Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311030 | AES63546.2 | 92.166 | 217 | 6 | 1 | 1 | 206 | 62 | 278 | 9.01e-142 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311030 | sp|Q6EP49|MAD27_ORYSJ | 57.576 | 165 | 69 | 1 | 1 | 165 | 62 | 225 | 2.91e-57 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042950 | Msa0311030 | -0.800146 | 1.652691e-48 | -8.615850e-47 |
| Msa0075740 | Msa0311030 | 0.809301 | 2.024652e-50 | -8.615850e-47 |
| Msa0075750 | Msa0311030 | 0.817974 | 2.496503e-52 | -8.615850e-47 |
| Msa0136870 | Msa0311030 | -0.803050 | 4.193740e-49 | -8.615850e-47 |
| Msa0168310 | Msa0311030 | 0.845769 | 3.302460e-59 | -8.615850e-47 |
| Msa0178840 | Msa0311030 | -0.826169 | 3.143462e-54 | -8.615850e-47 |
| Msa0190290 | Msa0311030 | 0.888057 | 8.271233e-73 | -8.615850e-47 |
| Msa0311030 | Msa0471850 | 0.820022 | 8.543840e-53 | -8.615850e-47 |
| Msa0311030 | Msa0715330 | 0.818085 | 2.355802e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311030 | MtrunA17_Chr2g0279821 | 97.647 | 170 | 4 | 0 | 1 | 170 | 62 | 231 | 3.00e-120 | 340 |
| Msa0311030 | MtrunA17_Chr5g0411691 | 55.866 | 179 | 71 | 4 | 1 | 173 | 62 | 238 | 6.45e-58 | 182 |
| Msa0311030 | MtrunA17_Chr5g0427961 | 53.143 | 175 | 67 | 2 | 1 | 174 | 6 | 166 | 1.16e-56 | 177 |
| Msa0311030 | MtrunA17_Chr4g0049541 | 56.707 | 164 | 66 | 4 | 1 | 162 | 62 | 222 | 5.43e-52 | 167 |
| Msa0311030 | MtrunA17_Chr3g0077501 | 37.931 | 116 | 69 | 2 | 1 | 114 | 62 | 176 | 1.57e-15 | 72.4 |
| Msa0311030 | MtrunA17_Chr4g0061691 | 36.893 | 103 | 64 | 1 | 1 | 102 | 63 | 165 | 2.95e-14 | 68.9 |
| Msa0311030 | MtrunA17_Chr8g0380021 | 31.953 | 169 | 98 | 5 | 1 | 164 | 78 | 234 | 3.71e-14 | 68.9 |
| Msa0311030 | MtrunA17_Chr2g0308271 | 32.639 | 144 | 84 | 3 | 1 | 142 | 34 | 166 | 1.18e-13 | 67.0 |
| Msa0311030 | MtrunA17_Chr8g0366231 | 33.010 | 103 | 68 | 1 | 1 | 102 | 63 | 165 | 5.57e-13 | 65.5 |
| Msa0311030 | MtrunA17_Chr4g0061671 | 28.333 | 120 | 85 | 1 | 1 | 120 | 63 | 181 | 7.41e-13 | 64.3 |
| Msa0311030 | MtrunA17_Chr7g0220121 | 29.787 | 141 | 95 | 3 | 1 | 140 | 63 | 200 | 1.56e-12 | 64.7 |
| Msa0311030 | MtrunA17_Chr2g0284911 | 34.545 | 110 | 71 | 1 | 1 | 109 | 77 | 186 | 1.33e-11 | 62.0 |
| Msa0311030 | MtrunA17_Chr8g0351051 | 29.213 | 178 | 103 | 6 | 4 | 167 | 65 | 233 | 2.34e-11 | 61.2 |
| Msa0311030 | MtrunA17_Chr6g0455511 | 29.365 | 126 | 89 | 0 | 1 | 126 | 63 | 188 | 4.53e-11 | 60.5 |
| Msa0311030 | MtrunA17_Chr5g0420081 | 31.967 | 122 | 78 | 2 | 1 | 117 | 63 | 184 | 8.75e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311030 | AT4G37940.2 | 55.689 | 167 | 68 | 3 | 1 | 166 | 1 | 162 | 1.44e-56 | 177 |
| Msa0311030 | AT4G37940.1 | 55.689 | 167 | 68 | 3 | 1 | 166 | 62 | 223 | 2.72e-56 | 178 |
| Msa0311030 | AT2G22630.1 | 52.381 | 168 | 76 | 1 | 1 | 168 | 62 | 225 | 8.82e-53 | 169 |
| Msa0311030 | AT2G22630.2 | 52.381 | 168 | 76 | 1 | 1 | 168 | 62 | 225 | 8.82e-53 | 169 |
| Msa0311030 | AT3G57230.5 | 50.575 | 174 | 78 | 2 | 1 | 170 | 28 | 197 | 1.23e-50 | 163 |
| Msa0311030 | AT3G57230.3 | 50.575 | 174 | 78 | 2 | 1 | 170 | 28 | 197 | 1.23e-50 | 163 |
| Msa0311030 | AT3G57230.1 | 50.575 | 174 | 78 | 2 | 1 | 170 | 62 | 231 | 1.37e-50 | 164 |
| Msa0311030 | AT3G57230.4 | 50.575 | 174 | 78 | 2 | 1 | 170 | 62 | 231 | 1.37e-50 | 164 |
| Msa0311030 | AT2G14210.2 | 52.874 | 174 | 79 | 1 | 1 | 174 | 63 | 233 | 6.96e-49 | 159 |
| Msa0311030 | AT2G14210.1 | 52.571 | 175 | 80 | 1 | 1 | 175 | 63 | 234 | 9.26e-49 | 159 |
| Msa0311030 | AT4G37940.4 | 50.898 | 167 | 62 | 4 | 1 | 166 | 62 | 209 | 3.34e-47 | 154 |
| Msa0311030 | AT4G37940.3 | 66.279 | 86 | 29 | 0 | 1 | 86 | 62 | 147 | 1.24e-35 | 124 |
| Msa0311030 | AT3G57230.2 | 66.250 | 80 | 27 | 0 | 1 | 80 | 62 | 141 | 2.69e-30 | 109 |
| Msa0311030 | AT4G18960.4 | 37.500 | 112 | 69 | 1 | 1 | 111 | 64 | 175 | 5.59e-15 | 70.5 |
| Msa0311030 | AT4G09960.1 | 36.975 | 119 | 66 | 2 | 1 | 114 | 62 | 176 | 7.48e-15 | 70.9 |
| Msa0311030 | AT4G09960.6 | 36.975 | 119 | 66 | 2 | 1 | 114 | 63 | 177 | 7.67e-15 | 70.9 |
| Msa0311030 | AT4G09960.5 | 36.975 | 119 | 66 | 2 | 1 | 114 | 72 | 186 | 8.96e-15 | 70.9 |
| Msa0311030 | AT4G18960.3 | 35.000 | 120 | 77 | 1 | 1 | 119 | 64 | 183 | 9.27e-15 | 70.9 |
| Msa0311030 | AT4G18960.2 | 35.000 | 120 | 77 | 1 | 1 | 119 | 64 | 183 | 9.27e-15 | 70.9 |
| Msa0311030 | AT4G18960.1 | 35.000 | 120 | 77 | 1 | 1 | 119 | 78 | 197 | 1.12e-14 | 70.9 |
| Msa0311030 | AT1G69120.3 | 33.636 | 110 | 72 | 1 | 1 | 109 | 1 | 110 | 1.56e-14 | 69.3 |
| Msa0311030 | AT4G09960.3 | 36.975 | 119 | 66 | 2 | 1 | 114 | 88 | 202 | 1.60e-14 | 70.5 |
| Msa0311030 | AT1G69120.1 | 33.636 | 110 | 72 | 1 | 1 | 109 | 63 | 172 | 3.57e-14 | 69.7 |
| Msa0311030 | AT1G69120.2 | 33.636 | 110 | 72 | 1 | 1 | 109 | 63 | 172 | 4.23e-14 | 68.9 |
| Msa0311030 | AT4G09960.2 | 42.391 | 92 | 44 | 2 | 1 | 87 | 62 | 149 | 1.77e-13 | 67.0 |
| Msa0311030 | AT1G26310.1 | 33.036 | 112 | 72 | 1 | 1 | 109 | 63 | 174 | 3.84e-13 | 66.6 |
| Msa0311030 | AT3G58780.1 | 34.513 | 113 | 67 | 2 | 1 | 109 | 77 | 186 | 1.04e-12 | 65.5 |
| Msa0311030 | AT3G58780.5 | 34.513 | 113 | 67 | 2 | 1 | 109 | 83 | 192 | 1.05e-12 | 65.5 |
| Msa0311030 | AT4G09960.4 | 36.585 | 123 | 65 | 3 | 1 | 114 | 157 | 275 | 1.19e-12 | 65.9 |
| Msa0311030 | AT5G60910.2 | 32.727 | 110 | 73 | 1 | 1 | 109 | 1 | 110 | 1.62e-12 | 63.5 |
| Msa0311030 | AT3G58780.3 | 34.513 | 113 | 67 | 2 | 1 | 109 | 102 | 211 | 1.78e-12 | 65.1 |
| Msa0311030 | AT5G60910.1 | 32.727 | 110 | 73 | 1 | 1 | 109 | 63 | 172 | 2.89e-12 | 63.9 |
| Msa0311030 | AT3G58780.2 | 34.286 | 105 | 65 | 1 | 9 | 109 | 75 | 179 | 1.08e-11 | 62.4 |
| Msa0311030 | AT2G42830.1 | 32.743 | 113 | 69 | 2 | 1 | 109 | 77 | 186 | 2.96e-11 | 61.2 |
| Msa0311030 | AT2G45660.1 | 33.636 | 110 | 70 | 2 | 1 | 108 | 62 | 170 | 7.69e-11 | 59.7 |
| Msa0311030 | AT2G42830.2 | 29.661 | 118 | 76 | 2 | 1 | 114 | 77 | 191 | 8.67e-11 | 60.1 |
Find 33 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGGGTGAAGGACTTTC+TGG | 0.186396 | 2_4:+5883893 | Msa0311030:CDS |
| AGTACTGCAGTTGTTGTCTC+AGG | 0.354912 | 2_4:-5883642 | None:intergenic |
| CTTTCATGCACTATCAGAAA+TGG | 0.360004 | 2_4:+5884556 | Msa0311030:CDS |
| TATTAAAGAACTACAGAATC+TGG | 0.361380 | 2_4:+5883922 | Msa0311030:CDS |
| CACTGTATTGAGGCTGTGGC+TGG | 0.370216 | 2_4:-5884615 | None:intergenic |
| GAAGGGTGTTCGAATGAAAA+AGG | 0.375892 | 2_4:+5883967 | Msa0311030:CDS |
