+TGG - chr3_1:2654537-2654556 Msa0344070:CDS 20.0%
!! TTTAACTGGTAAAAAAATCA+AGG + chr3_1:2655265-2655284 None:intergenic 20.0%
!!! GAAATAAGAGATATTTTCAA+AGG - chr3_1:2655403-2655422 Msa0344070:intron 20.0%
!!! GTTTTGGTTAATTTTTTCAT+AGG + chr3_1:2656003-2656022 None:intergenic 20.0%
!! TTAGAGAAATAAATAACAAG+AGG + chr3_1:2656210-2656229 None:intergenic 20.0%
! TTCAATTCCAAATCATTACT+TGG - chr3_1:2649475-2649494 Msa0344070:intron 25.0%
!! ATTTTTATCTCTCAGTTGTT+AGG - chr3_1:2649510-2649529 Msa0344070:intron 25.0%
! AATCAATGAAGCAATTGTTA+AGG - chr3_1:2649700-2649719 Msa0344070:intron 25.0%
!!! TTTTGAAGTTCAATAGTTTG+AGG - chr3_1:2649863-2649882 Msa0344070:intron 25.0%
! AATAGTTTGAGGAATAAAGT+AGG - chr3_1:2649874-2649893 Msa0344070:intron 25.0%
! ATAGTTTGAGGAATAAAGTA+GGG - chr3_1:2649875-2649894 Msa0344070:intron 25.0%
! ATCACTTGGTTTATTATGAA+AGG - chr3_1:2650097-2650116 Msa0344070:intron 25.0%
! GAAAGGTTAATTAGCTAAAT+AGG - chr3_1:2650114-2650133 Msa0344070:intron 25.0%
! TTATTGCAAACAAACATGAA+TGG - chr3_1:2650150-2650169 Msa0344070:intron 25.0%
! ACTGCCACAAAAATATTTAA+GGG + chr3_1:2650547-2650566 None:intergenic 25.0%
! TACTGCCACAAAAATATTTA+AGG + chr3_1:2650548-2650567 None:intergenic 25.0%
!!! TAAATATTTTTGTGGCAGTA+TGG - chr3_1:2650548-2650567 Msa0344070:intron 25.0%
!!! AAATATTTTTGTGGCAGTAT+GGG - chr3_1:2650549-2650568 Msa0344070:intron 25.0%
!!! TTGCTTTATCGATTTCAAAA+CGG - chr3_1:2650678-2650697 Msa0344070:CDS 25.0%
! CAAACATCATTAGAAAAATG+TGG - chr3_1:2650854-2650873 Msa0344070:intron 25.0%
!! TTCATTAAAGGATGTGATTT+TGG - chr3_1:2650946-2650965 Msa0344070:intron 25.0%
! TATAGAAGATGTGAAGAAAA+AGG - chr3_1:2651066-2651085 Msa0344070:CDS 25.0%
! ATAGAAGATGTGAAGAAAAA+GGG - chr3_1:2651067-2651086 Msa0344070:CDS 25.0%
! GTATTTATATCTATAGGAGA+TGG + chr3_1:2651169-2651188 None:intergenic 25.0%
! TCCTATAGATATAAATACAC+TGG - chr3_1:2651171-2651190 Msa0344070:intron 25.0%
! TCCAGTGTATTTATATCTAT+AGG + chr3_1:2651175-2651194 None:intergenic 25.0%
! CATACAATCTCTACTAATAT+TGG + chr3_1:2651205-2651224 None:intergenic 25.0%
! CAAAATACAAATGAAAGAAC+TGG + chr3_1:2651619-2651638 None:intergenic 25.0%
! GAATGTAATTGAGTAGAATT+TGG - chr3_1:2651643-2651662 Msa0344070:intron 25.0%
!!! GAGGTTAATAATTTGTTAAG+AGG - chr3_1:2651986-2652005 Msa0344070:CDS 25.0%
! CTTAAATCATGATTGTTTCA+TGG - chr3_1:2652102-2652121 Msa0344070:CDS 25.0%
! TTTGATATTGCAGTCTAATA+TGG - chr3_1:2652127-2652146 Msa0344070:CDS 25.0%
! AAGGGAAAAATATTCTTCTA+TGG + chr3_1:2652356-2652375 None:intergenic 25.0%
!!! CTCCATTTTTTTGAAGTATT+TGG + chr3_1:2652761-2652780 None:intergenic 25.0%
! TACAACATAGTGTCTTTAAA+TGG + chr3_1:2652968-2652987 None:intergenic 25.0%
! TTTGTTAAGTAACATAACTG+AGG + chr3_1:2653559-2653578 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAATC+TGG - chr3_1:2653815-2653834 Msa0344070:intron 25.0%
! ATATTCAGATGGATCAATTA+AGG - chr3_1:2654415-2654434 Msa0344070:CDS 25.0%
!!! TTTCTATTTTTCTGTCTTAG+AGG + chr3_1:2654528-2654547 None:intergenic 25.0%
!! TATCTGTTTTCTTTTGAACT+AGG - chr3_1:2654585-2654604 Msa0344070:CDS 25.0%
!! ATCTGTTTTCTTTTGAACTA+GGG - chr3_1:2654586-2654605 Msa0344070:CDS 25.0%
! AAGGTTAAAACTTTCTGTTA+TGG - chr3_1:2654786-2654805 Msa0344070:CDS 25.0%
! TACAATAACATGCACAAAAT+AGG - chr3_1:2654869-2654888 Msa0344070:intron 25.0%
! TAGTGAAAAACAAGGAATAA+AGG - chr3_1:2654992-2655011 Msa0344070:intron 25.0%
! ATACTTCATGTCATAAATCA+AGG + chr3_1:2655034-2655053 None:intergenic 25.0%
!!! GGTCAACTTTTTTTTTTAAC+TGG + chr3_1:2655279-2655298 None:intergenic 25.0%
!! ATATTTTCAAAGGTAAGCAT+GGG - chr3_1:2655413-2655432 Msa0344070:intron 25.0%
! GATCATGGAAAGTTATATAT+TGG - chr3_1:2655451-2655470 Msa0344070:intron 25.0%
! AATATAACACAACACACAAT+AGG - chr3_1:2655577-2655596 Msa0344070:intron 25.0%
! ATATAACACAACACACAATA+GGG - chr3_1:2655578-2655597 Msa0344070:intron 25.0%
!! TCAGTAAGGATTGAAATTTT+GGG + chr3_1:2655817-2655836 None:intergenic 25.0%
! GGGACATAAATAATAGTATT+AGG + chr3_1:2655935-2655954 None:intergenic 25.0%
!!! ACTTCTTTTTTTTTTATCCG+CGG + chr3_1:2655969-2655988 None:intergenic 25.0%
! ACCACAAAAAATAATGTCAT+TGG + chr3_1:2656143-2656162 None:intergenic 25.0%
!! CTAATCTTTGTTGTAATACT+AGG + chr3_1:2656361-2656380 None:intergenic 25.0%
!!! ATGTTGATTTTTGAGCACTT+GGG + chr3_1:2649078-2649097 None:intergenic 30.0%
!!! AATGTTGATTTTTGAGCACT+TGG + chr3_1:2649079-2649098 None:intergenic 30.0%
!! CATTTCTAGTAACCAACAAA+AGG - chr3_1:2649095-2649114 Msa0344070:CDS 30.0%
TGATAGACCTCAAATACATA+TGG - chr3_1:2649177-2649196 Msa0344070:CDS 30.0%
