Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168310 | XP_013468573.1 | 99.444 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168310 | sp|O04336|WRK21_ARATH | 56.104 | 385 | 131 | 15 | 1 | 356 | 1 | 376 | 3.58e-114 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168310 | A0A072VWY9 | 99.444 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 0.0 | 746 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0168310 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0168310 | 0.813180 | 2.915924e-51 | -8.615850e-47 |
| Msa0010110 | Msa0168310 | 0.800440 | 1.439548e-48 | -8.615850e-47 |
| Msa0038290 | Msa0168310 | -0.835915 | 1.270328e-56 | -8.615850e-47 |
| Msa0042490 | Msa0168310 | -0.822590 | 2.183295e-53 | -8.615850e-47 |
| Msa0059840 | Msa0168310 | 0.800874 | 1.174078e-48 | -8.615850e-47 |
| Msa0075160 | Msa0168310 | -0.809448 | 1.882633e-50 | -8.615850e-47 |
| Msa0075740 | Msa0168310 | 0.868627 | 5.671982e-66 | -8.615850e-47 |
| Msa0075750 | Msa0168310 | 0.873917 | 1.013740e-67 | -8.615850e-47 |
| Msa0079580 | Msa0168310 | -0.822987 | 1.764991e-53 | -8.615850e-47 |
| Msa0081780 | Msa0168310 | 0.842748 | 2.139993e-58 | -8.615850e-47 |
| Msa0093950 | Msa0168310 | -0.869734 | 2.479103e-66 | -8.615850e-47 |
| Msa0095940 | Msa0168310 | 0.812354 | 4.423523e-51 | -8.615850e-47 |
| Msa0101500 | Msa0168310 | -0.825469 | 4.607677e-54 | -8.615850e-47 |
| Msa0123000 | Msa0168310 | -0.818870 | 1.564386e-52 | -8.615850e-47 |
| Msa0123800 | Msa0168310 | 0.910770 | 1.291263e-82 | -8.615850e-47 |
| Msa0132630 | Msa0168310 | -0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0136870 | Msa0168310 | -0.835888 | 1.291046e-56 | -8.615850e-47 |
| Msa0148080 | Msa0168310 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
| Msa0167500 | Msa0168310 | -0.836972 | 6.841408e-57 | -8.615850e-47 |
| Msa0168310 | Msa0168410 | -0.819418 | 1.173776e-52 | -8.615850e-47 |
| Msa0168310 | Msa0174090 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
| Msa0168310 | Msa0178840 | -0.842806 | 2.064962e-58 | -8.615850e-47 |
| Msa0168310 | Msa0187590 | -0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa0168310 | Msa0213410 | 0.800108 | 1.682384e-48 | -8.615850e-47 |
| Msa0168310 | Msa0220400 | -0.878945 | 1.862059e-69 | -8.615850e-47 |
| Msa0168310 | Msa0220850 | 0.805968 | 1.033151e-49 | -8.615850e-47 |
| Msa0168310 | Msa0240900 | 0.811566 | 6.565508e-51 | -8.615850e-47 |
| Msa0168310 | Msa0240920 | 0.822761 | 1.992106e-53 | -8.615850e-47 |
| Msa0168310 | Msa0244640 | 0.816192 | 6.276360e-52 | -8.615850e-47 |
| Msa0168310 | Msa0274310 | -0.811312 | 7.456308e-51 | -8.615850e-47 |
| Msa0168310 | Msa0277960 | 0.802651 | 5.071373e-49 | -8.615850e-47 |
| Msa0168310 | Msa0283330 | 0.802119 | 6.525950e-49 | -8.615850e-47 |
| Msa0168310 | Msa0299530 | -0.836698 | 8.036321e-57 | -8.615850e-47 |
| Msa0168310 | Msa0311030 | 0.845769 | 3.302460e-59 | -8.615850e-47 |
| Msa0168310 | Msa0318680 | 0.822391 | 2.428607e-53 | -8.615850e-47 |
| Msa0168310 | Msa0349210 | 0.803133 | 4.031400e-49 | -8.615850e-47 |
| Msa0168310 | Msa0349340 | 0.827113 | 1.871771e-54 | -8.615850e-47 |
| Msa0168310 | Msa0372300 | 0.803065 | 4.163774e-49 | -8.615850e-47 |
| Msa0168310 | Msa0396240 | 0.809974 | 1.451171e-50 | -8.615850e-47 |
| Msa0168310 | Msa0457560 | 0.804307 | 2.299753e-49 | -8.615850e-47 |
| Msa0168310 | Msa0513970 | 0.808648 | 2.793776e-50 | -8.615850e-47 |
| Msa0168310 | Msa0523490 | -0.827316 | 1.673559e-54 | -8.615850e-47 |
| Msa0168310 | Msa0525770 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0168310 | Msa0530560 | 0.809183 | 2.145603e-50 | -8.615850e-47 |
| Msa0168310 | Msa0534150 | 0.815662 | 8.240296e-52 | -8.615850e-47 |
| Msa0168310 | Msa0548650 | -0.832021 | 1.198664e-55 | -8.615850e-47 |
| Msa0168310 | Msa0558650 | 0.803075 | 4.143548e-49 | -8.615850e-47 |
| Msa0168310 | Msa0582490 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
| Msa0168310 | Msa0587120 | 0.802246 | 6.143763e-49 | -8.615850e-47 |
| Msa0168310 | Msa0589260 | -0.815903 | 7.283845e-52 | -8.615850e-47 |
| Msa0168310 | Msa0590150 | 0.828894 | 6.974409e-55 | -8.615850e-47 |
| Msa0168310 | Msa0637930 | -0.834704 | 2.569880e-56 | -8.615850e-47 |
| Msa0168310 | Msa0638010 | -0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0168310 | Msa0686950 | -0.858872 | 6.114685e-63 | -8.615850e-47 |
| Msa0168310 | Msa0707250 | 0.801783 | 7.649840e-49 | -8.615850e-47 |
| Msa0168310 | Msa0733010 | 0.812639 | 3.830749e-51 | -8.615850e-47 |
| Msa0168310 | Msa0769300 | 0.815360 | 9.619579e-52 | -8.615850e-47 |
| Msa0168310 | Msa0822320 | -0.804372 | 2.229720e-49 | -8.615850e-47 |
| Msa0168310 | Msa0823370 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa0168310 | Msa0827520 | -0.855366 | 6.618684e-62 | -8.615850e-47 |
| Msa0168310 | Msa0829300 | 0.818667 | 1.739079e-52 | -8.615850e-47 |
| Msa0168310 | Msa0829330 | 0.825166 | 5.436172e-54 | -8.615850e-47 |
| Msa0168310 | Msa0831110 | 0.804967 | 1.675313e-49 | -8.615850e-47 |
| Msa0168310 | Msa0833270 | 0.817175 | 3.780004e-52 | -8.615850e-47 |
| Msa0168310 | Msa0833530 | 0.800336 | 1.511978e-48 | -8.615850e-47 |
| Msa0168310 | Msa0833950 | -0.825066 | 5.738558e-54 | -8.615850e-47 |
| Msa0168310 | Msa0878220 | 0.812825 | 3.488302e-51 | -8.615850e-47 |
| Msa0168310 | Msa0881530 | -0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0168310 | Msa0943970 | 0.837029 | 6.613965e-57 | -8.615850e-47 |
| Msa0168310 | Msa0944020 | 0.818031 | 2.423078e-52 | -8.615850e-47 |
| Msa0168310 | Msa0967170 | 0.828298 | 9.716215e-55 | -8.615850e-47 |
| Msa0168310 | Msa0982090 | -0.819260 | 1.274851e-52 | -8.615850e-47 |
| Msa0168310 | Msa0993190 | 0.824071 | 9.845083e-54 | -8.615850e-47 |
| Msa0168310 | Msa0998870 | -0.809318 | 2.007512e-50 | -8.615850e-47 |
| Msa0168310 | Msa1032470 | 0.815874 | 7.390011e-52 | -8.615850e-47 |
| Msa0168310 | Msa1042580 | 0.814826 | 1.264247e-51 | -8.615850e-47 |
| Msa0168310 | Msa1048220 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
| Msa0168310 | Msa1057390 | 0.800127 | 1.667575e-48 | -8.615850e-47 |
| Msa0168310 | Msa1070720 | 0.810045 | 1.401084e-50 | -8.615850e-47 |
| Msa0168310 | Msa1122150 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
| Msa0168310 | Msa1129300 | -0.805668 | 1.194331e-49 | -8.615850e-47 |
| Msa0168310 | Msa1152780 | -0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0168310 | Msa1155170 | -0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0168310 | Msa1159470 | 0.806700 | 7.243173e-50 | -8.615850e-47 |
| Msa0168310 | Msa1175100 | 0.832919 | 7.181077e-56 | -8.615850e-47 |
| Msa0168310 | Msa1184230 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0168310 | Msa1190100 | -0.821132 | 4.750198e-53 | -8.615850e-47 |
| Msa0168310 | Msa1211230 | -0.839773 | 1.296448e-57 | -8.615850e-47 |
| Msa0168310 | Msa1211420 | -0.811666 | 6.246485e-51 | -8.615850e-47 |
| Msa0168310 | Msa1213890 | 0.862192 | 6.032041e-64 | -8.615850e-47 |
