AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0311500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311500 MtrunA17_Chr1g0211121 83.598 189 26 1 176 359 1 189 6.35e-106 308
Msa0311500 MtrunA17_Chr8g0350481 83.598 189 26 1 176 359 1 189 6.35e-106 308
Msa0311500 MtrunA17_Chr7g0255731 82.540 189 28 1 176 359 1 189 1.18e-104 305
Msa0311500 MtrunA17_Chr2g0280691 95.270 148 4 1 1 148 696 840 1.42e-89 286
Msa0311500 MtrunA17_Chr4g0048631 68.874 151 44 2 1 148 702 852 4.06e-64 218
Msa0311500 MtrunA17_Chr2g0280711 67.974 153 44 3 1 148 700 852 1.11e-61 211
Msa0311500 MtrunA17_Chr8g0354391 51.656 151 70 2 1 148 104 254 8.40e-48 162
Msa0311500 MtrunA17_Chr8g0354431 54.667 150 66 2 1 148 512 661 4.63e-46 166
Msa0311500 MtrunA17_Chr8g0361341 55.034 149 59 3 1 148 8 149 6.86e-46 154
Msa0311500 MtrunA17_Chr3g0092301 51.678 149 70 2 1 148 100 247 3.21e-45 155
Msa0311500 MtrunA17_Chr2g0280761 52.000 150 68 3 1 148 1 148 1.66e-44 150
Msa0311500 MtrunA17_Chr4g0042431 46.667 150 78 2 1 148 1 150 1.75e-44 150
Msa0311500 MtrunA17_Chr2g0280831 51.701 147 70 1 1 147 265 410 2.69e-44 157
Msa0311500 MtrunA17_Chr8g0354421 52.667 150 69 2 1 148 533 682 3.38e-44 161
Msa0311500 MtrunA17_Chr8g0354441 52.667 150 69 2 1 148 520 669 4.70e-44 161
Msa0311500 MtrunA17_Chr8g0354331 51.724 145 68 2 1 143 270 414 5.03e-44 157
Msa0311500 MtrunA17_Chr3g0081001 53.741 147 66 2 1 145 513 659 5.68e-44 160
Msa0311500 MtrunA17_Chr2g0280681 49.714 175 83 4 1 170 671 845 1.01e-43 161
Msa0311500 MtrunA17_Chr3g0084661 56.000 150 57 5 1 148 203 345 1.79e-43 153
Msa0311500 MtrunA17_Chr2g0280791 52.027 148 70 1 1 148 691 837 3.44e-43 159
Msa0311500 MtrunA17_Chr8g0354281 51.007 149 72 1 1 148 505 653 4.22e-43 158
Msa0311500 MtrunA17_Chr8g0354351 53.333 150 68 2 1 148 503 652 4.40e-43 158
Msa0311500 MtrunA17_Chr2g0280801 52.027 148 70 1 1 148 697 843 5.20e-43 159
Msa0311500 MtrunA17_Chr3g0078531 53.691 149 65 3 1 148 697 842 7.55e-43 159
Msa0311500 MtrunA17_Chr6g0453561 51.656 151 70 3 1 148 37 187 1.08e-42 147
Msa0311500 MtrunA17_Chr4g0023221 52.667 150 67 3 1 148 900 1047 1.47e-42 158
Msa0311500 MtrunA17_Chr3g0098781 54.362 149 66 2 1 148 81 228 1.62e-42 147
Msa0311500 MtrunA17_Chr3g0078541 55.629 151 59 4 1 148 700 845 1.79e-42 157
Msa0311500 MtrunA17_Chr3g0081011 51.724 145 68 2 1 143 509 653 3.03e-42 155
Msa0311500 MtrunA17_Chr2g0318811 52.980 151 63 4 1 148 670 815 4.10e-42 156
Msa0311500 MtrunA17_Chr3g0078551 53.333 150 67 3 1 148 694 842 4.15e-42 156
Msa0311500 MtrunA17_Chr4g0042361 53.020 149 68 2 1 148 709 856 4.80e-42 156
Msa0311500 MtrunA17_Chr3g0093161 52.000 150 69 3 1 148 667 815 5.07e-42 156
Msa0311500 MtrunA17_Chr8g0361161 52.349 149 70 1 1 148 214 362 3.16e-41 148
Msa0311500 MtrunA17_Chr3g0082941 49.315 146 65 2 1 145 343 480 4.93e-41 150
Msa0311500 MtrunA17_Chr8g0361441 50.000 150 72 3 1 148 676 824 1.06e-40 152
Msa0311500 MtrunA17_Chr4g0023111 52.857 140 65 1 1 139 884 1023 1.49e-40 152
Msa0311500 MtrunA17_Chr3g0078521 53.691 149 65 3 1 148 689 834 1.51e-40 152
Msa0311500 MtrunA17_Chr8g0361251 54.362 149 60 3 1 148 676 817 1.70e-40 152
Msa0311500 MtrunA17_Chr4g0042401 47.020 151 77 2 1 148 673 823 3.43e-40 151
Msa0311500 MtrunA17_Chr4g0055011 51.333 150 71 2 1 148 241 390 3.64e-40 145
Msa0311500 MtrunA17_Chr4g0048581 51.748 143 69 0 1 143 701 843 7.34e-40 150
Msa0311500 MtrunA17_Chr4g0042441 47.682 151 76 3 1 148 670 820 7.63e-40 150
Msa0311500 MtrunA17_Chr3g0084631 51.678 149 65 3 1 148 33 175 8.39e-40 139
Msa0311500 MtrunA17_Chr4g0048801 51.333 150 70 3 1 148 688 836 9.54e-40 149
Msa0311500 MtrunA17_Chr7g0236531 48.667 150 75 2 1 148 208 357 1.46e-39 143
Msa0311500 MtrunA17_Chr1g0206351 57.377 122 47 2 1 119 523 642 2.41e-39 147
Msa0311500 MtrunA17_Chr3g0081071 51.020 147 68 3 1 143 99 245 2.74e-39 140
Msa0311500 MtrunA17_Chr8g0361141 51.007 149 72 1 1 148 686 834 4.23e-39 147
Msa0311500 MtrunA17_Chr4g0042341 53.289 152 60 4 1 148 693 837 4.37e-39 147
Msa0311500 MtrunA17_Chr7g0236201 50.667 150 72 1 1 148 640 789 4.57e-39 147
Msa0311500 MtrunA17_Chr4g0042351 53.906 128 58 1 1 127 623 750 5.19e-39 147
Msa0311500 MtrunA17_Chr8g0361281 50.667 150 66 4 1 148 683 826 5.71e-39 147
Msa0311500 MtrunA17_Chr3g0084431 56.000 150 61 5 1 148 664 810 6.27e-39 147
Msa0311500 MtrunA17_Chr8g0357781 46.667 135 71 1 1 134 1 135 1.33e-38 135
Msa0311500 MtrunA17_Chr2g0318841 50.667 150 68 4 1 148 671 816 1.77e-38 146
Msa0311500 MtrunA17_Chr7g0236341 48.649 148 73 1 1 148 688 832 3.25e-38 145
Msa0311500 MtrunA17_Chr8g0354271 53.378 148 66 3 1 145 505 652 5.78e-38 144
Msa0311500 MtrunA17_Chr8g0357691 55.932 118 51 1 1 117 648 765 8.07e-38 144
Msa0311500 MtrunA17_Chr3g0084491 54.667 150 64 4 1 148 676 823 1.05e-37 144
Msa0311500 MtrunA17_Chr2g0318831 49.007 151 69 4 1 148 672 817 1.29e-37 143
Msa0311500 MtrunA17_Chr3g0084441 54.000 150 65 4 1 148 676 823 1.34e-37 143
Msa0311500 MtrunA17_Chr3g0084411 51.634 153 68 3 1 148 669 820 1.45e-37 143
Msa0311500 MtrunA17_Chr8g0361261 51.678 149 64 3 1 148 707 848 1.57e-37 143
Msa0311500 MtrunA17_Chr3g0081101 48.951 143 69 2 5 143 12 154 1.59e-37 132
Msa0311500 MtrunA17_Chr5g0394011 55.645 124 52 2 1 121 521 644 1.80e-37 142
Msa0311500 MtrunA17_Chr5g0428101 51.678 149 64 3 1 148 671 812 1.91e-37 143
Msa0311500 MtrunA17_Chr3g0084681 52.000 150 64 4 1 148 634 777 2.27e-37 142
Msa0311500 MtrunA17_Chr8g0358061 48.148 135 69 1 1 134 226 360 2.48e-37 138
Msa0311500 MtrunA17_Chr1g0206361 48.408 157 72 4 1 148 513 669 2.51e-37 142
Msa0311500 MtrunA17_Chr8g0340051 48.344 151 75 2 1 148 199 349 2.74e-37 137
Msa0311500 MtrunA17_Chr8g0360201 48.993 149 75 1 1 148 576 724 2.89e-37 142
Msa0311500 MtrunA17_Chr5g0428111 51.678 149 70 2 1 148 673 820 3.06e-37 142
Msa0311500 MtrunA17_Chr2g0280701 49.664 149 72 2 1 148 670 816 3.94e-37 142
Msa0311500 MtrunA17_Chr8g0357921 45.926 135 72 1 1 134 1 135 3.97e-37 130
Msa0311500 MtrunA17_Chr8g0361301 51.678 149 64 3 1 148 676 817 4.33e-37 142
Msa0311500 MtrunA17_Chr7g0236471 48.000 150 76 2 1 148 510 659 4.43e-37 141
Msa0311500 MtrunA17_Chr8g0357961 48.276 145 73 2 1 143 654 798 4.57e-37 142
Msa0311500 MtrunA17_Chr4g0042381 56.780 118 50 1 1 117 623 740 5.11e-37 141
Msa0311500 MtrunA17_Chr3g0084421 52.258 155 64 4 1 148 632 783 5.81e-37 141
Msa0311500 MtrunA17_Chr8g0340071 48.000 150 76 2 1 148 673 822 6.76e-37 141
Msa0311500 MtrunA17_Chr7g0236121 52.593 135 64 0 1 135 674 808 6.89e-37 141
Msa0311500 MtrunA17_Chr7g0236641 48.667 150 75 2 1 148 695 844 6.95e-37 141
Msa0311500 MtrunA17_Chr7g0236551 48.667 150 75 2 1 148 658 807 7.21e-37 141
Msa0311500 MtrunA17_Chr2g0280751 47.297 148 77 1 1 148 696 842 7.93e-37 141
Msa0311500 MtrunA17_Chr8g0357991 47.586 145 74 2 1 143 655 799 8.10e-37 141
Msa0311500 MtrunA17_Chr2g0323231 50.847 118 57 1 1 117 348 465 1.83e-36 137
Msa0311500 MtrunA17_Chr8g0358121 50.382 131 64 1 1 130 632 762 2.14e-36 140
Msa0311500 MtrunA17_Chr8g0357661 49.587 121 60 1 1 120 33 153 2.35e-36 130
Msa0311500 MtrunA17_Chr8g0340091 49.007 151 74 2 1 148 702 852 2.65e-36 139
Msa0311500 MtrunA17_Chr1g0154331 54.237 118 52 2 1 117 209 325 3.14e-36 134
Msa0311500 MtrunA17_Chr4g0042391 49.333 150 74 2 1 148 623 772 3.26e-36 139
Msa0311500 MtrunA17_Chr8g0357631 55.085 118 52 1 1 117 638 755 3.46e-36 139
Msa0311500 MtrunA17_Chr4g0048781 44.966 149 80 2 1 148 158 305 6.02e-36 132
Msa0311500 MtrunA17_Chr3g0084691 52.667 150 64 4 1 148 692 836 7.06e-36 138
Msa0311500 MtrunA17_Chr3g0084451 52.000 150 68 4 1 148 676 823 7.80e-36 138
Msa0311500 MtrunA17_Chr4g0048661 48.322 149 75 2 1 148 207 354 9.61e-36 133
