Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320000 | XP_003594803.1 | 94.366 | 923 | 32 | 1 | 1 | 903 | 1 | 923 | 0.0 | 1781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222560 | Msa0320000 | 0.800524 | 1.384102e-48 | -8.615850e-47 |
| Msa0242590 | Msa0320000 | 0.816203 | 6.242997e-52 | -8.615850e-47 |
| Msa0280790 | Msa0320000 | 0.822544 | 2.238390e-53 | -8.615850e-47 |
| Msa0301820 | Msa0320000 | 0.829987 | 3.783932e-55 | -8.615850e-47 |
| Msa0320000 | Msa0343010 | 0.823425 | 1.394552e-53 | -8.615850e-47 |
| Msa0320000 | Msa0367520 | 0.813345 | 2.682504e-51 | -8.615850e-47 |
| Msa0320000 | Msa0368860 | 0.817606 | 3.021583e-52 | -8.615850e-47 |
| Msa0320000 | Msa0377710 | 0.802532 | 5.364461e-49 | -8.615850e-47 |
| Msa0320000 | Msa0390970 | 0.816865 | 4.435626e-52 | -8.615850e-47 |
| Msa0320000 | Msa0462780 | 0.811541 | 6.650680e-51 | -8.615850e-47 |
| Msa0320000 | Msa0607800 | 0.806473 | 8.086230e-50 | -8.615850e-47 |
| Msa0320000 | Msa0688910 | 0.804060 | 2.589008e-49 | -8.615850e-47 |
| Msa0320000 | Msa0714790 | 0.831048 | 2.081386e-55 | -8.615850e-47 |
| Msa0320000 | Msa0743440 | 0.813593 | 2.366811e-51 | -8.615850e-47 |
| Msa0320000 | Msa0745720 | 0.801585 | 8.399102e-49 | -8.615850e-47 |
| Msa0320000 | Msa0756820 | 0.820782 | 5.716781e-53 | -8.615850e-47 |
| Msa0320000 | Msa0824450 | 0.807960 | 3.915489e-50 | -8.615850e-47 |
| Msa0320000 | Msa0836150 | 0.802570 | 5.268305e-49 | -8.615850e-47 |
| Msa0320000 | Msa0867110 | 0.801818 | 7.526056e-49 | -8.615850e-47 |
| Msa0320000 | Msa0981320 | 0.801085 | 1.063238e-48 | -8.615850e-47 |
| Msa0320000 | Msa1084530 | 0.803987 | 2.681960e-49 | -8.615850e-47 |
| Msa0320000 | Msa1125820 | 0.805768 | 1.138091e-49 | -8.615850e-47 |
| Msa0320000 | Msa1125990 | 0.802087 | 6.626126e-49 | -8.615850e-47 |
| Msa0320000 | Msa1127470 | 0.801769 | 7.699562e-49 | -8.615850e-47 |
| Msa0320000 | Msa1192570 | 0.804903 | 1.727854e-49 | -8.615850e-47 |
| Msa0320000 | Msa1301700 | 0.800973 | 1.120969e-48 | -8.615850e-47 |
| Msa0320000 | Msa1362130 | 0.801509 | 8.709179e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320000 | MtrunA17_Chr2g0294831 | 94.366 | 923 | 32 | 1 | 1 | 903 | 1 | 923 | 0.0 | 1781 |
| Msa0320000 | MtrunA17_Chr7g0271711 | 32.878 | 952 | 538 | 25 | 6 | 901 | 2 | 908 | 1.23e-117 | 380 |
| Msa0320000 | MtrunA17_Chr1g0192581 | 29.748 | 874 | 453 | 34 | 60 | 900 | 9 | 754 | 4.96e-71 | 250 |
| Msa0320000 | MtrunA17_Chr7g0250831 | 26.366 | 421 | 241 | 14 | 510 | 903 | 559 | 937 | 1.20e-18 | 91.7 |