| Msa0168310 | Msa1213980 | 0.811296 | 7.517561e-51 | -8.615850e-47 |
| Msa0168310 | Msa1220730 | 0.821085 | 4.869456e-53 | -8.615850e-47 |
| Msa0168310 | Msa1234470 | 0.814999 | 1.157231e-51 | -8.615850e-47 |
| Msa0168310 | Msa1238660 | 0.806489 | 8.025889e-50 | -8.615850e-47 |
| Msa0168310 | Msa1254580 | 0.817128 | 3.872764e-52 | -8.615850e-47 |
| Msa0168310 | Msa1258030 | -0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0168310 | Msa1265560 | 0.815294 | 9.950621e-52 | -8.615850e-47 |
| Msa0168310 | Msa1289050 | 0.800552 | 1.366096e-48 | -8.615850e-47 |
| Msa0168310 | Msa1289090 | 0.804415 | 2.183643e-49 | -8.615850e-47 |
| Msa0168310 | Msa1297050 | -0.816714 | 4.796757e-52 | -8.615850e-47 |
| Msa0168310 | Msa1299400 | -0.844567 | 6.980900e-59 | -8.615850e-47 |
| Msa0168310 | Msa1306960 | 0.817337 | 3.474562e-52 | -8.615850e-47 |
| Msa0168310 | Msa1315480 | 0.814291 | 1.660418e-51 | -8.615850e-47 |
| Msa0168310 | Msa1317290 | -0.808822 | 2.564066e-50 | -8.615850e-47 |
| Msa0168310 | Msa1319560 | 0.805713 | 1.168979e-49 | -8.615850e-47 |
| Msa0168310 | Msa1325410 | -0.832609 | 8.572031e-56 | -8.615850e-47 |
| Msa0168310 | Msa1331050 | -0.845074 | 5.093876e-59 | -8.615850e-47 |
| Msa0168310 | Msa1334660 | 0.806526 | 7.883098e-50 | -8.615850e-47 |
| Msa0168310 | Msa1342380 | 0.808115 | 3.629155e-50 | -8.615850e-47 |
| Msa0168310 | Msa1342960 | -0.839511 | 1.516669e-57 | -8.615850e-47 |
| Msa0168310 | Msa1358500 | 0.807874 | 4.084777e-50 | -8.615850e-47 |
| Msa0168310 | Msa1363820 | -0.811856 | 5.678732e-51 | -8.615850e-47 |
| Msa0168310 | Msa1364350 | -0.874912 | 4.659739e-68 | -8.615850e-47 |
| Msa0168310 | Msa1365220 | 0.809791 | 1.588717e-50 | -8.615850e-47 |
| Msa0168310 | Msa1382380 | -0.816818 | 4.544661e-52 | -8.615850e-47 |
| Msa0168310 | Msa1384760 | -0.839674 | 1.376094e-57 | -8.615850e-47 |
| Msa0168310 | Msa1393570 | 0.822308 | 2.538970e-53 | -8.615850e-47 |
| Msa0168310 | Msa1417380 | 0.808876 | 2.497238e-50 | -8.615850e-47 |
| Msa0168310 | Msa1419690 | 0.821643 | 3.619918e-53 | -8.615850e-47 |
| Msa0168310 | Msa1445800 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa0168310 | Msa1450440 | 0.814347 | 1.613442e-51 | -8.615850e-47 |
| Msa0168310 | Msa1452710 | 0.841763 | 3.900758e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168310 | MtrunA17_Chr1g0184691 | 99.444 | 360 | 2 | 0 | 1 | 360 | 1 | 360 | 0.0 | 746 |
| Msa0168310 | MtrunA17_Chr1g0147881 | 38.580 | 324 | 137 | 9 | 38 | 350 | 47 | 319 | 3.95e-57 | 189 |
| Msa0168310 | MtrunA17_Chr4g0053281 | 56.044 | 182 | 58 | 4 | 183 | 351 | 152 | 324 | 2.16e-55 | 184 |
| Msa0168310 | MtrunA17_Chr5g0401821 | 74.074 | 108 | 26 | 2 | 245 | 351 | 151 | 257 | 4.25e-53 | 176 |
| Msa0168310 | MtrunA17_Chr4g0071521 | 63.768 | 138 | 39 | 4 | 218 | 352 | 175 | 304 | 1.01e-51 | 174 |
| Msa0168310 | MtrunA17_Chr3g0139021 | 48.466 | 163 | 72 | 5 | 205 | 359 | 222 | 380 | 2.94e-40 | 146 |
| Msa0168310 | MtrunA17_Chr7g0228941 | 59.494 | 79 | 32 | 0 | 272 | 350 | 31 | 109 | 2.12e-31 | 115 |
| Msa0168310 | MtrunA17_Chr2g0284321 | 55.682 | 88 | 38 | 1 | 268 | 354 | 9 | 96 | 1.78e-27 | 107 |
| Msa0168310 | MtrunA17_Chr2g0293481 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 5.30e-26 | 108 |
| Msa0168310 | MtrunA17_Chr8g0379461 | 52.222 | 90 | 36 | 1 | 269 | 351 | 45 | 134 | 7.39e-26 | 103 |
| Msa0168310 | MtrunA17_Chr2g0319961 | 53.191 | 94 | 28 | 2 | 269 | 351 | 50 | 138 | 1.59e-25 | 103 |
| Msa0168310 | MtrunA17_Chr2g0289181 | 61.972 | 71 | 26 | 1 | 290 | 360 | 11 | 80 | 2.35e-25 | 102 |
| Msa0168310 | MtrunA17_Chr7g0248691 | 57.831 | 83 | 30 | 1 | 268 | 350 | 134 | 211 | 4.04e-25 | 103 |
| Msa0168310 | MtrunA17_Chr8g0348311 | 57.831 | 83 | 30 | 2 | 268 | 350 | 135 | 212 | 3.08e-23 | 99.0 |
| Msa0168310 | MtrunA17_Chr7g0270051 | 50.562 | 89 | 40 | 1 | 266 | 350 | 22 | 110 | 3.95e-23 | 97.1 |
| Msa0168310 | MtrunA17_Chr1g0202461 | 66.102 | 59 | 20 | 0 | 294 | 352 | 262 | 320 | 8.75e-22 | 95.5 |
| Msa0168310 | MtrunA17_Chr8g0387501 | 54.286 | 70 | 28 | 1 | 281 | 350 | 121 | 186 | 2.47e-19 | 86.7 |
| Msa0168310 | MtrunA17_Chr3g0099641 | 51.389 | 72 | 35 | 0 | 289 | 360 | 247 | 318 | 2.94e-19 | 89.0 |
| Msa0168310 | MtrunA17_Chr3g0101131 | 58.209 | 67 | 26 | 2 | 289 | 355 | 411 | 475 | 5.64e-19 | 88.2 |
| Msa0168310 | MtrunA17_Chr5g0445311 | 59.016 | 61 | 24 | 1 | 290 | 350 | 361 | 420 | 6.74e-19 | 87.8 |
| Msa0168310 | MtrunA17_Chr4g0042831 | 46.591 | 88 | 45 | 2 | 273 | 360 | 258 | 343 | 6.82e-19 | 87.0 |
| Msa0168310 | MtrunA17_Chr5g0418191 | 34.641 | 153 | 94 | 3 | 208 | 360 | 239 | 385 | 9.22e-19 | 87.0 |
| Msa0168310 | MtrunA17_Chr5g0418191 | 53.968 | 63 | 26 | 3 | 289 | 350 | 146 | 206 | 1.21e-12 | 68.6 |
| Msa0168310 | MtrunA17_Chr7g0270191 | 44.578 | 83 | 45 | 1 | 268 | 350 | 120 | 201 | 1.02e-18 | 85.5 |
| Msa0168310 | MtrunA17_Chr7g0270831 | 44.565 | 92 | 43 | 1 | 269 | 360 | 200 | 283 | 1.09e-18 | 87.0 |
| Msa0168310 | MtrunA17_Chr1g0150281 | 47.945 | 73 | 36 | 1 | 279 | 351 | 128 | 198 | 1.66e-18 | 84.7 |
| Msa0168310 | MtrunA17_Chr4g0051181 | 57.895 | 57 | 24 | 0 | 294 | 350 | 244 | 300 | 1.89e-18 | 86.3 |
| Msa0168310 | MtrunA17_Chr7g0249301 | 45.361 | 97 | 43 | 4 | 267 | 355 | 258 | 352 | 1.97e-18 | 85.9 |
| Msa0168310 | MtrunA17_Chr7g0249301 | 54.237 | 59 | 25 | 2 | 294 | 352 | 63 | 119 | 5.33e-12 | 66.6 |
| Msa0168310 | MtrunA17_Chr7g0218081 | 59.677 | 62 | 24 | 1 | 289 | 350 | 406 | 466 | 2.37e-18 | 86.3 |
| Msa0168310 | MtrunA17_Chr7g0218081 | 53.125 | 64 | 27 | 3 | 290 | 352 | 224 | 285 | 3.10e-13 | 70.9 |
| Msa0168310 | MtrunA17_Chr2g0288871 | 47.436 | 78 | 41 | 0 | 277 | 354 | 289 | 366 | 2.62e-18 | 86.3 |
| Msa0168310 | MtrunA17_Chr7g0238921 | 49.367 | 79 | 36 | 2 | 276 | 354 | 110 | 184 | 3.14e-18 | 84.3 |
| Msa0168310 | MtrunA17_Chr3g0136961 | 55.172 | 58 | 26 | 0 | 294 | 351 | 139 | 196 | 3.67e-18 | 84.0 |
| Msa0168310 | MtrunA17_Chr4g0001361 | 43.478 | 92 | 48 | 2 | 267 | 354 | 132 | 223 | 4.84e-18 | 84.0 |
| Msa0168310 | MtrunA17_Chr4g0004911 | 49.351 | 77 | 35 | 2 | 277 | 350 | 317 | 392 | 5.52e-18 | 85.1 |
| Msa0168310 | MtrunA17_Chr4g0004911 | 50.847 | 59 | 28 | 1 | 294 | 352 | 185 | 242 | 2.86e-13 | 70.9 |
| Msa0168310 | MtrunA17_Chr2g0322391 | 47.436 | 78 | 41 | 0 | 277 | 354 | 333 | 410 | 5.87e-18 | 85.1 |
| Msa0168310 | MtrunA17_Chr7g0263531 | 57.895 | 57 | 23 | 1 | 294 | 350 | 362 | 417 | 6.23e-18 | 84.7 |
| Msa0168310 | MtrunA17_Chr7g0263531 | 52.055 | 73 | 30 | 4 | 281 | 352 | 178 | 246 | 6.89e-15 | 75.5 |
| Msa0168310 | MtrunA17_Chr4g0074001 | 57.895 | 57 | 23 | 1 | 294 | 350 | 360 | 415 | 1.47e-17 | 84.0 |
| Msa0168310 | MtrunA17_Chr4g0025061 | 57.895 | 57 | 24 | 0 | 294 | 350 | 361 | 417 | 1.86e-17 | 83.6 |
| Msa0168310 | MtrunA17_Chr7g0243891 | 33.143 | 175 | 95 | 6 | 196 | 360 | 277 | 439 | 2.39e-17 | 83.2 |
| Msa0168310 | MtrunA17_Chr7g0243891 | 52.542 | 59 | 26 | 2 | 294 | 352 | 217 | 273 | 6.05e-12 | 66.6 |