Msa0311500 MtrunA17_Chr1g0206551 54.918 122 52 2 1 120 205 325 1.17e-35 133
Msa0311500 MtrunA17_Chr8g0340081 47.333 150 77 2 1 148 677 826 1.41e-35 137
Msa0311500 MtrunA17_Chr8g0357981 46.207 145 76 2 1 143 475 619 1.82e-35 136
Msa0311500 MtrunA17_Chr8g0358081 45.139 144 78 1 1 143 631 774 2.10e-35 137
Msa0311500 MtrunA17_Chr2g0280781 47.651 149 71 2 1 148 680 822 2.30e-35 137
Msa0311500 MtrunA17_Chr8g0357651 48.148 135 69 1 1 134 640 774 2.92e-35 136
Msa0311500 MtrunA17_Chr5g0426941 45.098 153 73 3 1 143 509 660 3.47e-35 135
Msa0311500 MtrunA17_Chr8g0357831 58.491 106 43 1 1 105 362 467 4.13e-35 134
Msa0311500 MtrunA17_Chr4g0020081 45.638 149 79 2 1 148 681 828 4.25e-35 136
Msa0311500 MtrunA17_Chr8g0358071 45.139 144 78 1 1 143 646 789 4.38e-35 136
Msa0311500 MtrunA17_Chr1g0206321 50.413 121 58 1 1 119 1 121 5.43e-35 125
Msa0311500 MtrunA17_Chr8g0357881 47.407 135 70 1 1 134 646 780 6.06e-35 135
Msa0311500 MtrunA17_Chr8g0358101 45.139 144 78 1 1 143 634 777 6.06e-35 135
Msa0311500 MtrunA17_Chr8g0357761 52.893 121 56 1 1 120 650 770 8.05e-35 135
Msa0311500 MtrunA17_Chr8g0358031 47.761 134 69 1 1 133 649 782 8.72e-35 135
Msa0311500 MtrunA17_Chr7g0236651 46.980 149 71 2 1 148 655 796 1.62e-34 134
Msa0311500 MtrunA17_Chr5g0422921 52.667 150 68 3 1 148 668 816 1.72e-34 134
Msa0311500 MtrunA17_Chr7g0236691 46.667 150 78 2 1 148 670 819 1.99e-34 134
Msa0311500 MtrunA17_Chr8g0358141 44.521 146 76 2 1 143 248 391 2.02e-34 130
Msa0311500 MtrunA17_Chr4g0048791 48.322 149 73 3 1 148 702 847 2.66e-34 134
Msa0311500 MtrunA17_Chr5g0428581 53.333 120 54 2 1 119 214 332 3.91e-34 129
Msa0311500 MtrunA17_Chr6g0474511 77.551 98 17 1 262 359 1 93 4.61e-34 121
Msa0311500 MtrunA17_Chr7g0236231 44.667 150 81 2 1 148 688 837 4.84e-34 133
Msa0311500 MtrunA17_Chr1g0205771 50.370 135 63 2 1 134 513 644 5.45e-34 132
Msa0311500 MtrunA17_Chr1g0154311 53.390 118 53 2 1 117 521 637 5.76e-34 132
Msa0311500 MtrunA17_Chr8g0357711 52.542 118 55 1 1 117 647 764 5.96e-34 132
Msa0311500 MtrunA17_Chr4g0048741 47.651 149 76 2 1 148 702 849 7.13e-34 132
Msa0311500 MtrunA17_Chr4g0048641 45.638 149 79 2 1 148 628 775 7.82e-34 132
Msa0311500 MtrunA17_Chr8g0340111 53.659 123 56 1 1 122 675 797 9.36e-34 132
Msa0311500 MtrunA17_Chr1g0154371 46.667 150 71 4 1 143 526 673 1.02e-33 132
Msa0311500 MtrunA17_Chr8g0361431 54.167 120 53 2 1 119 654 772 1.09e-33 132
Msa0311500 MtrunA17_Chr2g0280731 45.333 150 77 2 1 148 720 866 1.49e-33 131
Msa0311500 MtrunA17_Chr3g0081031 50.345 145 70 2 1 143 522 666 1.51e-33 131
Msa0311500 MtrunA17_Chr3g0119041 48.120 133 67 2 1 132 510 641 2.74e-33 130
Msa0311500 MtrunA17_Chr1g0206561 52.459 122 55 3 1 120 499 619 5.02e-33 129
Msa0311500 MtrunA17_Chr8g0344011 78.261 69 15 0 176 244 1 69 5.45e-33 119
Msa0311500 MtrunA17_Chr7g0236561 46.667 150 77 3 1 148 675 823 7.07e-33 129
Msa0311500 MtrunA17_Chr4g0048681 45.638 149 79 2 1 148 450 597 8.32e-33 129
Msa0311500 MtrunA17_Chr1g0154321 53.982 113 50 2 1 112 538 649 8.50e-33 129
Msa0311500 MtrunA17_Chr7g0236571 46.207 145 76 2 6 148 510 654 1.60e-32 128
Msa0311500 MtrunA17_Chr1g0154351 48.148 135 68 2 1 134 528 661 2.92e-32 127
Msa0311500 MtrunA17_Chr1g0206521 45.223 157 81 3 1 156 505 657 4.61e-32 127
Msa0311500 MtrunA17_Chr1g0206521 52.066 121 56 2 1 120 1147 1266 5.79e-30 121
Msa0311500 MtrunA17_Chr8g0357871 56.250 96 38 2 1 95 1 93 6.29e-32 116
Msa0311500 MtrunA17_Chr1g0206391 47.500 120 62 1 1 119 210 329 1.13e-31 122
Msa0311500 MtrunA17_Chr5g0393981 41.722 151 79 2 1 142 566 716 2.11e-31 125
Msa0311500 MtrunA17_Chr8g0347571 43.796 137 73 2 1 136 740 873 2.38e-31 125
Msa0311500 MtrunA17_Chr1g0206461 52.066 121 56 2 1 120 503 622 3.56e-31 124
Msa0311500 MtrunA17_Chr6g0484231 43.373 166 89 5 1 164 218 380 5.14e-31 121
Msa0311500 MtrunA17_Chr4g0048711 42.384 151 85 2 1 150 99 248 7.75e-31 120
Msa0311500 MtrunA17_Chr4g0048711 50.459 109 53 1 1 108 256 364 4.93e-27 109
Msa0311500 MtrunA17_Chr1g0206331 45.455 143 73 2 1 138 505 647 7.95e-31 123
Msa0311500 MtrunA17_Chr1g0206231 45.070 142 76 2 1 141 516 656 8.71e-31 123
Msa0311500 MtrunA17_Chr1g0206221 44.853 136 73 2 7 141 1 135 1.86e-30 113
Msa0311500 MtrunA17_Chr1g0206401 47.500 120 62 1 1 119 520 639 1.87e-30 122
Msa0311500 MtrunA17_Chr5g0394021 45.578 147 76 3 1 145 491 635 2.22e-30 122
Msa0311500 MtrunA17_Chr6g0475131 44.776 134 71 2 1 131 179 312 4.99e-30 117
Msa0311500 MtrunA17_Chr4g0048731 50.000 118 57 2 1 117 216 332 6.33e-30 117
Msa0311500 MtrunA17_Chr6g0474991 46.032 126 61 3 1 121 33 156 1.77e-28 109
Msa0311500 MtrunA17_Chr6g0474901 46.825 126 60 3 1 121 736 859 2.93e-28 116
Msa0311500 MtrunA17_Chr5g0394001 51.220 123 59 1 1 122 500 622 4.03e-28 115
Msa0311500 MtrunA17_Chr6g0474811 46.825 126 60 3 1 121 743 866 1.09e-27 114
Msa0311500 MtrunA17_Chr1g0206261 42.466 146 80 3 1 144 258 401 1.11e-27 112
Msa0311500 MtrunA17_Chr1g0206431 51.240 121 57 2 1 120 55 174 1.18e-27 107
Msa0311500 MtrunA17_Chr4g0065521 40.972 144 82 3 3 143 209 352 1.62e-27 111
Msa0311500 MtrunA17_Chr6g0474871 46.825 126 60 3 1 121 735 858 1.84e-27 114
Msa0311500 MtrunA17_Chr6g0474861 46.825 126 60 3 1 121 456 579 2.41e-27 113
Msa0311500 MtrunA17_Chr6g0475091 46.032 126 61 3 1 121 751 874 3.07e-27 113
Msa0311500 MtrunA17_Chr1g0206531 51.240 121 57 2 1 120 507 626 4.93e-27 112
Msa0311500 MtrunA17_Chr6g0475111 39.744 156 78 3 1 143 757 909 7.68e-27 112
Msa0311500 MtrunA17_Chr6g0475201 41.985 131 73 2 1 128 744 874 8.73e-27 112
Msa0311500 MtrunA17_Chr4g0065561 39.583 144 84 2 3 143 618 761 1.68e-26 110
Msa0311500 MtrunA17_Chr7g0236511 43.511 131 72 2 20 148 669 799 8.18e-26 108
Msa0311500 MtrunA17_Chr1g0206451 53.175 126 50 4 1 121 542 663 1.49e-25 108
Msa0311500 MtrunA17_Chr6g0474851 43.651 126 64 3 1 121 98 221 2.06e-25 103
Msa0311500 MtrunA17_Chr8g0354291 44.660 103 56 1 47 148 2 104 3.59e-25 98.2
Msa0311500 MtrunA17_Chr6g0475181 38.760 129 64 2 1 128 1 115 3.97e-25 99.0
Msa0311500 MtrunA17_Chr7g0236161 42.963 135 58 1 1 135 640 755 6.12e-25 106
Msa0311500 MtrunA17_Chr4g0065541 37.576 165 85 4 3 166 610 757 5.94e-24 103
Msa0311500 MtrunA17_Chr8g0376131 39.167 120 70 2 1 117 221 340 6.94e-23 99.0
Msa0311500 MtrunA17_Chr1g0206421 47.826 115 58 1 1 115 398 510 1.40e-22 99.0
Msa0311500 MtrunA17_Chr2g0281241 50.505 99 38 2 1 99 224 311 1.52e-22 96.7
Msa0311500 MtrunA17_Chr7g0226891 41.026 117 68 1 1 117 218 333 6.52e-22 95.9
Msa0311500 MtrunA17_Chr7g0259811 35.220 159 70 5 206 355 44 178 7.30e-21 89.0
Msa0311500 MtrunA17_Chr2g0277961 39.286 140 58 5 202 339 12 126 2.66e-20 85.5
Msa0311500 MtrunA17_Chr1g0160921 40.833 120 68 3 1 117 220 339 2.99e-20 91.3
Msa0311500 MtrunA17_Chr8g0358161 39.259 135 50 3 1 134 216 319 1.17e-19 88.6
Msa0311500 MtrunA17_Chr4g0071371 35.878 131 82 2 2 130 305 435 2.55e-19 89.0
Msa0311500 MtrunA17_Chr2g0315151 42.056 107 61 1 1 106 835 941 4.05e-19 89.0
Msa0311500 MtrunA17_Chr3g0109411 40.164 122 66 4 2 118 494 613 5.28e-19 88.6
Msa0311500 MtrunA17_Chr2g0303891 32.787 183 83 7 181 358 30 177 1.24e-18 82.4
Msa0311500 MtrunA17_Chr8g0335801 32.353 170 84 5 187 355 32 171 2.08e-18 82.0
Msa0311500 MtrunA17_Chr8g0359691 41.121 107 62 1 1 106 833 939 2.26e-18 86.7
Msa0311500 MtrunA17_Chr6g0462761 33.333 162 75 5 196 348 28 165 2.90e-18 81.6
Msa0311500 MtrunA17_Chr2g0281971 44.545 110 51 3 1 105 218 322 3.56e-18 84.7
Msa0311500 MtrunA17_Chr2g0299041 34.351 131 84 2 2 130 283 413 9.02e-18 84.0
Msa0311500 MtrunA17_Chr2g0314861 30.653 199 96 5 1 183 89 261 1.17e-17 82.0
Msa0311500 MtrunA17_Chr5g0443531 39.831 118 70 1 1 117 847 964 1.94e-17 84.0