| Msa0320000 | MtrunA17_Chr6g0457761 | 25.915 | 355 | 215 | 12 | 569 | 901 | 550 | 878 | 1.43e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320000 | AT3G58650.1 | 31.488 | 921 | 479 | 30 | 12 | 901 | 11 | 810 | 1.79e-98 | 327 |
| Msa0320000 | AT5G26910.3 | 30.937 | 918 | 515 | 29 | 6 | 901 | 5 | 825 | 1.04e-89 | 304 |
| Msa0320000 | AT5G26910.4 | 30.828 | 918 | 517 | 29 | 6 | 901 | 5 | 826 | 2.32e-89 | 303 |
| Msa0320000 | AT5G26910.1 | 30.828 | 918 | 517 | 29 | 6 | 901 | 5 | 826 | 2.32e-89 | 303 |
| Msa0320000 | AT3G05750.1 | 28.780 | 615 | 333 | 16 | 6 | 595 | 8 | 542 | 4.50e-45 | 175 |
| Msa0320000 | AT3G05750.1 | 38.994 | 159 | 91 | 2 | 744 | 901 | 645 | 798 | 4.65e-23 | 105 |
| Msa0320000 | AT3G05750.4 | 28.744 | 581 | 312 | 15 | 37 | 595 | 34 | 534 | 9.53e-45 | 174 |
| Msa0320000 | AT3G05750.4 | 38.994 | 159 | 91 | 2 | 744 | 901 | 637 | 790 | 3.70e-23 | 106 |
| Msa0320000 | AT5G26910.2 | 40.964 | 249 | 129 | 6 | 6 | 239 | 5 | 250 | 1.04e-39 | 157 |
| Msa0320000 | AT3G05750.3 | 28.324 | 519 | 272 | 14 | 97 | 595 | 1 | 439 | 1.72e-37 | 150 |
| Msa0320000 | AT3G05750.3 | 38.994 | 159 | 91 | 2 | 744 | 901 | 542 | 695 | 4.09e-23 | 105 |
| Msa0320000 | AT3G05750.2 | 28.324 | 519 | 272 | 14 | 97 | 595 | 1 | 439 | 1.72e-37 | 150 |
| Msa0320000 | AT3G05750.2 | 38.994 | 159 | 91 | 2 | 744 | 901 | 542 | 695 | 4.09e-23 | 105 |
| Msa0320000 | AT1G67040.1 | 31.466 | 232 | 123 | 12 | 12 | 222 | 28 | 244 | 2.43e-11 | 68.2 |
| Msa0320000 | AT1G67040.2 | 31.466 | 232 | 123 | 12 | 12 | 222 | 28 | 244 | 2.77e-11 | 68.2 |
Find 194 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGATCTTGCCGATTT+TGG | 0.126247 | 2_4:+20139147 | None:intergenic |
| CCTTCAACTTCTGTTCTAAA+AGG | 0.196616 | 2_4:+20137924 | None:intergenic |
| GATTCTCAGTTTCTATATTC+TGG | 0.225407 | 2_4:-20139276 | Msa0320000:CDS |
| ACAAAACCGGGATTCTTAAT+AGG | 0.234211 | 2_4:+20139099 | None:intergenic |
| TGATCAAATATTTAATTCTT+TGG | 0.234441 | 2_4:-20136655 | Msa0320000:CDS |
| TAATAGGGGACAAAAGTTTA+TGG | 0.239442 | 2_4:+20139115 | None:intergenic |
| GATTCTTCTTTGAATAATAA+AGG | 0.253439 | 2_4:-20138712 | Msa0320000:CDS |
| GAGGTTGATGCTTATGAATT+TGG | 0.255705 | 2_4:-20136690 | Msa0320000:CDS |
| CAATGTTGAGTTAATGTATA+TGG | 0.277411 | 2_4:-20137048 | Msa0320000:CDS |
| TTCATGGAAGTTGGATTATC+AGG | 0.282188 | 2_4:-20136527 | Msa0320000:three_prime_UTR |
| TAATGTAGTTGCAAGGCTTA+TGG | 0.290220 | 2_4:-20139373 | Msa0320000:CDS |