| Msa0168310 | MtrunA17_Chr5g0432161 | 36.508 | 126 | 72 | 2 | 232 | 350 | 353 | 477 | 2.76e-17 | 83.2 |
| Msa0168310 | MtrunA17_Chr5g0432161 | 52.542 | 59 | 26 | 2 | 294 | 352 | 245 | 301 | 1.27e-12 | 68.9 |
| Msa0168310 | MtrunA17_Chr3g0106491 | 48.718 | 78 | 39 | 1 | 273 | 350 | 345 | 421 | 3.30e-17 | 82.8 |
| Msa0168310 | MtrunA17_Chr3g0106491 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 3.51e-13 | 70.5 |
| Msa0168310 | MtrunA17_Chr4g0051881 | 54.839 | 62 | 26 | 2 | 294 | 355 | 179 | 238 | 3.68e-17 | 81.6 |
| Msa0168310 | MtrunA17_Chr7g0216891 | 56.140 | 57 | 25 | 0 | 294 | 350 | 220 | 276 | 4.50e-17 | 82.4 |
| Msa0168310 | MtrunA17_Chr5g0443131 | 52.239 | 67 | 31 | 1 | 294 | 360 | 158 | 223 | 5.81e-17 | 80.5 |
| Msa0168310 | MtrunA17_Chr3g0079691 | 37.500 | 112 | 57 | 3 | 251 | 350 | 441 | 551 | 5.81e-17 | 82.4 |
| Msa0168310 | MtrunA17_Chr3g0079691 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.40e-12 | 68.2 |
| Msa0168310 | MtrunA17_Chr2g0333851 | 51.667 | 60 | 29 | 0 | 291 | 350 | 167 | 226 | 7.96e-17 | 80.1 |
| Msa0168310 | MtrunA17_Chr4g0075201 | 52.308 | 65 | 28 | 1 | 294 | 358 | 268 | 329 | 8.07e-17 | 81.6 |
| Msa0168310 | MtrunA17_Chr1g0150801 | 38.384 | 99 | 58 | 2 | 252 | 350 | 63 | 158 | 9.73e-17 | 77.0 |
| Msa0168310 | MtrunA17_Chr7g0249311 | 48.780 | 82 | 37 | 3 | 277 | 355 | 373 | 452 | 1.08e-16 | 81.6 |
| Msa0168310 | MtrunA17_Chr7g0249311 | 52.542 | 59 | 26 | 2 | 294 | 352 | 180 | 236 | 3.13e-11 | 64.7 |
| Msa0168310 | MtrunA17_Chr4g0060271 | 53.448 | 58 | 27 | 0 | 294 | 351 | 256 | 313 | 1.10e-16 | 81.3 |
| Msa0168310 | MtrunA17_Chr2g0302391 | 52.459 | 61 | 29 | 0 | 294 | 354 | 212 | 272 | 1.31e-16 | 80.5 |
| Msa0168310 | MtrunA17_Chr1g0150271 | 46.970 | 66 | 34 | 1 | 291 | 356 | 99 | 163 | 5.60e-16 | 77.0 |
| Msa0168310 | MtrunA17_Chr8g0335811 | 39.583 | 96 | 52 | 3 | 268 | 360 | 126 | 218 | 6.70e-16 | 76.3 |
| Msa0168310 | MtrunA17_Chr5g0447701 | 56.897 | 58 | 24 | 1 | 294 | 351 | 253 | 309 | 6.92e-16 | 78.2 |
| Msa0168310 | MtrunA17_Chr1g0188941 | 43.182 | 88 | 45 | 3 | 268 | 355 | 29 | 111 | 7.60e-16 | 73.2 |
| Msa0168310 | MtrunA17_Chr8g0383251 | 52.459 | 61 | 28 | 1 | 290 | 350 | 105 | 164 | 1.77e-15 | 73.9 |
| Msa0168310 | MtrunA17_Chr5g0418781 | 41.860 | 86 | 49 | 1 | 268 | 353 | 99 | 183 | 1.95e-15 | 75.9 |
| Msa0168310 | MtrunA17_Chr1g0194481 | 39.759 | 83 | 49 | 1 | 268 | 350 | 133 | 214 | 2.77e-15 | 75.9 |
| Msa0168310 | MtrunA17_Chr8g0383351 | 47.619 | 63 | 32 | 1 | 289 | 351 | 156 | 217 | 2.79e-15 | 74.3 |
| Msa0168310 | MtrunA17_Chr3g0126391 | 54.386 | 57 | 24 | 1 | 294 | 348 | 134 | 190 | 5.72e-15 | 75.1 |
| Msa0168310 | MtrunA17_Chr3g0129361 | 47.619 | 63 | 32 | 1 | 289 | 351 | 140 | 201 | 6.33e-15 | 73.2 |
| Msa0168310 | MtrunA17_Chr4g0025051 | 56.604 | 53 | 23 | 0 | 298 | 350 | 340 | 392 | 9.12e-15 | 75.5 |
| Msa0168310 | MtrunA17_Chr3g0129321 | 42.500 | 80 | 45 | 1 | 271 | 350 | 96 | 174 | 4.18e-14 | 70.5 |
| Msa0168310 | MtrunA17_Chr2g0294231 | 50.877 | 57 | 27 | 1 | 294 | 350 | 204 | 259 | 4.96e-14 | 72.8 |
| Msa0168310 | MtrunA17_Chr7g0275531 | 46.429 | 84 | 41 | 3 | 269 | 348 | 92 | 175 | 1.33e-13 | 70.9 |
| Msa0168310 | MtrunA17_Chr1g0189391 | 53.846 | 65 | 28 | 2 | 290 | 353 | 94 | 157 | 1.81e-13 | 70.5 |
| Msa0168310 | MtrunA17_Chr4g0068541 | 47.368 | 57 | 29 | 1 | 294 | 350 | 209 | 264 | 2.80e-13 | 70.5 |
| Msa0168310 | MtrunA17_Chr7g0248721 | 42.500 | 80 | 41 | 3 | 274 | 350 | 119 | 196 | 4.91e-13 | 67.8 |
| Msa0168310 | MtrunA17_Chr8g0347251 | 41.860 | 86 | 47 | 2 | 266 | 348 | 108 | 193 | 6.45e-13 | 68.9 |
| Msa0168310 | MtrunA17_Chr7g0224801 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 6.70e-13 | 66.2 |
| Msa0168310 | MtrunA17_Chr8g0387981 | 41.667 | 84 | 46 | 2 | 268 | 348 | 106 | 189 | 1.30e-12 | 68.2 |
| Msa0168310 | MtrunA17_Chr6g0485431 | 30.968 | 155 | 91 | 5 | 198 | 351 | 73 | 212 | 1.64e-12 | 67.8 |
| Msa0168310 | MtrunA17_Chr5g0402931 | 51.724 | 58 | 25 | 2 | 293 | 350 | 123 | 177 | 1.75e-12 | 65.5 |
| Msa0168310 | MtrunA17_Chr4g0024391 | 46.429 | 56 | 30 | 0 | 294 | 349 | 230 | 285 | 6.96e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168310 | AT2G30590.1 | 56.104 | 385 | 131 | 15 | 1 | 356 | 1 | 376 | 3.64e-115 | 340 |
| Msa0168310 | AT3G04670.1 | 50.959 | 365 | 124 | 13 | 1 | 353 | 1 | 322 | 7.94e-104 | 309 |
| Msa0168310 | AT5G28650.1 | 47.790 | 362 | 140 | 9 | 1 | 353 | 1 | 322 | 2.23e-99 | 297 |
| Msa0168310 | AT3G04670.2 | 47.416 | 329 | 118 | 13 | 1 | 317 | 1 | 286 | 3.94e-75 | 234 |
| Msa0168310 | AT4G31550.1 | 51.087 | 184 | 60 | 6 | 180 | 350 | 137 | 303 | 1.37e-53 | 180 |
| Msa0168310 | AT4G31550.2 | 51.630 | 184 | 58 | 7 | 180 | 350 | 137 | 302 | 8.45e-53 | 177 |
| Msa0168310 | AT2G24570.1 | 56.376 | 149 | 51 | 3 | 214 | 350 | 154 | 300 | 1.11e-52 | 177 |
| Msa0168310 | AT4G24240.1 | 54.545 | 176 | 55 | 6 | 187 | 353 | 182 | 341 | 1.60e-52 | 177 |
| Msa0168310 | AT2G23320.1 | 70.000 | 110 | 29 | 2 | 245 | 351 | 190 | 298 | 1.48e-50 | 171 |
| Msa0168310 | AT1G29280.1 | 55.435 | 92 | 34 | 3 | 266 | 350 | 40 | 131 | 2.99e-27 | 108 |
| Msa0168310 | AT4G31550.3 | 44.218 | 147 | 51 | 7 | 180 | 313 | 137 | 265 | 5.17e-26 | 105 |
| Msa0168310 | AT3G58710.2 | 50.980 | 102 | 33 | 3 | 269 | 359 | 40 | 135 | 1.53e-25 | 104 |
| Msa0168310 | AT2G34830.1 | 49.524 | 105 | 47 | 2 | 257 | 356 | 174 | 277 | 2.39e-25 | 106 |
| Msa0168310 | AT4G24240.2 | 47.059 | 136 | 47 | 6 | 187 | 313 | 182 | 301 | 2.55e-25 | 104 |
| Msa0168310 | AT2G34830.2 | 49.524 | 105 | 47 | 2 | 257 | 356 | 183 | 286 | 2.78e-25 | 106 |
| Msa0168310 | AT3G58710.1 | 50.000 | 102 | 34 | 3 | 269 | 359 | 41 | 136 | 8.66e-25 | 102 |
| Msa0168310 | AT2G23320.2 | 66.667 | 72 | 20 | 2 | 245 | 313 | 190 | 260 | 9.35e-25 | 102 |
| Msa0168310 | AT4G01250.1 | 45.600 | 125 | 62 | 2 | 227 | 350 | 66 | 185 | 4.80e-24 | 100 |
| Msa0168310 | AT1G30650.1 | 52.874 | 87 | 36 | 1 | 269 | 350 | 188 | 274 | 8.54e-24 | 102 |
| Msa0168310 | AT5G52830.1 | 52.941 | 85 | 36 | 1 | 268 | 352 | 144 | 224 | 7.24e-22 | 95.5 |
| Msa0168310 | AT5G26170.1 | 52.308 | 65 | 30 | 1 | 289 | 353 | 109 | 172 | 1.18e-19 | 85.5 |
| Msa0168310 | AT4G23550.1 | 60.317 | 63 | 24 | 1 | 294 | 356 | 141 | 202 | 1.41e-19 | 88.6 |
| Msa0168310 | AT2G04880.2 | 58.209 | 67 | 27 | 1 | 288 | 354 | 278 | 343 | 3.01e-19 | 89.0 |
| Msa0168310 | AT4G18170.1 | 38.017 | 121 | 67 | 3 | 235 | 355 | 120 | 232 | 3.27e-19 | 87.4 |
| Msa0168310 | AT2G04880.1 | 58.209 | 67 | 27 | 1 | 288 | 354 | 302 | 367 | 3.45e-19 | 89.0 |
| Msa0168310 | AT5G07100.2 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.12e-18 | 84.0 |
| Msa0168310 | AT5G07100.2 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| Msa0168310 | AT5G07100.4 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.12e-18 | 84.0 |
| Msa0168310 | AT5G07100.4 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| Msa0168310 | AT5G07100.5 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.12e-18 | 84.0 |