| GAGGCTGTGGCTGGCTTAGC+TGG | 0.381070 | 2_4:-5884606 | None:intergenic |
| TGGTAAAACCAGGCAATTGA+TGG | 0.388570 | 2_4:+5883877 | Msa0311030:intron |
| GAATCCAGCTTCAGAAGTTA+AGG | 0.399355 | 2_4:+5877311 | Msa0311030:CDS |
| GGTGAAGGACTTTCTGGGTT+GGG | 0.400040 | 2_4:+5883899 | Msa0311030:CDS |
| TCTGATAGTGCATGAAAGAT+TGG | 0.418090 | 2_4:-5884551 | None:intergenic |
| ATTACCTTAACTTCTGAAGC+TGG | 0.442043 | 2_4:-5877315 | None:intergenic |
| ACAGAATCTGGAAAACCAAC+TGG | 0.453238 | 2_4:+5883934 | Msa0311030:CDS |
| TGGCTTAGCTGGAGACTGAT+AGG | 0.456839 | 2_4:-5884595 | None:intergenic |
| TGATGGGTGAAGGACTTTCT+GGG | 0.476172 | 2_4:+5883894 | Msa0311030:CDS |
| GCCGCTGGTTCACTGTATTG+AGG | 0.490319 | 2_4:-5884625 | None:intergenic |
| AATATTAGGTTTATGAAGCA+AGG | 0.509301 | 2_4:+5884503 | Msa0311030:intron |
| AAATGCAGAGCTACTGAAGA+AGG | 0.518281 | 2_4:+5884269 | Msa0311030:CDS |
| GGGTGAAGGACTTTCTGGGT+TGG | 0.523473 | 2_4:+5883898 | Msa0311030:CDS |
| AATTTCATGACTTTGGCCGC+TGG | 0.524492 | 2_4:-5884640 | None:intergenic |
| GCGCTACAACAAACAGAAAG+AGG | 0.534165 | 2_4:+5877272 | Msa0311030:CDS |
| GATTAAAGAACTGCACCAAA+AGG | 0.544459 | 2_4:+5884102 | Msa0311030:CDS |
| GGTTCACTGTATTGAGGCTG+TGG | 0.560349 | 2_4:-5884619 | None:intergenic |
| GGTAAAACCAGGCAATTGAT+GGG | 0.560936 | 2_4:+5883878 | Msa0311030:intron |
| CCTTCAGACTAATCTCCAGT+TGG | 0.563776 | 2_4:-5883949 | None:intergenic |
| ACCAGGCAATTGATGGGTGA+AGG | 0.567810 | 2_4:+5883884 | Msa0311030:intron |
| GTACTGCAGTTGTTGTCTCA+GGG | 0.569367 | 2_4:-5883641 | None:intergenic |
| CCAACTGGAGATTAGTCTGA+AGG | 0.574247 | 2_4:+5883949 | Msa0311030:CDS |
| CAACTGGAGATTAGTCTGAA+GGG | 0.603654 | 2_4:+5883950 | Msa0311030:CDS |
| AGTACTTGCAAGAAAGCCAT+AGG | 0.622373 | 2_4:+5883659 | Msa0311030:CDS |
| TATGATCGTGCTGCTATGTG+TGG | 0.638655 | 2_4:+5884843 | Msa0311030:CDS |
| ATGATCGTGCTGCTATGTGT+GGG | 0.675898 | 2_4:+5884844 | Msa0311030:CDS |
| GCCTCAATACAGTGAACCAG+CGG | 0.680828 | 2_4:+5884624 | Msa0311030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAGATATATTTTTTAAAA+AGG | + | chr2_4:5878582-5878601 | Msa0311030:intron | 10.0% |
| !!! | AGAGATATATTTTTTAAAAA+GGG | + | chr2_4:5878583-5878602 | Msa0311030:intron | 10.0% |
| !!! | AAAAAATTAAATCAACTTTT+AGG | + | chr2_4:5880081-5880100 | Msa0311030:intron | 10.0% |
| !! | CAATAAATTATAAACAAATT+AGG | + | chr2_4:5881517-5881536 | Msa0311030:intron | 10.0% |
| !!! | CAAATAATTTTAAAGTTTAA+AGG | - | chr2_4:5881604-5881623 | None:intergenic | 10.0% |
| !!! | TAAACTTTAAAATTATTTGA+AGG | + | chr2_4:5881605-5881624 | Msa0311030:intron | 10.0% |
| !! | TTACAAAAAAAAAATAAAGT+AGG | - | chr2_4:5881982-5882001 | None:intergenic | 10.0% |
| !!! | TAATTTCAACTTATTTTTTT+TGG | + | chr2_4:5882307-5882326 | Msa0311030:intron | 10.0% |
| !! | AGAATATAAATGCAAATTAA+TGG | - | chr2_4:5877403-5877422 | None:intergenic | 15.0% |
| !! | TAGTTTACTTAATATTAGAA+TGG | - | chr2_4:5877692-5877711 | None:intergenic | 15.0% |
| !!! | ATTTCATGGTTTTTTTTAAA+GGG | + | chr2_4:5877843-5877862 | Msa0311030:intron | 15.0% |
| !!! | GAGATATATTTTTTAAAAAG+GGG | + | chr2_4:5878584-5878603 | Msa0311030:intron | 15.0% |
| !! | TAGATCAAATCAAATTAATA+AGG | + | chr2_4:5879226-5879245 | Msa0311030:intron | 15.0% |
| !! | AGATCAAATCAAATTAATAA+GGG | + | chr2_4:5879227-5879246 | Msa0311030:intron | 15.0% |
| !! | TTAGTACAAAAAATTGATTA+GGG | - | chr2_4:5880742-5880761 | None:intergenic | 15.0% |
| !! | ATTAGTACAAAAAATTGATT+AGG | - | chr2_4:5880743-5880762 | None:intergenic | 15.0% |
| !!! | TTTTTTGTACTAATTGAATT+TGG | + | chr2_4:5880749-5880768 | Msa0311030:intron | 15.0% |
| !!! | TTTCAATTTATCTGTTTTAA+AGG | - | chr2_4:5881549-5881568 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTGTAAATCCA+TGG | + | chr2_4:5881987-5882006 | Msa0311030:intron | 15.0% |
| !!! | AATAAATTTGAGATTTAAGT+CGG | - | chr2_4:5882368-5882387 | None:intergenic | 15.0% |
| !! | TTAAAAATGTAATAATCATC+TGG | + | chr2_4:5882389-5882408 | Msa0311030:intron | 15.0% |
| !!! | AAACTATAAATTTATGGTTT+TGG | - | chr2_4:5882419-5882438 | None:intergenic | 15.0% |
| !! | CTACAAAAACTATAAATTTA+TGG | - | chr2_4:5882425-5882444 | None:intergenic | 15.0% |
| !! | TACAAGTAATAAAATAATCT+GGG | + | chr2_4:5883445-5883464 | Msa0311030:intron | 15.0% |
| !!! | ACATTAATTTATTTTACCTA+TGG | - | chr2_4:5883678-5883697 | None:intergenic | 15.0% |
| !!! | TTATTTATTTATTTTTTGGG+TGG | + | chr2_4:5883780-5883799 | Msa0311030:intron | 15.0% |
| !!! | TATTTATTTATTTTTTGGGT+GGG | + | chr2_4:5883781-5883800 | Msa0311030:intron | 15.0% |
| !! | TTATACCATTAACACATTTA+TGG | + | chr2_4:5877494-5877513 | Msa0311030:intron | 20.0% |
| !! | TATACCATTAACACATTTAT+GGG | + | chr2_4:5877495-5877514 | Msa0311030:intron | 20.0% |
| !! | AAAGGATATAGATAAATTGT+TGG | - | chr2_4:5877583-5877602 | None:intergenic | 20.0% |
| !! | AATAATGTGAATTCTTAAGA+TGG | - | chr2_4:5877667-5877686 | None:intergenic | 20.0% |
| !! | TTAGTTACAATATGATTTCA+TGG | + | chr2_4:5877829-5877848 | Msa0311030:intron | 20.0% |
| !!! | GATTTCATGGTTTTTTTTAA+AGG | + | chr2_4:5877842-5877861 | Msa0311030:intron | 20.0% |
| !! | TATGTATAACTTAAATTGGA+TGG | - | chr2_4:5878136-5878155 | None:intergenic | 20.0% |
| !! | AGAGTATGTATAACTTAAAT+TGG | - | chr2_4:5878140-5878159 | None:intergenic | 20.0% |
| !! | CTTTATGTCATATGTATATA+AGG | + | chr2_4:5878168-5878187 | Msa0311030:intron | 20.0% |
| !! | TTTCTTTCGTAAAATCAAAT+AGG | - | chr2_4:5878426-5878445 | None:intergenic | 20.0% |
| !!! | AATGATTTTAATCATGAGAA+GGG | - | chr2_4:5878629-5878648 | None:intergenic | 20.0% |
| !!! | TAATGATTTTAATCATGAGA+AGG | - | chr2_4:5878630-5878649 | None:intergenic | 20.0% |
| !! | AAAAAAATTGATTGTTAGCT+TGG | + | chr2_4:5879176-5879195 | Msa0311030:intron | 20.0% |
| !!! | TAATTTTCTCAATTGTAGAA+AGG | + | chr2_4:5879299-5879318 | Msa0311030:intron | 20.0% |
| !!! | AATTTTCTCAATTGTAGAAA+GGG | + | chr2_4:5879300-5879319 | Msa0311030:intron | 20.0% |
| !!! | AACACTTTTCATAAGTTTTT+CGG | + | chr2_4:5879423-5879442 | Msa0311030:intron | 20.0% |
| !!! | ATAGCTTGTTAAAAATAGTT+TGG | + | chr2_4:5879467-5879486 | Msa0311030:intron | 20.0% |
| !!! | AAACATCATATTCTATTTCT+GGG | + | chr2_4:5879636-5879655 | Msa0311030:intron | 20.0% |
| !!! | TAAATTGGAATTTCTGATTT+TGG | + | chr2_4:5879659-5879678 | Msa0311030:intron | 20.0% |
| !!! | TTTCTGATTTTGGAAATATT+AGG | + | chr2_4:5879669-5879688 | Msa0311030:intron | 20.0% |
| !!! | AAGAAATGTTGATTATCTTA+AGG | + | chr2_4:5879892-5879911 | Msa0311030:intron | 20.0% |