| TTATGTTTCAATGATGATTC+TGG | 0.299384 | 2_4:+20137752 | None:intergenic |
| CCAATTACATTGTATCCTAT+TGG | 0.304963 | 2_4:+20137965 | None:intergenic |
| CCAATAGGATACAATGTAAT+TGG | 0.307017 | 2_4:-20137965 | Msa0320000:CDS |
| CTCCCTTTCGGCTTTCTAAC+TGG | 0.309304 | 2_4:+20136976 | None:intergenic |
| GGATTGCTGCTCCTTGTTAA+TGG | 0.310716 | 2_4:+20138088 | None:intergenic |
| CAACAATCCTGCTTATATAA+TGG | 0.326959 | 2_4:-20139070 | Msa0320000:CDS |
| AATCCAACCACTTTCCATAT+TGG | 0.332576 | 2_4:+20136715 | None:intergenic |
| GTCCTATTGTTATTCATTCA+TGG | 0.342740 | 2_4:-20136543 | Msa0320000:three_prime_UTR |
| ACTACTGGAGATTCCTCTTA+TGG | 0.343118 | 2_4:-20138403 | Msa0320000:CDS |
| TGAGAACATTAGAAGAATTC+TGG | 0.343239 | 2_4:+20138521 | None:intergenic |
| AATGTAGTTGCAAGGCTTAT+GGG | 0.343622 | 2_4:-20139372 | Msa0320000:CDS |
| GTAGCAAGTAATAAACAATT+TGG | 0.345776 | 2_4:-20138169 | Msa0320000:CDS |
| TCTAAAGTTAACCTCAATCT+AGG | 0.348348 | 2_4:-20137863 | Msa0320000:CDS |
| CAAAACCGGGATTCTTAATA+GGG | 0.350999 | 2_4:+20139100 | None:intergenic |
| AAAAGTTTATGGTGTGTAAC+AGG | 0.355362 | 2_4:+20139126 | None:intergenic |
| TTTGCCTCCTTCCGGTTTCT+CGG | 0.358423 | 2_4:-20139340 | Msa0320000:CDS |
| GGGATCTTCTAGCAATTTCA+TGG | 0.358544 | 2_4:-20139232 | Msa0320000:CDS |
| TTAGATTCTTTGCCTCCTTC+CGG | 0.359642 | 2_4:-20139348 | Msa0320000:CDS |
| AGATCAAGATATGTCGTTTA+CGG | 0.368642 | 2_4:-20137825 | Msa0320000:CDS |
| CAATGATGATTCTGGAAGAT+TGG | 0.372954 | 2_4:+20137760 | None:intergenic |
| AAGGATATGAGTAGCCAATA+TGG | 0.377746 | 2_4:-20136729 | Msa0320000:CDS |
| TGTTATTCATTCATGGAAGT+TGG | 0.378429 | 2_4:-20136536 | Msa0320000:three_prime_UTR |
| GACCGGTGGCAGAAATTTGA+TGG | 0.381328 | 2_4:-20138626 | Msa0320000:CDS |
| ATAAGCCTTGCAACTACATT+AGG | 0.385722 | 2_4:+20139375 | None:intergenic |
| AGCAAAGGCTAAAGCGCATT+TGG | 0.386167 | 2_4:-20139010 | Msa0320000:CDS |
| TTAATTGATTCTATTATTGA+TGG | 0.386235 | 2_4:-20136398 | Msa0320000:three_prime_UTR |
| AATTTGCATAGGAAATCTTC+TGG | 0.387773 | 2_4:-20138544 | Msa0320000:CDS |
| AATGCGCTTTAGCCTTTGCT+TGG | 0.391802 | 2_4:+20139013 | None:intergenic |
| GGAGACTTAACAGATGTTTC+CGG | 0.393264 | 2_4:+20138751 | None:intergenic |
| CGCTCTTGAAACCTCCCTTT+CGG | 0.395032 | 2_4:+20136964 | None:intergenic |
| GAATGCTGTGAAGTGTTTAC+AGG | 0.396936 | 2_4:-20138806 | Msa0320000:CDS |
| AATTGATATTGCTACCAGAT+AGG | 0.404140 | 2_4:+20139576 | None:intergenic |
| GGCAATGAGACATCCCTATC+TGG | 0.407656 | 2_4:-20139590 | Msa0320000:intron |