| Msa0168310 | AT5G07100.5 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| Msa0168310 | AT5G07100.3 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.12e-18 | 84.0 |
| Msa0168310 | AT5G07100.3 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| Msa0168310 | AT1G13960.2 | 47.436 | 78 | 40 | 1 | 273 | 350 | 236 | 312 | 2.46e-18 | 85.5 |
| Msa0168310 | AT1G13960.2 | 56.452 | 62 | 24 | 3 | 290 | 350 | 72 | 131 | 2.11e-14 | 73.9 |
| Msa0168310 | AT2G38470.1 | 59.016 | 61 | 24 | 1 | 290 | 350 | 359 | 418 | 2.52e-18 | 86.7 |
| Msa0168310 | AT2G38470.1 | 54.237 | 59 | 25 | 2 | 294 | 352 | 185 | 241 | 3.44e-13 | 70.9 |
| Msa0168310 | AT4G26640.5 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 2.98e-18 | 85.5 |
| Msa0168310 | AT4G26640.6 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 2.98e-18 | 85.5 |
| Msa0168310 | AT4G26640.4 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 2.98e-18 | 85.5 |
| Msa0168310 | AT4G26640.3 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 2.98e-18 | 85.5 |
| Msa0168310 | AT4G04450.2 | 47.561 | 82 | 40 | 1 | 277 | 358 | 182 | 260 | 3.48e-18 | 85.9 |
| Msa0168310 | AT5G07100.1 | 48.837 | 86 | 41 | 3 | 270 | 355 | 212 | 294 | 4.13e-18 | 84.3 |
| Msa0168310 | AT5G07100.1 | 48.529 | 68 | 31 | 2 | 285 | 352 | 112 | 175 | 2.72e-12 | 67.4 |
| Msa0168310 | AT1G13960.1 | 44.211 | 95 | 39 | 2 | 269 | 350 | 372 | 465 | 4.29e-18 | 85.9 |
| Msa0168310 | AT1G13960.1 | 48.101 | 79 | 32 | 4 | 272 | 350 | 215 | 284 | 3.12e-14 | 74.3 |
| Msa0168310 | AT4G04450.1 | 47.561 | 82 | 40 | 1 | 277 | 358 | 276 | 354 | 4.39e-18 | 85.9 |
| Msa0168310 | AT4G26640.1 | 56.716 | 67 | 27 | 2 | 289 | 355 | 305 | 369 | 5.15e-18 | 85.5 |
| Msa0168310 | AT4G26640.2 | 56.716 | 67 | 27 | 2 | 289 | 355 | 377 | 441 | 5.77e-18 | 85.5 |
| Msa0168310 | AT1G68150.1 | 57.895 | 57 | 24 | 0 | 294 | 350 | 236 | 292 | 5.85e-18 | 84.7 |
| Msa0168310 | AT4G26640.7 | 56.716 | 67 | 27 | 2 | 289 | 355 | 337 | 401 | 5.91e-18 | 85.5 |
| Msa0168310 | AT5G45050.2 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1131 | 1209 | 7.09e-18 | 85.9 |
| Msa0168310 | AT5G45050.1 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1159 | 1237 | 7.87e-18 | 85.9 |
| Msa0168310 | AT5G45050.4 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1020 | 1098 | 8.56e-18 | 85.5 |
| Msa0168310 | AT1G62300.1 | 44.186 | 86 | 40 | 1 | 269 | 354 | 296 | 373 | 1.79e-17 | 84.0 |
| Msa0168310 | AT4G22070.4 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.28e-17 | 84.0 |
| Msa0168310 | AT4G22070.3 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.28e-17 | 84.0 |
| Msa0168310 | AT4G22070.2 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.28e-17 | 84.0 |
| Msa0168310 | AT4G22070.1 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.28e-17 | 84.0 |
| Msa0168310 | AT1G29860.1 | 44.595 | 74 | 40 | 1 | 277 | 350 | 120 | 192 | 2.62e-17 | 81.6 |
| Msa0168310 | AT2G03340.1 | 46.154 | 78 | 41 | 1 | 273 | 350 | 395 | 471 | 2.88e-17 | 83.6 |
| Msa0168310 | AT2G03340.1 | 55.556 | 63 | 25 | 3 | 289 | 350 | 245 | 305 | 9.08e-14 | 72.8 |
| Msa0168310 | AT5G49520.1 | 56.140 | 57 | 24 | 1 | 294 | 350 | 222 | 277 | 2.94e-17 | 82.8 |
| Msa0168310 | AT4G01720.1 | 55.738 | 61 | 27 | 0 | 294 | 354 | 240 | 300 | 3.39e-17 | 83.2 |
| Msa0168310 | AT4G30935.1 | 56.140 | 57 | 24 | 1 | 294 | 350 | 332 | 387 | 3.61e-17 | 82.8 |
| Msa0168310 | AT5G15130.2 | 55.172 | 58 | 26 | 0 | 294 | 351 | 186 | 243 | 5.91e-17 | 82.4 |
| Msa0168310 | AT5G15130.1 | 55.172 | 58 | 26 | 0 | 294 | 351 | 228 | 285 | 6.12e-17 | 82.4 |
| Msa0168310 | AT4G31800.2 | 41.096 | 73 | 43 | 0 | 278 | 350 | 96 | 168 | 1.49e-16 | 78.6 |
| Msa0168310 | AT5G56270.1 | 49.351 | 77 | 35 | 2 | 277 | 350 | 468 | 543 | 1.55e-16 | 81.6 |
| Msa0168310 | AT5G56270.1 | 50.820 | 61 | 28 | 2 | 294 | 354 | 274 | 332 | 4.68e-11 | 64.7 |
| Msa0168310 | AT3G01080.1 | 47.436 | 78 | 40 | 1 | 273 | 350 | 286 | 362 | 1.93e-16 | 80.5 |
| Msa0168310 | AT3G01080.1 | 51.562 | 64 | 28 | 3 | 290 | 352 | 163 | 224 | 6.32e-13 | 70.1 |
| Msa0168310 | AT3G01080.2 | 47.436 | 78 | 40 | 1 | 273 | 350 | 324 | 400 | 1.97e-16 | 80.9 |
| Msa0168310 | AT3G01080.2 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 6.60e-13 | 70.1 |
| Msa0168310 | AT2G37260.3 | 43.137 | 102 | 52 | 2 | 249 | 350 | 230 | 325 | 2.19e-16 | 79.7 |
| Msa0168310 | AT2G37260.3 | 54.237 | 59 | 25 | 2 | 294 | 352 | 86 | 142 | 1.05e-12 | 68.9 |
| Msa0168310 | AT2G37260.2 | 43.137 | 102 | 52 | 2 | 249 | 350 | 228 | 323 | 2.19e-16 | 79.7 |
| Msa0168310 | AT2G37260.2 | 54.237 | 59 | 25 | 2 | 294 | 352 | 84 | 140 | 1.04e-12 | 68.9 |
| Msa0168310 | AT4G31800.1 | 41.096 | 73 | 43 | 0 | 278 | 350 | 161 | 233 | 2.36e-16 | 79.3 |
| Msa0168310 | AT2G40740.1 | 40.426 | 94 | 53 | 2 | 259 | 349 | 138 | 231 | 2.54e-16 | 79.0 |
| Msa0168310 | AT2G37260.1 | 43.137 | 102 | 52 | 2 | 249 | 350 | 310 | 405 | 3.03e-16 | 80.1 |
| Msa0168310 | AT2G37260.1 | 54.237 | 59 | 25 | 2 | 294 | 352 | 166 | 222 | 1.01e-12 | 69.3 |
| Msa0168310 | AT4G39410.1 | 41.860 | 86 | 46 | 2 | 269 | 351 | 196 | 280 | 3.78e-16 | 78.6 |
| Msa0168310 | AT2G40740.3 | 40.860 | 93 | 52 | 2 | 259 | 348 | 147 | 239 | 3.80e-16 | 78.6 |
| Msa0168310 | AT5G45260.1 | 46.237 | 93 | 38 | 4 | 269 | 356 | 1187 | 1272 | 3.94e-16 | 80.5 |
| Msa0168310 | AT5G43290.1 | 49.367 | 79 | 36 | 2 | 276 | 354 | 100 | 174 | 4.11e-16 | 78.2 |
| Msa0168310 | AT2G47260.1 | 40.964 | 83 | 48 | 1 | 268 | 350 | 149 | 230 | 8.31e-16 | 77.8 |
| Msa0168310 | AT5G46350.1 | 51.613 | 62 | 28 | 2 | 294 | 355 | 184 | 243 | 1.12e-15 | 77.4 |
| Msa0168310 | AT4G26440.1 | 46.914 | 81 | 41 | 2 | 274 | 354 | 353 | 431 | 1.15e-15 | 78.6 |
| Msa0168310 | AT4G26440.1 | 51.562 | 64 | 28 | 3 | 292 | 354 | 176 | 237 | 1.82e-11 | 65.9 |
| Msa0168310 | AT1G69310.4 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.20e-15 | 77.0 |
| Msa0168310 | AT1G69310.2 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.20e-15 | 77.0 |
| Msa0168310 | AT1G69310.1 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.20e-15 | 77.0 |
| Msa0168310 | AT3G62340.1 | 43.902 | 82 | 45 | 1 | 271 | 352 | 96 | 176 | 1.44e-15 | 76.6 |
| Msa0168310 | AT2G44745.1 | 38.298 | 94 | 52 | 3 | 270 | 360 | 119 | 209 | 1.55e-15 | 75.1 |
| Msa0168310 | AT1G80840.1 | 36.975 | 119 | 62 | 4 | 245 | 350 | 85 | 203 | 1.67e-15 | 76.6 |
| Msa0168310 | AT1G18860.1 | 54.386 | 57 | 26 | 0 | 294 | 350 | 240 | 296 | 1.90e-15 | 77.8 |
| Msa0168310 | AT1G55600.1 | 50.725 | 69 | 30 | 2 | 290 | 358 | 304 | 368 | 1.95e-15 | 77.8 |
| Msa0168310 | AT1G69810.1 | 46.988 | 83 | 35 | 2 | 269 | 350 | 187 | 261 | 4.28e-15 | 76.3 |
| Msa0168310 | AT1G69810.2 | 46.988 | 83 | 35 | 2 | 269 | 350 | 129 | 203 | 4.70e-15 | 75.9 |
| Msa0168310 | AT2G21900.1 | 56.140 | 57 | 24 | 1 | 294 | 350 | 110 | 165 | 6.23e-15 | 73.2 |
| Msa0168310 | AT2G25000.2 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.32e-15 | 73.9 |
| Msa0168310 | AT2G25000.4 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.32e-15 | 73.9 |