| !! | AAAAAAAACTCAAAACAACT+TGG | + | chr2_4:5880127-5880146 | Msa0311030:intron | 20.0% |
| !!! | AGATTTTTGGTTTTTCTTTT+GGG | - | chr2_4:5880205-5880224 | None:intergenic | 20.0% |
| !! | AAAACTAACTCTAATAAGAT+GGG | - | chr2_4:5880369-5880388 | None:intergenic | 20.0% |
| !! | GATAAATAGTTTAAATTGAG+TGG | + | chr2_4:5880577-5880596 | Msa0311030:intron | 20.0% |
| !!! | TACATAATAACTTGTTTCAT+AGG | + | chr2_4:5880793-5880812 | Msa0311030:intron | 20.0% |
| !!! | ACATAATAACTTGTTTCATA+GGG | + | chr2_4:5880794-5880813 | Msa0311030:intron | 20.0% |
| !! | CAAATAGAGTAAAACTATTT+AGG | + | chr2_4:5880885-5880904 | Msa0311030:intron | 20.0% |
| !! | TATGTTCAAATCGATTAATA+AGG | + | chr2_4:5880951-5880970 | Msa0311030:intron | 20.0% |
| !! | ATGTTCAAATCGATTAATAA+GGG | + | chr2_4:5880952-5880971 | Msa0311030:intron | 20.0% |
| !!! | TTTGAACTTGATTTTTCTTT+TGG | - | chr2_4:5881029-5881048 | None:intergenic | 20.0% |
| !!! | TATGTTTTTACTTTATCTCT+CGG | + | chr2_4:5881134-5881153 | Msa0311030:intron | 20.0% |
| !!! | ATCAAATGGTATTTTTTTCA+TGG | - | chr2_4:5881203-5881222 | None:intergenic | 20.0% |
| !! | TGTAACAATGTAAAAATGTT+TGG | - | chr2_4:5881359-5881378 | None:intergenic | 20.0% |
| !!! | TATTAAGGTTTTAAATTGCA+GGG | - | chr2_4:5881441-5881460 | None:intergenic | 20.0% |
| !!! | TTTAAAACCTTAATAGTTCA+TGG | + | chr2_4:5881446-5881465 | Msa0311030:intron | 20.0% |
| !! | ATTATAAACAAATTAGGTTC+TGG | + | chr2_4:5881523-5881542 | Msa0311030:intron | 20.0% |
| !! | ATACCATTAGATCTAATTAA+TGG | - | chr2_4:5881869-5881888 | None:intergenic | 20.0% |
| !! | CTATTTGATTGATAAACTAT+TGG | - | chr2_4:5882017-5882036 | None:intergenic | 20.0% |
| !! | AATTTCAACTTCATACTTAA+AGG | + | chr2_4:5882340-5882359 | Msa0311030:intron | 20.0% |
| !!! | GTAATCTAGTTTCAAATATA+TGG | + | chr2_4:5882516-5882535 | Msa0311030:intron | 20.0% |
| !!! | AAATGAATTTGGATTTTCTT+TGG | + | chr2_4:5882643-5882662 | Msa0311030:intron | 20.0% |
| !!! | CTAATTCATTTTAATCCTTA+GGG | + | chr2_4:5883368-5883387 | Msa0311030:intron | 20.0% |
| !! | CTACAAGTAATAAAATAATC+TGG | + | chr2_4:5883444-5883463 | Msa0311030:intron | 20.0% |
| !! | TTTAACACATTATTGCATTA+TGG | - | chr2_4:5883478-5883497 | None:intergenic | 20.0% |
| !! | ATAATGTGTTAAAATTCTGT+TGG | + | chr2_4:5883485-5883504 | Msa0311030:intron | 20.0% |
| !!! | ATTTATTTATTTTTTGGGTG+GGG | + | chr2_4:5883782-5883801 | Msa0311030:intron | 20.0% |
| !!! | TGTATTTCGTACTTTATTTT+TGG | + | chr2_4:5883857-5883876 | Msa0311030:intron | 20.0% |
| !! | AATATTCATATCTTCTGTTT+AGG | - | chr2_4:5884489-5884508 | None:intergenic | 20.0% |
| !! | AAACAGAAGATATGAATATT+AGG | + | chr2_4:5884489-5884508 | Msa0311030:intron | 20.0% |
| !! | CTGAATAAATTAGAAAGAAA+AGG | - | chr2_4:5884715-5884734 | None:intergenic | 20.0% |
| ! | ATACCATTAACACATTTATG+GGG | + | chr2_4:5877496-5877515 | Msa0311030:intron | 25.0% |
| ! | AAGAAAAACACAACAACAAA+AGG | - | chr2_4:5877601-5877620 | None:intergenic | 25.0% |
| ! | AGTAAACTAATGATACAACT+TGG | + | chr2_4:5877703-5877722 | Msa0311030:intron | 25.0% |
| !! | TGGTAGAACAATTTTGTATT+TGG | + | chr2_4:5877723-5877742 | Msa0311030:intron | 25.0% |
| !! | GGTAGAACAATTTTGTATTT+GGG | + | chr2_4:5877724-5877743 | Msa0311030:intron | 25.0% |
| !! | AATTTTGTATTTGGGAGTTT+AGG | + | chr2_4:5877732-5877751 | Msa0311030:intron | 25.0% |
| !! | ATTTTGTATTTGGGAGTTTA+GGG | + | chr2_4:5877733-5877752 | Msa0311030:intron | 25.0% |
| ! | AATTCCTTGTATAAATACCA+CGG | - | chr2_4:5877872-5877891 | None:intergenic | 25.0% |
| !!! | AAGTTAGTTAGCTTGTTAAT+TGG | - | chr2_4:5877957-5877976 | None:intergenic | 25.0% |
| ! | AATAGGTATATTGGTAGAAT+GGG | - | chr2_4:5878044-5878063 | None:intergenic | 25.0% |
| ! | AAATAGGTATATTGGTAGAA+TGG | - | chr2_4:5878045-5878064 | None:intergenic | 25.0% |
| ! | AGTAGAAGAAATAGGTATAT+TGG | - | chr2_4:5878053-5878072 | None:intergenic | 25.0% |
| ! | ATGAATTTGACATATTAGGA+AGG | - | chr2_4:5878099-5878118 | None:intergenic | 25.0% |
| ! | CATGATGAATTTGACATATT+AGG | - | chr2_4:5878103-5878122 | None:intergenic | 25.0% |
| !! | AAAACTAGACTTTTAGCAAA+GGG | + | chr2_4:5878229-5878248 | Msa0311030:intron | 25.0% |
| !!! | AAATTAGTTTTAACTCTCGT+TGG | + | chr2_4:5878325-5878344 | Msa0311030:intron | 25.0% |
| !! | ATTTTACGAAAGAAACACTA+AGG | + | chr2_4:5878431-5878450 | Msa0311030:intron | 25.0% |
| ! | TTGTTATGCAAACTATTCTA+TGG | - | chr2_4:5878499-5878518 | None:intergenic | 25.0% |
| !! | AATAGTTTGCATAACAAACA+AGG | + | chr2_4:5878502-5878521 | Msa0311030:intron | 25.0% |
| !!! | ATGATTTTAATCATGAGAAG+GGG | - | chr2_4:5878628-5878647 | None:intergenic | 25.0% |
| !! | TCTTTTATACTACAATAGCA+AGG | + | chr2_4:5878711-5878730 | Msa0311030:intron | 25.0% |
| ! | ATTTGTAATAGCTATAGCAA+TGG | + | chr2_4:5878886-5878905 | Msa0311030:intron | 25.0% |
| !!! | TGCTAGTAATGTTACTTTTT+TGG | - | chr2_4:5878930-5878949 | None:intergenic | 25.0% |
| ! | TTATCAATCAAACAGACAAA+TGG | - | chr2_4:5878993-5879012 | None:intergenic | 25.0% |
| !!! | CAACATTTCCTTTTTTTATC+AGG | + | chr2_4:5879075-5879094 | Msa0311030:intron | 25.0% |
| ! | TACTCATTCCTGATAAAAAA+AGG | - | chr2_4:5879086-5879105 | None:intergenic | 25.0% |
| !! | TGTCATGGATATGATATTTT+TGG | - | chr2_4:5879129-5879148 | None:intergenic | 25.0% |
| !! | TCATTTTGAATAGTTAGCAT+TGG | + | chr2_4:5879268-5879287 | Msa0311030:intron | 25.0% |
| !! | CATTTTGAATAGTTAGCATT+GGG | + | chr2_4:5879269-5879288 | Msa0311030:intron | 25.0% |
| !! | ATTTTGAATAGTTAGCATTG+GGG | + | chr2_4:5879270-5879289 | Msa0311030:intron | 25.0% |
| !! | TTTGCTATGTGAATGAATAA+AGG | - | chr2_4:5879586-5879605 | None:intergenic | 25.0% |
| ! | GAAACATCATATTCTATTTC+TGG | + | chr2_4:5879635-5879654 | Msa0311030:intron | 25.0% |
| !!! | TATTCTATTTCTGGGTAAAT+TGG | + | chr2_4:5879644-5879663 | Msa0311030:intron | 25.0% |
| ! | ATTAGAATGAGGAAACAAAA+TGG | + | chr2_4:5879763-5879782 | Msa0311030:intron | 25.0% |
| ! | AAGATAATCAACATTTCTTC+AGG | - | chr2_4:5879891-5879910 | None:intergenic | 25.0% |
| !! | TTGATTATCTTAAGGTCTTT+TGG | + | chr2_4:5879900-5879919 | Msa0311030:intron | 25.0% |
| !! | TGATTATCTTAAGGTCTTTT+GGG | + | chr2_4:5879901-5879920 | Msa0311030:intron | 25.0% |
| ! | AGTTAGTTAGTTAGTTAAAG+AGG | + | chr2_4:5879982-5880001 | Msa0311030:intron | 25.0% |
| !!! | TTTTTTTCTCCTTCTTTCTT+TGG | - | chr2_4:5880107-5880126 | None:intergenic | 25.0% |
| !!! | GAGATTTTTGGTTTTTCTTT+TGG | - | chr2_4:5880206-5880225 | None:intergenic | 25.0% |