| TTGGAAACCAATGGCTTAGA+TGG | 0.413451 | 2_4:+20138445 | None:intergenic |
| ATTCTTCTTTGAATAATAAA+GGG | 0.413579 | 2_4:-20138711 | Msa0320000:CDS |
| ATAGAAACTGAGAATCTTGA+AGG | 0.414969 | 2_4:+20139283 | None:intergenic |
| TGTCATTATTATCAATTGAA+TGG | 0.417904 | 2_4:+20138476 | None:intergenic |
| TAATTTCTTACGCGATTTCG+AGG | 0.425164 | 2_4:+20139778 | None:intergenic |
| AGAAGTATTGCCTCCAAAAT+CGG | 0.425187 | 2_4:-20139160 | Msa0320000:CDS |
| GTTAACTTTAGAAACATCAT+TGG | 0.426304 | 2_4:+20137874 | None:intergenic |
| GAAGGCTCAAGAACTGAGAT+TGG | 0.428155 | 2_4:+20137434 | None:intergenic |
| GCTTCTATGCCGTCCATAAG+AGG | 0.428885 | 2_4:+20138390 | None:intergenic |
| GACAATCTTTGAACAAAAGC+TGG | 0.430363 | 2_4:-20138783 | Msa0320000:CDS |
| GGATACAAAATGTGGACAAA+AGG | 0.432659 | 2_4:-20136855 | Msa0320000:CDS |
| CTTGCTACATTTGACTTCAC+TGG | 0.433596 | 2_4:+20138184 | None:intergenic |
| CATCATTGAAACATAAATCA+TGG | 0.434027 | 2_4:-20137745 | Msa0320000:CDS |
| ATTGTTGGATGGAACAAAAC+CGG | 0.440286 | 2_4:+20139086 | None:intergenic |
| ATGAAGACGAAAATGGTGTT+GGG | 0.440544 | 2_4:-20139470 | Msa0320000:CDS |
| GAAAGGGATGAGAGATTCAA+TGG | 0.441206 | 2_4:-20136769 | Msa0320000:CDS |
| TCTAGGAAAATTATTTGTCC+TGG | 0.441310 | 2_4:+20138279 | None:intergenic |
| ATTTGTCTTAGGTGGCTGAT+TGG | 0.442473 | 2_4:+20138576 | None:intergenic |
| CCGCAAGAATTCTTGAACCT+GGG | 0.445062 | 2_4:-20139041 | Msa0320000:CDS |
| AGAATTCTTCTAATGTTCTC+AGG | 0.451320 | 2_4:-20138519 | Msa0320000:CDS |
| AGATAACTCTGCATCGGATT+CGG | 0.451366 | 2_4:+20137193 | None:intergenic |
| TGATTGTGTGAGTGAATGTA+TGG | 0.451480 | 2_4:-20136907 | Msa0320000:CDS |
| GTTTCTATATTCTGGAAAGT+TGG | 0.452052 | 2_4:-20139268 | Msa0320000:CDS |
| CGCTTTAGCCTTTGCTTGGG+AGG | 0.453823 | 2_4:+20139017 | None:intergenic |
| TTCTGAGCATTTGTCTTAGG+TGG | 0.454477 | 2_4:+20138568 | None:intergenic |
| TTCCATGAATGAATAACAAT+AGG | 0.454572 | 2_4:+20136541 | None:intergenic |
| CAAGGTAGAAAAGTTACTAC+TGG | 0.456139 | 2_4:-20138418 | Msa0320000:CDS |
| GCCCATCAAATTTCTGCCAC+CGG | 0.457784 | 2_4:+20138624 | None:intergenic |
| CAGGTCGATGAAGACGAAAA+TGG | 0.458189 | 2_4:-20139477 | Msa0320000:CDS |
| TTCGCTATCGGTTACCTCCA+CGG | 0.460523 | 2_4:+20138318 | None:intergenic |
| CATGGAGTCAAAGCCTCAAA+AGG | 0.460709 | 2_4:-20139214 | Msa0320000:CDS |
| GTAATTGGCGGCGATGCCTT+AGG | 0.460790 | 2_4:-20137950 | Msa0320000:CDS |
| GACAATACAAGGTCTCCAAT+AGG | 0.471049 | 2_4:-20137980 | Msa0320000:CDS |
| ATGCGCTTTAGCCTTTGCTT+GGG | 0.471863 | 2_4:+20139014 | None:intergenic |