| Msa0168310 | AT5G41570.1 | 43.529 | 85 | 44 | 2 | 269 | 350 | 71 | 154 | 7.51e-15 | 72.4 |
| Msa0168310 | AT5G64810.1 | 49.180 | 61 | 30 | 1 | 290 | 350 | 107 | 166 | 1.06e-14 | 72.4 |
| Msa0168310 | AT2G25000.3 | 49.123 | 57 | 29 | 0 | 294 | 350 | 126 | 182 | 1.21e-14 | 73.2 |
| Msa0168310 | AT2G25000.1 | 49.123 | 57 | 29 | 0 | 294 | 350 | 147 | 203 | 1.44e-14 | 73.6 |
| Msa0168310 | AT2G46130.1 | 50.000 | 62 | 30 | 1 | 289 | 350 | 26 | 86 | 2.07e-14 | 69.3 |
| Msa0168310 | AT1G64000.1 | 38.095 | 84 | 51 | 1 | 267 | 350 | 88 | 170 | 2.32e-14 | 71.2 |
| Msa0168310 | AT2G30250.1 | 42.857 | 84 | 43 | 4 | 275 | 355 | 307 | 388 | 3.78e-14 | 73.6 |
| Msa0168310 | AT3G01970.1 | 47.619 | 63 | 32 | 1 | 289 | 351 | 61 | 122 | 9.85e-14 | 68.6 |
| Msa0168310 | AT3G01080.3 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 4.61e-13 | 69.7 |
| Msa0168310 | AT5G13080.1 | 45.161 | 62 | 33 | 1 | 289 | 350 | 63 | 123 | 7.61e-13 | 65.9 |
| Msa0168310 | AT4G11070.1 | 36.975 | 119 | 63 | 3 | 233 | 348 | 89 | 198 | 1.83e-12 | 67.8 |
| Msa0168310 | AT4G11070.2 | 36.975 | 119 | 63 | 3 | 233 | 348 | 57 | 166 | 2.05e-12 | 67.4 |
| Msa0168310 | AT4G23810.1 | 45.882 | 85 | 43 | 2 | 268 | 349 | 132 | 216 | 4.64e-12 | 66.6 |
| Msa0168310 | AT1G69310.3 | 38.824 | 85 | 47 | 2 | 269 | 353 | 123 | 202 | 1.95e-11 | 64.3 |
| Msa0168310 | AT4G12020.6 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.01e-11 | 63.9 |
| Msa0168310 | AT4G12020.8 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.01e-11 | 63.9 |
| Msa0168310 | AT1G66560.1 | 47.458 | 59 | 29 | 1 | 292 | 348 | 102 | 160 | 9.28e-11 | 62.0 |
Find 110 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGGGTTCTCTAAATTAA+TGG | 0.160115 | 1_4:+50820461 | Msa0168310:three_prime_UTR |
| TGGAAATTGTCTTCGGAAAA+TGG | 0.189556 | 1_4:+50820481 | Msa0168310:three_prime_UTR |
| AGTATGTTATTAAACATTTC+AGG | 0.193089 | 1_4:+50820444 | Msa0168310:three_prime_UTR |
| CAAGAGAAAGTGGATTTCTT+AGG | 0.196128 | 1_4:-50818847 | None:intergenic |
| TAGAAAGAGGGAGGCTAAAA+TGG | 0.237006 | 1_4:+50818493 | Msa0168310:exon |
| CATGCAGTTCATGCATTTGC+AGG | 0.256684 | 1_4:-50820199 | None:intergenic |
| TTCTCTTGGAAACCCTTCTT+TGG | 0.278708 | 1_4:+50818862 | Msa0168310:CDS |
| AAAGTTGTGTCTTTGCTTCA+TGG | 0.278912 | 1_4:+50818650 | Msa0168310:CDS |
| TAGTAGCCTTGTCAAAATTA+AGG | 0.303036 | 1_4:-50819087 | None:intergenic |
| AGTGCTGGAGTATGTAAAAT+TGG | 0.339279 | 1_4:+50820384 | Msa0168310:three_prime_UTR |
| TAGAGTGAAGAGATCAATTA+AGG | 0.339973 | 1_4:+50819431 | Msa0168310:CDS |
| CAAAATTCAGTTCAGGAACT+TGG | 0.342737 | 1_4:+50818818 | Msa0168310:CDS |
| AACAACAGCAACAAGATTCT+AGG | 0.351494 | 1_4:+50818032 | Msa0168310:five_prime_UTR |
| GGAAGTTCCTTCCATTTGAT+TGG | 0.353546 | 1_4:+50819187 | Msa0168310:CDS |
| TGTGTCTTTGCTTCATGGTT+TGG | 0.359375 | 1_4:+50818655 | Msa0168310:CDS |
| GTTTGGATCATTCAAGAGTT+AGG | 0.362142 | 1_4:+50818672 | Msa0168310:CDS |
| AAGAAAGCAGTTTGAGGATA+AGG | 0.371998 | 1_4:-50818719 | None:intergenic |
| CTAAGAAATCCACTTTCTCT+TGG | 0.374963 | 1_4:+50818848 | Msa0168310:CDS |
| AGGAATTTAACTGTTGAAAC+TGG | 0.385192 | 1_4:+50818605 | Msa0168310:CDS |
| GTGATTATGCTCGCCTTCAT+AGG | 0.392014 | 1_4:-50820158 | None:intergenic |
| TGCTGTTGTTGATGTTTCCA+TGG | 0.402615 | 1_4:-50818019 | None:intergenic |
| CTATGATGAACTTGATCCCT+TGG | 0.403158 | 1_4:-50818584 | None:intergenic |
| TGTGAAGACCTCTATGTGAT+TGG | 0.408353 | 1_4:+50820242 | Msa0168310:three_prime_UTR |
| CAAGGGATCAAGTTCATCAT+AGG | 0.426159 | 1_4:+50818585 | Msa0168310:CDS |
| TTATGCCGCTGGTGTTCCTT+CGG | 0.429874 | 1_4:-50819063 | None:intergenic |
| TTTGAACTCAATTCCAAAGA+AGG | 0.431276 | 1_4:-50818875 | None:intergenic |
| CTATCCTCAAAATTCAGTTC+AGG | 0.434300 | 1_4:+50818811 | Msa0168310:CDS |
| TTGGGGAGTCGTTTATTTAG+AGG | 0.434562 | 1_4:+50820339 | Msa0168310:three_prime_UTR |
| CACCAACAATGTCGTCTACT+AGG | 0.435790 | 1_4:+50819116 | Msa0168310:CDS |
| CTTTGGAATTGAGTTCAAAC+GGG | 0.435936 | 1_4:+50818879 | Msa0168310:CDS |
| AAGAGAAAGTGGATTTCTTA+GGG | 0.437226 | 1_4:-50818846 | None:intergenic |
| CTCTCAACATGCTTCCTAGC+AGG | 0.437995 | 1_4:-50820103 | None:intergenic |
| AAATTAATGGAAATTGTCTT+CGG | 0.444249 | 1_4:+50820474 | Msa0168310:three_prime_UTR |
| TTTGGGTAGTAGCTTGGTTG+GGG | 0.445798 | 1_4:+50820322 | Msa0168310:three_prime_UTR |
| TAGGTAACCATTAGCATAGT+AGG | 0.453570 | 1_4:-50820139 | None:intergenic |
| GGGTGAGGAGAGCCCTTGAT+AGG | 0.454162 | 1_4:-50819525 | None:intergenic |
| TGCAGGTTGTGTTGGTACCT+TGG | 0.458215 | 1_4:-50820182 | None:intergenic |
| AGAAAGCAGTTTGAGGATAA+GGG | 0.460093 | 1_4:-50818718 | None:intergenic |
| TGGGGAGTCGTTTATTTAGA+GGG | 0.465245 | 1_4:+50820340 | Msa0168310:three_prime_UTR |
| AGATCGGAGCTCCAATCAAA+TGG | 0.468483 | 1_4:-50819198 | None:intergenic |
| ATGCTAATGGTTACCTATGA+AGG | 0.471493 | 1_4:+50820145 | Msa0168310:CDS |
| TTCCTCCATGAGTAATCATC+AGG | 0.472648 | 1_4:-50819489 | None:intergenic |
| GCATGAGAGGCTGCCCTGCT+AGG | 0.472837 | 1_4:+50820089 | Msa0168310:CDS |
| TCTTTGGAATTGAGTTCAAA+CGG | 0.478409 | 1_4:+50818878 | Msa0168310:CDS |
| GAGATTGAAGGTGTGAAGAG+AGG | 0.479104 | 1_4:-50817992 | None:intergenic |
| GGATGAGCCTACTATGCTAA+TGG | 0.481224 | 1_4:+50820132 | Msa0168310:CDS |
| TTTGTTGCTGCAGCTGCTGT+TGG | 0.487273 | 1_4:-50818979 | None:intergenic |
| AAAATTAAGGCTTATGCCGC+TGG | 0.488025 | 1_4:-50819074 | None:intergenic |
| TTCCATGGGTTTGAGATTGA+AGG | 0.488676 | 1_4:-50818004 | None:intergenic |
| GAAGGGTTTCCAAGAGAAAG+TGG | 0.494949 | 1_4:-50818857 | None:intergenic |
| GCAAGCTTGTTGCTGATAGC+AGG | 0.495556 | 1_4:-50819456 | None:intergenic |
| CAACCAAGCTACTACCCAAA+AGG | 0.497245 | 1_4:-50820319 | None:intergenic |
| GATTACTCATGGAGGAAGTA+CGG | 0.498681 | 1_4:+50819495 | Msa0168310:CDS |
| GTATGTTATTAAACATTTCA+GGG | 0.504251 | 1_4:+50820445 | Msa0168310:three_prime_UTR |
| GTATTCTTATGTGTGTGTGA+TGG | 0.508109 | 1_4:+50817941 | Msa0168310:five_prime_UTR |
| TTGAACTCAATTCCAAAGAA+GGG | 0.509941 | 1_4:-50818874 | None:intergenic |
| GTACGGGCAGAAGCCTATCA+AGG | 0.510514 | 1_4:+50819512 | Msa0168310:CDS |
| CATGCATTTGCAGGTTGTGT+TGG | 0.511678 | 1_4:-50820190 | None:intergenic |
| GCTGTTGTTGATGTTTCCAT+GGG | 0.514488 | 1_4:-50818018 | None:intergenic |
| GACCTAGTAGACGACATTGT+TGG | 0.517470 | 1_4:-50819118 | None:intergenic |
| AAGGTGTGAAGAGAGGACTT+TGG | 0.523425 | 1_4:-50817985 | None:intergenic |
| AAACTGGTGAAGCTGTGAAT+AGG | 0.523498 | 1_4:+50818621 | Msa0168310:CDS |
| GTCTTCACAAATAGAATGAC+GGG | 0.526956 | 1_4:-50820228 | None:intergenic |
| ATTACCTCTTCTTTGAGCAA+TGG | 0.528866 | 1_4:-50819306 | None:intergenic |
| GAGGGAGTGATGAAGATCAC+TGG | 0.535239 | 1_4:+50820358 | Msa0168310:three_prime_UTR |
| TGACAACAACAACTTCATCA+AGG | 0.535436 | 1_4:+50818058 | Msa0168310:five_prime_UTR |
| TTGTCTAAGAAAGCAGTTTG+AGG | 0.538734 | 1_4:-50818725 | None:intergenic |
| ACAACAGCAACAAGATTCTA+GGG | 0.538954 | 1_4:+50818033 | Msa0168310:five_prime_UTR |
| TCCCTCCTGATGATTACTCA+TGG | 0.545497 | 1_4:+50819484 | Msa0168310:CDS |