GATAGACCTCAAATACATAT+GGG - chr3_1:2649178-2649197 Msa0344070:CDS 30.0%
CAAGATGCATATCAAACTTA+AGG - chr3_1:2649270-2649289 Msa0344070:CDS 30.0%
CAGAGAATTCAAAGAATTCT+TGG + chr3_1:2649304-2649323 None:intergenic 30.0%
GTCCTATCCAATCTTTATTA+TGG - chr3_1:2649332-2649351 Msa0344070:CDS 30.0%
TGCCATAATAAAGATTGGAT+AGG + chr3_1:2649337-2649356 None:intergenic 30.0%
GTCAATGCCATAATAAAGAT+TGG + chr3_1:2649342-2649361 None:intergenic 30.0%
TGCAATACAATCAAAACATC+CGG - chr3_1:2649373-2649392 Msa0344070:intron 30.0%
AGGTTAAAAGATCTTTGTTC+CGG + chr3_1:2649395-2649414 None:intergenic 30.0%
! GCATTTCTTCTGACTTTTTA+AGG + chr3_1:2649415-2649434 None:intergenic 30.0%
CAACAAACCAAGTAATGATT+TGG + chr3_1:2649485-2649504 None:intergenic 30.0%
AATTCATTCCAAACAAGCTT+CGG + chr3_1:2649596-2649615 None:intergenic 30.0%
AAAAGACTTTCACAAAGTTG+AGG + chr3_1:2649623-2649642 None:intergenic 30.0%
GAAGCATGAAAATAGAAGTT+TGG - chr3_1:2649646-2649665 Msa0344070:intron 30.0%
! TGTTAGTTCTTTGAATTCTG+AGG - chr3_1:2649673-2649692 Msa0344070:intron 30.0%
TATTATCAGGTCATGCTTTA+TGG - chr3_1:2649755-2649774 Msa0344070:CDS 30.0%
! TAAAGCAACAACATCTTTTG+TGG + chr3_1:2650666-2650685 None:intergenic 30.0%
AGTTCATCAGGAACTAATTA+TGG - chr3_1:2650923-2650942 Msa0344070:intron 30.0%
ATGTGAAGAAAAAGGGTTTA+AGG - chr3_1:2651074-2651093 Msa0344070:CDS 30.0%
TGCTACAAATAACATGCATT+TGG - chr3_1:2651336-2651355 Msa0344070:CDS 30.0%
! CTGCATGCATTTTATAAGAA+TGG + chr3_1:2651446-2651465 None:intergenic 30.0%
CAACTAGCTAAAGACATATA+TGG + chr3_1:2651670-2651689 None:intergenic 30.0%
CATATATGTCTTTAGCTAGT+TGG - chr3_1:2651668-2651687 Msa0344070:intron 30.0%
TTTCCATTTGTTCAGATCAT+CGG - chr3_1:2651717-2651736 Msa0344070:intron 30.0%
ATGTGTCTAACTGAATCAAT+AGG + chr3_1:2651852-2651871 None:intergenic 30.0%
! ATTGATTCAGTTAGACACAT+TGG - chr3_1:2651852-2651871 Msa0344070:intron 30.0%
TTATCATGAAGAAAGTCCTA+GGG - chr3_1:2651921-2651940 Msa0344070:intron 30.0%
TGTATTTAACAGAACGCAAA+TGG + chr3_1:2651965-2651984 None:intergenic 30.0%
AAGTCACTAAATGATACGTT+TGG - chr3_1:2652072-2652091 Msa0344070:CDS 30.0%
AAAATCAAAAATCGTGACAG+AGG + chr3_1:2652240-2652259 None:intergenic 30.0%
!!! TGTCACGATTTTTGATTTTG+TGG - chr3_1:2652241-2652260 Msa0344070:intron 30.0%
! TGAACAAGCTTTTATCAGTT+GGG + chr3_1:2652462-2652481 None:intergenic 30.0%
CAACAAGTAATATGTATGAG+CGG - chr3_1:2652726-2652745 Msa0344070:intron 30.0%
GCCCAAATACTTCAAAAAAA+TGG - chr3_1:2652756-2652775 Msa0344070:intron 30.0%
ATCATGTATCTGAGAAATAC+CGG + chr3_1:2652877-2652896 None:intergenic 30.0%
ATTTCTCAGATACATGATCT+AGG - chr3_1:2652879-2652898 Msa0344070:intron 30.0%
!!! AAGACAACTGTGTTTTTAGT+TGG + chr3_1:2652915-2652934 None:intergenic 30.0%
! CTAAAAACACAGTTGTCTTT+TGG - chr3_1:2652916-2652935 Msa0344070:intron 30.0%
TAATTGTGATCATAACACGT+AGG + chr3_1:2653065-2653084 None:intergenic 30.0%
TCCAAATGTATCATAAGTGT+TGG - chr3_1:2653251-2653270 Msa0344070:intron 30.0%
TCCAACACTTATGATACATT+TGG + chr3_1:2653255-2653274 None:intergenic 30.0%
ACTGAGAAGCAAGATTAAAA+GGG - chr3_1:2653304-2653323 Msa0344070:intron 30.0%
! GCATCTGAGATTATATTAAG+AGG - chr3_1:2653404-2653423 Msa0344070:intron 30.0%
TAAGTAACATAACTGAGGTA+GGG + chr3_1:2653554-2653573 None:intergenic 30.0%
TTAAGTAACATAACTGAGGT+AGG + chr3_1:2653555-2653574 None:intergenic 30.0%
CTTAACAAATGTCATGACAA+TGG - chr3_1:2653570-2653589 Msa0344070:CDS 30.0%
CAACTTAATTAAGTGCTCAT+AGG + chr3_1:2653804-2653823 None:intergenic 30.0%
TTGCTTTCCTACATGAAAAA+TGG + chr3_1:2654001-2654020 None:intergenic 30.0%
!!! GTTTTTCAAGTGTTACAAGT+TGG + chr3_1:2654157-2654176 None:intergenic 30.0%
CTAACAAAACTATTGTCTGT+TGG - chr3_1:2654617-2654636 Msa0344070:CDS 30.0%
!!! TTGGTGTTTTGAAAAGGTAT+GGG - chr3_1:2654636-2654655 Msa0344070:CDS 30.0%
! TTGAAAAGGTATGGGATATT+AGG - chr3_1:2654644-2654663 Msa0344070:CDS 30.0%
! TGAAAAGGTATGGGATATTA+GGG - chr3_1:2654645-2654664 Msa0344070:CDS 30.0%
! CTTTTCAATTTATGAACCAC+TGG - chr3_1:2654723-2654742 Msa0344070:CDS 30.0%
ATCCACTGATAAAACCATAA+GGG - chr3_1:2654762-2654781 Msa0344070:CDS 30.0%
!! AAGTTTTAACCTTACCCTTA+TGG + chr3_1:2654779-2654798 None:intergenic 30.0%
CAAGACATTCAAGATTTCTT+TGG + chr3_1:2654908-2654927 None:intergenic 30.0%
TCTTGAAGTAATAGTCATGA+AGG - chr3_1:2654923-2654942 Msa0344070:intron 30.0%
TTCGCAATTAGTGAAAAACA+AGG - chr3_1:2654984-2655003 Msa0344070:intron 30.0%
TTGTCATCTTAGAATTGAGT+TGG - chr3_1:2655109-2655128 Msa0344070:intron 30.0%
TGTCATCTTAGAATTGAGTT+GGG - chr3_1:2655110-2655129 Msa0344070:intron 30.0%