Msa0311500 MtrunA17_Chr2g0315081 41.121 107 62 1 1 106 823 929 2.64e-17 83.6
Msa0311500 MtrunA17_Chr2g0312561 36.792 106 66 1 1 105 212 317 3.03e-17 82.0
Msa0311500 MtrunA17_Chr8g0359641 41.667 108 62 1 1 107 836 943 6.19e-17 82.4
Msa0311500 MtrunA17_Chr7g0242201 39.252 107 63 2 1 106 213 318 6.20e-17 81.3
Msa0311500 MtrunA17_Chr3g0134701 33.113 151 73 4 206 355 48 171 6.75e-17 77.8
Msa0311500 MtrunA17_Chr1g0181341 37.190 121 73 2 1 118 217 337 8.31e-17 80.9
Msa0311500 MtrunA17_Chr5g0428551 39.726 73 44 0 47 119 43 115 1.10e-16 76.6
Msa0311500 MtrunA17_Chr2g0314961 41.121 107 62 1 1 106 305 411 1.13e-16 80.9
Msa0311500 MtrunA17_Chr3g0109461 39.024 123 67 4 2 118 509 629 1.28e-16 81.3
Msa0311500 MtrunA17_Chr3g0109431 40.164 122 66 4 2 118 497 616 1.48e-16 80.9
Msa0311500 MtrunA17_Chr4g0048571 43.956 91 49 2 1 89 106 196 2.53e-16 76.6
Msa0311500 MtrunA17_Chr8g0359651 39.815 108 64 1 1 107 836 943 2.71e-16 80.5
Msa0311500 MtrunA17_Chr2g0314901 40.187 107 63 1 1 106 838 944 2.90e-16 80.5
Msa0311500 MtrunA17_Chr2g0314911 40.187 107 63 1 1 106 831 937 4.55e-16 79.7
Msa0311500 MtrunA17_Chr5g0438071 39.806 103 61 1 1 102 829 931 4.62e-16 79.7
Msa0311500 MtrunA17_Chr2g0314821 40.187 107 63 1 1 106 833 939 5.28e-16 79.7
Msa0311500 MtrunA17_Chr2g0314991 40.187 107 63 1 1 106 380 486 6.79e-16 79.3
Msa0311500 MtrunA17_Chr2g0314991 38.318 107 65 1 1 106 1346 1452 1.00e-15 79.0
Msa0311500 MtrunA17_Chr2g0314841 40.187 107 63 1 1 106 830 936 7.38e-16 79.3
Msa0311500 MtrunA17_Chr2g0314881 39.252 107 64 1 1 106 398 504 8.07e-16 78.6
Msa0311500 MtrunA17_Chr8g0359581 38.889 108 58 2 1 108 83 182 8.46e-16 74.7
Msa0311500 MtrunA17_Chr5g0413171 35.714 126 71 4 1 118 256 379 1.24e-15 77.8
Msa0311500 MtrunA17_Chr2g0315061 40.187 107 63 1 1 106 206 312 1.24e-15 77.4
Msa0311500 MtrunA17_Chr8g0382101 36.111 108 66 1 1 105 453 560 1.67e-15 77.8
Msa0311500 MtrunA17_Chr2g0312571 34.906 106 68 1 1 105 217 322 1.68e-15 77.4
Msa0311500 MtrunA17_Chr3g0123891 36.937 111 67 1 1 108 456 566 1.84e-15 77.8
Msa0311500 MtrunA17_Chr6g0474831 46.341 82 38 2 1 78 226 305 2.15e-15 75.9
Msa0311500 MtrunA17_Chr8g0358821 36.134 119 74 2 1 118 856 973 2.24e-15 77.8
Msa0311500 MtrunA17_Chr1g0175421 31.081 148 93 4 1 144 305 447 5.13e-15 75.9
Msa0311500 MtrunA17_Chr8g0358521 33.929 168 78 7 192 358 42 177 1.27e-14 71.2
Msa0311500 MtrunA17_Chr3g0102451 34.513 113 74 0 1 113 495 607 1.42e-14 75.1
Msa0311500 MtrunA17_Chr8g0358911 34.906 106 68 1 1 105 215 320 1.43e-14 74.3
Msa0311500 MtrunA17_Chr5g0428511 43.836 73 39 2 48 119 2 73 1.46e-14 69.3
Msa0311500 MtrunA17_Chr5g0446651 34.513 113 74 0 1 113 528 640 2.98e-14 73.9
Msa0311500 MtrunA17_Chr2g0315011 37.500 104 62 2 1 102 9 111 4.40e-14 70.1
Msa0311500 MtrunA17_Chr8g0358781 40.777 103 59 2 1 102 511 612 5.59e-14 73.2
Msa0311500 MtrunA17_Chr8g0360591 37.736 106 65 1 1 105 213 318 6.82e-14 72.4
Msa0311500 MtrunA17_Chr1g0159611 33.043 115 77 0 1 115 411 525 1.20e-13 72.0
Msa0311500 MtrunA17_Chr8g0379931 38.889 108 65 1 1 107 876 983 1.65e-13 72.0
Msa0311500 MtrunA17_Chr8g0357931 54.839 62 27 1 9 69 565 626 1.71e-13 71.6
Msa0311500 MtrunA17_Chr8g0351221 34.375 128 74 3 1 123 550 672 2.43e-13 71.2
Msa0311500 MtrunA17_Chr1g0196391 33.333 126 77 4 1 121 468 591 3.13e-13 70.9
Msa0311500 MtrunA17_Chr7g0239371 27.607 163 117 1 1 162 507 669 3.35e-13 70.9
Msa0311500 MtrunA17_Chr4g0047561 39.844 128 72 4 1 126 216 340 3.36e-13 70.1
Msa0311500 MtrunA17_Chr3g0078761 34.513 113 74 0 1 113 515 627 3.63e-13 70.9
Msa0311500 MtrunA17_Chr7g0230071 36.316 190 61 7 175 359 71 205 5.33e-13 67.4
Msa0311500 MtrunA17_Chr2g0299301 36.538 104 64 2 1 102 1230 1333 5.46e-13 70.5
Msa0311500 MtrunA17_Chr1g0200911 38.182 110 61 2 1 105 474 581 6.36e-13 70.1
Msa0311500 MtrunA17_Chr2g0278851 36.449 107 66 1 1 105 441 547 9.50e-13 69.3
Msa0311500 MtrunA17_Chr2g0318171 34.848 132 78 4 1 130 649 774 9.98e-13 69.3
Msa0311500 MtrunA17_Chr3g0112111 35.345 116 67 3 1 113 517 627 1.25e-12 68.9
Msa0311500 MtrunA17_Chr6g0474961 39.474 76 45 1 47 121 133 208 1.40e-12 67.0
Msa0311500 MtrunA17_Chr1g0202331 31.405 121 81 2 1 119 702 822 1.85e-12 68.6
Msa0311500 MtrunA17_Chr7g0222221 33.673 98 65 0 14 111 206 303 1.94e-12 67.4
Msa0311500 MtrunA17_Chr4g0024841 31.544 149 71 5 199 346 44 162 2.54e-12 64.3
Msa0311500 MtrunA17_Chr7g0259211 30.827 133 89 2 1 130 457 589 2.66e-12 68.2
Msa0311500 MtrunA17_Chr5g0422411 47.761 67 28 2 176 242 1 60 3.32e-12 61.2
Msa0311500 MtrunA17_Chr7g0222261 33.673 98 65 0 14 111 315 412 3.44e-12 67.4
Msa0311500 MtrunA17_Chr2g0278831 36.364 110 63 2 1 105 463 570 3.46e-12 67.8
Msa0311500 MtrunA17_Chr8g0376141 29.333 150 73 4 207 355 4 121 3.49e-12 63.2
Msa0311500 MtrunA17_Chr3g0130891 48.684 76 29 4 172 246 69 135 3.56e-12 63.2
Msa0311500 MtrunA17_Chr4g0058891 30.702 114 78 1 1 114 455 567 4.08e-12 67.4
Msa0311500 MtrunA17_Chr8g0380681 33.083 133 85 3 1 129 1159 1291 5.20e-12 67.4
Msa0311500 MtrunA17_Chr3g0137741 32.787 122 80 2 1 121 660 780 6.03e-12 67.0
Msa0311500 MtrunA17_Chr2g0330471 33.333 117 76 2 1 116 575 690 6.28e-12 67.0
Msa0311500 MtrunA17_Chr1g0202201 31.897 116 71 3 1 115 514 622 7.03e-12 66.6
Msa0311500 MtrunA17_Chr8g0358901 32.773 119 71 2 1 118 237 347 7.41e-12 65.9
Msa0311500 MtrunA17_Chr7g0251031 35.135 148 90 4 1 143 97 243 8.18e-12 64.7
Msa0311500 MtrunA17_Chr5g0412141 31.897 116 77 1 1 116 306 419 9.02e-12 66.2
Msa0311500 MtrunA17_Chr8g0385051 33.333 105 66 2 1 102 443 546 1.16e-11 65.9
Msa0311500 MtrunA17_Chr7g0263521 35.577 104 65 2 2 103 245 348 1.38e-11 65.1
Msa0311500 MtrunA17_Chr1g0175411 32.787 122 78 3 1 118 507 628 1.53e-11 65.9
Msa0311500 MtrunA17_Chr2g0314611 35.965 114 70 3 1 112 653 765 1.55e-11 65.9
Msa0311500 MtrunA17_Chr2g0333181 40.187 107 63 1 1 106 209 315 1.75e-11 64.7
Msa0311500 MtrunA17_Chr4g0049601 31.667 120 76 1 1 114 526 645 1.76e-11 65.5
Msa0311500 MtrunA17_Chr7g0262521 34.615 104 66 2 1 102 516 619 1.81e-11 65.5
Msa0311500 MtrunA17_Chr7g0222321 31.250 112 76 1 1 111 900 1011 2.07e-11 65.5
Msa0311500 MtrunA17_Chr4g0073471 34.579 107 68 1 1 105 461 567 2.21e-11 65.1
Msa0311500 MtrunA17_Chr1g0189791 32.500 120 75 3 2 115 243 362 2.39e-11 65.1
Msa0311500 MtrunA17_Chr6g0456231 32.710 107 70 1 1 105 470 576 2.43e-11 65.1
Msa0311500 MtrunA17_Chr1g0196381 33.645 107 68 1 1 107 285 388 2.45e-11 64.7
Msa0311500 MtrunA17_Chr4g0069251 36.607 112 70 1 1 111 348 459 2.79e-11 64.7
Msa0311500 MtrunA17_Chr4g0049551 32.759 116 74 2 1 115 528 640 2.80e-11 65.1
Msa0311500 MtrunA17_Chr7g0236631 62.500 40 15 0 1 40 24 63 3.56e-11 58.9
Msa0311500 MtrunA17_Chr8g0365701 34.188 117 56 3 1 104 21 129 3.68e-11 62.4
Msa0311500 MtrunA17_Chr3g0125281 33.636 110 72 1 1 109 577 686 4.11e-11 64.3
Msa0311500 MtrunA17_Chr5g0428571 72.500 40 11 0 1 40 468 507 4.64e-11 63.9
Msa0311500 MtrunA17_Chr1g0183041 35.577 104 65 2 1 102 521 624 4.87e-11 64.3
Msa0311500 MtrunA17_Chr8g0366931 30.519 154 91 5 1 148 193 336 5.00e-11 63.2
Msa0311500 MtrunA17_Chr7g0248904 27.848 158 101 4 1 155 530 677 5.02e-11 64.3
Msa0311500 MtrunA17_Chr1g0175451 33.333 129 75 4 1 118 504 632 5.40e-11 63.9
Msa0311500 MtrunA17_Chr1g0181821 34.513 113 72 2 2 112 246 358 7.99e-11 62.8
Msa0311500 MtrunA17_Chr5g0433941 34.234 111 67 2 1 105 536 646 9.64e-11 63.2
Msa0311500 MtrunA17_Chr7g0275131 32.432 111 73 2 2 110 245 355 9.69e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311500 AT1G65790.1 57.692 156 58 3 1 148 688 843 2.48e-53 189
Msa0311500 AT1G65800.1 57.692 156 58 3 1 148 692 847 1.29e-48 175