| GAAGATCACTGGTTTAGTGC+TGG | 0.550783 | 1_4:+50820369 | Msa0168310:three_prime_UTR |
| GGAAGCGTGGCTAACGTGGA+TGG | 0.552072 | 1_4:+50819166 | Msa0168310:CDS |
| AATGCCATTGCTCAAAGAAG+AGG | 0.554797 | 1_4:+50819302 | Msa0168310:CDS |
| ATATTTCAAGTGATGCGAGC+AGG | 0.556506 | 1_4:+50820283 | Msa0168310:three_prime_UTR |
| ATTTCCTCCTTGAGCATAGA+CGG | 0.557646 | 1_4:+50819145 | Msa0168310:CDS |
| ATTACTCATGGAGGAAGTAC+GGG | 0.557772 | 1_4:+50819496 | Msa0168310:CDS |
| GAATTCTGATCTGAAGAGAT+CGG | 0.560341 | 1_4:-50819214 | None:intergenic |
| CACGCTTCCGTCTATGCTCA+AGG | 0.561562 | 1_4:-50819152 | None:intergenic |
| AGACGGAAGCGTGGCTAACG+TGG | 0.565434 | 1_4:+50819162 | Msa0168310:CDS |
| CACCTTCAATCTCAAACCCA+TGG | 0.573317 | 1_4:+50818002 | Msa0168310:five_prime_UTR |
| TCTCAACATGCTTCCTAGCA+GGG | 0.575418 | 1_4:-50820102 | None:intergenic |
| TCAAGGGCTCTCCTCACCCT+AGG | 0.577561 | 1_4:+50819529 | Msa0168310:CDS |
| ATGTTCTGCTAGAGGTGATG+AGG | 0.577879 | 1_4:+50819252 | Msa0168310:CDS |
| TATAAGTGCAGCAGCATGAG+AGG | 0.580000 | 1_4:+50820076 | Msa0168310:CDS |
| ATCAGAATTCACAGCACAAG+AGG | 0.581042 | 1_4:+50819227 | Msa0168310:CDS |
| TGCTATCAGCAACAAGCTTG+CGG | 0.581834 | 1_4:+50819458 | Msa0168310:CDS |
| CGGAGCTCCAATCAAATGGA+AGG | 0.586112 | 1_4:-50819194 | None:intergenic |
| GAAGCATGTTGAGAGGTGCT+TGG | 0.586233 | 1_4:+50820111 | Msa0168310:CDS |
| GCTTGTTGAGCAAGGTGAAG+CGG | 0.587298 | 1_4:-50818908 | None:intergenic |
| AAGTATGTTGTCTCAACCAA+GGG | 0.593996 | 1_4:+50818568 | Msa0168310:CDS |
| CTCCATGAGTAATCATCAGG+AGG | 0.604331 | 1_4:-50819486 | None:intergenic |
| CTGCAAATGCATGAACTGCA+TGG | 0.609869 | 1_4:+50820200 | Msa0168310:exon |
| GGTCTTCACAAATAGAATGA+CGG | 0.611645 | 1_4:-50820229 | None:intergenic |
| TAAGTATGTTGTCTCAACCA+AGG | 0.618261 | 1_4:+50818567 | Msa0168310:CDS |
| AACAGCAGCTGCAGCAACAA+AGG | 0.622186 | 1_4:+50818981 | Msa0168310:CDS |
| TGTTCTGCTAGAGGTGATGA+GGG | 0.623984 | 1_4:+50819253 | Msa0168310:CDS |
| AAGCTGAAATGATGTTCCGA+AGG | 0.624862 | 1_4:+50819047 | Msa0168310:CDS |
| AAGAGGAAATGTTCTGCTAG+AGG | 0.625674 | 1_4:+50819244 | Msa0168310:CDS |
| TTGATGCAGCTTGTTGAGCA+AGG | 0.628338 | 1_4:-50818916 | None:intergenic |
| TCCATGAGTAATCATCAGGA+GGG | 0.631195 | 1_4:-50819485 | None:intergenic |
| ATCTCAAGCCAATCACATAG+AGG | 0.631648 | 1_4:-50820250 | None:intergenic |
| GGTTGGACATACCTAGGGTG+AGG | 0.641458 | 1_4:-50819540 | None:intergenic |
| TACGGGCAGAAGCCTATCAA+GGG | 0.654538 | 1_4:+50819513 | Msa0168310:CDS |
| CTTGAGCATAGACGGAAGCG+TGG | 0.674043 | 1_4:+50819153 | Msa0168310:CDS |
| AGGCGAGCATAATCACGCCA+AGG | 0.679418 | 1_4:+50820165 | Msa0168310:CDS |
| ACACACACATAAGAATACAA+AGG | 0.680874 | 1_4:-50817936 | None:intergenic |
| CTCCTGATGATTACTCATGG+AGG | 0.692245 | 1_4:+50819487 | Msa0168310:CDS |
| TGGTGATGATGCTGTTGCTG+CGG | 0.703851 | 1_4:-50818959 | None:intergenic |
| CTGCTAGGAAGCATGTTGAG+AGG | 0.707257 | 1_4:+50820104 | Msa0168310:CDS |
| ATGTTCCGAAGGAACACCAG+CGG | 0.729358 | 1_4:+50819058 | Msa0168310:CDS |
| GCTTCCGTCTATGCTCAAGG+AGG | 0.768540 | 1_4:-50819149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATATCATATTACAA+TGG | - | chr1_4:50819386-50819405 | None:intergenic | 10.0% |
| !!! | AAATAAAAATCCTATTTTTG+CGG | + | chr1_4:50818285-50818304 | Msa0168310:intron | 15.0% |
| !!! | ATTTTTTTATAGATAGAAAG+AGG | + | chr1_4:50818480-50818499 | Msa0168310:intron | 15.0% |
| !!! | TTTTTTTATAGATAGAAAGA+GGG | + | chr1_4:50818481-50818500 | Msa0168310:intron | 15.0% |
| !!! | TTATTTTTTGCTTGTTTCTT+AGG | + | chr1_4:50817876-50817895 | Msa0168310:five_prime_UTR | 20.0% |
| !!! | TTTTTTTGTCACATGAAAAT+TGG | + | chr1_4:50818112-50818131 | Msa0168310:intron | 20.0% |
| !!! | TTTTTTGTCACATGAAAATT+GGG | + | chr1_4:50818113-50818132 | Msa0168310:intron | 20.0% |
| !!! | CTTTTTAATGTAATGTTGAA+AGG | + | chr1_4:50818167-50818186 | Msa0168310:intron | 20.0% |
| !!! | GTTAATTTCTGTTACTTTAA+AGG | + | chr1_4:50819351-50819370 | Msa0168310:intron | 20.0% |
| !! | TTAAATCTCAAATAGCAAAA+CGG | - | chr1_4:50819564-50819583 | None:intergenic | 20.0% |
| !!! | AATTTTATTGATTCGATTCA+AGG | + | chr1_4:50819582-50819601 | Msa0168310:intron | 20.0% |
| !! | TGTAATGAAAATTACAAACA+TGG | - | chr1_4:50819832-50819851 | None:intergenic | 20.0% |
| !!! | CATGTTCAAGTTAAAAAAAA+GGG | - | chr1_4:50819888-50819907 | None:intergenic | 20.0% |
| !!! | ACATGTTCAAGTTAAAAAAA+AGG | - | chr1_4:50819889-50819908 | None:intergenic | 20.0% |
| !! | AGTATGTTATTAAACATTTC+AGG | + | chr1_4:50820444-50820463 | Msa0168310:three_prime_UTR | 20.0% |
| !! | GTATGTTATTAAACATTTCA+GGG | + | chr1_4:50820445-50820464 | Msa0168310:three_prime_UTR | 20.0% |
| !! | AAATTAATGGAAATTGTCTT+CGG | + | chr1_4:50820474-50820493 | Msa0168310:three_prime_UTR | 20.0% |
| !!! | GTACTTTGATGTTTTTTTGT+TGG | + | chr1_4:50818088-50818107 | Msa0168310:intron | 25.0% |
| ! | TATTACTTGATTCTGATTCA+TGG | + | chr1_4:50818193-50818212 | Msa0168310:intron | 25.0% |
| ! | ATTACTTGATTCTGATTCAT+GGG | + | chr1_4:50818194-50818213 | Msa0168310:intron | 25.0% |
| !!! | AATGGGATTTTTTTTTCATC+TGG | + | chr1_4:50818325-50818344 | Msa0168310:intron | 25.0% |
| !!! | ATGGGATTTTTTTTTCATCT+GGG | + | chr1_4:50818326-50818345 | Msa0168310:intron | 25.0% |
| ! | ATCAATGTCTGATATATTTG+TGG | + | chr1_4:50818371-50818390 | Msa0168310:intron | 25.0% |
| !! | TGATGTTTCTTTTGCAATTT+GGG | - | chr1_4:50818751-50818770 | None:intergenic | 25.0% |
| !! | ATGATGTTTCTTTTGCAATT+TGG | - | chr1_4:50818752-50818771 | None:intergenic | 25.0% |
| !! | TTGAGTAAAGTGAACATTTT+TGG | - | chr1_4:50818786-50818805 | None:intergenic | 25.0% |
| !! | TCTAATGGTTGATACATTAA+TGG | + | chr1_4:50819329-50819348 | Msa0168310:intron | 25.0% |
| ! | AAAATTATTTAAATCCCCAC+AGG | - | chr1_4:50819752-50819771 | None:intergenic | 25.0% |
| !! | TGTGGGGATTTAAATAATTT+TGG | + | chr1_4:50819751-50819770 | Msa0168310:intron | 25.0% |
| !!! | AAATAATTTTGGTCTATGTG+TGG | + | chr1_4:50819762-50819781 | Msa0168310:intron | 25.0% |
| ! | TGGATATGTAATATGTTGAT+TGG | + | chr1_4:50819782-50819801 | Msa0168310:intron | 25.0% |
| ! | AAAATTACAAACATGGACAA+AGG | - | chr1_4:50819825-50819844 | None:intergenic | 25.0% |
| ! | TGACAATAATGTGACAATAA+TGG | - | chr1_4:50819962-50819981 | None:intergenic | 25.0% |
| ! | CATTATTGTCAATCAAATGA+AGG | + | chr1_4:50819971-50819990 | Msa0168310:intron | 25.0% |
| ACACACACATAAGAATACAA+AGG | - | chr1_4:50817939-50817958 | None:intergenic | 30.0% | |
| TTCAGTTCATGAGAAGATAA+AGG | - | chr1_4:50818246-50818265 | None:intergenic | 30.0% | |
| TTCATTGTCTGGTGAAAAAT+GGG | + | chr1_4:50818308-50818327 | Msa0168310:intron | 30.0% | |
| ! | GAGATGCTTTCTTTGTATTT+TGG | + | chr1_4:50818400-50818419 | Msa0168310:intron | 30.0% |
| ! | TTTTATAGATAGAAAGAGGG+AGG | + | chr1_4:50818484-50818503 | Msa0168310:intron | 30.0% |
| AGGAATTTAACTGTTGAAAC+TGG | + | chr1_4:50818605-50818624 | Msa0168310:CDS | 30.0% | |
| ! | AAGAGAAAGTGGATTTCTTA+GGG | - | chr1_4:50818849-50818868 | None:intergenic | 30.0% |
| TTGAACTCAATTCCAAAGAA+GGG | - | chr1_4:50818877-50818896 | None:intergenic | 30.0% | |