CAGCTATGTGTGATTTAATA+GGG + chr3_1:2655146-2655165 None:intergenic 30.0%
TCAGCTATGTGTGATTTAAT+AGG + chr3_1:2655147-2655166 None:intergenic 30.0%
!!! GATTTTAAGGTCTGAAAATG+TGG + chr3_1:2655177-2655196 None:intergenic 30.0%
! TCCTAAGTTTTTGTTAACCA+AGG + chr3_1:2655322-2655341 None:intergenic 30.0%
! GATATTTTCAAAGGTAAGCA+TGG - chr3_1:2655412-2655431 Msa0344070:intron 30.0%
!! GTGTTGTTTGACATAGATTA+TGG - chr3_1:2655513-2655532 Msa0344070:intron 30.0%
TAGGCTACAATTGAATTGAT+TGG + chr3_1:2655651-2655670 None:intergenic 30.0%
! AACTTTGCTTTGTTCTTACA+TGG - chr3_1:2655754-2655773 Msa0344070:CDS 30.0%
!! ACATGGATGGATTATGATAT+AGG - chr3_1:2655771-2655790 Msa0344070:CDS 30.0%
!! GATGGATTATGATATAGGAA+TGG - chr3_1:2655776-2655795 Msa0344070:CDS 30.0%
! GTCAGTAAGGATTGAAATTT+TGG + chr3_1:2655818-2655837 None:intergenic 30.0%
ATTTCAATCCTTACTGACAA+AGG - chr3_1:2655820-2655839 Msa0344070:CDS 30.0%
ATCAAATTCTCAAACAGATC+TGG - chr3_1:2656050-2656069 Msa0344070:CDS 30.0%
!!! GCCAATGACATTATTTTTTG+TGG - chr3_1:2656139-2656158 Msa0344070:CDS 30.0%
!!! TATTTTTTGTGGTACTGAGA+AGG - chr3_1:2656150-2656169 Msa0344070:CDS 30.0%
!!! ATTTTTTGTGGTACTGAGAA+GGG - chr3_1:2656151-2656170 Msa0344070:CDS 30.0%
! ACATTTCCCAAATTTTCAAC+AGG - chr3_1:2656251-2656270 Msa0344070:CDS 30.0%
! CATTTCCCAAATTTTCAACA+GGG - chr3_1:2656252-2656271 Msa0344070:exon 30.0%
ATTGAAGTTCTTCTTACAGA+GGG + chr3_1:2656284-2656303 None:intergenic 30.0%
AATTGAAGTTCTTCTTACAG+AGG + chr3_1:2656285-2656304 None:intergenic 30.0%
GTGGAAGATAAATGTTGTCT+AGG + chr3_1:2649054-2649073 None:intergenic 35.0%
!!! GAGAAAAGTTAGCCTTTTGT+TGG + chr3_1:2649110-2649129 None:intergenic 35.0%
AAAGATTGGATAGGACTGAT+TGG + chr3_1:2649328-2649347 None:intergenic 35.0%
! GCATTTTCTTCAAGCTGTTT+TGG - chr3_1:2649565-2649584 Msa0344070:CDS 35.0%
TGAAGCAATTGTTAAGGAGA+AGG - chr3_1:2649706-2649725 Msa0344070:intron 35.0%
! TTGTTGTTGTCTTAATCCTC+TGG - chr3_1:2649942-2649961 Msa0344070:intron 35.0%
!! TCTTAATCCTCTGGTTCTAT+GGG - chr3_1:2649951-2649970 Msa0344070:CDS 35.0%
!!! TTCTGGTCAAGTTTTGAACT+CGG - chr3_1:2650032-2650051 Msa0344070:CDS 35.0%
GAGCTCGCAAATTTCAATTA+AGG + chr3_1:2650076-2650095 None:intergenic 35.0%
CTAAGAGTGACTTACTGATA+TGG - chr3_1:2650341-2650360 Msa0344070:intron 35.0%
CGATTAATAAATCCTCGACA+CGG + chr3_1:2650733-2650752 None:intergenic 35.0%
TCAAAGAGATGGAATTCTAG+TGG + chr3_1:2650770-2650789 None:intergenic 35.0%
GAGAGTTTAATCAGTTCATC+AGG - chr3_1:2650911-2650930 Msa0344070:intron 35.0%
! ATTTCTACACCTTCTAGAGA+CGG - chr3_1:2651516-2651535 Msa0344070:intron 35.0%
TTACATACCTTGGTATGCAT+AGG + chr3_1:2651588-2651607 None:intergenic 35.0%
GGTTACATAGTTACATACCT+TGG + chr3_1:2651598-2651617 None:intergenic 35.0%
ATAGGTTAGCAGCTAAAATC+TGG + chr3_1:2651834-2651853 None:intergenic 35.0%
CTTATCATGAAGAAAGTCCT+AGG - chr3_1:2651920-2651939 Msa0344070:intron 35.0%
CGTCAAAGGAGAATATCATA+TGG - chr3_1:2652022-2652041 Msa0344070:CDS 35.0%
ACAATCATGATTTAAGTCCC+TGG + chr3_1:2652098-2652117 None:intergenic 35.0%
AGACTTATATTGTCACGATG+TGG - chr3_1:2652271-2652290 Msa0344070:intron 35.0%
! CTGAACAAGCTTTTATCAGT+TGG + chr3_1:2652463-2652482 None:intergenic 35.0%
TCCATTCTATCAAATCTTGC+TGG - chr3_1:2652553-2652572 Msa0344070:intron 35.0%
!!! CATGTTTTGATGATAGTGAG+AGG + chr3_1:2652641-2652660 None:intergenic 35.0%
ACATGATACGAAACTTCAAC+TGG - chr3_1:2652656-2652675 Msa0344070:intron 35.0%
GATCCAATATGACATGGATA+CGG + chr3_1:2653111-2653130 None:intergenic 35.0%
GATACAGATCCAATATGACA+TGG + chr3_1:2653117-2653136 None:intergenic 35.0%
AGGATACAAGCATAGATGTA+TGG - chr3_1:2653216-2653235 Msa0344070:intron 35.0%
GACTGAGAAGCAAGATTAAA+AGG - chr3_1:2653303-2653322 Msa0344070:intron 35.0%
! GGAATTGGATGAAAGACTTT+TGG - chr3_1:2653454-2653473 Msa0344070:intron 35.0%
TGCATGTATAATTATGCCTC+AGG - chr3_1:2653485-2653504 Msa0344070:intron 35.0%
GCATGTATAATTATGCCTCA+GGG - chr3_1:2653486-2653505 Msa0344070:intron 35.0%
TATAATTATGCCTCAGGGAA+AGG - chr3_1:2653491-2653510 Msa0344070:intron 35.0%
ACTCAACAAATTCAGCTCTT+AGG - chr3_1:2653610-2653629 Msa0344070:CDS 35.0%
ATTAAGTGCTCATAGGCTAT+AGG + chr3_1:2653797-2653816 None:intergenic 35.0%
TATCCAATCTGGATCTTACT+TGG - chr3_1:2653826-2653845 Msa0344070:intron 35.0%
!!! AAGACAGCCATTTTTCATGT+AGG - chr3_1:2653991-2654010 Msa0344070:CDS 35.0%
ACTTTCAAACATAACCTGGA+TGG - chr3_1:2654065-2654084 Msa0344070:CDS 35.0%
TGAGTACTTACTGATGTGTT+TGG + chr3_1:2654126-2654145 None:intergenic 35.0%
TAAAGTTGCAATATGCCTCA+AGG + chr3_1:2654215-2654234 None:intergenic 35.0%