| !! | ACTTTTAGTCATGAGATTTT+TGG | - | chr2_4:5880218-5880237 | None:intergenic | 25.0% |
| ! | AAATCTCATGACTAAAAGTT+TGG | + | chr2_4:5880219-5880238 | Msa0311030:intron | 25.0% |
| ! | TAAAAATGCGAGATTCAATT+CGG | - | chr2_4:5880255-5880274 | None:intergenic | 25.0% |
| ! | AAACTAACTCTAATAAGATG+GGG | - | chr2_4:5880368-5880387 | None:intergenic | 25.0% |
| ! | GAAAACTAACTCTAATAAGA+TGG | - | chr2_4:5880370-5880389 | None:intergenic | 25.0% |
| ! | GTAACAAAAAACAAAACACT+AGG | - | chr2_4:5880438-5880457 | None:intergenic | 25.0% |
| ! | CATTCGACAATCATAATATT+TGG | + | chr2_4:5880624-5880643 | Msa0311030:intron | 25.0% |
| ! | TATTATGTAGAACAATTGAG+AGG | - | chr2_4:5880782-5880801 | None:intergenic | 25.0% |
| ! | TTCATAGGGAAAACAAAAAT+AGG | + | chr2_4:5880808-5880827 | Msa0311030:intron | 25.0% |
| !!! | TTTAGGACTTGTTCATATTT+TGG | + | chr2_4:5880902-5880921 | Msa0311030:intron | 25.0% |
| !!! | TTAGGACTTGTTCATATTTT+GGG | + | chr2_4:5880903-5880922 | Msa0311030:intron | 25.0% |
| ! | TAATAAGGGTAGGAATAATA+TGG | + | chr2_4:5880966-5880985 | Msa0311030:intron | 25.0% |
| ! | AGACTTCGTATAAATAAATC+TGG | + | chr2_4:5880997-5881016 | Msa0311030:intron | 25.0% |
| ! | AACATAATGCAAATATGAGA+GGG | - | chr2_4:5881120-5881139 | None:intergenic | 25.0% |
| ! | AAACATAATGCAAATATGAG+AGG | - | chr2_4:5881121-5881140 | None:intergenic | 25.0% |
| ! | ATACCATTTGATTGAATCAA+TGG | + | chr2_4:5881211-5881230 | Msa0311030:intron | 25.0% |
| !!! | ATTAAGGTTTTAAATTGCAG+GGG | - | chr2_4:5881440-5881459 | None:intergenic | 25.0% |
| !!! | CTATTAAGGTTTTAAATTGC+AGG | - | chr2_4:5881442-5881461 | None:intergenic | 25.0% |
| !! | AAATTGATCTGCTTTCTTTT+TGG | + | chr2_4:5881637-5881656 | Msa0311030:intron | 25.0% |
| !! | TCTAATTTTCGACAAACATT+AGG | + | chr2_4:5881753-5881772 | Msa0311030:intron | 25.0% |
| ! | AGACCATTAATTAGATCTAA+TGG | + | chr2_4:5881863-5881882 | Msa0311030:intron | 25.0% |
| !!! | ATCTAATGGTATTTTTGTCA+TGG | + | chr2_4:5881877-5881896 | Msa0311030:intron | 25.0% |
| !! | ACCTTATCTCTCTATTATTT+TGG | + | chr2_4:5881942-5881961 | Msa0311030:intron | 25.0% |
| ! | ACCAAAATAATAGAGAGATA+AGG | - | chr2_4:5881946-5881965 | None:intergenic | 25.0% |
| ! | AACCAATCCATATATTCTAA+GGG | - | chr2_4:5882232-5882251 | None:intergenic | 25.0% |
| !! | AAATTAGTTTACATTGTCAC+TGG | - | chr2_4:5882293-5882312 | None:intergenic | 25.0% |
| ! | CTAGTTTCAAATATATGGAA+TGG | + | chr2_4:5882521-5882540 | Msa0311030:intron | 25.0% |
| !! | TAATTTGAGATTTGATAGAG+AGG | - | chr2_4:5882903-5882922 | None:intergenic | 25.0% |
| ! | AAATCTCAAATTAAACCACA+TGG | + | chr2_4:5882910-5882929 | Msa0311030:intron | 25.0% |
| ! | TAGAGATATAAAACCATTCA+TGG | + | chr2_4:5882981-5883000 | Msa0311030:intron | 25.0% |
| ! | AGCTTCATATTTATGTTTCA+AGG | - | chr2_4:5883342-5883361 | None:intergenic | 25.0% |
| ! | CCTAAGGATTAAAATGAATT+AGG | - | chr2_4:5883370-5883389 | None:intergenic | 25.0% |
| !!! | CCTAATTCATTTTAATCCTT+AGG | + | chr2_4:5883367-5883386 | Msa0311030:intron | 25.0% |
| !! | CATTACAACTATTGCATTTT+AGG | + | chr2_4:5883538-5883557 | Msa0311030:intron | 25.0% |
| ! | ATGTTTAGCAGTTATTACTA+AGG | - | chr2_4:5883571-5883590 | None:intergenic | 25.0% |
| !! | ATGTATTCTTTTACCAAAAG+AGG | - | chr2_4:5883758-5883777 | None:intergenic | 25.0% |
| ! | TCAATGTGAAATTGTAAAGA+TGG | - | chr2_4:5883835-5883854 | None:intergenic | 25.0% |
| !!! | ACTTTATTTTTGGTAAAACC+AGG | + | chr2_4:5883867-5883886 | Msa0311030:intron | 25.0% |
| ! | TATTAAAGAACTACAGAATC+TGG | + | chr2_4:5883922-5883941 | Msa0311030:CDS | 25.0% |
| ! | TACACATCAATAACAAAGAA+AGG | + | chr2_4:5884340-5884359 | Msa0311030:intron | 25.0% |
| ! | AAAGTAAGTTCTACTTGATA+TGG | - | chr2_4:5884402-5884421 | None:intergenic | 25.0% |
| !!! | AGTAGAACTTACTTTTCATT+AGG | + | chr2_4:5884407-5884426 | Msa0311030:intron | 25.0% |
| ! | CTATTTATCTAGAAGCTAAA+AGG | + | chr2_4:5884440-5884459 | Msa0311030:intron | 25.0% |
| ! | AATATTAGGTTTATGAAGCA+AGG | + | chr2_4:5884503-5884522 | Msa0311030:intron | 25.0% |
| CATCACCATGTTGTAATTAT+GGG | + | chr2_4:5877453-5877472 | Msa0311030:intron | 30.0% | |
| TACCATTAACACATTTATGG+GGG | + | chr2_4:5877497-5877516 | Msa0311030:intron | 30.0% | |
| ! | CTTGACAAGAACTTTTCTTT+TGG | + | chr2_4:5877618-5877637 | Msa0311030:intron | 30.0% |
| !!! | TTTTTTTTAAAGGGAATCCG+TGG | + | chr2_4:5877852-5877871 | Msa0311030:intron | 30.0% |
| ATAGGTATATTGGTAGAATG+GGG | - | chr2_4:5878043-5878062 | None:intergenic | 30.0% | |
| ! | CAAAACTAGACTTTTAGCAA+AGG | + | chr2_4:5878228-5878247 | Msa0311030:intron | 30.0% |
| !! | ACTAGAATCTTGGCTTTTAT+CGG | - | chr2_4:5878460-5878479 | None:intergenic | 30.0% |
| TGCATAACAAACAAGGATTA+TGG | + | chr2_4:5878509-5878528 | Msa0311030:intron | 30.0% | |
| AAAAGGGGTAACAAAAAGTA+AGG | + | chr2_4:5878599-5878618 | Msa0311030:intron | 30.0% | |
| TCATTACACCATCAAATTAG+AGG | + | chr2_4:5878644-5878663 | Msa0311030:intron | 30.0% | |
| CATTACACCATCAAATTAGA+GGG | + | chr2_4:5878645-5878664 | Msa0311030:intron | 30.0% | |
| TGTATAAGATTCCCTTATCA+TGG | + | chr2_4:5879045-5879064 | Msa0311030:intron | 30.0% | |
| AAGGAATGTGAATTATGTCA+TGG | - | chr2_4:5879144-5879163 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTCCTAACATGCGA+AGG | - | chr2_4:5879163-5879182 | None:intergenic | 30.0% |
| TTCAAAATGACCTGTTTACT+CGG | - | chr2_4:5879258-5879277 | None:intergenic | 30.0% | |
| GGAAACACTTATGACATATT+TGG | + | chr2_4:5879321-5879340 | Msa0311030:intron | 30.0% | |
| AACAATTGTGAGAGATTGTT+TGG | + | chr2_4:5879375-5879394 | Msa0311030:intron | 30.0% | |
| TGAATGAATAAAGGACTGTT+TGG | - | chr2_4:5879577-5879596 | None:intergenic | 30.0% | |
| ! | TTTTTCCCTTGTCTGTTTTA+TGG | + | chr2_4:5879610-5879629 | Msa0311030:intron | 30.0% |
| TTCAACCATAAAACAGACAA+GGG | - | chr2_4:5879618-5879637 | None:intergenic | 30.0% | |
| TTTCAACCATAAAACAGACA+AGG | - | chr2_4:5879619-5879638 | None:intergenic | 30.0% | |
| ! | ATTCTAATTTGTGTCGTTGT+TGG | - | chr2_4:5879751-5879770 | None:intergenic | 30.0% |
| ! | GATTATCTTAAGGTCTTTTG+GGG | + | chr2_4:5879902-5879921 | Msa0311030:intron | 30.0% |
| ! | ATTATCTTAAGGTCTTTTGG+GGG | + | chr2_4:5879903-5879922 | Msa0311030:intron | 30.0% |
| !! | GAGGTGTTATTAAGAAAGAA+GGG | + | chr2_4:5879926-5879945 | Msa0311030:intron | 30.0% |
| AAAACACTAGGAAAAGATAG+AGG | - | chr2_4:5880426-5880445 | None:intergenic | 30.0% | |
| CTAAACAATGTGAGAACAAA+GGG | - | chr2_4:5880492-5880511 | None:intergenic | 30.0% | |