| TTGAGATGTAGAAGTTATGT+TGG | 0.471928 | 2_4:-20136882 | Msa0320000:CDS |
| TGGAAAGTGGTTGGATTATG+AGG | 0.473906 | 2_4:-20136709 | Msa0320000:CDS |
| AAATGGTGAAAAGAAAAGAT+TGG | 0.475344 | 2_4:-20136827 | Msa0320000:CDS |
| CCATTTAATAATGTTTCAAA+CGG | 0.475409 | 2_4:-20140884 | None:intergenic |
| TCAAGAACTGAGATTGGACT+TGG | 0.479255 | 2_4:+20137440 | None:intergenic |
| GCCGCAAGAATTCTTGAACC+TGG | 0.480122 | 2_4:-20139042 | Msa0320000:CDS |
| CATTATATAAGCAGGATTGT+TGG | 0.482949 | 2_4:+20139071 | None:intergenic |
| CATCATCGACGGTCTCACTA+AGG | 0.485114 | 2_4:-20138987 | Msa0320000:CDS |
| ACTGAAGATGACGCAATAAG+AGG | 0.485623 | 2_4:+20138922 | None:intergenic |
| CAAAAGTGAATGTTCAAAGA+AGG | 0.486529 | 2_4:-20138663 | Msa0320000:CDS |
| CGAGTAGGGATCCGAGAAAC+CGG | 0.493083 | 2_4:+20139329 | None:intergenic |
| TTAACAAGGAGCAGCAATCC+TGG | 0.493405 | 2_4:-20138085 | Msa0320000:CDS |
| CTGAGATTGGACTTGGTTGT+CGG | 0.498616 | 2_4:+20137447 | None:intergenic |
| TTGTCCCCTATTAAGAATCC+CGG | 0.498971 | 2_4:-20139105 | Msa0320000:CDS |
| TTTAGAAACATCATTGGAAG+AGG | 0.499066 | 2_4:+20137880 | None:intergenic |
| GATACAAAATGTGGACAAAA+GGG | 0.500320 | 2_4:-20136854 | Msa0320000:CDS |
| ATCAGTGCCATCTAAGCCAT+TGG | 0.504627 | 2_4:-20138452 | Msa0320000:CDS |
| GAATACTAATGATCTTTCGT+TGG | 0.507943 | 2_4:-20138035 | Msa0320000:CDS |
| ATTGATATTGCTACCAGATA+GGG | 0.509200 | 2_4:+20139577 | None:intergenic |
| TCTCATTGCCACATTGTGGT+TGG | 0.512196 | 2_4:+20139603 | None:intergenic |
| GGTGAAAAGAAAAGATTGGT+TGG | 0.512637 | 2_4:-20136823 | Msa0320000:CDS |
| AGATGTAGAAGTTATGTTGG+TGG | 0.518076 | 2_4:-20136879 | Msa0320000:CDS |
| CAGCTTTCAACCGAAAATGA+AGG | 0.520086 | 2_4:+20137416 | None:intergenic |
| GGTCAAAGATCTTAGAGATA+AGG | 0.520702 | 2_4:-20138965 | Msa0320000:CDS |
| GGTGTTGGGGAATATGTTAG+AGG | 0.527966 | 2_4:-20139456 | Msa0320000:CDS |
| TTCCCTCGGCCGATCTCGTG+AGG | 0.528378 | 2_4:-20137021 | Msa0320000:CDS |
| ACGATGAATCAAGGATAGAA+AGG | 0.528440 | 2_4:-20136941 | Msa0320000:CDS |
| AAAGGTCTACAGACAAGGAC+TGG | 0.530185 | 2_4:-20138252 | Msa0320000:CDS |
| TGTCGAGGTGTCACAGAACC+AGG | 0.530364 | 2_4:+20138067 | None:intergenic |
| AGGGAAGGTTTGAGTTCGAC+CGG | 0.531361 | 2_4:-20138643 | Msa0320000:CDS |
| CAACCTCACGAGATCGGCCG+AGG | 0.531828 | 2_4:+20137018 | None:intergenic |
| GTGGACAAAAGGGTTTGAAA+TGG | 0.534070 | 2_4:-20136844 | Msa0320000:CDS |
| GCCTTTGCTTGGGAGGACCC+AGG | 0.534090 | 2_4:+20139024 | None:intergenic |