TTGCATCACCTTAATCATCA+TGG - chr3_1:2654282-2654301 Msa0344070:CDS 35.0%
TCTTACCACCATGATGATTA+AGG + chr3_1:2654293-2654312 None:intergenic 35.0%
TGTTCATACACAAATCCTTG+AGG - chr3_1:2654328-2654347 Msa0344070:CDS 35.0%
! TTGTTTGGTGGATATTCAGA+TGG - chr3_1:2654404-2654423 Msa0344070:CDS 35.0%
!!! TGTCTGTTGGTGTTTTGAAA+AGG - chr3_1:2654630-2654649 Msa0344070:CDS 35.0%
!!! GTTGGTGTTTTGAAAAGGTA+TGG - chr3_1:2654635-2654654 Msa0344070:CDS 35.0%
! GAAAAGGTATGGGATATTAG+GGG - chr3_1:2654646-2654665 Msa0344070:CDS 35.0%
! AAAAGGTATGGGATATTAGG+GGG - chr3_1:2654647-2654666 Msa0344070:CDS 35.0%
!! TAGTCTTGTATGGGACATTA+AGG - chr3_1:2654678-2654697 Msa0344070:CDS 35.0%
GATCCACTGATAAAACCATA+AGG - chr3_1:2654761-2654780 Msa0344070:CDS 35.0%
!!! TACCCTTATGGTTTTATCAG+TGG + chr3_1:2654767-2654786 None:intergenic 35.0%
CTGATAAAACCATAAGGGTA+AGG - chr3_1:2654767-2654786 Msa0344070:CDS 35.0%
TAACATGCACAAAATAGGTG+TGG - chr3_1:2654874-2654893 Msa0344070:intron 35.0%
ATGACAACTAGATTAGAGAG+AGG + chr3_1:2655096-2655115 None:intergenic 35.0%
GCCTTGGTTAACAAAAACTT+AGG - chr3_1:2655318-2655337 Msa0344070:intron 35.0%
!!! TACAGGTTAGTGTTTTTTCC+TGG - chr3_1:2655491-2655510 Msa0344070:intron 35.0%
AATCTATGTCAAACAACACC+AGG + chr3_1:2655512-2655531 None:intergenic 35.0%
CAATTGTAGCCTATAGAGAT+TGG - chr3_1:2655658-2655677 Msa0344070:CDS 35.0%
ACTATAGAGCCAATCTCTAT+AGG + chr3_1:2655670-2655689 None:intergenic 35.0%
TGTTGAAGGAACAACATTCA+AGG - chr3_1:2655701-2655720 Msa0344070:CDS 35.0%
! TTGCTTTGTTCTTACATGGA+TGG - chr3_1:2655758-2655777 Msa0344070:CDS 35.0%
CATTATCTCCTTTGTCAGTA+AGG + chr3_1:2655831-2655850 None:intergenic 35.0%
TACTGACAAAGGAGATAATG+TGG - chr3_1:2655831-2655850 Msa0344070:CDS 35.0%
TATCCGCGGACTTATATTTA+GGG + chr3_1:2655955-2655974 None:intergenic 35.0%
TTATCCGCGGACTTATATTT+AGG + chr3_1:2655956-2655975 None:intergenic 35.0%
!! CAGTTGATTTTGCGTTGTTT+TGG + chr3_1:2656019-2656038 None:intergenic 35.0%
!! AGAGGAGTACCAAAAAAGTT+GGG - chr3_1:2656076-2656095 Msa0344070:CDS 35.0%
!!! GATAATCTCCCCAACTTTTT+TGG + chr3_1:2656088-2656107 None:intergenic 35.0%
! TCTTTGTTGTAATACTAGGC+TGG + chr3_1:2656357-2656376 None:intergenic 35.0%
! ACAACAAAGATTAGCCAGTA+TGG - chr3_1:2656367-2656386 Msa0344070:five_prime_UTR 35.0%
AATGACTAAGCTTTCCATAC+TGG + chr3_1:2656384-2656403 None:intergenic 35.0%
CTAGCACCCATATGTATTTG+AGG + chr3_1:2649187-2649206 None:intergenic 40.0%
! TCATCTTCATCAAGCATTGC+TGG + chr3_1:2649446-2649465 None:intergenic 40.0%
TCAGTTGTTAGGAAGCTTCA+AGG - chr3_1:2649521-2649540 Msa0344070:intron 40.0%
CAATTGTTAAGGAGAAGGCA+AGG - chr3_1:2649711-2649730 Msa0344070:intron 40.0%
!! GGAGTGTTTGGTGTATTATC+AGG - chr3_1:2649742-2649761 Msa0344070:CDS 40.0%
TGCTTTATGGAGAGATTCCA+TGG - chr3_1:2649768-2649787 Msa0344070:CDS 40.0%
TTTATGGAGAGATTCCATGG+TGG - chr3_1:2649771-2649790 Msa0344070:CDS 40.0%
!! GTCTTAATCCTCTGGTTCTA+TGG - chr3_1:2649950-2649969 Msa0344070:CDS 40.0%
! TGACTGGTCAATGATTGTTC+TGG - chr3_1:2650015-2650034 Msa0344070:CDS 40.0%
AATTTGCGAGCTCAATCACT+TGG - chr3_1:2650083-2650102 Msa0344070:intron 40.0%
AGTGACTTACTGATATGGAC+AGG - chr3_1:2650346-2650365 Msa0344070:intron 40.0%
GTGACTTACTGATATGGACA+GGG - chr3_1:2650347-2650366 Msa0344070:intron 40.0%
AGAAGTTACACAGCTGGTAT+TGG + chr3_1:2650379-2650398 None:intergenic 40.0%
TGAAGTAGAAGTTACACAGC+TGG + chr3_1:2650385-2650404 None:intergenic 40.0%
! ATTTTTGTGGCAGTATGGGA+AGG - chr3_1:2650553-2650572 Msa0344070:intron 40.0%
TCACATCTTGAGGATCCATT+GGG + chr3_1:2650583-2650602 None:intergenic 40.0%
ATCACATCTTGAGGATCCAT+TGG + chr3_1:2650584-2650603 None:intergenic 40.0%
TGTTCTTGCATCACATCTTG+AGG + chr3_1:2650593-2650612 None:intergenic 40.0%
TGGTCAATCTGCTTGAATCA+AGG + chr3_1:2650640-2650659 None:intergenic 40.0%
TTGATTCAAGCAGATTGACC+AGG - chr3_1:2650639-2650658 Msa0344070:intron 40.0%
! AACAACATCTTTTGTGGACC+TGG + chr3_1:2650660-2650679 None:intergenic 40.0%
TGATTTAAATTGCCGTGTCG+AGG - chr3_1:2650718-2650737 Msa0344070:CDS 40.0%
TGCTTGCATGATCAAAGAGA+TGG + chr3_1:2650781-2650800 None:intergenic 40.0%
GCAAGCAGAAATCATAGACT+CGG - chr3_1:2650794-2650813 Msa0344070:intron 40.0%
! AACTTTCTTCGCGGTTTTTC+TGG + chr3_1:2650820-2650839 None:intergenic 40.0%
TCATCTTCGAACTTTCTTCG+CGG + chr3_1:2650829-2650848 None:intergenic 40.0%
AGTGATCTCAACTTCGAAAG+AGG - chr3_1:2650982-2651001 Msa0344070:intron 40.0%
CTCAACTTCGAAAGAGGAAA+AGG - chr3_1:2650988-2651007 Msa0344070:intron 40.0%
ATCATCAATGATGCTGCATG+AGG + chr3_1:2651286-2651305 None:intergenic 40.0%