Msa0311500 AT4G21380.1 55.769 156 61 3 1 148 695 850 4.17e-47 171
Msa0311500 AT4G11530.1 51.656 151 65 2 1 143 521 671 6.89e-43 158
Msa0311500 AT4G23150.1 53.793 145 65 2 1 144 505 648 1.74e-42 157
Msa0311500 AT1G11410.2 50.968 155 68 4 1 148 577 730 1.99e-41 154
Msa0311500 AT1G11410.4 50.968 155 68 4 1 148 699 852 2.80e-41 154
Msa0311500 AT1G11410.1 50.968 155 68 4 1 148 692 845 3.10e-41 154
Msa0311500 AT1G11410.3 50.968 155 68 4 1 148 668 821 3.17e-41 154
Msa0311500 AT4G23180.1 45.098 153 79 2 1 148 517 669 1.22e-40 152
Msa0311500 AT1G11330.2 49.333 150 74 2 1 148 693 842 1.29e-40 152
Msa0311500 AT1G11330.1 49.333 150 74 2 1 148 691 840 1.29e-40 152
Msa0311500 AT4G23140.2 53.623 138 59 2 1 133 526 663 1.95e-40 151
Msa0311500 AT4G23140.1 53.623 138 59 2 1 133 520 657 2.05e-40 151
Msa0311500 AT4G27300.1 54.667 150 63 4 1 148 669 815 4.70e-40 150
Msa0311500 AT4G23130.1 49.007 151 74 2 1 148 509 659 5.47e-40 150
Msa0311500 AT4G23130.2 49.007 151 74 2 1 148 513 663 6.14e-40 150
Msa0311500 AT4G23270.3 57.025 121 50 1 1 119 495 615 7.74e-40 149
Msa0311500 AT4G23270.2 57.025 121 50 1 1 119 495 615 7.78e-40 149
Msa0311500 AT4G23270.1 57.025 121 50 1 1 119 495 615 7.78e-40 149
Msa0311500 AT1G11340.1 49.669 151 72 3 1 148 684 833 1.92e-39 149
Msa0311500 AT4G23160.1 52.174 138 61 2 1 133 528 665 2.29e-39 148
Msa0311500 AT1G61610.1 48.993 149 75 1 1 148 694 842 3.27e-39 148
Msa0311500 AT4G03230.3 51.316 152 70 3 1 148 694 845 8.29e-39 147
Msa0311500 AT4G03230.7 51.316 152 70 3 1 148 702 853 9.23e-39 147
Msa0311500 AT4G03230.2 51.316 152 70 3 1 148 759 910 9.26e-39 147
Msa0311500 AT4G03230.6 51.316 152 70 3 1 148 759 910 9.26e-39 147
Msa0311500 AT4G03230.5 51.316 152 70 3 1 148 787 938 9.72e-39 147
Msa0311500 AT4G23310.1 52.239 134 59 3 1 129 677 810 1.05e-38 147
Msa0311500 AT4G23310.2 52.239 134 59 3 1 129 637 770 1.05e-38 147
Msa0311500 AT4G03230.4 51.316 152 70 3 1 148 859 1010 1.33e-38 147
Msa0311500 AT4G03230.1 51.316 152 70 3 1 148 859 1010 1.33e-38 147
Msa0311500 AT1G11350.1 48.684 152 72 3 1 148 681 830 1.45e-38 146
Msa0311500 AT4G23280.3 46.104 154 77 2 1 148 463 616 1.83e-38 145
Msa0311500 AT4G03230.8 51.316 152 70 3 1 148 701 852 2.03e-38 146
Msa0311500 AT4G23230.1 55.932 118 51 1 1 117 506 623 2.42e-38 145
Msa0311500 AT4G23280.1 46.104 154 77 2 1 148 513 666 3.67e-38 145
Msa0311500 AT4G23280.2 46.104 154 77 2 1 148 511 664 3.74e-38 144
Msa0311500 AT3G45860.1 54.918 122 52 1 1 119 520 641 1.22e-37 143
Msa0311500 AT1G11300.1 47.651 149 71 2 1 148 678 820 2.48e-37 143
Msa0311500 AT1G11300.2 47.651 149 71 2 1 148 663 805 2.53e-37 143
Msa0311500 AT4G23190.3 52.893 121 53 1 1 117 441 561 3.34e-37 141
Msa0311500 AT4G23190.4 52.893 121 53 1 1 117 441 561 3.34e-37 141
Msa0311500 AT4G23190.1 52.893 121 53 1 1 117 519 639 5.20e-37 141
Msa0311500 AT4G23300.1 54.545 121 51 1 1 117 522 642 8.48e-37 140
Msa0311500 AT4G11460.2 40.541 185 94 4 1 173 440 620 1.62e-36 140
Msa0311500 AT4G11460.3 40.541 185 94 4 1 173 515 695 2.54e-36 139
Msa0311500 AT4G11460.1 40.541 185 94 4 1 173 518 698 2.67e-36 139
Msa0311500 AT4G23290.1 52.893 121 55 1 1 119 489 609 4.52e-36 139
Msa0311500 AT4G23290.2 52.893 121 55 1 1 119 532 652 6.73e-36 138
Msa0311500 AT4G23260.2 47.403 154 73 3 1 148 497 648 7.69e-36 138
Msa0311500 AT4G23260.1 47.403 154 73 3 1 148 508 659 9.15e-36 138
Msa0311500 AT4G11470.2 51.200 125 59 1 1 123 513 637 9.69e-36 138
Msa0311500 AT4G23200.1 45.513 156 76 3 1 148 505 659 1.01e-35 137
Msa0311500 AT4G11470.1 51.200 125 59 1 1 123 508 632 1.06e-35 137
Msa0311500 AT4G00970.1 48.366 153 72 4 1 148 515 665 1.10e-35 137
Msa0311500 AT4G23240.2 52.066 121 56 1 1 119 197 317 2.09e-35 132
Msa0311500 AT1G11303.1 47.333 150 70 5 1 148 678 820 3.55e-35 137
Msa0311500 AT4G05200.1 47.794 136 65 2 1 130 516 651 3.67e-35 136
Msa0311500 AT4G05200.2 47.794 136 65 2 1 130 534 669 4.06e-35 136
Msa0311500 AT4G11490.1 51.261 119 56 1 1 117 490 608 2.63e-34 134
Msa0311500 AT4G00960.2 45.223 157 73 4 1 148 133 285 3.06e-34 128
Msa0311500 AT4G00960.3 45.223 157 73 4 1 148 140 292 4.15e-34 127
Msa0311500 AT4G27290.2 51.656 151 69 4 1 148 680 829 5.39e-34 133
Msa0311500 AT4G27290.1 51.656 151 69 4 1 148 634 783 5.62e-34 133
Msa0311500 AT4G21390.1 44.079 152 81 1 1 148 698 849 5.97e-34 133
Msa0311500 AT4G23240.1 52.066 121 56 1 1 119 504 624 6.12e-34 132
Msa0311500 AT4G38830.1 53.333 120 53 2 1 117 514 633 6.62e-34 132
Msa0311500 AT4G23320.2 50.413 121 58 1 1 119 352 472 1.07e-33 130
Msa0311500 AT4G23320.1 50.413 121 58 1 1 119 352 472 1.07e-33 130
Msa0311500 AT4G23320.3 50.413 121 58 1 1 119 373 493 1.26e-33 130
Msa0311500 AT4G21366.1 60.748 107 35 2 1 100 1 107 1.41e-33 120
Msa0311500 AT4G11480.4 43.478 161 76 3 1 148 490 648 1.84e-33 131
Msa0311500 AT4G11480.1 43.478 161 76 3 1 148 498 656 2.13e-33 131
Msa0311500 AT4G23220.1 44.966 149 76 2 1 143 505 653 2.19e-33 131
Msa0311500 AT4G11480.3 43.478 161 76 3 1 148 493 651 2.25e-33 131
Msa0311500 AT4G00960.1 45.223 157 73 4 1 148 227 379 2.59e-33 127
Msa0311500 AT4G23250.1 43.396 159 79 2 1 148 528 686 2.61e-33 131
Msa0311500 AT4G23250.3 48.120 133 67 1 1 131 523 655 1.21e-32 129
Msa0311500 AT4G23250.2 48.120 133 67 1 1 131 523 655 1.60e-32 129
Msa0311500 AT4G21400.8 45.752 153 77 3 1 148 421 572 4.41e-31 124
Msa0311500 AT4G21400.7 45.752 153 77 3 1 148 522 673 5.54e-31 124
Msa0311500 AT4G21400.2 45.752 153 77 3 1 148 520 671 6.24e-31 124
Msa0311500 AT4G21400.1 45.752 153 77 3 1 148 532 683 6.94e-31 124
Msa0311500 AT4G21410.1 46.622 148 73 4 1 143 403 549 1.41e-30 122
Msa0311500 AT4G21410.3 46.622 148 73 4 1 143 528 674 1.83e-30 122
Msa0311500 AT4G23210.3 43.671 158 77 4 1 157 527 673 2.47e-30 122
Msa0311500 AT1G61490.3 46.309 149 76 3 1 148 509 654 2.78e-30 122
Msa0311500 AT1G67520.5 46.104 154 77 4 1 148 428 581 3.06e-30 121
Msa0311500 AT1G67520.8 46.104 154 77 4 1 148 457 610 3.09e-30 122
Msa0311500 AT1G67520.7 46.104 154 77 4 1 148 457 610 3.09e-30 122
Msa0311500 AT1G61430.1 46.309 149 76 3 1 148 661 806 3.76e-30 122
Msa0311500 AT1G61430.9 46.309 149 76 3 1 148 658 803 3.86e-30 122
Msa0311500 AT1G61430.11 46.309 149 76 3 1 148 635 780 3.93e-30 122
Msa0311500 AT1G61430.12 46.309 149 76 3 1 148 635 780 3.93e-30 122
Msa0311500 AT1G61430.13 46.309 149 76 3 1 148 635 780 3.93e-30 122
Msa0311500 AT1G61490.6 46.309 149 76 3 1 148 633 778 4.07e-30 122
Msa0311500 AT1G61490.7 46.309 149 76 3 1 148 633 778 4.07e-30 122
Msa0311500 AT1G61490.4 46.309 149 76 3 1 148 659 804 4.28e-30 122
Msa0311500 AT1G61490.1 46.309 149 76 3 1 148 659 804 4.28e-30 122
Msa0311500 AT1G61490.2 46.309 149 76 3 1 148 659 804 4.28e-30 122
Msa0311500 AT1G61490.5 46.309 149 76 3 1 148 659 804 4.28e-30 122
Msa0311500 AT1G67520.6 46.104 154 77 4 1 148 672 825 4.96e-30 122
Msa0311500 AT1G67520.4 46.104 154 77 4 1 148 622 775 5.23e-30 121
Msa0311500 AT1G67520.3 46.104 154 77 4 1 148 665 818 5.42e-30 121
Msa0311500 AT4G21230.1 43.333 150 74 2 1 148 502 642 7.38e-30 120
Msa0311500 AT3G16030.1 44.516 155 79 4 1 148 696 850 9.90e-30 120
Msa0311500 AT1G61390.2 43.919 148 78 3 1 148 521 663 1.28e-29 120
Msa0311500 AT1G61400.2 44.966 149 78 3 1 148 677 822 1.39e-29 120
Msa0311500 AT3G16030.6 44.516 155 79 4 1 148 717 871 1.50e-29 120
Msa0311500 AT1G61400.1 44.966 149 78 3 1 148 669 814 1.52e-29 120
Msa0311500 AT3G16030.2 44.516 155 79 4 1 148 573 727 1.54e-29 120
Msa0311500 AT1G61390.1 43.919 148 78 3 1 148 689 831 1.66e-29 120
Msa0311500 AT1G61420.3 44.295 149 78 3 1 148 513 657 3.17e-29 119
Msa0311500 AT1G61420.5 44.295 149 78 3 1 148 515 659 3.18e-29 119