| AACTCTGCATCGGATTCGGT+TGG | 0.534201 | 2_4:+20137197 | None:intergenic |
| CAGCTTCTTCAACATCAACT+AGG | 0.535267 | 2_4:-20137166 | Msa0320000:CDS |
| TCTTTGAACAAAAGCTGGAA+TGG | 0.535359 | 2_4:-20138778 | Msa0320000:CDS |
| TGTAGAAGTTATGTTGGTGG+AGG | 0.536172 | 2_4:-20136876 | Msa0320000:CDS |
| CAAAAGCTGGAATGGAGCAC+CGG | 0.536269 | 2_4:-20138770 | Msa0320000:CDS |
| GCAGCCTCCATTATATAAGC+AGG | 0.537047 | 2_4:+20139063 | None:intergenic |
| GATGAAGACGAAAATGGTGT+TGG | 0.540397 | 2_4:-20139471 | Msa0320000:CDS |
| AGCGCATTTGGCATCATCGA+CGG | 0.545183 | 2_4:-20138998 | Msa0320000:CDS |
| TCTGTTGCAATCCTAGATTG+AGG | 0.548612 | 2_4:+20137852 | None:intergenic |
| GTGAATGTTCAAAGAAGGGA+AGG | 0.551174 | 2_4:-20138658 | Msa0320000:CDS |
| AAAAGTGAATGTTCAAAGAA+GGG | 0.552284 | 2_4:-20138662 | Msa0320000:CDS |
| TTGTTGGATGGAACAAAACC+GGG | 0.552886 | 2_4:+20139087 | None:intergenic |
| ATCATTGAAACATAAATCAT+GGG | 0.554865 | 2_4:-20137744 | Msa0320000:intron |
| TCAAGAGCGACGATGAATCA+AGG | 0.555470 | 2_4:-20136950 | Msa0320000:CDS |
| GCAAGTAATAAACAATTTGG+TGG | 0.555856 | 2_4:-20138166 | Msa0320000:CDS |
| CTTACGTTGAAAGAATGAGA+TGG | 0.555978 | 2_4:+20140676 | None:intergenic |
| TTGGTAGATCATCAACTACA+TGG | 0.558692 | 2_4:-20137100 | Msa0320000:CDS |
| TTCAATGGTTGATGAACTTG+TGG | 0.559186 | 2_4:-20136754 | Msa0320000:CDS |
| ATTCAATCTCAAGAAATCCA+TGG | 0.560466 | 2_4:-20137245 | Msa0320000:CDS |
| CAAAGATCTTAGAGATAAGG+TGG | 0.565852 | 2_4:-20138962 | Msa0320000:CDS |
| AACCAGTTAGAAAGCCGAAA+GGG | 0.567053 | 2_4:-20136978 | Msa0320000:CDS |
| GCATCCAAGTCAGATTTACC+AGG | 0.572115 | 2_4:-20139752 | Msa0320000:intron |
| TGTACCTGGTAAATCTGACT+TGG | 0.572485 | 2_4:+20139748 | None:intergenic |
| ACCGGTGGCAGAAATTTGAT+GGG | 0.573900 | 2_4:-20138625 | Msa0320000:CDS |
| TAGCCAATATGGAAAGTGGT+TGG | 0.575562 | 2_4:-20136718 | Msa0320000:CDS |
| CCCAGGTTCAAGAATTCTTG+CGG | 0.576295 | 2_4:+20139041 | None:intergenic |
| AAGGTGGACTCTTCGCAGAA+AGG | 0.576510 | 2_4:-20138946 | Msa0320000:CDS |
| CAAGTAATAAACAATTTGGT+GGG | 0.577594 | 2_4:-20138165 | Msa0320000:CDS |
| AGTTCACAACCTCACGAGAT+CGG | 0.579261 | 2_4:+20137012 | None:intergenic |
| ATATAAGCAGGATTGTTGGA+TGG | 0.580763 | 2_4:+20139075 | None:intergenic |
| TGCTTGATACAGACAATACA+AGG | 0.581399 | 2_4:-20137991 | Msa0320000:CDS |
| TCCATTGCAAAATCTAAAGT+CGG | 0.581445 | 2_4:-20138355 | Msa0320000:CDS |
| TGAGTAGCCAATATGGAAAG+TGG | 0.584195 | 2_4:-20136722 | Msa0320000:CDS |
| ATAGGATACAATGTAATTGG+CGG | 0.584996 | 2_4:-20137962 | Msa0320000:CDS |