TAAGTCCACTGAGAACATGA+GGG + chr3_1:2651375-2651394 None:intergenic 40.0%
ATAAGTCCACTGAGAACATG+AGG + chr3_1:2651376-2651395 None:intergenic 40.0%
! GTCTCTAGAAGGTGTAGAAA+TGG + chr3_1:2651517-2651536 None:intergenic 40.0%
! GAACATTTTCCGTCTCTAGA+AGG + chr3_1:2651528-2651547 None:intergenic 40.0%
AAATGTTCGTGCCAAATGCA+CGG - chr3_1:2651540-2651559 Msa0344070:intron 40.0%
AGGAAATCCTATGCATACCA+AGG - chr3_1:2651578-2651597 Msa0344070:intron 40.0%
TAGCCGATGATCTGAACAAA+TGG + chr3_1:2651723-2651742 None:intergenic 40.0%
! GGTGATCAGGTTGTAATTGA+TGG + chr3_1:2651813-2651832 None:intergenic 40.0%
AAGTCCTAGGGAACTAAGAT+TGG - chr3_1:2651933-2651952 Msa0344070:CDS 40.0%
TGATCCAATCTTAGTTCCCT+AGG + chr3_1:2651940-2651959 None:intergenic 40.0%
TGCGTTCTGTTAAATACACG+AGG - chr3_1:2651967-2651986 Msa0344070:CDS 40.0%
ACTAAATGATACGTTTGGCC+AGG - chr3_1:2652077-2652096 Msa0344070:CDS 40.0%
CTAAATGATACGTTTGGCCA+GGG - chr3_1:2652078-2652097 Msa0344070:CDS 40.0%
ATGGTTCAAGGCCAAGATTA+TGG + chr3_1:2652305-2652324 None:intergenic 40.0%
GCCAGCAAGATTTGATAGAA+TGG + chr3_1:2652557-2652576 None:intergenic 40.0%
GAGAATCATATACAGCTGCA+TGG - chr3_1:2652593-2652612 Msa0344070:intron 40.0%
GATACGAAACTTCAACTGGT+TGG - chr3_1:2652660-2652679 Msa0344070:intron 40.0%
!! CTACAGGTAAGCTTTGAAGA+AGG - chr3_1:2652691-2652710 Msa0344070:intron 40.0%
TCTCCGTATCCATGTCATAT+TGG - chr3_1:2653105-2653124 Msa0344070:intron 40.0%
! ACCTTCCATACTTTAGAGAG+AGG - chr3_1:2653281-2653300 Msa0344070:intron 40.0%
!! TCCTCTCTCTAAAGTATGGA+AGG + chr3_1:2653285-2653304 None:intergenic 40.0%
!! TCAGTCCTCTCTCTAAAGTA+TGG + chr3_1:2653289-2653308 None:intergenic 40.0%
TCTCAGATGCAGAATTACTG+AGG + chr3_1:2653394-2653413 None:intergenic 40.0%
ATTGAGCAATTTCTGCATCC+TGG - chr3_1:2653428-2653447 Msa0344070:intron 40.0%
ATTCAGCTCTTAGGTTCTGT+TGG - chr3_1:2653619-2653638 Msa0344070:CDS 40.0%
! TATCGCTAGCATTTTGTCCA+TGG - chr3_1:2653855-2653874 Msa0344070:CDS 40.0%
ATGGCTGTCTTACTTAGAAG+AGG + chr3_1:2653982-2654001 None:intergenic 40.0%
GACGACTTTCAAACATAACC+TGG - chr3_1:2654061-2654080 Msa0344070:CDS 40.0%
GCAATATGCCTCAAGGATTT+GGG + chr3_1:2654208-2654227 None:intergenic 40.0%
TGCAATATGCCTCAAGGATT+TGG + chr3_1:2654209-2654228 None:intergenic 40.0%
CATCACCTTAATCATCATGG+TGG - chr3_1:2654285-2654304 Msa0344070:CDS 40.0%
TTGCTCCCTCATATACTACA+AGG - chr3_1:2654376-2654395 Msa0344070:CDS 40.0%
TGCTCCCTCATATACTACAA+GGG - chr3_1:2654377-2654396 Msa0344070:CDS 40.0%
CAGTCCCTTGTAGTATATGA+GGG + chr3_1:2654384-2654403 None:intergenic 40.0%
ACAGTCCCTTGTAGTATATG+AGG + chr3_1:2654385-2654404 None:intergenic 40.0%
TACTACAAGGGACTGTTGTT+TGG - chr3_1:2654389-2654408 Msa0344070:CDS 40.0%
!! AGGTCACGCTCTAGATTTTA+AGG + chr3_1:2655190-2655209 None:intergenic 40.0%
GCATGAACGTAGCAAAACTA+TGG + chr3_1:2655300-2655319 None:intergenic 40.0%
TCAAACCACCTACAAGAAGT+TGG - chr3_1:2655610-2655629 Msa0344070:intron 40.0%
AGTGCAAGTAAGCATGTTGA+AGG - chr3_1:2655687-2655706 Msa0344070:CDS 40.0%
TTGCTGATGAGCTAGAGATT+AGG + chr3_1:2655888-2655907 None:intergenic 40.0%
TGTCCCTAAATATAAGTCCG+CGG - chr3_1:2655949-2655968 Msa0344070:CDS 40.0%
!! GAGAGGAGTACCAAAAAAGT+TGG - chr3_1:2656075-2656094 Msa0344070:CDS 40.0%
!! GAGGAGTACCAAAAAAGTTG+GGG - chr3_1:2656077-2656096 Msa0344070:CDS 40.0%
TACTGAGAAGGGACTAATCA+AGG - chr3_1:2656162-2656181 Msa0344070:CDS 40.0%
TAACAAGAGGTCAGATGAGT+TGG + chr3_1:2656197-2656216 None:intergenic 40.0%
TCCAGCCCTGTTGAAAATTT+GGG + chr3_1:2656260-2656279 None:intergenic 40.0%
ATCCAGCCCTGTTGAAAATT+TGG + chr3_1:2656261-2656280 None:intergenic 40.0%
TGTAATACTAGGCTGGCAAA+AGG + chr3_1:2656350-2656369 None:intergenic 40.0%
!! GATTTTTGAGCACTTGGGTG+TGG + chr3_1:2649073-2649092 None:intergenic 45.0%
TGATGAGAGAGATGCTGAGA+AGG + chr3_1:2649132-2649151 None:intergenic 45.0%
! GGGTGCTAGTTTCAATCAAC+AGG - chr3_1:2649198-2649217 Msa0344070:CDS 45.0%
GGAAGCTTCAAGGTGATGAA+TGG - chr3_1:2649531-2649550 Msa0344070:CDS 45.0%
! TGGTTTCTCCGAAGCTTGTT+TGG - chr3_1:2649585-2649604 Msa0344070:CDS 45.0%
TTGTTAAGGAGAAGGCAAGG+AGG - chr3_1:2649714-2649733 Msa0344070:intron 45.0%
!! AAGGAGGTACAAGGAGTGTT+TGG - chr3_1:2649730-2649749 Msa0344070:CDS 45.0%
!! AATCCTCTGGTTCTATGGGA+CGG - chr3_1:2649955-2649974 Msa0344070:CDS 45.0%
GGTTGAACTCTCGATTACCA+GGG + chr3_1:2649982-2650001 None:intergenic 45.0%
CTGGTAATCGAGAGTTCAAC+CGG - chr3_1:2649981-2650000 Msa0344070:CDS 45.0%
TGGTAATCGAGAGTTCAACC+GGG - chr3_1:2649982-2650001 Msa0344070:CDS 45.0%