Msa0311500 AT1G61420.1 44.295 149 78 3 1 148 663 807 5.58e-29 118
Msa0311500 AT1G61420.2 44.295 149 78 3 1 148 665 809 6.02e-29 118
Msa0311500 AT1G61420.4 44.295 149 78 3 1 148 665 809 6.02e-29 118
Msa0311500 AT1G61370.2 44.966 149 77 4 1 148 519 663 2.72e-28 116
Msa0311500 AT4G11900.9 48.305 118 59 2 1 117 637 753 2.80e-28 116
Msa0311500 AT4G11900.1 48.305 118 59 2 1 117 706 822 3.10e-28 116
Msa0311500 AT1G61500.1 44.966 149 77 3 1 148 660 804 3.31e-28 116
Msa0311500 AT1G61500.3 44.966 149 77 3 1 148 665 809 3.48e-28 116
Msa0311500 AT1G61500.2 44.966 149 77 3 1 148 642 786 3.52e-28 116
Msa0311500 AT1G61370.1 44.966 149 77 4 1 148 670 814 3.87e-28 116
Msa0311500 AT1G61550.1 44.295 149 78 3 1 148 658 802 9.17e-28 115
Msa0311500 AT1G11280.3 47.020 151 73 4 1 148 662 808 1.65e-27 114
Msa0311500 AT1G11280.1 47.020 151 73 4 1 148 684 830 1.78e-27 114
Msa0311500 AT1G11280.2 47.020 151 73 4 1 148 674 820 1.84e-27 114
Msa0311500 AT1G11280.4 47.020 151 73 4 1 148 672 818 1.87e-27 114
Msa0311500 AT1G61440.1 43.624 149 80 3 1 148 647 792 4.69e-27 113
Msa0311500 AT1G61440.3 43.624 149 80 3 1 148 652 797 4.70e-27 113
Msa0311500 AT1G61440.2 43.624 149 80 3 1 148 677 822 4.96e-27 113
Msa0311500 AT1G61480.1 43.624 149 79 3 1 148 665 809 9.65e-27 112
Msa0311500 AT1G61380.2 42.000 150 84 3 1 148 510 658 1.18e-25 108
Msa0311500 AT1G61380.1 42.000 150 84 3 1 148 657 805 1.44e-25 108
Msa0311500 AT1G70740.1 44.444 117 64 1 1 116 230 346 1.57e-25 107
Msa0311500 AT4G04510.1 37.838 148 85 3 1 148 508 648 2.79e-25 107
Msa0311500 AT4G04510.2 37.838 148 85 3 1 148 510 650 3.05e-25 107
Msa0311500 AT4G04570.1 43.262 141 75 3 1 141 517 652 5.80e-25 106
Msa0311500 AT4G04540.4 42.553 141 76 3 1 141 493 628 7.18e-25 106
Msa0311500 AT4G04540.1 42.553 141 76 3 1 141 522 657 8.98e-25 106
Msa0311500 AT4G04490.1 40.260 154 82 5 1 148 509 658 1.35e-24 105
Msa0311500 AT1G61360.1 43.357 143 77 3 1 140 667 808 8.46e-24 103
Msa0311500 AT1G61360.2 43.357 143 77 3 1 140 586 727 1.01e-23 103
Msa0311500 AT1G61360.3 43.357 143 77 3 1 140 586 727 1.01e-23 103
Msa0311500 AT1G61360.4 43.357 143 77 3 1 140 586 727 1.01e-23 103
Msa0311500 AT1G70740.2 39.535 129 65 2 1 116 218 346 2.55e-23 100
Msa0311500 AT4G28670.1 38.655 119 72 1 1 118 503 621 9.86e-20 90.9
Msa0311500 AT1G07650.4 39.831 118 70 1 1 117 635 752 1.72e-19 90.5
Msa0311500 AT1G07650.3 39.831 118 70 1 1 117 822 939 1.89e-19 90.5
Msa0311500 AT1G07650.1 39.831 118 70 1 1 117 848 965 2.02e-19 90.5
Msa0311500 AT1G07650.2 39.831 118 70 1 1 117 854 971 2.16e-19 90.5
Msa0311500 AT1G70530.1 36.290 124 74 3 1 124 491 609 5.80e-19 88.6
Msa0311500 AT1G61460.1 42.063 126 68 3 24 148 628 749 7.39e-19 88.6
Msa0311500 AT1G53440.1 39.640 111 66 1 1 110 836 946 3.72e-18 86.7
Msa0311500 AT4G04500.1 40.678 118 64 3 1 112 514 631 4.38e-18 86.3
Msa0311500 AT1G53430.2 39.640 111 66 1 1 110 797 907 5.11e-18 86.3
Msa0311500 AT1G53430.1 39.640 111 66 1 1 110 838 948 5.84e-18 85.9
Msa0311500 AT1G56145.2 38.655 119 71 2 1 118 881 998 7.01e-17 82.8
Msa0311500 AT1G56145.1 38.655 119 71 2 1 118 854 971 7.89e-17 82.4
Msa0311500 AT1G56145.3 38.655 119 71 2 1 118 751 868 9.04e-17 82.4
Msa0311500 AT1G16670.1 33.333 120 78 2 1 118 212 331 1.46e-16 80.9
Msa0311500 AT5G40380.1 35.772 123 73 2 1 118 483 604 3.20e-16 80.5
Msa0311500 AT1G70520.1 35.200 125 74 2 1 118 493 617 6.45e-16 79.7
Msa0311500 AT1G56120.1 36.975 119 73 2 1 118 877 994 8.66e-16 79.3
Msa0311500 AT4G11890.4 37.391 115 66 2 1 112 94 205 9.84e-16 76.3
Msa0311500 AT1G56120.2 36.975 119 73 2 1 118 859 976 9.87e-16 79.3
Msa0311500 AT1G56120.3 36.975 119 73 2 1 118 711 828 1.03e-15 79.0
Msa0311500 AT1G29750.1 38.583 127 71 4 1 125 835 956 1.03e-15 79.3
Msa0311500 AT1G29750.2 38.583 127 71 4 1 125 850 971 1.08e-15 79.0
Msa0311500 AT5G10290.1 36.111 108 66 1 1 105 460 567 1.74e-15 78.2
Msa0311500 AT5G10290.2 36.111 108 66 1 1 105 460 567 1.74e-15 78.2
Msa0311500 AT4G11890.2 37.391 115 66 2 1 112 207 318 3.82e-15 76.3
Msa0311500 AT4G11890.1 37.391 115 66 2 1 112 206 317 3.91e-15 76.3
Msa0311500 AT1G29720.1 34.746 118 76 1 1 117 840 957 3.91e-15 77.4
Msa0311500 AT4G11890.3 37.391 115 66 2 1 112 209 320 3.99e-15 76.3
Msa0311500 AT1G56140.1 36.134 119 74 2 1 118 860 977 4.41e-15 77.4
Msa0311500 AT3G14840.2 35.185 108 69 1 1 107 841 948 7.78e-15 76.6
Msa0311500 AT1G56130.2 36.134 119 74 2 1 118 861 978 9.53e-15 76.3
Msa0311500 AT1G29730.2 38.889 108 64 1 1 106 840 947 9.79e-15 76.3
Msa0311500 AT1G29730.1 38.889 108 64 1 1 106 808 915 1.03e-14 76.3
Msa0311500 AT1G56130.3 36.134 119 74 2 1 118 662 779 1.08e-14 75.9
Msa0311500 AT1G56130.1 36.134 119 74 2 1 118 713 830 1.17e-14 75.9
Msa0311500 AT3G09010.1 34.884 129 80 3 1 126 215 342 3.01e-14 73.9
Msa0311500 AT5G65240.2 35.185 108 67 1 1 105 454 561 4.85e-14 73.9
Msa0311500 AT5G65240.1 35.185 108 67 1 1 105 454 561 5.06e-14 73.6
Msa0311500 AT1G07870.1 33.871 124 80 2 2 123 275 398 1.30e-13 72.0
Msa0311500 AT1G07870.2 33.871 124 80 2 2 123 275 398 1.79e-13 72.0
Msa0311500 AT5G55830.1 30.496 141 89 2 1 139 536 669 1.86e-13 72.0
Msa0311500 AT1G29740.2 36.441 118 73 1 1 116 844 961 3.44e-13 71.6
Msa0311500 AT1G29740.1 36.441 118 73 1 1 116 844 961 3.56e-13 71.2
Msa0311500 AT1G60800.2 36.449 107 66 1 1 105 404 510 4.97e-13 70.5
Msa0311500 AT1G60800.1 33.835 133 73 2 1 118 471 603 5.62e-13 70.5
Msa0311500 AT2G13790.1 36.111 108 66 1 1 105 464 571 5.87e-13 70.5
Msa0311500 AT2G13800.4 36.111 108 66 1 1 105 328 435 7.85e-13 69.7
Msa0311500 AT2G13800.2 36.111 108 66 1 1 105 328 435 7.85e-13 69.7
Msa0311500 AT1G34210.1 37.273 110 62 2 1 105 475 582 8.71e-13 70.1
Msa0311500 AT1G34210.2 37.273 110 62 2 1 105 475 582 8.71e-13 70.1
Msa0311500 AT2G13800.3 36.111 108 66 1 1 105 445 552 9.29e-13 69.7
Msa0311500 AT2G13800.1 36.111 108 66 1 1 105 445 552 9.29e-13 69.7
Msa0311500 AT3G53380.1 36.290 124 64 2 1 113 543 662 1.06e-12 69.7
Msa0311500 AT1G61860.1 36.893 103 63 2 2 102 257 359 1.95e-12 68.2
Msa0311500 AT4G33430.1 37.273 110 62 2 1 105 459 566 2.70e-12 68.6
Msa0311500 AT1G80870.1 34.848 132 72 4 1 120 556 685 2.77e-12 68.6
Msa0311500 AT2G45590.1 34.375 128 74 3 1 123 548 670 2.96e-12 68.6
Msa0311500 AT4G33430.2 37.273 110 62 2 1 105 506 613 3.02e-12 68.2
Msa0311500 AT2G23950.1 37.383 107 65 1 1 105 465 571 3.08e-12 68.2
Msa0311500 AT1G55200.3 33.962 106 69 1 1 105 547 652 3.43e-12 68.2
Msa0311500 AT1G55200.4 33.962 106 69 1 1 105 547 652 3.43e-12 68.2
Msa0311500 AT1G55200.1 33.962 106 69 1 1 105 547 652 3.43e-12 68.2
Msa0311500 AT1G55200.2 33.962 106 69 1 1 105 547 652 3.43e-12 68.2
Msa0311500 AT4G30520.1 36.449 107 66 1 1 105 469 575 4.59e-12 67.8
Msa0311500 AT5G24080.2 25.676 148 108 2 1 146 699 846 7.79e-12 67.0
Msa0311500 AT5G01560.1 38.318 107 59 2 1 105 534 635 8.57e-12 67.0
Msa0311500 AT5G24080.3 27.500 120 86 1 1 119 572 691 8.86e-12 67.0
Msa0311500 AT5G24080.1 27.500 120 86 1 1 119 572 691 8.86e-12 67.0
Msa0311500 AT1G71830.1 35.185 108 67 1 1 105 472 579 1.02e-11 66.6
Msa0311500 AT3G58690.1 29.771 131 83 3 1 123 260 389 1.15e-11 65.9
Msa0311500 AT1G53420.1 33.010 103 68 1 1 102 793 895 1.25e-11 66.6
Msa0311500 AT4G23180.2 75.000 40 10 0 1 40 517 556 1.89e-11 65.9
Msa0311500 AT2G20300.1 33.654 104 67 2 1 102 513 616 2.33e-11 65.5
Msa0311500 AT5G42120.1 31.897 116 73 2 1 116 546 655 2.58e-11 65.5
Msa0311500 AT5G07280.1 33.333 102 66 1 3 102 1088 1189 2.64e-11 65.9
Msa0311500 AT4G23190.2 63.830 47 17 0 1 47 519 565 3.35e-11 65.1
Msa0311500 AT1G70460.1 38.182 110 63 2 1 105 520 629 3.97e-11 65.1
Msa0311500 AT3G25560.2 33.645 107 69 1 1 105 479 585 4.24e-11 64.7