| TTTGAACTCAATTCCAAAGA+AGG | - | chr1_4:50818878-50818897 | None:intergenic | 30.0% | |
| !! | TCTTTGGAATTGAGTTCAAA+CGG | + | chr1_4:50818878-50818897 | Msa0168310:CDS | 30.0% |
| !! | CATAAGCCTTAATTTTGACA+AGG | + | chr1_4:50819081-50819100 | Msa0168310:CDS | 30.0% |
| !! | TAGTAGCCTTGTCAAAATTA+AGG | - | chr1_4:50819090-50819109 | None:intergenic | 30.0% |
| CAAAGAAGAGGTAATTCTAA+TGG | + | chr1_4:50819314-50819333 | Msa0168310:intron | 30.0% | |
| TAGAGTGAAGAGATCAATTA+AGG | + | chr1_4:50819431-50819450 | Msa0168310:CDS | 30.0% | |
| !! | AACTATTTTGTTATGCTGCT+TGG | + | chr1_4:50819657-50819676 | Msa0168310:intron | 30.0% |
| GAGCATCAAAATTGCAAAAT+CGG | - | chr1_4:50819920-50819939 | None:intergenic | 30.0% | |
| !! | TTTTGCAATTTTGATGCTCT+AGG | + | chr1_4:50819921-50819940 | Msa0168310:intron | 30.0% |
| !! | TGTCTTGATTTTGTTTCTTC+AGG | + | chr1_4:50820047-50820066 | Msa0168310:intron | 30.0% |
| !! | GTCTTGATTTTGTTTCTTCA+GGG | + | chr1_4:50820048-50820067 | Msa0168310:intron | 30.0% |
| !! | TCTTGATTTTGTTTCTTCAG+GGG | + | chr1_4:50820049-50820068 | Msa0168310:intron | 30.0% |
| TTCAGGGTTCTCTAAATTAA+TGG | + | chr1_4:50820461-50820480 | Msa0168310:three_prime_UTR | 30.0% | |
| GTATTCTTATGTGTGTGTGA+TGG | + | chr1_4:50817941-50817960 | Msa0168310:five_prime_UTR | 35.0% | |
| AACAACAGCAACAAGATTCT+AGG | + | chr1_4:50818032-50818051 | Msa0168310:five_prime_UTR | 35.0% | |
| ACAACAGCAACAAGATTCTA+GGG | + | chr1_4:50818033-50818052 | Msa0168310:five_prime_UTR | 35.0% | |
| TGACAACAACAACTTCATCA+AGG | + | chr1_4:50818058-50818077 | Msa0168310:five_prime_UTR | 35.0% | |
| AGACAATGAACCGCAAAAAT+AGG | - | chr1_4:50818298-50818317 | None:intergenic | 35.0% | |
| !! | TATTTTTGCGGTTCATTGTC+TGG | + | chr1_4:50818297-50818316 | Msa0168310:intron | 35.0% |
| GTTCATTGTCTGGTGAAAAA+TGG | + | chr1_4:50818307-50818326 | Msa0168310:intron | 35.0% | |
| !! | CTTCTTTTGATTCAGGAACT+TGG | + | chr1_4:50818429-50818448 | Msa0168310:intron | 35.0% |
| TAAGTATGTTGTCTCAACCA+AGG | + | chr1_4:50818567-50818586 | Msa0168310:CDS | 35.0% | |
| AAGTATGTTGTCTCAACCAA+GGG | + | chr1_4:50818568-50818587 | Msa0168310:CDS | 35.0% | |
| AAAGTTGTGTCTTTGCTTCA+TGG | + | chr1_4:50818650-50818669 | Msa0168310:CDS | 35.0% | |
| GTTTGGATCATTCAAGAGTT+AGG | + | chr1_4:50818672-50818691 | Msa0168310:CDS | 35.0% | |
| AGAAAGCAGTTTGAGGATAA+GGG | - | chr1_4:50818721-50818740 | None:intergenic | 35.0% | |
| AAGAAAGCAGTTTGAGGATA+AGG | - | chr1_4:50818722-50818741 | None:intergenic | 35.0% | |
| TTGTCTAAGAAAGCAGTTTG+AGG | - | chr1_4:50818728-50818747 | None:intergenic | 35.0% | |
| !!! | AGTGAACATTTTTGGTGTGA+TGG | - | chr1_4:50818778-50818797 | None:intergenic | 35.0% |
| !! | CTGAACTGAATTTTGAGGAT+AGG | - | chr1_4:50818813-50818832 | None:intergenic | 35.0% |
| CTATCCTCAAAATTCAGTTC+AGG | + | chr1_4:50818811-50818830 | Msa0168310:CDS | 35.0% | |
| ! | AGTTCCTGAACTGAATTTTG+AGG | - | chr1_4:50818818-50818837 | None:intergenic | 35.0% |
| CAAAATTCAGTTCAGGAACT+TGG | + | chr1_4:50818818-50818837 | Msa0168310:CDS | 35.0% | |
| ! | CAAGAGAAAGTGGATTTCTT+AGG | - | chr1_4:50818850-50818869 | None:intergenic | 35.0% |
| CTAAGAAATCCACTTTCTCT+TGG | + | chr1_4:50818848-50818867 | Msa0168310:CDS | 35.0% | |
| !! | CTTTGGAATTGAGTTCAAAC+GGG | + | chr1_4:50818879-50818898 | Msa0168310:CDS | 35.0% |
| GAATTCTGATCTGAAGAGAT+CGG | - | chr1_4:50819217-50819236 | None:intergenic | 35.0% | |
| ATTACCTCTTCTTTGAGCAA+TGG | - | chr1_4:50819309-50819328 | None:intergenic | 35.0% | |
| TAACTTTGTGTGTTCTTGAC+AGG | + | chr1_4:50819403-50819422 | Msa0168310:intron | 35.0% | |
| ATCTCAAATAGCAAAACGGT+TGG | - | chr1_4:50819560-50819579 | None:intergenic | 35.0% | |
| AAAAAGGGCTATCGAACATA+TGG | - | chr1_4:50819873-50819892 | None:intergenic | 35.0% | |
| !! | CTTGATTTTGTTTCTTCAGG+GGG | + | chr1_4:50820050-50820069 | Msa0168310:intron | 35.0% |
| TAGGTAACCATTAGCATAGT+AGG | - | chr1_4:50820142-50820161 | None:intergenic | 35.0% | |
| ATGCTAATGGTTACCTATGA+AGG | + | chr1_4:50820145-50820164 | Msa0168310:CDS | 35.0% | |
| GTCTTCACAAATAGAATGAC+GGG | - | chr1_4:50820231-50820250 | None:intergenic | 35.0% | |
| GGTCTTCACAAATAGAATGA+CGG | - | chr1_4:50820232-50820251 | None:intergenic | 35.0% | |
| ! | AGTGCTGGAGTATGTAAAAT+TGG | + | chr1_4:50820384-50820403 | Msa0168310:three_prime_UTR | 35.0% |
| ! | TTCCATGGGTTTGAGATTGA+AGG | - | chr1_4:50818007-50818026 | None:intergenic | 40.0% |
| GCTGTTGTTGATGTTTCCAT+GGG | - | chr1_4:50818021-50818040 | None:intergenic | 40.0% | |
| TGCTGTTGTTGATGTTTCCA+TGG | - | chr1_4:50818022-50818041 | None:intergenic | 40.0% | |
| !! | GTGTGTGCTTCTTTTGATTC+AGG | + | chr1_4:50818422-50818441 | Msa0168310:intron | 40.0% |
| TAGAAAGAGGGAGGCTAAAA+TGG | + | chr1_4:50818493-50818512 | Msa0168310:exon | 40.0% | |
| CTATGATGAACTTGATCCCT+TGG | - | chr1_4:50818587-50818606 | None:intergenic | 40.0% | |
| CAAGGGATCAAGTTCATCAT+AGG | + | chr1_4:50818585-50818604 | Msa0168310:CDS | 40.0% | |
| AAACTGGTGAAGCTGTGAAT+AGG | + | chr1_4:50818621-50818640 | Msa0168310:CDS | 40.0% | |
| TGTGTCTTTGCTTCATGGTT+TGG | + | chr1_4:50818655-50818674 | Msa0168310:CDS | 40.0% | |
| TTCTCTTGGAAACCCTTCTT+TGG | + | chr1_4:50818862-50818881 | Msa0168310:CDS | 40.0% | |
| AAGCTGAAATGATGTTCCGA+AGG | + | chr1_4:50819047-50819066 | Msa0168310:CDS | 40.0% | |
| AAAATTAAGGCTTATGCCGC+TGG | - | chr1_4:50819077-50819096 | None:intergenic | 40.0% | |
| ATTTCCTCCTTGAGCATAGA+CGG | + | chr1_4:50819145-50819164 | Msa0168310:CDS | 40.0% | |
| GGAAGTTCCTTCCATTTGAT+TGG | + | chr1_4:50819187-50819206 | Msa0168310:CDS | 40.0% | |
| ATCAGAATTCACAGCACAAG+AGG | + | chr1_4:50819227-50819246 | Msa0168310:CDS | 40.0% | |
| AAGAGGAAATGTTCTGCTAG+AGG | + | chr1_4:50819244-50819263 | Msa0168310:CDS | 40.0% | |
| AATGCCATTGCTCAAAGAAG+AGG | + | chr1_4:50819302-50819321 | Msa0168310:CDS | 40.0% | |
| TCCATGAGTAATCATCAGGA+GGG | - | chr1_4:50819488-50819507 | None:intergenic | 40.0% | |
| TTCCTCCATGAGTAATCATC+AGG | - | chr1_4:50819492-50819511 | None:intergenic | 40.0% | |
| GATTACTCATGGAGGAAGTA+CGG | + | chr1_4:50819495-50819514 | Msa0168310:CDS | 40.0% | |
| ! | ATTACTCATGGAGGAAGTAC+GGG | + | chr1_4:50819496-50819515 | Msa0168310:CDS | 40.0% |
| AAAACGGTTGGACATACCTA+GGG | - | chr1_4:50819548-50819567 | None:intergenic | 40.0% | |
| ! | TGATTGATGTACTAGCCTGT+GGG | + | chr1_4:50819734-50819753 | Msa0168310:intron | 40.0% |
| TGTGAAGACCTCTATGTGAT+TGG | + | chr1_4:50820242-50820261 | Msa0168310:three_prime_UTR | 40.0% | |
| ATCTCAAGCCAATCACATAG+AGG | - | chr1_4:50820253-50820272 | None:intergenic | 40.0% | |
| ! | ATATTTCAAGTGATGCGAGC+AGG | + | chr1_4:50820283-50820302 | Msa0168310:three_prime_UTR | 40.0% |
| ! | GACTGCAGATTTTGCCTTTT+GGG | + | chr1_4:50820305-50820324 | Msa0168310:three_prime_UTR | 40.0% |
| !! | TTTTGGGTAGTAGCTTGGTT+GGG | + | chr1_4:50820321-50820340 | Msa0168310:three_prime_UTR | 40.0% |
| TTGGGGAGTCGTTTATTTAG+AGG | + | chr1_4:50820339-50820358 | Msa0168310:three_prime_UTR | 40.0% | |