ACCAGTCATCAATTACCTCC+CGG + chr3_1:2650003-2650022 None:intergenic 45.0%
AAGTCCACTGAGAACATGAG+GGG + chr3_1:2651374-2651393 None:intergenic 45.0%
AGGTGTAGAAATGGAGCAAG+AGG + chr3_1:2651508-2651527 None:intergenic 45.0%
GCAGCTAAAATCTGGTGATC+AGG + chr3_1:2651826-2651845 None:intergenic 45.0%
GCAACAATGACACTCGTCAA+AGG - chr3_1:2652008-2652027 Msa0344070:CDS 45.0%
!! GTGACAGAGGTTTTTAGACG+CGG + chr3_1:2652227-2652246 None:intergenic 45.0%
TGGACAGACAGCCATAATCT+TGG - chr3_1:2652291-2652310 Msa0344070:intron 45.0%
ATCTTGCTGGCACATATGCT+TGG - chr3_1:2652566-2652585 Msa0344070:intron 45.0%
GTGTTGTGCAGCAACAACTA+AGG - chr3_1:2653169-2653188 Msa0344070:intron 45.0%
ACTGCCTTATAGCCATCTCA+TGG - chr3_1:2653336-2653355 Msa0344070:intron 45.0%
CAAGCCATGAGATGGCTATA+AGG + chr3_1:2653343-2653362 None:intergenic 45.0%
CTTATAGCCATCTCATGGCT+TGG - chr3_1:2653341-2653360 Msa0344070:intron 45.0%
TTGACATCCAAGCCATGAGA+TGG + chr3_1:2653351-2653370 None:intergenic 45.0%
CTTTCATCCAATTCCACTCC+AGG + chr3_1:2653449-2653468 None:intergenic 45.0%
AAGGACAATACCTTTCCCTG+AGG + chr3_1:2653504-2653523 None:intergenic 45.0%
GCTCTTAGGTTCTGTTGGAT+TGG - chr3_1:2653624-2653643 Msa0344070:CDS 45.0%
TAAGCACCTAAGAGACTGCT+TGG - chr3_1:2653671-2653690 Msa0344070:CDS 45.0%
AAGCACCTAAGAGACTGCTT+GGG - chr3_1:2653672-2653691 Msa0344070:CDS 45.0%
CTGCCAAGTAAGATCCAGAT+TGG + chr3_1:2653832-2653851 None:intergenic 45.0%
!! CATTTTGTCCATGGACTGAC+TGG - chr3_1:2653864-2653883 Msa0344070:CDS 45.0%
! TTTTCTGTCCAGTCAGTCCA+TGG + chr3_1:2653875-2653894 None:intergenic 45.0%
! ATGGACTGACTGGACAGAAA+AGG - chr3_1:2653874-2653893 Msa0344070:CDS 45.0%
GCAATTCTCGGAAGGAGTAA+AGG - chr3_1:2654029-2654048 Msa0344070:CDS 45.0%
AAACATAACCTGGATGGCTG+AGG - chr3_1:2654071-2654090 Msa0344070:CDS 45.0%
GATGGCTGAGGAGTTACATA+GGG - chr3_1:2654083-2654102 Msa0344070:CDS 45.0%
CATGTACACCCAAATCCTTG+AGG - chr3_1:2654197-2654216 Msa0344070:CDS 45.0%
CATACACAAATCCTTGAGGC+AGG - chr3_1:2654332-2654351 Msa0344070:CDS 45.0%
! TACAAGGGACTGTTGTTTGG+TGG - chr3_1:2654392-2654411 Msa0344070:CDS 45.0%
!! GCACTCAGCTAGTCTTGTAT+GGG - chr3_1:2654669-2654688 Msa0344070:CDS 45.0%
CCACTTAAAAGACTGTCCAG+TGG + chr3_1:2654742-2654761 None:intergenic 45.0%
! CCACTGGACAGTCTTTTAAG+TGG - chr3_1:2654739-2654758 Msa0344070:CDS 45.0%
TCGTTGAACCATGCACTATC+AGG + chr3_1:2655219-2655238 None:intergenic 45.0%
GTGCATGGTTCAACGAATCT+TGG - chr3_1:2655223-2655242 Msa0344070:intron 45.0%
! GTTTTGCTACGTTCATGCCT+TGG - chr3_1:2655302-2655321 Msa0344070:intron 45.0%
CACAACACACAATAGGGAAC+TGG - chr3_1:2655584-2655603 Msa0344070:intron 45.0%
AACCACCTACAAGAAGTTGG+AGG - chr3_1:2655613-2655632 Msa0344070:intron 45.0%
TTCCTCCAACTTCTTGTAGG+TGG + chr3_1:2655618-2655637 None:intergenic 45.0%
TGCTTCCTCCAACTTCTTGT+AGG + chr3_1:2655621-2655640 None:intergenic 45.0%
AGGAGATAATGTGGTAGCCA+TGG - chr3_1:2655840-2655859 Msa0344070:CDS 45.0%
TAATGTGGTAGCCATGGAAG+TGG - chr3_1:2655846-2655865 Msa0344070:CDS 45.0%
GAAGTCTTCTACCACTTCCA+TGG + chr3_1:2655860-2655879 None:intergenic 45.0%
CTCAAACAGATCTGGTTGAG+AGG - chr3_1:2656058-2656077 Msa0344070:CDS 45.0%
AAGTTGGGGAGATTATCAGC+AGG - chr3_1:2656091-2656110 Msa0344070:CDS 45.0%
AGTTGGGGAGATTATCAGCA+GGG - chr3_1:2656092-2656111 Msa0344070:CDS 45.0%
! TCCCAAATTTTCAACAGGGC+TGG - chr3_1:2656256-2656275 Msa0344070:exon 45.0%
!! TAATATATTCAAATAAATAT+CGG - chr3_1:2653020-2653039 Msa0344070:intron 5.0%
CTGCAATAACTGCTCCACCA+TGG + chr3_1:2649788-2649807 None:intergenic 50.0%
CGGTTGAACTCTCGATTACC+AGG + chr3_1:2649983-2650002 None:intergenic 50.0%
TAATCGAGAGTTCAACCGGG+AGG - chr3_1:2649985-2650004 Msa0344070:CDS 50.0%
! ACCGGGAGGTAATTGATGAC+TGG - chr3_1:2649999-2650018 Msa0344070:CDS 50.0%
GTATGGGAAGGTTCACCCAA+TGG - chr3_1:2650565-2650584 Msa0344070:intron 50.0%
AGTTCCCCTCATGTTCTCAG+TGG - chr3_1:2651367-2651386 Msa0344070:CDS 50.0%
CGGCTATTAATCTGCTGCAG+AGG - chr3_1:2651737-2651756 Msa0344070:intron 50.0%
GCAATTGTGGCATGACGCTA+AGG + chr3_1:2652195-2652214 None:intergenic 50.0%
! GCATGGCTTCTGAGAAAGAC+AGG - chr3_1:2652610-2652629 Msa0344070:intron 50.0%
CTGGTTGGATCAGAGTCTAC+AGG - chr3_1:2652675-2652694 Msa0344070:intron 50.0%
GCAGAATTACTGAGGCTGTC+TGG + chr3_1:2653386-2653405 None:intergenic 50.0%
GCAATTTCTGCATCCTGGAG+TGG - chr3_1:2653433-2653452 Msa0344070:intron 50.0%
TCTGCATCCTGGAGTGGAAT+TGG - chr3_1:2653439-2653458 Msa0344070:intron 50.0%
GTTCTCCCAAGCAGTCTCTT+AGG + chr3_1:2653680-2653699 None:intergenic 50.0%
ATGTAACTCCTCAGCCATCC+AGG + chr3_1:2654082-2654101 None:intergenic 50.0%