| ACTAAACAATGTGAGAACAA+AGG | - | chr2_4:5880493-5880512 | None:intergenic | 30.0% | |
| TGTTCTCACATTGTTTAGTT+TGG | + | chr2_4:5880494-5880513 | Msa0311030:intron | 30.0% | |
| ! | GTTCTCACATTGTTTAGTTT+GGG | + | chr2_4:5880495-5880514 | Msa0311030:intron | 30.0% |
| TTCTTTGTTCTCTTCTATGT+GGG | - | chr2_4:5880538-5880557 | None:intergenic | 30.0% | |
| TTTCTTTGTTCTCTTCTATG+TGG | - | chr2_4:5880539-5880558 | None:intergenic | 30.0% | |
| TTAAATTGAGTGGCATGATT+TGG | + | chr2_4:5880587-5880606 | Msa0311030:intron | 30.0% | |
| TCAAATCGATTAATAAGGGT+AGG | + | chr2_4:5880956-5880975 | Msa0311030:intron | 30.0% | |
| !! | CAACCATTGATTCAATCAAA+TGG | - | chr2_4:5881217-5881236 | None:intergenic | 30.0% |
| AAGTTCACCATGAACTATTA+AGG | - | chr2_4:5881456-5881475 | None:intergenic | 30.0% | |
| TGGTGAACTTTAATGCTTAA+TGG | + | chr2_4:5881466-5881485 | Msa0311030:intron | 30.0% | |
| ATGCTTAATGGCCATAAATT+AGG | + | chr2_4:5881478-5881497 | Msa0311030:intron | 30.0% | |
| TAAAGCCAGAACCTAATTTA+TGG | - | chr2_4:5881492-5881511 | None:intergenic | 30.0% | |
| GACAAACATTAGGAAATTGA+GGG | + | chr2_4:5881763-5881782 | Msa0311030:intron | 30.0% | |
| ACAAACATTAGGAAATTGAG+GGG | + | chr2_4:5881764-5881783 | Msa0311030:intron | 30.0% | |
| !! | CACATCTACTTGTTGTTATA+TGG | + | chr2_4:5882051-5882070 | Msa0311030:intron | 30.0% |
| !! | CTACTTGTTGTTATATGGTT+TGG | + | chr2_4:5882056-5882075 | Msa0311030:intron | 30.0% |
| CAACCAATCCATATATTCTA+AGG | - | chr2_4:5882233-5882252 | None:intergenic | 30.0% | |
| !! | CTTAGAATATATGGATTGGT+TGG | + | chr2_4:5882231-5882250 | Msa0311030:intron | 30.0% |
| CATCATCGAAGATGAAAATT+AGG | + | chr2_4:5882267-5882286 | Msa0311030:intron | 30.0% | |
| !!! | TCGACATTTTTTATGATGTG+AGG | + | chr2_4:5882494-5882513 | Msa0311030:intron | 30.0% |
| ! | TATCTACTAGTACTGAAATC+TGG | - | chr2_4:5882557-5882576 | None:intergenic | 30.0% |
| TGGCTAATTGATTGAATTCT+AGG | - | chr2_4:5882589-5882608 | None:intergenic | 30.0% | |
| TCCATGGAATCAAATGAATT+TGG | + | chr2_4:5882632-5882651 | Msa0311030:intron | 30.0% | |
| TCCAAATTCATTTGATTCCA+TGG | - | chr2_4:5882636-5882655 | None:intergenic | 30.0% | |
| !! | TTTGGATTTTCTTTGGTGAT+AGG | + | chr2_4:5882650-5882669 | Msa0311030:intron | 30.0% |
| AGATGTAAGGGTTTATATAC+AGG | + | chr2_4:5882695-5882714 | Msa0311030:intron | 30.0% | |
| GATGTAAGGGTTTATATACA+GGG | + | chr2_4:5882696-5882715 | Msa0311030:intron | 30.0% | |
| !!! | GGATTCTCTTCTTTTTTTTG+TGG | + | chr2_4:5882729-5882748 | Msa0311030:intron | 30.0% |
| TGAAATATAGATGATCCATG+TGG | - | chr2_4:5882928-5882947 | None:intergenic | 30.0% | |
| AAAATACAAGCCAACAAATG+GGG | - | chr2_4:5883009-5883028 | None:intergenic | 30.0% | |
| GAAAATACAAGCCAACAAAT+GGG | - | chr2_4:5883010-5883029 | None:intergenic | 30.0% | |
| TGAAAATACAAGCCAACAAA+TGG | - | chr2_4:5883011-5883030 | None:intergenic | 30.0% | |
| !! | TTCTATTGAGAGACTTGTTA+AGG | - | chr2_4:5883044-5883063 | None:intergenic | 30.0% |
| ACCAATAATAGTAGTAATGC+TGG | + | chr2_4:5883162-5883181 | Msa0311030:intron | 30.0% | |
| ACCAGCATTACTACTATTAT+TGG | - | chr2_4:5883166-5883185 | None:intergenic | 30.0% | |
| AAGATAAGTTTGCACTTGAT+TGG | - | chr2_4:5883319-5883338 | None:intergenic | 30.0% | |
| !! | ATTCATTTTAATCCTTAGGG+TGG | + | chr2_4:5883371-5883390 | Msa0311030:intron | 30.0% |
| AACACATTATTGCATTATGG+TGG | - | chr2_4:5883475-5883494 | None:intergenic | 30.0% | |
| ATTACAATTATGCAACTGCT+AGG | - | chr2_4:5883704-5883723 | None:intergenic | 30.0% | |
| AGCAGTTGCATAATTGTAAT+AGG | + | chr2_4:5883704-5883723 | Msa0311030:intron | 30.0% | |
| ! | AGAATAAACATCACCTCTTT+TGG | + | chr2_4:5883742-5883761 | Msa0311030:intron | 30.0% |
| ! | AAAACAAGCGTAGTATTGAA+TGG | - | chr2_4:5884018-5884037 | None:intergenic | 30.0% |
| TGTAGAACTCCATAAAAAGA+TGG | + | chr2_4:5884230-5884249 | Msa0311030:CDS | 30.0% | |
| ATACCCTAATTTCATGACTT+TGG | - | chr2_4:5884650-5884669 | None:intergenic | 30.0% | |
| GTTGTACATTATCAGTTCAA+GGG | - | chr2_4:5884674-5884693 | None:intergenic | 30.0% | |
| TGTTGTACATTATCAGTTCA+AGG | - | chr2_4:5884675-5884694 | None:intergenic | 30.0% | |
| ! | TGTAATCTGGTTCAGAATTT+AGG | - | chr2_4:5884748-5884767 | None:intergenic | 30.0% |
| !! | CTTTTCAGAAATGAAAGCAT+AGG | - | chr2_4:5884801-5884820 | Msa0311040:CDS | 30.0% |
| !! | ATTACCTTAACTTCTGAAGC+TGG | - | chr2_4:5877318-5877337 | None:intergenic | 35.0% |
| !! | ATTACAACATGGTGATGGTT+TGG | - | chr2_4:5877450-5877469 | None:intergenic | 35.0% |
| CCATAATTACAACATGGTGA+TGG | - | chr2_4:5877455-5877474 | None:intergenic | 35.0% | |
| CCATCACCATGTTGTAATTA+TGG | + | chr2_4:5877452-5877471 | Msa0311030:intron | 35.0% | |
| ACAGTCCCATAATTACAACA+TGG | - | chr2_4:5877461-5877480 | None:intergenic | 35.0% | |
| ATTATGGGACTGTAGAAACT+AGG | + | chr2_4:5877468-5877487 | Msa0311030:intron | 35.0% | |
| TGAGTGAGAGTGAAATGATA+AGG | + | chr2_4:5877776-5877795 | Msa0311030:intron | 35.0% | |
| GAATCCGTGGTATTTATACA+AGG | + | chr2_4:5877865-5877884 | Msa0311030:intron | 35.0% | |
| CTGTATTACAGGATTTACCT+TGG | - | chr2_4:5878018-5878037 | None:intergenic | 35.0% | |
| GAACTACGAGTAGAAGAAAT+AGG | - | chr2_4:5878061-5878080 | None:intergenic | 35.0% | |
| ! | TTTTGTGCCTTCAATAGAAG+AGG | - | chr2_4:5878213-5878232 | None:intergenic | 35.0% |
| ! | ACAAGAAAGTGTGGATTGTA+TGG | + | chr2_4:5878267-5878286 | Msa0311030:intron | 35.0% |
| ATAATGTCTTTCTTCGTAGC+AGG | + | chr2_4:5878383-5878402 | Msa0311030:intron | 35.0% | |
| AAGCCAAGATTCTAGTGAAA+CGG | + | chr2_4:5878464-5878483 | Msa0311030:intron | 35.0% | |
| TCACATCCCTTTCAAAAACA+TGG | + | chr2_4:5878950-5878969 | Msa0311030:intron | 35.0% | |
| !! | GTTGAAAGTGTCCATGATAA+GGG | - | chr2_4:5879059-5879078 | None:intergenic | 35.0% |
| !! | TGTTGAAAGTGTCCATGATA+AGG | - | chr2_4:5879060-5879079 | None:intergenic | 35.0% |
| TGGAAGAGTAATTTACTAGC+AGG | + | chr2_4:5879196-5879215 | Msa0311030:intron | 35.0% | |
| GGAAGAGTAATTTACTAGCA+GGG | + | chr2_4:5879197-5879216 | Msa0311030:intron | 35.0% | |
| TCAAAATGACCTGTTTACTC+GGG | - | chr2_4:5879257-5879276 | None:intergenic | 35.0% | |
| CAACGACACAAATTAGAATG+AGG | + | chr2_4:5879752-5879771 | Msa0311030:intron | 35.0% | |
| CAACATTTCTTCAGGCATTA+TGG | - | chr2_4:5879883-5879902 | None:intergenic | 35.0% | |
| ! | TTATCTTAAGGTCTTTTGGG+GGG | + | chr2_4:5879904-5879923 | Msa0311030:intron | 35.0% |
| !! | GGAGGTGTTATTAAGAAAGA+AGG | + | chr2_4:5879925-5879944 | Msa0311030:intron | 35.0% |