Msa0311500 AT3G25560.1 33.645 107 69 1 1 105 478 584 4.27e-11 64.7
Msa0311500 AT1G11340.3 64.583 48 16 1 1 48 752 798 4.36e-11 64.7
Msa0311500 AT3G25560.3 33.645 107 69 1 1 105 478 584 5.25e-11 64.3
Msa0311500 AT5G63710.2 34.906 106 65 2 1 103 424 528 6.59e-11 63.9
Msa0311500 AT5G63710.4 34.906 106 65 2 1 103 424 528 6.59e-11 63.9
Msa0311500 AT5G63710.3 34.906 106 65 2 1 103 460 564 7.86e-11 63.9
Msa0311500 AT1G54820.1 31.429 105 68 2 1 102 325 428 8.27e-11 63.5
Msa0311500 AT5G63710.1 35.238 105 64 2 1 102 459 562 8.29e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTGTAATGAGTGGATT+TGG 0.254164 2_4:-6361880 Msa0311500:CDS
TTTCACCACAGTTGCAATAT+TGG 0.280385 2_4:+6361678 None:intergenic
AAAATCCCGGCAGGAGGTTC+TGG 0.293399 2_4:-6362008 Msa0311500:CDS
TTACATGTCCAAGGAGATTT+AGG 0.297491 2_4:+6364733 None:intergenic
ATCCCAAATCCACTCATTAC+AGG 0.309987 2_4:+6361877 None:intergenic
GTCACAGTTACAATAATAAA+TGG 0.321215 2_4:-6364235 Msa0311500:CDS
TATCCACCCATTGCATATTC+AGG 0.331655 2_4:+6364849 None:intergenic
ATTGCAACTGTGGTGAAATC+TGG 0.356412 2_4:-6361673 Msa0311500:CDS
ATCACCACTGATGGCATTAT+AGG 0.359159 2_4:+6364376 None:intergenic
TATTTACATATCAACAACTT+TGG 0.395132 2_4:-6362031 Msa0311500:CDS
AGGACAAAACCAGGGTGCTT+TGG 0.404889 2_4:+6364319 None:intergenic
TGAACCATTGGTCTGGTAGC+TGG 0.445043 2_4:+6361842 None:intergenic
GTATGTTTCATAACTGTCTC+TGG 0.451158 2_4:+6362143 None:intergenic
TTTGTCCTTGGAAGGAATCC+AGG 0.451930 2_4:-6364304 Msa0311500:CDS
ATGTAAATAATCATCGGCTT+TGG 0.457315 2_4:+6362045 None:intergenic
TTCATAACTGTCTCTGGTTG+AGG 0.459295 2_4:+6362149 None:intergenic
AATCAGTGTTGGAGGAAGAA+AGG 0.470073 2_4:+6362200 None:intergenic
AAACCAGGGTGCTTTGGTTG+TGG 0.472867 2_4:+6364325 None:intergenic
TGGATTTGGGATGATGATCT+TGG 0.474861 2_4:-6361866 Msa0311500:CDS
AACCTGTAATGAGTGGATTT+GGG 0.475169 2_4:-6361879 Msa0311500:CDS
GGTTCTGGAGATGTCGAGAT+TGG 0.477334 2_4:-6361993 Msa0311500:CDS
TAAATAATCATCGGCTTTGG+AGG 0.481374 2_4:+6362048 None:intergenic
GCAGATTCTGCAGCTGTGAA+TGG 0.482506 2_4:-6361749 Msa0311500:CDS
AGAAGGTTGAATGGCTTAAG+TGG 0.485150 2_4:-6361604 Msa0311500:CDS
ATTCAGCTGTTTCAAACTCA+AGG 0.499435 2_4:-6361814 Msa0311500:CDS
TCAGATGACCTAAATCTCCT+TGG 0.501201 2_4:-6364741 Msa0311500:CDS
GAAAGACAAGTGGAAAATGA+AGG 0.502111 2_4:-6361642 Msa0311500:CDS
ATAAGTGGAATGAAGAATAG+AGG 0.502594 2_4:-6364774 Msa0311500:CDS
CTGAGAAGAAGAAGGTTGAA+TGG 0.503200 2_4:-6361613 Msa0311500:CDS
GTTGAGGAAATCAGTGTTGG+AGG 0.510498 2_4:+6362192 None:intergenic
TGTGATAGGCATGGAGGCTA+TGG 0.514047 2_4:-6364519 Msa0311500:intron
GCTGAATAGCACTGAACCAT+TGG 0.516373 2_4:+6361830 None:intergenic
CATCTCCAGAACCTCCTGCC+GGG 0.526816 2_4:+6362003 None:intergenic
TGGAAGCATCCCTCGAGATG+TGG 0.536550 2_4:+6362086 None:intergenic
CGATTCACATGTGCATTCAA+AGG 0.538498 2_4:+6361776 None:intergenic
AGTGGCTTATCATAGCTAGC+TGG 0.540508 2_4:-6361586 Msa0311500:CDS
ACATCTCCAGAACCTCCTGC+CGG 0.541636 2_4:+6362002 None:intergenic
ATTCACCTGGATTCCTTCCA+AGG 0.546339 2_4:+6364299 None:intergenic
GTTATAAGATGCATACATGT+TGG 0.546731 2_4:-6364433 Msa0311500:CDS
TTCCTTCCAAGGACAAAACC+AGG 0.548756 2_4:+6364310 None:intergenic
GCATGGAGGCTATGGAATGA+AGG 0.549602 2_4:-6364511 Msa0311500:CDS
CTCGTGCTAGAAATCATAAG+TGG 0.549697 2_4:-6364789 Msa0311500:CDS
GTTGATATGTAAATAATCAT+CGG 0.552230 2_4:+6362039 None:intergenic
AGTAGACATTTGCAATGTTG+AGG 0.554319 2_4:+6362176 None:intergenic
TGTTGGAGGAAGAAAGGAAG+AGG 0.555347 2_4:+6362206 None:intergenic
ATAGCACTGAACCATTGGTC+TGG 0.560828 2_4:+6361835 None:intergenic
TTCAACATCATCACCACTGA+TGG 0.563831 2_4:+6364367 None:intergenic
GGAAGCATCCCTCGAGATGT+GGG 0.565915 2_4:+6362087 None:intergenic
AGTTATGAAACATACTTCAA+TGG 0.565987 2_4:-6362135 Msa0311500:CDS
TTGCAACTGTGGTGAAATCT+GGG 0.567519 2_4:-6361672 Msa0311500:CDS
TTCAGCTGTTTCAAACTCAA+GGG 0.568525 2_4:-6361813 Msa0311500:CDS
TCAACAACTTTGGAAAATCC+CGG 0.571931 2_4:-6362021 Msa0311500:CDS
CAGTCATTGCCCACATCTCG+AGG 0.573852 2_4:-6362096 Msa0311500:CDS
GACTCAGATTCACGAATCAC+AGG 0.588562 2_4:+6361725 None:intergenic
ATGTCTCCTGAATATGCAAT+GGG 0.590584 2_4:-6364855 Msa0311500:CDS
ATGGAATGAAGGAAAGGCAA+TGG 0.592016 2_4:-6364500 Msa0311500:CDS
CAACTTTGGAAAATCCCGGC+AGG 0.595168 2_4:-6362017 Msa0311500:CDS
GGTGTTGGCTGAGAAGAAGA+AGG 0.595468 2_4:-6361621 Msa0311500:CDS
AAAACAAAACCTGTAATGAG+TGG 0.596191 2_4:-6361886 Msa0311500:CDS
GGGAGAAGAAGAAAGACAAG+TGG 0.599951 2_4:-6361652 Msa0311500:CDS
CAGTTACAATAATAAATGGC+AGG 0.600775 2_4:-6364231 Msa0311500:intron
TATGAAACATACTTCAATGG+TGG 0.624239 2_4:-6362132 Msa0311500:CDS
TATGTCTCCTGAATATGCAA+TGG 0.624637 2_4:-6364856 Msa0311500:CDS
GAAGATGAATCAGATTCACC+TGG 0.625356 2_4:+6364286 None:intergenic
TGGTCCAGCTACCAGACCAA+TGG 0.626139 2_4:-6361846 Msa0311500:CDS
GAGGCTATGGAATGAAGGAA+AGG 0.626682 2_4:-6364506 Msa0311500:CDS
CTTTGGAAAATCCCGGCAGG+AGG 0.629520 2_4:-6362014 Msa0311500:CDS
GAATCTGAGTCTGCAAAGTG+TGG 0.640115 2_4:-6361713 Msa0311500:CDS
CGAGATGTGGGCAATGACTG+AGG 0.643400 2_4:+6362099 None:intergenic
AATGTTGAGGAAATCAGTGT+TGG 0.645116 2_4:+6362189 None:intergenic
AGTCATTGCCCACATCTCGA+GGG 0.651393 2_4:-6362095 Msa0311500:CDS
TTGCCACAACCAAAGCACCC+TGG 0.664907 2_4:-6364328 Msa0311500:CDS
TCTCCTGAATATGCAATGGG+TGG 0.675092 2_4:-6364852 Msa0311500:CDS
GGAGGTAAACAACGACACAA+TGG 0.677742 2_4:+6362066 None:intergenic
CAGACCTATAATGCCATCAG+TGG 0.681745 2_4:-6364380 Msa0311500:CDS
GCAAACCAATATTGCAACTG+TGG 0.689023 2_4:-6361683 Msa0311500:CDS
CAAGTGGAAAATGAAGGTGT+TGG 0.710928 2_4:-6361636 Msa0311500:CDS
TCCTTCCAAGGACAAAACCA+GGG 0.712420 2_4:+6364311 None:intergenic
GATGTGGGCAATGACTGAGG+AGG 0.714971 2_4:+6362102 None:intergenic
ATGTGTTGTGATAGGCATGG+AGG 0.750473 2_4:-6364525 Msa0311500:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAGAAAAATGTTATA+AGG + chr2_4:6362760-6362779 None:intergenic 10.0%
!!! AGAATTTTTTTCTTTTTTTA+GGG + chr2_4:6363015-6363034 None:intergenic 10.0%
!!! AAGAATTTTTTTCTTTTTTT+AGG + chr2_4:6363016-6363035 None:intergenic 10.0%
!!! ATTCCATCAAAATATTTTAA+AGG - chr2_4:6362920-6362939 Msa0311500:intron 15.0%
!!! TTCCATCAAAATATTTTAAA+GGG - chr2_4:6362921-6362940 Msa0311500:intron 15.0%
!!! GAATTTTTTTCTTTTTTTAG+GGG + chr2_4:6363014-6363033 None:intergenic 15.0%
!!! TTATTTTTTGTTTGTTCCTA+TGG - chr2_4:6362413-6362432 Msa0311500:intron 20.0%
!!! TCCATCAAAATATTTTAAAG+GGG - chr2_4:6362922-6362941 Msa0311500:intron 20.0%
!! AAGTTAACATTGTTCTTAAA+GGG - chr2_4:6363219-6363238 Msa0311500:intron 20.0%
!!! GATTCAATCACTTTTAAAAT+CGG + chr2_4:6363502-6363521 None:intergenic 20.0%
!! AAATTGCTCAAACATATATT+CGG + chr2_4:6363589-6363608 None:intergenic 20.0%
!! TTGACTAGAAAAATCAAATT+CGG + chr2_4:6363740-6363759 None:intergenic 20.0%
!!! TTTGAGATGTATTTGTAATT+TGG - chr2_4:6363792-6363811 Msa0311500:intron 20.0%
!! TTGAGATGTATTTGTAATTT+GGG - chr2_4:6363793-6363812 Msa0311500:intron 20.0%
!! GTTGATATGTAAATAATCAT+CGG + chr2_4:6364372-6364391 None:intergenic 20.0%
!! TATTTACATATCAACAACTT+TGG - chr2_4:6364377-6364396 Msa0311500:CDS 20.0%
!! AAATCTGATGTTTTCAGTTT+TGG - chr2_4:6361592-6361611 Msa0311500:CDS 25.0%
! ATTAGATGCATGTGTAAATT+TGG + chr2_4:6361728-6361747 None:intergenic 25.0%
! GTAGCAAAATAAAATGTTCT+AGG - chr2_4:6361813-6361832 Msa0311500:CDS 25.0%
! TTAGCACAAAATGATGTTAA+GGG + chr2_4:6361844-6361863 None:intergenic 25.0%
! ATTAGCACAAAATGATGTTA+AGG + chr2_4:6361845-6361864 None:intergenic 25.0%
!!! TTTTTTCTTGGACACATATT+AGG + chr2_4:6362001-6362020 None:intergenic 25.0%
! GTCACAGTTACAATAATAAA+TGG - chr2_4:6362173-6362192 Msa0311500:CDS 25.0%
!!! ATGAATCTGAGACAAAATTT+TGG + chr2_4:6362267-6362286 None:intergenic 25.0%