GGATGGCTGAGGAGTTACAT+AGG - chr3_1:2654082-2654101 Msa0344070:CDS 50.0%
TAAAGTTGCGACCTGCCTCA+AGG + chr3_1:2654346-2654365 None:intergenic 50.0%
!! GGCACTCAGCTAGTCTTGTA+TGG - chr3_1:2654668-2654687 Msa0344070:CDS 50.0%
TGTGCGCGCAAATGATGAAC+TGG + chr3_1:2654951-2654970 None:intergenic 50.0%
GTTCATCATTTGCGCGCACA+TGG - chr3_1:2654951-2654970 Msa0344070:intron 50.0%
! AATCTAGAGCGTGACCTGAG+TGG - chr3_1:2655193-2655212 Msa0344070:intron 50.0%
! AGGTAAGCATGGGAAGTGCA+TGG - chr3_1:2655423-2655442 Msa0344070:intron 50.0%
AAGTGCATGGCAGTGGATCA+TGG - chr3_1:2655436-2655455 Msa0344070:intron 50.0%
CTGCACAGACTCAAGCATAC+AGG - chr3_1:2655474-2655493 Msa0344070:intron 50.0%
CTCATCAGCAAGCAGCATTC+AGG - chr3_1:2655897-2655916 Msa0344070:CDS 50.0%
! GGAGAAGGCAAGGAGGTACA+AGG - chr3_1:2649721-2649740 Msa0344070:CDS 55.0%
! AAACTCGAGCGCCGTGCATT+TGG + chr3_1:2651554-2651573 None:intergenic 55.0%
!!! CACGGCGCTCGAGTTTTTTC+AGG - chr3_1:2651558-2651577 Msa0344070:intron 55.0%
GCTGGCACATATGCTTGGAC+AGG - chr3_1:2652571-2652590 Msa0344070:intron 55.0%
CATGCACTATCAGGCCACTC+AGG + chr3_1:2655210-2655229 None:intergenic 55.0%
! CTGAGTGGCCTGATAGTGCA+TGG - chr3_1:2655208-2655227 Msa0344070:intron 55.0%
GGAGATTATCAGCAGGGAGC+AGG - chr3_1:2656098-2656117 Msa0344070:CDS 55.0%
GGTCCGTCCCATAGAACCAG+AGG + chr3_1:2649961-2649980 None:intergenic 60.0%
! TGGTTCTATGGGACGGACCC+TGG - chr3_1:2649962-2649981 Msa0344070:CDS 60.0%
GCGGTCTGCGACTGCAATTG+TGG + chr3_1:2652208-2652227 None:intergenic 60.0%
! GCATGGGAAGTGCATGGCAG+TGG - chr3_1:2655429-2655448 Msa0344070:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 2649026 2656417 2649026 ID=Msa0344070;Name=Msa0344070
chr3_1 mRNA 2649026 2656417 2649026 ID=Msa0344070-mRNA-1;Parent=Msa0344070;Name=Msa0344070-mRNA-1;_AED=0.14;_eAED=0.17;_QI=147|0.91|0.92|1|0.83|0.92|13|0|1143
chr3_1 exon 2649026 2649376 2649026 ID=Msa0344070-mRNA-1:exon:827;Parent=Msa0344070-mRNA-1
chr3_1 exon 2649525 2649650 2649525 ID=Msa0344070-mRNA-1:exon:826;Parent=Msa0344070-mRNA-1
chr3_1 exon 2649721 2649867 2649721 ID=Msa0344070-mRNA-1:exon:825;Parent=Msa0344070-mRNA-1
chr3_1 exon 2649948 2650058 2649948 ID=Msa0344070-mRNA-1:exon:824;Parent=Msa0344070-mRNA-1
chr3_1 exon 2650430 2650552 2650430 ID=Msa0344070-mRNA-1:exon:823;Parent=Msa0344070-mRNA-1
chr3_1 exon 2650660 2650791 2650660 ID=Msa0344070-mRNA-1:exon:822;Parent=Msa0344070-mRNA-1
chr3_1 exon 2651007 2651126 2651007 ID=Msa0344070-mRNA-1:exon:821;Parent=Msa0344070-mRNA-1
chr3_1 exon 2651309 2651430 2651309 ID=Msa0344070-mRNA-1:exon:820;Parent=Msa0344070-mRNA-1
chr3_1 exon 2651931 2652225 2651931 ID=Msa0344070-mRNA-1:exon:819;Parent=Msa0344070-mRNA-1
chr3_1 exon 2653570 2653711 2653570 ID=Msa0344070-mRNA-1:exon:818;Parent=Msa0344070-mRNA-1
chr3_1 exon 2653844 2654877 2653844 ID=Msa0344070-mRNA-1:exon:817;Parent=Msa0344070-mRNA-1
chr3_1 exon 2655003 2655075 2655003 ID=Msa0344070-mRNA-1:exon:816;Parent=Msa0344070-mRNA-1
chr3_1 exon 2655615 2656417 2655615 ID=Msa0344070-mRNA-1:exon:815;Parent=Msa0344070-mRNA-1
chr3_1 five_prime_UTR 2656271 2656417 2656271 ID=Msa0344070-mRNA-1:five_prime_utr;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2655615 2656270 2655615 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2655003 2655075 2655003 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2653844 2654877 2653844 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2653570 2653711 2653570 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2651931 2652225 2651931 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2651309 2651430 2651309 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2651007 2651126 2651007 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2650660 2650791 2650660 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2650430 2650552 2650430 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2649948 2650058 2649948 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2649721 2649867 2649721 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2649525 2649650 2649525 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
chr3_1 CDS 2649026 2649376 2649026 ID=Msa0344070-mRNA-1:cds;Parent=Msa0344070-mRNA-1
Gene Sequence

>Msa0344070