| GTTATTAAGAAAGAAGGGAC+TGG | + | chr2_4:5879931-5879950 | Msa0311030:intron | 35.0% | |
| ! | ACTTTTAGGCCAAAGAAAGA+AGG | + | chr2_4:5880095-5880114 | Msa0311030:intron | 35.0% |
| CACTTATGTGTGTATGAGAA+TGG | + | chr2_4:5880295-5880314 | Msa0311030:intron | 35.0% | |
| ATTCTAAGTCTGATCTGTTG+TGG | + | chr2_4:5880333-5880352 | Msa0311030:intron | 35.0% | |
| !! | TCACATTGTTTAGTTTGGGT+TGG | + | chr2_4:5880499-5880518 | Msa0311030:intron | 35.0% |
| AAAAGACATGACACGATGAA+AGG | - | chr2_4:5880669-5880688 | None:intergenic | 35.0% | |
| ! | GTTTTTACTTTATCTCTCGG+TGG | + | chr2_4:5881137-5881156 | Msa0311030:intron | 35.0% |
| !!! | GTATTTTTTTCATGGTCCAC+CGG | - | chr2_4:5881195-5881214 | None:intergenic | 35.0% |
| TGTGATACTGTCAGATTTCA+GGG | - | chr2_4:5881326-5881345 | None:intergenic | 35.0% | |
| TTGTGATACTGTCAGATTTC+AGG | - | chr2_4:5881327-5881346 | None:intergenic | 35.0% | |
| AATGGCCATAAATTAGGTTC+TGG | + | chr2_4:5881484-5881503 | Msa0311030:intron | 35.0% | |
| !! | ATCTGCTTTCTTTTTGGTCT+TGG | + | chr2_4:5881643-5881662 | Msa0311030:intron | 35.0% |
| GAATTGCAACTAACAAGTGT+TGG | - | chr2_4:5881733-5881752 | None:intergenic | 35.0% | |
| CGACAAACATTAGGAAATTG+AGG | + | chr2_4:5881762-5881781 | Msa0311030:intron | 35.0% | |
| !! | GTATTTTTGTCATGGTTCAC+CGG | + | chr2_4:5881885-5881904 | Msa0311030:intron | 35.0% |
| GAGAGATAAGGTGAATTCTA+GGG | - | chr2_4:5881934-5881953 | None:intergenic | 35.0% | |
| AGAGAGATAAGGTGAATTCT+AGG | - | chr2_4:5881935-5881954 | None:intergenic | 35.0% | |
| GATAAACTATTGGACAACCA+TGG | - | chr2_4:5882007-5882026 | None:intergenic | 35.0% | |
| ! | TTTTAACGTTGAGTGAGTTC+AGG | - | chr2_4:5882181-5882200 | None:intergenic | 35.0% |
| ACTCAACGTTAAAAGACTAC+AGG | + | chr2_4:5882187-5882206 | Msa0311030:intron | 35.0% | |
| ! | CAATCCATATATTCTAAGGG+TGG | - | chr2_4:5882229-5882248 | None:intergenic | 35.0% |
| CACCCTTAGAATATATGGAT+TGG | + | chr2_4:5882227-5882246 | Msa0311030:intron | 35.0% | |
| GATAACTCTCTCAAAAGCTT+TGG | - | chr2_4:5882609-5882628 | None:intergenic | 35.0% | |
| !! | ATTTTCTTTGGTGATAGGAC+TGG | + | chr2_4:5882655-5882674 | Msa0311030:intron | 35.0% |
| TACATCTCTCTTCAACTGAA+TGG | - | chr2_4:5882682-5882701 | None:intergenic | 35.0% | |
| TTCAGTTGAAGAGAGATGTA+AGG | + | chr2_4:5882682-5882701 | Msa0311030:intron | 35.0% | |
| TCAGTTGAAGAGAGATGTAA+GGG | + | chr2_4:5882683-5882702 | Msa0311030:intron | 35.0% | |
| AAAAAGAAGAGAATCCGTTC+CGG | - | chr2_4:5882725-5882744 | None:intergenic | 35.0% | |
| !!! | CTTCTTTTTTTTGTGGTGTC+CGG | + | chr2_4:5882736-5882755 | Msa0311030:intron | 35.0% |
| !!! | TTCTTTTTTTTGTGGTGTCC+GGG | + | chr2_4:5882737-5882756 | Msa0311030:intron | 35.0% |
| GACAATGCATAATGTATGCA+AGG | - | chr2_4:5882776-5882795 | None:intergenic | 35.0% | |
| GGATTCTCTTAACACATGAT+CGG | + | chr2_4:5882830-5882849 | Msa0311030:intron | 35.0% | |
| TTGAGATTTGATAGAGAGGT+AGG | - | chr2_4:5882899-5882918 | None:intergenic | 35.0% | |
| AAATACAAGCCAACAAATGG+GGG | - | chr2_4:5883008-5883027 | None:intergenic | 35.0% | |
| CCATGGAATTACTGTATATG+TGG | - | chr2_4:5883121-5883140 | None:intergenic | 35.0% | |
| CCACATATACAGTAATTCCA+TGG | + | chr2_4:5883118-5883137 | Msa0311030:intron | 35.0% | |
| TGGTTAACCTATGTTTCGAA+TGG | - | chr2_4:5883146-5883165 | None:intergenic | 35.0% | |
| CTCTGCAAAAGTCTAGTATT+TGG | + | chr2_4:5883259-5883278 | Msa0311030:intron | 35.0% | |
| ! | TTATATAGAGTACCACCCTA+AGG | - | chr2_4:5883386-5883405 | None:intergenic | 35.0% |
| TAGAGAAACCAACAGCATTA+AGG | - | chr2_4:5883518-5883537 | None:intergenic | 35.0% | |
| !! | GTATTTCCACTTGCTAGTTT+TGG | + | chr2_4:5883602-5883621 | Msa0311030:intron | 35.0% |
| ACACAACAGTCATTAATGTG+CGG | - | chr2_4:5884042-5884061 | None:intergenic | 35.0% | |
| AGTCAAAATATGATCCTGCA+GGG | - | chr2_4:5884077-5884096 | None:intergenic | 35.0% | |
| TAGTCAAAATATGATCCTGC+AGG | - | chr2_4:5884078-5884097 | None:intergenic | 35.0% | |
| GATTAAAGAACTGCACCAAA+AGG | + | chr2_4:5884102-5884121 | Msa0311030:CDS | 35.0% | |
| ! | ATGAGACTCTCAATACCTTT+TGG | - | chr2_4:5884120-5884139 | None:intergenic | 35.0% |
| TAGCATTAGTGGAAATTGGT+CGG | - | chr2_4:5884181-5884200 | None:intergenic | 35.0% | |
| ACAGTAGCATTAGTGGAAAT+TGG | - | chr2_4:5884185-5884204 | None:intergenic | 35.0% | |
| ATTTCCACTAATGCTACTGT+AGG | + | chr2_4:5884185-5884204 | Msa0311030:intron | 35.0% | |
| TTTCCACTAATGCTACTGTA+GGG | + | chr2_4:5884186-5884205 | Msa0311030:intron | 35.0% | |
| ! | GGAGTTCTACATTTTCTTGA+TGG | - | chr2_4:5884221-5884240 | None:intergenic | 35.0% |
| !! | GTAGCTCTGCATTTTCTTTT+TGG | - | chr2_4:5884263-5884282 | None:intergenic | 35.0% |
| ! | TCTGATAGTGCATGAAAGAT+TGG | - | chr2_4:5884554-5884573 | None:intergenic | 35.0% |
| CTTTCATGCACTATCAGAAA+TGG | + | chr2_4:5884556-5884575 | Msa0311030:CDS | 35.0% | |
| TTGTTAATGCAGCTGTAATC+TGG | - | chr2_4:5884761-5884780 | None:intergenic | 35.0% | |
| !!! | GCACGATCATATGTTTTAAC+TGG | - | chr2_4:5884834-5884853 | Msa0311040:intron | 35.0% |
| GAATCCAGCTTCAGAAGTTA+AGG | + | chr2_4:5877311-5877330 | Msa0311030:CDS | 40.0% | |
| CACCCCCATAAATGTGTTAA+TGG | - | chr2_4:5877502-5877521 | None:intergenic | 40.0% | |
| CATTAACACATTTATGGGGG+TGG | + | chr2_4:5877500-5877519 | Msa0311030:intron | 40.0% | |
| ! | TTAGGGCTTTGTGATTAGAG+AGG | + | chr2_4:5877750-5877769 | Msa0311030:intron | 40.0% |
| GATTTACCTTGGACACACTA+GGG | - | chr2_4:5878007-5878026 | None:intergenic | 40.0% | |
| !! | AGGAAGGTGTCTATTTCTAG+CGG | - | chr2_4:5878083-5878102 | None:intergenic | 40.0% |
| GAGGAAAGGGAATAAGATGT+AGG | - | chr2_4:5878194-5878213 | None:intergenic | 40.0% | |
| TCCCTTTCCTCTTCTATTGA+AGG | + | chr2_4:5878203-5878222 | Msa0311030:intron | 40.0% | |
| GCCTTCAATAGAAGAGGAAA+GGG | - | chr2_4:5878207-5878226 | None:intergenic | 40.0% | |
| TGCCTTCAATAGAAGAGGAA+AGG | - | chr2_4:5878208-5878227 | None:intergenic | 40.0% | |
| TTACACACGACAAGAAAGTG+TGG | + | chr2_4:5878258-5878277 | Msa0311030:intron | 40.0% | |
| ACCATCAAATTAGAGGGAAG+AGG | + | chr2_4:5878651-5878670 | Msa0311030:intron | 40.0% | |
| TCCTCTTCCCTCTAATTTGA+TGG | - | chr2_4:5878655-5878674 | None:intergenic | 40.0% | |
| !! | CGTTTTAGATAGTGCGTGTT+TGG | + | chr2_4:5878739-5878758 | Msa0311030:intron | 40.0% |
| !!! | GTTACTTTTTTGGCACGTGA+AGG | - | chr2_4:5878920-5878939 | None:intergenic | 40.0% |
| !! | GAGCAGCCATGTTTTTGAAA+GGG | - | chr2_4:5878959-5878978 | None:intergenic | 40.0% |
| CAGACAAATGGATCTTCCTA+GGG | - | chr2_4:5878981-5879000 | None:intergenic | 40.0% | |