| TTACGTTGAAAGAATGAGAT+GGG | 0.589537 | 2_4:+20140677 | None:intergenic |
| ATGTTTGCAGGGTGATGAGA+TGG | 0.589624 | 2_4:-20137489 | Msa0320000:intron |
| GAATCTTCTTCTGCGTGTGT+AGG | 0.589839 | 2_4:+20138730 | None:intergenic |
| GTTGGCAAAAGATGTGTACA+AGG | 0.591952 | 2_4:-20136805 | Msa0320000:CDS |
| ACCTGGGTCCTCCCAAGCAA+AGG | 0.594584 | 2_4:-20139025 | Msa0320000:CDS |
| ATCATCGACGGTCTCACTAA+GGG | 0.595032 | 2_4:-20138986 | Msa0320000:CDS |
| CCATTGGTTTCCAACTCGCA+AGG | 0.595241 | 2_4:-20138436 | Msa0320000:CDS |
| CAATCCTGCTTATATAATGG+AGG | 0.595285 | 2_4:-20139067 | Msa0320000:CDS |
| TCGAGGTCCAATCAAACAAG+TGG | 0.595809 | 2_4:+20139795 | None:intergenic |
| TGAGTCAGATAACTCTGCAT+CGG | 0.597249 | 2_4:+20137187 | None:intergenic |
| GTATTCTTTCCACCTTGTCG+AGG | 0.598057 | 2_4:+20138052 | None:intergenic |
| GCGGATGTTATCAGTACAGA+AGG | 0.607854 | 2_4:-20137377 | Msa0320000:intron |
| CATTCACTACACCATTAACA+AGG | 0.608076 | 2_4:-20138099 | Msa0320000:CDS |
| CTGTTCTAAAAGGATACCTA+AGG | 0.611780 | 2_4:+20137934 | None:intergenic |
| TCTCATCAGAATCTACTCAA+AGG | 0.615246 | 2_4:-20138840 | Msa0320000:CDS |
| CCTTGCGAGTTGGAAACCAA+TGG | 0.620891 | 2_4:+20138436 | None:intergenic |
| ACTATGATAAAGAAGCAGAC+AGG | 0.622027 | 2_4:-20137143 | Msa0320000:CDS |
| TAGAAACTGAGAATCTTGAA+GGG | 0.623762 | 2_4:+20139284 | None:intergenic |
| GGACGGCATAGAAGCTCTAG+TGG | 0.624669 | 2_4:-20138382 | Msa0320000:CDS |
| GGTTCTGTGACACCTCGACA+AGG | 0.624691 | 2_4:-20138064 | Msa0320000:CDS |
| CAGTTAGAAAGCCGAAAGGG+AGG | 0.631260 | 2_4:-20136975 | Msa0320000:CDS |
| AATTTCTCAAAGAAGAAGCA+AGG | 0.634224 | 2_4:-20138863 | Msa0320000:CDS |
| ACACTTCACAGCATTCGACT+CGG | 0.634714 | 2_4:+20138813 | None:intergenic |
| CTGGAGATTCCTCTTATGGA+CGG | 0.637212 | 2_4:-20138399 | Msa0320000:CDS |
| TAGGGATCCGAGAAACCGGA+AGG | 0.638892 | 2_4:+20139333 | None:intergenic |
| GACAGTTTAAACAGTAGCTG+TGG | 0.639820 | 2_4:-20137803 | Msa0320000:CDS |
| GAGCTCCTAATGTAGTTGCA+AGG | 0.641567 | 2_4:-20139380 | Msa0320000:CDS |
| CAACCAGTTAGAAAGCCGAA+AGG | 0.642923 | 2_4:-20136979 | Msa0320000:CDS |
| AAAGAAAAGGTCTACAGACA+AGG | 0.643351 | 2_4:-20138257 | Msa0320000:CDS |
| AATGCTGTGAAGTGTTTACA+GGG | 0.647568 | 2_4:-20138805 | Msa0320000:CDS |
| TGAAGACGAAAATGGTGTTG+GGG | 0.648206 | 2_4:-20139469 | Msa0320000:CDS |
| GATGTCTCATTGCCACATTG+TGG | 0.650908 | 2_4:+20139599 | None:intergenic |
| TGGTAGATCATCAACTACAT+GGG | 0.652706 | 2_4:-20137099 | Msa0320000:CDS |
| CTGTGAATCCTCGATGAGCG+CGG | 0.653212 | 2_4:-20137396 | Msa0320000:CDS |