ATGATGATAGACCTCAAATACATATGGGTGCTAGTTTCAATCAACAGGTACATTCTCAACACAATACAAAATGAAAAAACAAGAAACACTCTAAGAACAAGATGCATATCAAACTTAAGGACTCAAAACCAAGAATTCTTTGAATTCTCTGACCAATCAGTCCTATCCAATCTTTATTATGGCATTGACAACATTGAAACTGCAATACAATCAAAACATCCGGAACAAAGATCTTTTAACCTTAAAAAGTCAGAAGAAATGCTTCAAGTTCCAGCAATGCTTGATGAAGATGAATTCACTGCTTCAATTCCAAATCATTACTTGGTTTGTTGCTCTTATTTTTATCTCTCAGTTGTTAGGAAGCTTCAAGGTGATGAATGGCAAGCTGCACTGCATTTTCTTCAAGCTGTTTTGGTTTCTCCGAAGCTTGTTTGGAATGAATTTGCACCTCAACTTTGTGAAAGTCTTTTCAAGAAGCATGAAAATAGAAGTTTGGAGTTTGTTAGTTCTTTGAATTCTGAGGAAGAAATCAATGAAGCAATTGTTAAGGAGAAGGCAAGGAGGTACAAGGAGTGTTTGGTGTATTATCAGGTCATGCTTTATGGAGAGATTCCATGGTGGAGCAGTTATTGCAGCAATAATTCAGCAAATTATATGGATGTATCCAATACCAGCTGTGTAACTTCTACTTCAGTTCAACATGAACAAAGATTGAAAACTTGCAATACATATGGGAAGGTTCACCCAATGGATCCTCAAGATGTGATGCAAGAACAGTTGAGAGCAAAAAGCATAATTAACCTTGATTCAAGCAGATTGACCAGGTCCACAAAAGATGTTGTTGCTTTATCGATTTCAAAACGGATAGAAAGAATGAGTATTGATTTAAATTGCCGTGTCGAGGATTTATTAATCGAAGAAGCATTGCAGCCACTAGAATTCCATCTCTTTGATCATGCAAGCAGAAATCATAGACTCGGCCAGAAAAACCGCGAAGAAAGTTCGAAGATGAAATTGCAAACATCATTAGAAAAATGTGGTGAAGAGTATATTGTAGACACTGCATCGATTTTCGAGAGTTTAATCAGTTCATCAGGAACTAATTATGGTTCATTAAAGGATGTGATTTTGGATGAATTACTAATAGTGATCTCAACTTCGAAAGAGGAAAAGGAACTAAGAACATCAGTATCAATTCTAACAACAATAATTTCAAGGAACAAGTCAATTATAGAAGATGTGAAGAAAAAGGGTTTAAGGTTATGTGATTTAGCAAGTGCTCTAAAACAAAATGTTCATGAAGCAGCAATTCTAATCTATTTAATAAATCCATCTCCTATAGATATAAATACACTGGAAATTTTGCCAATATTAGTAGAGATTGTATGCACTTCATCAAAAAGTTGTTACAAGAGTAATAAGCAAGAAGAATCACTTCTTATGACACCTCATGCAGCATCATTGATGATCATTGAAGAACTTGTAACTTCACTTGACTATGCTACAAATAACATGCATTTGGAAGTAATCAGTTCCCCTCATGTTCTCAGTGGACTTATAGAAGTTGCAAGAAATCATAATCTTGAAGAGTTTTTGTCTTTGACTACCATTCTTATAAAATGCATGCAGTTTGATTCACAGTGTAGAAAGTATGTGTCACAGTTCACTCCTCTTGCTCCATTTCTACACCTTCTAGAGACGGAAAATGTTCGTGCCAAATGCACGGCGCTCGAGTTTTTTCAGGAAATCCTATGCATACCAAGATCATCGGCTATTAATCTGCTGCAGAGGATAAAAAAAGAAAGCAGAATCAATATTATGCAGATACTAATGCATTGTGTCCATCAATTACAACCTGATCACCAGATTTTAGCTGCTAACCTATTGATTCAGTTAGACACATTGGATACAAGCATAGATGTATGGTGCAGCAAAATTTCCAAATGTATCATAAGTGTTGGAGATTCAACCTTCCATACTTTAGAGAGAGGACTGAGAAGCAAGATTAAAAGGGTTTCTAGAGACTGCCTTATAGCCATCTCATGGCTTGGATGTCAAATATCAAAAAATCCAGACAGCCTCAGTAATTCTGCATCTGAGATTATATTAAGAGGAATTGAGCAATTTCTGCATCCTGGAGTGGAATTGGATGAAAGACTTTTGGCATGTATGTGCATGTATAATTATGCCTCAGGGAAAGGAAAGCAAAAACTAATGCAATTCTCGGAAGGAGTAAAGGAATCATTAAGACGACTTTCAAACATAACCTGGATGGCTGAGGAGTTACATAGGGTAGCTGATTTCTTGCTTCCAAACACATCACGTATTTCTTGTGTTCATACACAAATCCTTGAGGCAGGTCGCAACTTTAGCACATCAGTTTGCTCCCTCATATACTACAAGGGACTGTTGTTTGGTGGATATTCAGATGGATCAATTAAGGTATGGGATATTAGGGGGCACTCAGCTAGTCTTGTATGGGACATTAAGGAGCACAAGAAGTCAGTGACATGCTTTTCAATTTATGAACCACTGGACAGTCTTTTAAGTGGATCCACTGATAAAACCATAAGGGTGTGGAAAATGAACCAAAGAAATCTTGAATGTCTTGAAGTAATAGTCATGAAGGAACCAGTTCATCATTTGCGCGCACATGGAGAGACAATTTTCGCAATTAGTGAAAAACAAGGAATAAAGCTTGTTAACAAATCGAGAGAAATAAGAGATATTTTCAAAGGTAAGCATGGGAAGTGCATGGCAGTGGATCATGGAAAGTTATATATTGGCTGCACAGACTCAAGCATACAGGAATATAACACAACACACAATAGGGAACTGGAAATCAAACCACCTACAAGAAGTTGGAGGAAGCAAAGTAAACCAATCAATTCAATTGTAGCCTATAGAGATTGGCTCTATAGTGCAAGTAAGCATGTTGAAGGAACAACATTCAAGGAATGGAAAAGAAGTGCAAAACCCAAAATTTCAATCCTTACTGACAAAGGAGATAATGTGGTAGCCATGGAAGTGGTAGAAGACTTCTTATACCTAATCTCTAGCTCATCAGCAAGCAGCATTCAGATCTGGTTGAGAGGAGTACCAAAAAAGTTGGGGAGATTATCAGCAGGGAGCAGGATAACAAGCATCTATGCTGCCAATGACATTATTTTTTGTGGTACTGAGAAGGGACTAATCAAGGTAAACAGAACCAACTCATCTGACCTCTTGTTATTTATTTCTCTAAAAATAATGTCTAGACATGATGACATTTCCCAAATTTTCAACAGGGCTGGATCCCTCTGTAAGAAGAACTTCAATTCATTGTGCATACATGTCTGTTCTTTCAAGTTTGAAGTTCAAACCTTTTGCCAGCCTAGTATTACAACAAAGATTAGCCAGTATGGAAAGCTTAGTCATTTATATATGATATGA

Protein sequence

>Msa0344070

MMIDLKYIWVLVSINRYILNTIQNEKTRNTLRTRCISNLRTQNQEFFEFSDQSVLSNLYYGIDNIETAIQSKHPEQRSFNLKKSEEMLQVPAMLDEDEFTASIPNHYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWNEFAPQLCESLFKKHENRSLEFVSSLNSEEEINEAIVKEKARRYKECLVYYQVMLYGEIPWWSSYCSNNSANYMDVSNTSCVTSTSVQHEQRLKTCNTYGKVHPMDPQDVMQEQLRAKSIINLDSSRLTRSTKDVVALSISKRIERMSIDLNCRVEDLLIEEALQPLEFHLFDHASRNHRLGQKNREESSKMKLQTSLEKCGEEYIVDTASIFESLISSSGTNYGSLKDVILDELLIVISTSKEEKELRTSVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDINTLEILPILVEIVCTSSKSCYKSNKQEESLLMTPHAASLMIIEELVTSLDYATNNMHLEVISSPHVLSGLIEVARNHNLEEFLSLTTILIKCMQFDSQCRKYVSQFTPLAPFLHLLETENVRAKCTALEFFQEILCIPRSSAINLLQRIKKESRINIMQILMHCVHQLQPDHQILAANLLIQLDTLDTSIDVWCSKISKCIISVGDSTFHTLERGLRSKIKRVSRDCLIAISWLGCQISKNPDSLSNSASEIILRGIEQFLHPGVELDERLLACMCMYNYASGKGKQKLMQFSEGVKESLRRLSNITWMAEELHRVADFLLPNTSRISCVHTQILEAGRNFSTSVCSLIYYKGLLFGGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSIYEPLDSLLSGSTDKTIRVWKMNQRNLECLEVIVMKEPVHHLRAHGETIFAISEKQGIKLVNKSREIRDIFKGKHGKCMAVDHGKLYIGCTDSSIQEYNTTHNRELEIKPPTRSWRKQSKPINSIVAYRDWLYSASKHVEGTTFKEWKRSAKPKISILTDKGDNVVAMEVVEDFLYLISSSSASSIQIWLRGVPKKLGRLSAGSRITSIYAANDIIFCGTEKGLIKVNRTNSSDLLLFISLKIMSRHDDISQIFNRAGSLCKKNFNSLCIHVCSFKFEVQTFCQPSITTKISQYGKLSHLYMI*