! TTCAATTTACACTTCAGTAA+AGG + chr2_4:6362356-6362375 None:intergenic 25.0%
!!! ATTGAAGAGTGTTTTTTGTT+AGG - chr2_4:6362370-6362389 Msa0311500:intron 25.0%
!!! TCCCCTTTAAAATATTTTGA+TGG + chr2_4:6362926-6362945 None:intergenic 25.0%
!!! TTTTTTAGGGGAAATTTCAA+GGG + chr2_4:6363002-6363021 None:intergenic 25.0%
!!! TTTTTTTAGGGGAAATTTCA+AGG + chr2_4:6363003-6363022 None:intergenic 25.0%
! GTTTCTTATCTTGTATCTAA+GGG + chr2_4:6363071-6363090 None:intergenic 25.0%
! AGTTTCTTATCTTGTATCTA+AGG + chr2_4:6363072-6363091 None:intergenic 25.0%
! CAAGTTAACATTGTTCTTAA+AGG - chr2_4:6363218-6363237 Msa0311500:intron 25.0%
! AGAAGAAAACTAGAAAGAAA+AGG + chr2_4:6363663-6363682 None:intergenic 25.0%
! TGACTAGAAAAATCAAATTC+GGG + chr2_4:6363739-6363758 None:intergenic 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr2_4:6363895-6363914 None:intergenic 25.0%
! ATTAACTGATTAAACTTTGC+AGG + chr2_4:6363896-6363915 None:intergenic 25.0%
! AGTTATGAAACATACTTCAA+TGG - chr2_4:6364273-6364292 Msa0311500:CDS 25.0%
! TTAATCACAGTGACTAATAT+TGG - chr2_4:6364477-6364496 Msa0311500:CDS 25.0%
ATAAGTGGAATGAAGAATAG+AGG - chr2_4:6361634-6361653 Msa0311500:CDS 30.0%
TAGCACAAAATGATGTTAAG+GGG + chr2_4:6361843-6361862 None:intergenic 30.0%
ATTATCCTATGTGTTGTGAT+AGG - chr2_4:6361875-6361894 Msa0311500:CDS 30.0%
GTTATAAGATGCATACATGT+TGG - chr2_4:6361975-6361994 Msa0311500:intron 30.0%
!!! GTCTGTCTTCTATTTTTTCT+TGG + chr2_4:6362013-6362032 None:intergenic 30.0%
CAGTTACAATAATAAATGGC+AGG - chr2_4:6362177-6362196 Msa0311500:CDS 30.0%
TACAATAATAAATGGCAGGT+AGG - chr2_4:6362181-6362200 Msa0311500:CDS 30.0%
!! TTACAGACTAAAAGTGTTGA+CGG - chr2_4:6362839-6362858 Msa0311500:intron 30.0%
TTTATACGAGATTGTTGAGT+TGG + chr2_4:6363322-6363341 None:intergenic 30.0%
AAAGAAGTTGGATTGTGAAA+AGG + chr2_4:6363354-6363373 None:intergenic 30.0%
TTTCATGACAGAAAAGAAGT+TGG + chr2_4:6363366-6363385 None:intergenic 30.0%
CTGCTGCTGAAAAAATTTAA+CGG + chr2_4:6363444-6363463 None:intergenic 30.0%
!!! TTCTAGTTTTCTTCTCTTCA+TGG - chr2_4:6363668-6363687 Msa0311500:intron 30.0%
!!! TCTAGTTTTCTTCTCTTCAT+GGG - chr2_4:6363669-6363688 Msa0311500:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr2_4:6363894-6363913 None:intergenic 30.0%
TCTTGAAGAAGAAGAATGAA+GGG + chr2_4:6364074-6364093 None:intergenic 30.0%
TTCTTGAAGAAGAAGAATGA+AGG + chr2_4:6364075-6364094 None:intergenic 30.0%
TATGAAACATACTTCAATGG+TGG - chr2_4:6364276-6364295 Msa0311500:CDS 30.0%
!! ATGTAAATAATCATCGGCTT+TGG + chr2_4:6364366-6364385 None:intergenic 30.0%
ACAGTGACTAATATTGGAAT+TGG - chr2_4:6364483-6364502 Msa0311500:CDS 30.0%
GACTAATATTGGAATTGGTT+TGG - chr2_4:6364488-6364507 Msa0311500:CDS 30.0%
AAAACAAAACCTGTAATGAG+TGG - chr2_4:6364522-6364541 Msa0311500:intron 30.0%
ATGTCTCCTGAATATGCAAT+GGG - chr2_4:6361553-6361572 Msa0311500:CDS 35.0%
TTACATGTCCAAGGAGATTT+AGG + chr2_4:6361678-6361697 None:intergenic 35.0%
! TTTGGTTTACACCGTAAACT+AGG + chr2_4:6361710-6361729 None:intergenic 35.0%
AAGGTTGTCTTACATTCCAT+AGG + chr2_4:6362432-6362451 None:intergenic 35.0%
ACCTTTGTTCTGTGACTATT+AGG - chr2_4:6362447-6362466 Msa0311500:intron 35.0%
ACCTAATAGTCACAGAACAA+AGG + chr2_4:6362451-6362470 None:intergenic 35.0%
CTGTTGATGTCTTTGGTTAT+TGG - chr2_4:6362532-6362551 Msa0311500:intron 35.0%
AGAGACATAGAGAACAAATC+TGG - chr2_4:6362627-6362646 Msa0311500:intron 35.0%
! TGACGACGACAAATTTTAAG+AGG - chr2_4:6362793-6362812 Msa0311500:intron 35.0%
TTAAAGGGGACAACAAAACA+CGG - chr2_4:6362936-6362955 Msa0311500:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+GGG + chr2_4:6363210-6363229 None:intergenic 35.0%
! TAAAGGGTTTTCCTATCTTG+TGG - chr2_4:6363235-6363254 Msa0311500:intron 35.0%
AACGGAAGTTAACTGTTGTT+GGG + chr2_4:6363426-6363445 None:intergenic 35.0%
TAACGGAAGTTAACTGTTGT+TGG + chr2_4:6363427-6363446 None:intergenic 35.0%
TTGCTCAAACATATATTCGG+TGG + chr2_4:6363586-6363605 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr2_4:6363867-6363886 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr2_4:6363868-6363887 None:intergenic 35.0%
TGACATGGCAGTCATTAATT+GGG + chr2_4:6363933-6363952 None:intergenic 35.0%
ATGACATGGCAGTCATTAAT+TGG + chr2_4:6363934-6363953 None:intergenic 35.0%
!!! GCATTTTCGTCATTTTTCCA+TGG + chr2_4:6364052-6364071 None:intergenic 35.0%
AATGTTGAGGAAATCAGTGT+TGG + chr2_4:6364222-6364241 None:intergenic 35.0%
AGTAGACATTTGCAATGTTG+AGG + chr2_4:6364235-6364254 None:intergenic 35.0%
GTATGTTTCATAACTGTCTC+TGG + chr2_4:6364268-6364287 None:intergenic 35.0%
!! TAAATAATCATCGGCTTTGG+AGG + chr2_4:6364363-6364382 None:intergenic 35.0%
! TCAACAACTTTGGAAAATCC+CGG - chr2_4:6364387-6364406 Msa0311500:CDS 35.0%
! AAACCTGTAATGAGTGGATT+TGG - chr2_4:6364528-6364547 Msa0311500:intron 35.0%
! AACCTGTAATGAGTGGATTT+GGG - chr2_4:6364529-6364548 Msa0311500:intron 35.0%
! ATTCAGCTGTTTCAAACTCA+AGG - chr2_4:6364594-6364613 Msa0311500:intron 35.0%
! TTCAGCTGTTTCAAACTCAA+GGG - chr2_4:6364595-6364614 Msa0311500:intron 35.0%
TTTCACCACAGTTGCAATAT+TGG + chr2_4:6364733-6364752 None:intergenic 35.0%
GAAAGACAAGTGGAAAATGA+AGG - chr2_4:6364766-6364785 Msa0311500:CDS 35.0%
TATCCACCCATTGCATATTC+AGG + chr2_4:6361562-6361581 None:intergenic 40.0%
CTCGTGCTAGAAATCATAAG+TGG - chr2_4:6361619-6361638 Msa0311500:CDS 40.0%
TCAGATGACCTAAATCTCCT+TGG - chr2_4:6361667-6361686 Msa0311500:CDS 40.0%
AAGCGAAAACGCCTAGTTTA+CGG - chr2_4:6361696-6361715 Msa0311500:CDS 40.0%
ATGGAATGAAGGAAAGGCAA+TGG - chr2_4:6361908-6361927 Msa0311500:intron 40.0%
ATCACCACTGATGGCATTAT+AGG + chr2_4:6362035-6362054 None:intergenic 40.0%
TTCAACATCATCACCACTGA+TGG + chr2_4:6362044-6362063 None:intergenic 40.0%
GAAGATGAATCAGATTCACC+TGG + chr2_4:6362125-6362144 None:intergenic 40.0%
CATGAGTCTGTTGATGTCTT+TGG - chr2_4:6362525-6362544 Msa0311500:intron 40.0%
CTATGTCTCTATGATGAGCT+TGG + chr2_4:6362617-6362636 None:intergenic 40.0%
!! CAATGTTAACTTGTGCCCTT+AGG + chr2_4:6363211-6363230 None:intergenic 40.0%
! TTCCTATCTTGTGGCCTTAA+CGG - chr2_4:6363244-6363263 Msa0311500:intron 40.0%
!!! TGGCCTTAACGGATTGTTTT+CGG - chr2_4:6363255-6363274 Msa0311500:intron 40.0%
TTCCCGAAAACAATCCGTTA+AGG + chr2_4:6363261-6363280 None:intergenic 40.0%
ACTTTGCAGGGGCAAAAAAA+AGG + chr2_4:6363883-6363902 None:intergenic 40.0%
GCAGTCATTAATTGGGTCAA+AGG + chr2_4:6363926-6363945 None:intergenic 40.0%
ACGTCAGTAATCAGATGACA+TGG + chr2_4:6363948-6363967 None:intergenic 40.0%
ATGTCATCTGATTACTGACG+TGG - chr2_4:6363947-6363966 Msa0311500:intron 40.0%
ACTTGTGTGACTCAGCAAAT+GGG - chr2_4:6363989-6364008 Msa0311500:intron 40.0%
GAGAACAAGAAGGAAATCAG+CGG + chr2_4:6364121-6364140 None:intergenic 40.0%
AAGGGAAGAAGAGAACAAGA+AGG + chr2_4:6364131-6364150 None:intergenic 40.0%
ACGATCTGCAGAAGAAGAAA+GGG + chr2_4:6364149-6364168 None:intergenic 40.0%
! AATCAGTGTTGGAGGAAGAA+AGG + chr2_4:6364211-6364230 None:intergenic 40.0%
TTCATAACTGTCTCTGGTTG+AGG + chr2_4:6364262-6364281 None:intergenic 40.0%
GAGATTGGCAAGTAAGTTGT+AGG - chr2_4:6364430-6364449 Msa0311500:CDS 40.0%
ATCCCAAATCCACTCATTAC+AGG + chr2_4:6364534-6364553 None:intergenic 40.0%
! TGGATTTGGGATGATGATCT+TGG - chr2_4:6364542-6364561 Msa0311500:intron 40.0%
CGATTCACATGTGCATTCAA+AGG + chr2_4:6364635-6364654 None:intergenic 40.0%
GCAAACCAATATTGCAACTG+TGG - chr2_4:6364725-6364744 Msa0311500:intron 40.0%
ATTGCAACTGTGGTGAAATC+TGG - chr2_4:6364735-6364754 Msa0311500:intron 40.0%
TTGCAACTGTGGTGAAATCT+GGG - chr2_4:6364736-6364755 Msa0311500:intron 40.0%
! CAAGTGGAAAATGAAGGTGT+TGG - chr2_4:6364772-6364791 Msa0311500:CDS 40.0%
CTGAGAAGAAGAAGGTTGAA+TGG - chr2_4:6364795-6364814 Msa0311500:CDS 40.0%
AGAAGGTTGAATGGCTTAAG+TGG - chr2_4:6364804-6364823 Msa0311500:CDS 40.0%