| ACAGACAAATGGATCTTCCT+AGG | - | chr2_4:5878982-5879001 | None:intergenic | 40.0% | |
| TTCACATTCCTTCGCATGTT+AGG | + | chr2_4:5879152-5879171 | Msa0311030:intron | 40.0% | |
| TGACTCTGTTCCAAAGTCTT+GGG | - | chr2_4:5879700-5879719 | None:intergenic | 40.0% | |
| TTGACTCTGTTCCAAAGTCT+TGG | - | chr2_4:5879701-5879720 | None:intergenic | 40.0% | |
| !! | AAGACTTTGGAACAGAGTCA+AGG | + | chr2_4:5879700-5879719 | Msa0311030:intron | 40.0% |
| !!! | AAGAAGGGACTGGTTAGTTT+TGG | + | chr2_4:5879941-5879960 | Msa0311030:intron | 40.0% |
| !!! | ACTGGTTAGTTTTGGTAGAG+TGG | + | chr2_4:5879949-5879968 | Msa0311030:intron | 40.0% |
| !!! | CTGGTTAGTTTTGGTAGAGT+GGG | + | chr2_4:5879950-5879969 | Msa0311030:intron | 40.0% |
| AACTTGGTCCTTGAGATAAG+AGG | + | chr2_4:5880143-5880162 | Msa0311030:intron | 40.0% | |
| ATCTACTGCTTGAAGGAGAT+TGG | - | chr2_4:5880392-5880411 | None:intergenic | 40.0% | |
| TGCGATAATCTACTGCTTGA+AGG | - | chr2_4:5880399-5880418 | None:intergenic | 40.0% | |
| !! | TGAGTGGCATGATTTGGTTA+TGG | + | chr2_4:5880593-5880612 | Msa0311030:intron | 40.0% |
| !! | GAGTGGCATGATTTGGTTAT+GGG | + | chr2_4:5880594-5880613 | Msa0311030:intron | 40.0% |
| ! | TTATCTCTCGGTGGATTCTA+AGG | + | chr2_4:5881146-5881165 | Msa0311030:intron | 40.0% |
| GTGATACTGTCAGATTTCAG+GGG | - | chr2_4:5881325-5881344 | None:intergenic | 40.0% | |
| AACATTAGGAAATTGAGGGG+AGG | + | chr2_4:5881767-5881786 | Msa0311030:intron | 40.0% | |
| !! | TGTGTGTGAACAAGTGTTGA+TGG | + | chr2_4:5881815-5881834 | Msa0311030:intron | 40.0% |
| GGTTCAATTAAGTCCTTCAC+CGG | - | chr2_4:5881907-5881926 | None:intergenic | 40.0% | |
| !! | TAAGGTGAATTCTAGGGTGA+GGG | - | chr2_4:5881928-5881947 | None:intergenic | 40.0% |
| !! | ATAAGGTGAATTCTAGGGTG+AGG | - | chr2_4:5881929-5881948 | None:intergenic | 40.0% |
| ATCGCCACCCTTAGAATATA+TGG | + | chr2_4:5882222-5882241 | Msa0311030:intron | 40.0% | |
| TGAGAGAGTTATCAGATCCA+TGG | + | chr2_4:5882616-5882635 | Msa0311030:intron | 40.0% | |
| AAAAGAAGAGAATCCGTTCC+GGG | - | chr2_4:5882724-5882743 | None:intergenic | 40.0% | |
| GCATAATGTATGCAAGGTCT+GGG | - | chr2_4:5882770-5882789 | None:intergenic | 40.0% | |
| TGCATAATGTATGCAAGGTC+TGG | - | chr2_4:5882771-5882790 | None:intergenic | 40.0% | |
| TGTGTTAAGAGAATCCGTTC+CGG | - | chr2_4:5882826-5882845 | None:intergenic | 40.0% | |
| GATTCTACTTGTGTGCATTC+TGG | - | chr2_4:5883099-5883118 | None:intergenic | 40.0% | |
| ! | AATGTACTCTAGAGAACGAG+TGG | + | chr2_4:5883202-5883221 | Msa0311030:intron | 40.0% |
| GGTTAGAGAGACACAAAAGA+GGG | - | chr2_4:5883235-5883254 | None:intergenic | 40.0% | |
| TGGTTAGAGAGACACAAAAG+AGG | - | chr2_4:5883236-5883255 | None:intergenic | 40.0% | |
| ! | ACTAGACTTTTGCAGAGAAG+TGG | - | chr2_4:5883256-5883275 | None:intergenic | 40.0% |
| TGGTTCCATTTCCATCAATG+GGG | - | chr2_4:5883285-5883304 | None:intergenic | 40.0% | |
| GTGGTTCCATTTCCATCAAT+GGG | - | chr2_4:5883286-5883305 | None:intergenic | 40.0% | |
| ATTGATGGAAATGGAACCAC+CGG | + | chr2_4:5883286-5883305 | Msa0311030:intron | 40.0% | |
| AACCAACAGCATTAAGGACA+GGG | - | chr2_4:5883512-5883531 | None:intergenic | 40.0% | |
| AAACCAACAGCATTAAGGAC+AGG | - | chr2_4:5883513-5883532 | None:intergenic | 40.0% | |
| AGTACTTGCAAGAAAGCCAT+AGG | + | chr2_4:5883659-5883678 | Msa0311030:CDS | 40.0% | |
| TGGTAAAACCAGGCAATTGA+TGG | + | chr2_4:5883877-5883896 | Msa0311030:intron | 40.0% | |
| GGTAAAACCAGGCAATTGAT+GGG | + | chr2_4:5883878-5883897 | Msa0311030:intron | 40.0% | |
| ACAGAATCTGGAAAACCAAC+TGG | + | chr2_4:5883934-5883953 | Msa0311030:CDS | 40.0% | |
| !! | CAACTGGAGATTAGTCTGAA+GGG | + | chr2_4:5883950-5883969 | Msa0311030:CDS | 40.0% |
| !! | GAAGGGTGTTCGAATGAAAA+AGG | + | chr2_4:5883967-5883986 | Msa0311030:CDS | 40.0% |
| ! | TCGAATGAAAAAGGTATGCC+AGG | + | chr2_4:5883976-5883995 | Msa0311030:intron | 40.0% |
| GGATGAGATTTGAATTGACC+TGG | - | chr2_4:5883997-5884016 | None:intergenic | 40.0% | |
| TATGATCCTGCAGGGAAATT+GGG | - | chr2_4:5884069-5884088 | None:intergenic | 40.0% | |
| ATATGATCCTGCAGGGAAAT+TGG | - | chr2_4:5884070-5884089 | None:intergenic | 40.0% | |
| GGAAATTGGTCGGTAATTTG+TGG | - | chr2_4:5884171-5884190 | None:intergenic | 40.0% | |
| TTTCCCTACAGTAGCATTAG+TGG | - | chr2_4:5884192-5884211 | None:intergenic | 40.0% | |
| ! | GGACGACATCCATCTTTTTA+TGG | - | chr2_4:5884242-5884261 | None:intergenic | 40.0% |
| AAATGCAGAGCTACTGAAGA+AGG | + | chr2_4:5884269-5884288 | Msa0311030:CDS | 40.0% | |
| CGGCCAAAGTCATGAAATTA+GGG | + | chr2_4:5884644-5884663 | Msa0311030:intron | 40.0% | |
| GCGCTACAACAAACAGAAAG+AGG | + | chr2_4:5877272-5877291 | Msa0311030:CDS | 45.0% | |
| GGATTTACCTTGGACACACT+AGG | - | chr2_4:5878008-5878027 | None:intergenic | 45.0% | |
| !! | AGAATGGGGTGCTGTATTAC+AGG | - | chr2_4:5878029-5878048 | None:intergenic | 45.0% |
| TCCAGTAAGCGAGATGATTG+CGG | + | chr2_4:5878300-5878319 | Msa0311030:intron | 45.0% | |
| !! | GTGCCGTTTCACTAGAATCT+TGG | - | chr2_4:5878470-5878489 | None:intergenic | 45.0% |
| !! | TGCGTGTTTGGCTTCACTTT+TGG | + | chr2_4:5878751-5878770 | Msa0311030:intron | 45.0% |
| !! | GCGTGTTTGGCTTCACTTTT+GGG | + | chr2_4:5878752-5878771 | Msa0311030:intron | 45.0% |
| !! | GGAGCAGCCATGTTTTTGAA+AGG | - | chr2_4:5878960-5878979 | None:intergenic | 45.0% |
| AAGGGAATTCCCGAGTAAAC+AGG | + | chr2_4:5879245-5879264 | Msa0311030:intron | 45.0% | |
| TGACGTCTCCTCTTATCTCA+AGG | - | chr2_4:5880154-5880173 | None:intergenic | 45.0% | |
| GGTTCAATTAAGTCCCTCAC+CGG | + | chr2_4:5881173-5881192 | Msa0311030:intron | 45.0% | |
| AGATTTCAGGGGAGTTGAAG+AGG | - | chr2_4:5881314-5881333 | None:intergenic | 45.0% | |
| GTGTACATCTTCGACAAGAG+TGG | + | chr2_4:5881699-5881718 | Msa0311030:intron | 45.0% | |
| ! | TATTCTAAGGGTGGCGATAC+AGG | - | chr2_4:5882220-5882239 | None:intergenic | 45.0% |
| GGGTTTATATACAGGGAACC+CGG | + | chr2_4:5882703-5882722 | Msa0311030:intron | 45.0% | |
| TATATACAGGGAACCCGGAA+CGG | + | chr2_4:5882708-5882727 | Msa0311030:intron | 45.0% | |
| AACAAATGGGGGTCCATGAA+TGG | - | chr2_4:5882997-5883016 | None:intergenic | 45.0% | |
| ATTCATGGACCCCCATTTGT+TGG | + | chr2_4:5882996-5883015 | Msa0311030:intron | 45.0% | |
| CTATGTTTCGAATGGCACCA+TGG | - | chr2_4:5883138-5883157 | None:intergenic | 45.0% | |
| !! | CATGGTGCCATTCGAAACAT+AGG | + | chr2_4:5883136-5883155 | Msa0311030:intron | 45.0% |
| CTAGTATTTGGCCCCATTGA+TGG | + | chr2_4:5883271-5883290 | Msa0311030:intron | 45.0% | |