| TGGGGAGTCGTTTATTTAGA+GGG | + | chr1_4:50820340-50820359 | Msa0168310:three_prime_UTR | 40.0% | |
| GAGAGATAGAGAGAGAGAGA+GGG | - | chr1_4:50817820-50817839 | None:intergenic | 45.0% | |
| AGAGAGATAGAGAGAGAGAG+AGG | - | chr1_4:50817821-50817840 | None:intergenic | 45.0% | |
| AAGGTGTGAAGAGAGGACTT+TGG | - | chr1_4:50817988-50818007 | None:intergenic | 45.0% | |
| ! | GAGATTGAAGGTGTGAAGAG+AGG | - | chr1_4:50817995-50818014 | None:intergenic | 45.0% |
| CACCTTCAATCTCAAACCCA+TGG | + | chr1_4:50818002-50818021 | Msa0168310:five_prime_UTR | 45.0% | |
| GAAGGGTTTCCAAGAGAAAG+TGG | - | chr1_4:50818860-50818879 | None:intergenic | 45.0% | |
| !! | TTGATGCAGCTTGTTGAGCA+AGG | - | chr1_4:50818919-50818938 | None:intergenic | 45.0% |
| CACCAACAATGTCGTCTACT+AGG | + | chr1_4:50819116-50819135 | Msa0168310:CDS | 45.0% | |
| GACCTAGTAGACGACATTGT+TGG | - | chr1_4:50819121-50819140 | None:intergenic | 45.0% | |
| AGATCGGAGCTCCAATCAAA+TGG | - | chr1_4:50819201-50819220 | None:intergenic | 45.0% | |
| ATGTTCTGCTAGAGGTGATG+AGG | + | chr1_4:50819252-50819271 | Msa0168310:CDS | 45.0% | |
| TGTTCTGCTAGAGGTGATGA+GGG | + | chr1_4:50819253-50819272 | Msa0168310:CDS | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | + | chr1_4:50819458-50819477 | Msa0168310:CDS | 45.0% | |
| TCCCTCCTGATGATTACTCA+TGG | + | chr1_4:50819484-50819503 | Msa0168310:CDS | 45.0% | |
| CTCCATGAGTAATCATCAGG+AGG | - | chr1_4:50819489-50819508 | None:intergenic | 45.0% | |
| CTCCTGATGATTACTCATGG+AGG | + | chr1_4:50819487-50819506 | Msa0168310:CDS | 45.0% | |
| CAAAACGGTTGGACATACCT+AGG | - | chr1_4:50819549-50819568 | None:intergenic | 45.0% | |
| ! | CTGATTGATGTACTAGCCTG+TGG | + | chr1_4:50819733-50819752 | Msa0168310:intron | 45.0% |
| ! | GATTGATGTACTAGCCTGTG+GGG | + | chr1_4:50819735-50819754 | Msa0168310:intron | 45.0% |
| TATAAGTGCAGCAGCATGAG+AGG | + | chr1_4:50820076-50820095 | Msa0168310:CDS | 45.0% | |
| TCTCAACATGCTTCCTAGCA+GGG | - | chr1_4:50820105-50820124 | None:intergenic | 45.0% | |
| GGATGAGCCTACTATGCTAA+TGG | + | chr1_4:50820132-50820151 | Msa0168310:CDS | 45.0% | |
| GTGATTATGCTCGCCTTCAT+AGG | - | chr1_4:50820161-50820180 | None:intergenic | 45.0% | |
| CATGCATTTGCAGGTTGTGT+TGG | - | chr1_4:50820193-50820212 | None:intergenic | 45.0% | |
| CATGCAGTTCATGCATTTGC+AGG | - | chr1_4:50820202-50820221 | None:intergenic | 45.0% | |
| CTGCAAATGCATGAACTGCA+TGG | + | chr1_4:50820200-50820219 | Msa0168310:exon | 45.0% | |
| ! | GGACTGCAGATTTTGCCTTT+TGG | + | chr1_4:50820304-50820323 | Msa0168310:three_prime_UTR | 45.0% |
| !! | TTGCCTTTTGGGTAGTAGCT+TGG | + | chr1_4:50820316-50820335 | Msa0168310:three_prime_UTR | 45.0% |
| CAACCAAGCTACTACCCAAA+AGG | - | chr1_4:50820322-50820341 | None:intergenic | 45.0% | |
| !! | CTTTTGGGTAGTAGCTTGGT+TGG | + | chr1_4:50820320-50820339 | Msa0168310:three_prime_UTR | 45.0% |
| TTTGGGTAGTAGCTTGGTTG+GGG | + | chr1_4:50820322-50820341 | Msa0168310:three_prime_UTR | 45.0% | |
| !! | GAAGATCACTGGTTTAGTGC+TGG | + | chr1_4:50820369-50820388 | Msa0168310:three_prime_UTR | 45.0% |
| !!! | ATTTTTATTTTTTTTATCTT+TGG | + | chr1_4:50818143-50818162 | Msa0168310:intron | 5.0% |
| AGATAGAGAGAGAGAGAGGG+AGG | - | chr1_4:50817817-50817836 | None:intergenic | 50.0% | |
| ! | GCTTGTTGAGCAAGGTGAAG+CGG | - | chr1_4:50818911-50818930 | None:intergenic | 50.0% |
| ! | TGGTGATGATGCTGTTGCTG+CGG | - | chr1_4:50818962-50818981 | None:intergenic | 50.0% |
| TTTGTTGCTGCAGCTGCTGT+TGG | - | chr1_4:50818982-50819001 | None:intergenic | 50.0% | |
| AACAGCAGCTGCAGCAACAA+AGG | + | chr1_4:50818981-50819000 | Msa0168310:CDS | 50.0% | |
| ATGTTCCGAAGGAACACCAG+CGG | + | chr1_4:50819058-50819077 | Msa0168310:CDS | 50.0% | |
| TTATGCCGCTGGTGTTCCTT+CGG | - | chr1_4:50819066-50819085 | None:intergenic | 50.0% | |
| CGGAGCTCCAATCAAATGGA+AGG | - | chr1_4:50819197-50819216 | None:intergenic | 50.0% | |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | - | chr1_4:50819459-50819478 | None:intergenic | 50.0% |
| TACGGGCAGAAGCCTATCAA+GGG | + | chr1_4:50819513-50819532 | Msa0168310:CDS | 50.0% | |
| CTCTCAACATGCTTCCTAGC+AGG | - | chr1_4:50820106-50820125 | None:intergenic | 50.0% | |
| ! | CTGCTAGGAAGCATGTTGAG+AGG | + | chr1_4:50820104-50820123 | Msa0168310:CDS | 50.0% |
| !! | GAAGCATGTTGAGAGGTGCT+TGG | + | chr1_4:50820111-50820130 | Msa0168310:CDS | 50.0% |
| ! | TGCAGGTTGTGTTGGTACCT+TGG | - | chr1_4:50820185-50820204 | None:intergenic | 50.0% |
| GAGGGAGTGATGAAGATCAC+TGG | + | chr1_4:50820358-50820377 | Msa0168310:three_prime_UTR | 50.0% | |
| GCTTCCGTCTATGCTCAAGG+AGG | - | chr1_4:50819152-50819171 | None:intergenic | 55.0% | |
| CACGCTTCCGTCTATGCTCA+AGG | - | chr1_4:50819155-50819174 | None:intergenic | 55.0% | |
| CTTGAGCATAGACGGAAGCG+TGG | + | chr1_4:50819153-50819172 | Msa0168310:CDS | 55.0% | |
| GTACGGGCAGAAGCCTATCA+AGG | + | chr1_4:50819512-50819531 | Msa0168310:CDS | 55.0% | |
| GGTTGGACATACCTAGGGTG+AGG | - | chr1_4:50819543-50819562 | None:intergenic | 55.0% | |
| AGGCGAGCATAATCACGCCA+AGG | + | chr1_4:50820165-50820184 | Msa0168310:CDS | 55.0% | |
| ! | AGACGGAAGCGTGGCTAACG+TGG | + | chr1_4:50819162-50819181 | Msa0168310:CDS | 60.0% |
| ! | GGAAGCGTGGCTAACGTGGA+TGG | + | chr1_4:50819166-50819185 | Msa0168310:CDS | 60.0% |
| GGGTGAGGAGAGCCCTTGAT+AGG | - | chr1_4:50819528-50819547 | None:intergenic | 60.0% | |
| TCAAGGGCTCTCCTCACCCT+AGG | + | chr1_4:50819529-50819548 | Msa0168310:CDS | 60.0% | |
| GCATGAGAGGCTGCCCTGCT+AGG | + | chr1_4:50820089-50820108 | Msa0168310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 50817796 | 50820500 | 50817796 | ID=Msa0168310;Name=Msa0168310 |
| chr1_4 | mRNA | 50817796 | 50820500 | 50817796 | ID=Msa0168310-mRNA-1;Parent=Msa0168310;Name=Msa0168310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=304|1|1|1|0.66|0.75|4|287|360 |
| chr1_4 | exon | 50817796 | 50818079 | 50817796 | ID=Msa0168310-mRNA-1:exon:14942;Parent=Msa0168310-mRNA-1 |
| chr1_4 | exon | 50818492 | 50819323 | 50818492 | ID=Msa0168310-mRNA-1:exon:14943;Parent=Msa0168310-mRNA-1 |
| chr1_4 | exon | 50819425 | 50819550 | 50819425 | ID=Msa0168310-mRNA-1:exon:14944;Parent=Msa0168310-mRNA-1 |
| chr1_4 | exon | 50820069 | 50820500 | 50820069 | ID=Msa0168310-mRNA-1:exon:14945;Parent=Msa0168310-mRNA-1 |
| chr1_4 | five_prime_UTR | 50817796 | 50818079 | 50817796 | ID=Msa0168310-mRNA-1:five_prime_utr;Parent=Msa0168310-mRNA-1 |
| chr1_4 | five_prime_UTR | 50818492 | 50818511 | 50818492 | ID=Msa0168310-mRNA-1:five_prime_utr;Parent=Msa0168310-mRNA-1 |
| chr1_4 | CDS | 50818512 | 50819323 | 50818512 | ID=Msa0168310-mRNA-1:cds;Parent=Msa0168310-mRNA-1 |
| chr1_4 | CDS | 50819425 | 50819550 | 50819425 | ID=Msa0168310-mRNA-1:cds;Parent=Msa0168310-mRNA-1 |
| chr1_4 | CDS | 50820069 | 50820213 | 50820069 | ID=Msa0168310-mRNA-1:cds;Parent=Msa0168310-mRNA-1 |
| chr1_4 | three_prime_UTR | 50820214 | 50820500 | 50820214 | ID=Msa0168310-mRNA-1:three_prime_utr;Parent=Msa0168310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