TCTCCTGAATATGCAATGGG+TGG - chr2_4:6361556-6361575 Msa0311500:CDS 45.0%
! CGTTTTCGCTTACATGTCCA+AGG + chr2_4:6361687-6361706 None:intergenic 45.0%
CCATGCCTATCACAACACAT+AGG + chr2_4:6361883-6361902 None:intergenic 45.0%
CCTATGTGTTGTGATAGGCA+TGG - chr2_4:6361880-6361899 Msa0311500:CDS 45.0%
ATGTGTTGTGATAGGCATGG+AGG - chr2_4:6361883-6361902 Msa0311500:CDS 45.0%
GAGGCTATGGAATGAAGGAA+AGG - chr2_4:6361902-6361921 Msa0311500:intron 45.0%
CAGACCTATAATGCCATCAG+TGG - chr2_4:6362028-6362047 Msa0311500:CDS 45.0%
TCCTTCCAAGGACAAAACCA+GGG + chr2_4:6362100-6362119 None:intergenic 45.0%
TTCCTTCCAAGGACAAAACC+AGG + chr2_4:6362101-6362120 None:intergenic 45.0%
TTTGTCCTTGGAAGGAATCC+AGG - chr2_4:6362104-6362123 Msa0311500:CDS 45.0%
ATTCACCTGGATTCCTTCCA+AGG + chr2_4:6362112-6362131 None:intergenic 45.0%
ATCCTTATCTCGTGCCCTAA+GGG - chr2_4:6363193-6363212 Msa0311500:intron 45.0%
ATCCGTTAAGGCCACAAGAT+AGG + chr2_4:6363249-6363268 None:intergenic 45.0%
!!! GGCCTTAACGGATTGTTTTC+GGG - chr2_4:6363256-6363275 Msa0311500:intron 45.0%
CTGCACTTGAAAAAGCTGAG+CGG - chr2_4:6363550-6363569 Msa0311500:intron 45.0%
TGTGATTCGTCCCTGCAAAT+AGG - chr2_4:6363823-6363842 Msa0311500:intron 45.0%
GTGATTCGTCCCTGCAAATA+GGG - chr2_4:6363824-6363843 Msa0311500:intron 45.0%
TGATTCGTCCCTGCAAATAG+GGG - chr2_4:6363825-6363844 Msa0311500:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG + chr2_4:6363836-6363855 None:intergenic 45.0%
TTTAAGCGACCCCTATTTGC+AGG + chr2_4:6363837-6363856 None:intergenic 45.0%
CACTTGTGTGACTCAGCAAA+TGG - chr2_4:6363988-6364007 Msa0311500:intron 45.0%
TCCATGGTCTCAGATGAAGA+GGG + chr2_4:6364036-6364055 None:intergenic 45.0%
TTCCATGGTCTCAGATGAAG+AGG + chr2_4:6364037-6364056 None:intergenic 45.0%
GACGATCTGCAGAAGAAGAA+AGG + chr2_4:6364150-6364169 None:intergenic 45.0%
TGTTGGAGGAAGAAAGGAAG+AGG + chr2_4:6364205-6364224 None:intergenic 45.0%
! GTTGAGGAAATCAGTGTTGG+AGG + chr2_4:6364219-6364238 None:intergenic 45.0%
GGAGGTAAACAACGACACAA+TGG + chr2_4:6364345-6364364 None:intergenic 45.0%
! ATAGCACTGAACCATTGGTC+TGG + chr2_4:6364576-6364595 None:intergenic 45.0%
! GCTGAATAGCACTGAACCAT+TGG + chr2_4:6364581-6364600 None:intergenic 45.0%
GACTCAGATTCACGAATCAC+AGG + chr2_4:6364686-6364705 None:intergenic 45.0%
GAATCTGAGTCTGCAAAGTG+TGG - chr2_4:6364695-6364714 Msa0311500:intron 45.0%
GGGAGAAGAAGAAAGACAAG+TGG - chr2_4:6364756-6364775 Msa0311500:CDS 45.0%
AGTGGCTTATCATAGCTAGC+TGG - chr2_4:6364822-6364841 Msa0311500:CDS 45.0%
!! AAAAATAATAATAAAAAGTT+TGG - chr2_4:6362661-6362680 Msa0311500:intron 5.0%
!! AAAATAATAATAAAAAGTTT+GGG - chr2_4:6362662-6362681 Msa0311500:intron 5.0%
!! AATAAAATTATGAATATTAT+AGG + chr2_4:6362706-6362725 None:intergenic 5.0%
TGTGATAGGCATGGAGGCTA+TGG - chr2_4:6361889-6361908 Msa0311500:CDS 50.0%
GCATGGAGGCTATGGAATGA+AGG - chr2_4:6361897-6361916 Msa0311500:intron 50.0%
! AAACCAGGGTGCTTTGGTTG+TGG + chr2_4:6362086-6362105 None:intergenic 50.0%
! AGGACAAAACCAGGGTGCTT+TGG + chr2_4:6362092-6362111 None:intergenic 50.0%
!!! AAGCACCCTGGTTTTGTCCT+TGG - chr2_4:6362092-6362111 Msa0311500:CDS 50.0%
!!! ACCCTGGTTTTGTCCTTGGA+AGG - chr2_4:6362096-6362115 Msa0311500:CDS 50.0%
AAGGGGACAACAAAACACGG+TGG - chr2_4:6362939-6362958 Msa0311500:intron 50.0%
GATCCTTATCTCGTGCCCTA+AGG - chr2_4:6363192-6363211 Msa0311500:intron 50.0%
CAGCAGCAGTTAACTGTCGT+TGG - chr2_4:6363455-6363474 Msa0311500:intron 50.0%
TGTGACTCAGCAAATGGGCA+CGG - chr2_4:6363994-6364013 Msa0311500:intron 50.0%
CCATGGTCTCAGATGAAGAG+GGG + chr2_4:6364035-6364054 None:intergenic 50.0%
AGTCATTGCCCACATCTCGA+GGG - chr2_4:6364313-6364332 Msa0311500:CDS 50.0%
! CAACTTTGGAAAATCCCGGC+AGG - chr2_4:6364391-6364410 Msa0311500:CDS 50.0%
!! GGTTCTGGAGATGTCGAGAT+TGG - chr2_4:6364415-6364434 Msa0311500:CDS 50.0%
! TGAACCATTGGTCTGGTAGC+TGG + chr2_4:6364569-6364588 None:intergenic 50.0%
GCAGATTCTGCAGCTGTGAA+TGG - chr2_4:6364659-6364678 Msa0311500:intron 50.0%
!! GGTGTTGGCTGAGAAGAAGA+AGG - chr2_4:6364787-6364806 Msa0311500:CDS 50.0%
! TTGCCACAACCAAAGCACCC+TGG - chr2_4:6362080-6362099 Msa0311500:CDS 55.0%
TGCCCTTAGGGCACGAGATA+AGG + chr2_4:6363198-6363217 None:intergenic 55.0%
GTGACTCAGCAAATGGGCAC+GGG - chr2_4:6363995-6364014 Msa0311500:intron 55.0%
TCAGCAAATGGGCACGGGAA+TGG - chr2_4:6364000-6364019 Msa0311500:intron 55.0%
! CCCCTCTTCATCTGAGACCA+TGG - chr2_4:6364032-6364051 Msa0311500:intron 55.0%
GATGTGGGCAATGACTGAGG+AGG + chr2_4:6364309-6364328 None:intergenic 55.0%
CGAGATGTGGGCAATGACTG+AGG + chr2_4:6364312-6364331 None:intergenic 55.0%
CAGTCATTGCCCACATCTCG+AGG - chr2_4:6364312-6364331 Msa0311500:CDS 55.0%
!! GGAAGCATCCCTCGAGATGT+GGG + chr2_4:6364324-6364343 None:intergenic 55.0%
!! TGGAAGCATCCCTCGAGATG+TGG + chr2_4:6364325-6364344 None:intergenic 55.0%
! CTTTGGAAAATCCCGGCAGG+AGG - chr2_4:6364394-6364413 Msa0311500:CDS 55.0%
AAAATCCCGGCAGGAGGTTC+TGG - chr2_4:6364400-6364419 Msa0311500:CDS 55.0%
ACATCTCCAGAACCTCCTGC+CGG + chr2_4:6364409-6364428 None:intergenic 55.0%
TGGTCCAGCTACCAGACCAA+TGG - chr2_4:6364562-6364581 Msa0311500:intron 55.0%
CATCTCCAGAACCTCCTGCC+GGG + chr2_4:6364408-6364427 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 6361553 6364877 6361553 ID=Msa0311500;Name=Msa0311500
chr2_4 mRNA 6361553 6364877 6361553 ID=Msa0311500-mRNA-1;Parent=Msa0311500;Name=Msa0311500-mRNA-1;_AED=0.75;_eAED=0.75;_QI=0|0|0|0.5|1|1|4|0|359
chr2_4 exon 6364737 6364877 6364737 ID=Msa0311500-mRNA-1:exon:2443;Parent=Msa0311500-mRNA-1
chr2_4 exon 6364232 6364533 6364232 ID=Msa0311500-mRNA-1:exon:2442;Parent=Msa0311500-mRNA-1
chr2_4 exon 6361990 6362266 6361990 ID=Msa0311500-mRNA-1:exon:2441;Parent=Msa0311500-mRNA-1
chr2_4 exon 6361553 6361912 6361553 ID=Msa0311500-mRNA-1:exon:2440;Parent=Msa0311500-mRNA-1
chr2_4 CDS 6364737 6364877 6364737 ID=Msa0311500-mRNA-1:cds;Parent=Msa0311500-mRNA-1
chr2_4 CDS 6364232 6364533 6364232 ID=Msa0311500-mRNA-1:cds;Parent=Msa0311500-mRNA-1
chr2_4 CDS 6361990 6362266 6361990 ID=Msa0311500-mRNA-1:cds;Parent=Msa0311500-mRNA-1
chr2_4 CDS 6361553 6361912 6361553 ID=Msa0311500-mRNA-1:cds;Parent=Msa0311500-mRNA-1
Gene Sequence

>Msa0311500

ATGTCTCCTGAATATGCAATGGGTGGATATTTTTCTGCGAAATCTGATGTTTTCAGTTTTGGAGTTCTCGTGCTAGAAATCATAAGTGGAATGAAGAATAGAGGATTTCATCAATCAGATGACCTAAATCTCCTTGGACATGCATGGAGGCTATGGAATGAAGGAAAGGCAATGGAACTAATAGATTCATCATATGCAGATTCATATTCAGAATCTGAAGTTATAAGATGCATACATGTTGGCCTAATATGTGTCCAAGAAAAAATAGAAGACAGACCTATAATGCCATCAGTGGTGATGATGTTGAATAGCGAAACATCGTCATTGCCACAACCAAAGCACCCTGGTTTTGTCCTTGGAAGGAATCCAGGTGAATCTGATTCATCTTCAGCTAAACAAGATGACACAATAAACGAAGTCACAGTTACAATAATAAATGGCAGATCGTCTTTTTCTCTTGCTTCATTTCATTGTTGTTCGTCCTCTTCCTTTCTTCCTCCAACACTGATTTCCTCAACATTGCAAATGTCTACTGATACCTCAACCAGAGACAGTTATGAAACATACTTCAATGGTGGCAAGTTTCCTCCTCAGTCATTGCCCACATCTCGAGGGATGCTTCCATTGTGTCGTTGTTTACCTCCAAAGCCGATGATTATTTACATATCAACAACTTTGGAAAATCCCGGCAGGAGGTTCTGGAGATGTCGAGATTGGCAAAAAAAAAACAAAACCTGTAATGAGTGGATTTGGGATGATGATCTTGGTCCAGCTACCAGACCAATGGTTCAGTGCTATTCAGCTGTTTCAAACTCAAGGGAAGCAGAGTCTGCTCCTTTGAATGCACATGTGAATCGTGAAGCAGATTCTGCAGCTGTGAATGGACCTGTGATTCGTGAATCTGAGTCTGCAAAGTGTGGAAAGTCTGCAAACCAATATTGCAACTGTGGTGAAATCTGGGAGAAGAAGAAAGACAAGTGGAAAATGAAGGTGTTGGCTGAGAAGAAGAAGGTTGAATGGCTTAAGTGGCTTATCATAGCTAGCTGGTTGATCTTTGCTGTTTTCTTTGTTAAGAAGTGA
Protein sequence

>Msa0311500

MSPEYAMGGYFSAKSDVFSFGVLVLEIISGMKNRGFHQSDDLNLLGHAWRLWNEGKAMELIDSSYADSYSESEVIRCIHVGLICVQEKIEDRPIMPSVVMMLNSETSSLPQPKHPGFVLGRNPGESDSSSAKQDDTINEVTVTIINGRSSFSLASFHCCSSSSFLPPTLISSTLQMSTDTSTRDSYETYFNGGKFPPQSLPTSRGMLPLCRCLPPKPMIIYISTTLENPGRRFWRCRDWQKKNKTCNEWIWDDDLGPATRPMVQCYSAVSNSREAESAPLNAHVNREADSAAVNGPVIRESESAKCGKSANQYCNCGEIWEKKKDKWKMKVLAEKKKVEWLKWLIIASWLIFAVFFVKK*