| TTTGGCCCCATTGATGGAAA+TGG | + | chr2_4:5883277-5883296 | Msa0311030:intron | 45.0% | |
| GGTGGTTCCATTTCCATCAA+TGG | - | chr2_4:5883287-5883306 | None:intergenic | 45.0% | |
| ! | GCACTTGATTGGTTGATTGC+CGG | - | chr2_4:5883308-5883327 | None:intergenic | 45.0% |
| TGTCTGCCAAAACTAGCAAG+TGG | - | chr2_4:5883611-5883630 | None:intergenic | 45.0% | |
| GTACTGCAGTTGTTGTCTCA+GGG | - | chr2_4:5883644-5883663 | None:intergenic | 45.0% | |
| AGTACTGCAGTTGTTGTCTC+AGG | - | chr2_4:5883645-5883664 | None:intergenic | 45.0% | |
| ! | TTGATGGGTGAAGGACTTTC+TGG | + | chr2_4:5883893-5883912 | Msa0311030:CDS | 45.0% |
| ! | TGATGGGTGAAGGACTTTCT+GGG | + | chr2_4:5883894-5883913 | Msa0311030:CDS | 45.0% |
| CCTTCAGACTAATCTCCAGT+TGG | - | chr2_4:5883952-5883971 | None:intergenic | 45.0% | |
| !! | CCAACTGGAGATTAGTCTGA+AGG | + | chr2_4:5883949-5883968 | Msa0311030:CDS | 45.0% |
| ATGATCCTGCAGGGAAATTG+GGG | - | chr2_4:5884068-5884087 | None:intergenic | 45.0% | |
| AATTTCATGACTTTGGCCGC+TGG | - | chr2_4:5884643-5884662 | None:intergenic | 45.0% | |
| GCGGCCAAAGTCATGAAATT+AGG | + | chr2_4:5884643-5884662 | Msa0311030:intron | 45.0% | |
| ! | TATGATCGTGCTGCTATGTG+TGG | + | chr2_4:5884843-5884862 | Msa0311030:CDS | 45.0% |
| ! | ATGATCGTGCTGCTATGTGT+GGG | + | chr2_4:5884844-5884863 | Msa0311030:CDS | 45.0% |
| !!! | ATTACATATATATTTTTAAA+CGG | - | chr2_4:5882154-5882173 | None:intergenic | 5.0% |
| !!! | ATTGTTATTTATTTATTTTT+TGG | + | chr2_4:5883776-5883795 | Msa0311030:intron | 5.0% |
| !!! | TTGTTATTTATTTATTTTTT+GGG | + | chr2_4:5883777-5883796 | Msa0311030:intron | 5.0% |
| TACTCACCCTAGTGTGTCCA+AGG | + | chr2_4:5877998-5878017 | Msa0311030:intron | 50.0% | |
| ACCGCAATCATCTCGCTTAC+TGG | - | chr2_4:5878304-5878323 | None:intergenic | 50.0% | |
| CAAAAACATGGCTGCTCCCT+AGG | + | chr2_4:5878962-5878981 | Msa0311030:intron | 50.0% | |
| TTAGGCCAAGCCCAAGACTT+TGG | + | chr2_4:5879687-5879706 | Msa0311030:intron | 50.0% | |
| CTGTTCCAAAGTCTTGGGCT+TGG | - | chr2_4:5879695-5879714 | None:intergenic | 50.0% | |
| !! | TCTTAAGGTCTTTTGGGGGG+AGG | + | chr2_4:5879907-5879926 | Msa0311030:intron | 50.0% |
| !! | TCTCGGTGGATTCTAAGGTG+AGG | + | chr2_4:5881151-5881170 | Msa0311030:intron | 50.0% |
| !! | CTCGGTGGATTCTAAGGTGA+GGG | + | chr2_4:5881152-5881171 | Msa0311030:intron | 50.0% |
| TCAATTAAGTCCCTCACCGG+TGG | + | chr2_4:5881176-5881195 | Msa0311030:intron | 50.0% | |
| ! | TTTTCATGGTCCACCGGTGA+GGG | - | chr2_4:5881189-5881208 | None:intergenic | 50.0% |
| ! | TTTTTCATGGTCCACCGGTG+AGG | - | chr2_4:5881190-5881209 | None:intergenic | 50.0% |
| ! | GGAGGCATGAGGAAGACATA+AGG | + | chr2_4:5881785-5881804 | Msa0311030:intron | 50.0% |
| TTGTCATGGTTCACCGGTGA+AGG | + | chr2_4:5881891-5881910 | Msa0311030:intron | 50.0% | |
| CAAGGTCTGGGTTTGAATCC+CGG | - | chr2_4:5882758-5882777 | None:intergenic | 50.0% | |
| ! | GGAGCTTAGCTCAGTTGGTA+AGG | - | chr2_4:5882798-5882817 | None:intergenic | 50.0% |
| ACCAACTGAGCTAAGCTCCA+AGG | + | chr2_4:5882799-5882818 | Msa0311030:intron | 50.0% | |
| TCCTTGGAGCTTAGCTCAGT+TGG | - | chr2_4:5882803-5882822 | None:intergenic | 50.0% | |
| ! | CTTGATTGGTTGATTGCCGG+TGG | - | chr2_4:5883305-5883324 | None:intergenic | 50.0% |
| GTCCCTGTCCTTAATGCTGT+TGG | + | chr2_4:5883507-5883526 | Msa0311030:intron | 50.0% | |
| ! | TGGGTGGGGAGCATAAGAAA+AGG | + | chr2_4:5883796-5883815 | Msa0311030:intron | 50.0% |
| ! | ACCAGGCAATTGATGGGTGA+AGG | + | chr2_4:5883884-5883903 | Msa0311030:intron | 50.0% |
| TCCTTCACCCATCAATTGCC+TGG | - | chr2_4:5883888-5883907 | None:intergenic | 50.0% | |
| GGTGAAGGACTTTCTGGGTT+GGG | + | chr2_4:5883899-5883918 | Msa0311030:CDS | 50.0% | |
| TGGCTTAGCTGGAGACTGAT+AGG | - | chr2_4:5884598-5884617 | None:intergenic | 50.0% | |
| GGTTCACTGTATTGAGGCTG+TGG | - | chr2_4:5884622-5884641 | None:intergenic | 50.0% | |
| GCCTCAATACAGTGAACCAG+CGG | + | chr2_4:5884624-5884643 | Msa0311030:CDS | 50.0% | |
| ! | GGAAATTGAGGGGAGGCATG+AGG | + | chr2_4:5881774-5881793 | Msa0311030:intron | 55.0% |
| CTGAGCTAAGCTCCAAGGAC+CGG | + | chr2_4:5882804-5882823 | Msa0311030:intron | 55.0% | |
| CTAAGCTCCAAGGACCGGAA+CGG | + | chr2_4:5882809-5882828 | Msa0311030:intron | 55.0% | |
| AGAGAATCCGTTCCGGTCCT+TGG | - | chr2_4:5882819-5882838 | None:intergenic | 55.0% | |
| GGGTGAAGGACTTTCTGGGT+TGG | + | chr2_4:5883898-5883917 | Msa0311030:CDS | 55.0% | |
| GTTGTCCCCAATTTCCCTGC+AGG | + | chr2_4:5884060-5884079 | Msa0311030:intron | 55.0% | |
| CACTGTATTGAGGCTGTGGC+TGG | - | chr2_4:5884618-5884637 | None:intergenic | 55.0% | |
| !! | GCCGCTGGTTCACTGTATTG+AGG | - | chr2_4:5884628-5884647 | None:intergenic | 55.0% |
| !! | GAGGCTGTGGCTGGCTTAGC+TGG | - | chr2_4:5884609-5884628 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 5877255 | 5884875 | 5877255 | ID=Msa0311030;Name=Msa0311030 |
| chr2_4 | mRNA | 5877255 | 5884875 | 5877255 | ID=Msa0311030-mRNA-1;Parent=Msa0311030;Name=Msa0311030-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|7|0|206 |
| chr2_4 | exon | 5877255 | 5877332 | 5877255 | ID=Msa0311030-mRNA-1:exon:2204;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5883619 | 5883680 | 5883619 | ID=Msa0311030-mRNA-1:exon:2205;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5883889 | 5883988 | 5883889 | ID=Msa0311030-mRNA-1:exon:2206;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5884082 | 5884123 | 5884082 | ID=Msa0311030-mRNA-1:exon:2207;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5884207 | 5884290 | 5884207 | ID=Msa0311030-mRNA-1:exon:2208;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5884511 | 5884651 | 5884511 | ID=Msa0311030-mRNA-1:exon:2209;Parent=Msa0311030-mRNA-1 |
| chr2_4 | exon | 5884762 | 5884875 | 5884762 | ID=Msa0311030-mRNA-1:exon:2210;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5877255 | 5877332 | 5877255 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5883619 | 5883680 | 5883619 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5883889 | 5883988 | 5883889 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5884082 | 5884123 | 5884082 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5884207 | 5884290 | 5884207 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5884511 | 5884651 | 5884511 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| chr2_4 | CDS | 5884762 | 5884875 | 5884762 | ID=Msa0311030-mRNA-1:cds;Parent=Msa0311030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