| GGTTGATGAACTTGTGGACA+AGG | 0.654507 | 2_4:-20136748 | Msa0320000:CDS |
| GAAGGTTTGAGTTCGACCGG+TGG | 0.655900 | 2_4:-20138640 | Msa0320000:CDS |
| GATAACATCCGCGCTCATCG+AGG | 0.659096 | 2_4:+20137388 | None:intergenic |
| AAAATGAAATTCTATACACC+AGG | 0.659647 | 2_4:-20138297 | Msa0320000:CDS |
| TGATTCTGGAAGATTGGTGA+AGG | 0.660187 | 2_4:+20137766 | None:intergenic |
| AACCTCACGAGATCGGCCGA+GGG | 0.665374 | 2_4:+20137019 | None:intergenic |
| TGTCGGCAATTGAATGACAG+AGG | 0.665750 | 2_4:+20137464 | None:intergenic |
| AAGTTGAAGGAATTGACAAG+TGG | 0.673114 | 2_4:-20137911 | Msa0320000:CDS |
| AAGAAAATCCAACCACAATG+TGG | 0.674603 | 2_4:-20139611 | Msa0320000:CDS |
| GGATCCGAGAAACCGGAAGG+AGG | 0.677160 | 2_4:+20139336 | None:intergenic |
| AAAACCGGGATTCTTAATAG+GGG | 0.690424 | 2_4:+20139101 | None:intergenic |
| TTGGTGGAGGATACAAAATG+TGG | 0.699477 | 2_4:-20136863 | Msa0320000:CDS |
| TAATGGTGTAGTGAATGTGA+AGG | 0.701874 | 2_4:+20138105 | None:intergenic |
| TCTGTGACACCTCGACAAGG+TGG | 0.703671 | 2_4:-20138061 | Msa0320000:CDS |
| TCTGTTACAAGTGATGACTG+TGG | 0.759389 | 2_4:-20139408 | Msa0320000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTTCTAAAATTTC+AGG | - | chr2_4:20137269-20137288 | Msa0320000:intron | 10.0% |
| !!! | TTTTCTTAATTTCCTTTAAT+GGG | - | chr2_4:20136641-20136660 | Msa0320000:CDS | 15.0% |
| !!! | TTTTCAATTTTTCACTTTAT+TGG | - | chr2_4:20136698-20136717 | Msa0320000:CDS | 15.0% |
| !!! | TTATTTTTAGTCTTTTGATT+CGG | - | chr2_4:20136743-20136762 | Msa0320000:CDS | 15.0% |
| !! | TTCAGCTTAAATTTATATTA+TGG | - | chr2_4:20136906-20136925 | Msa0320000:CDS | 15.0% |
| !!! | TTAATTTCATCTTTTGTTAT+TGG | - | chr2_4:20137584-20137603 | Msa0320000:intron | 15.0% |
| !! | ATTCTTCTTTGAATAATAAA+GGG | - | chr2_4:20138555-20138574 | Msa0320000:CDS | 15.0% |
| !! | AGATAATAATCACTTAAATA+TGG | + | chr2_4:20139563-20139582 | None:intergenic | 15.0% |
| !!! | AGTGATTATTCAATAATTTT+TGG | + | chr2_4:20139693-20139712 | None:intergenic | 15.0% |
| !!! | ATAATCACTCTTTTATTAAT+TGG | - | chr2_4:20139704-20139723 | Msa0320000:intron | 15.0% |
| !!! | TTTTTACTGTATATATTTTC+AGG | - | chr2_4:20139979-20139998 | Msa0320000:intron | 15.0% |
| !! | TGATCAAATATTTAATTCTT+TGG | - | chr2_4:20140611-20140630 | Msa0320000:intron | 15.0% |
| !!! | TTAATTGATTCTATTATTGA+TGG | - | chr2_4:20140868-20140887 | Msa0320000:five_prime_UTR | 15.0% |
| !!! | TTTCTTTTTTCTCTTCAAAT+TGG | - | chr2_4:20136447-20136466 | Msa0320000:three_prime_UTR | 20.0% |
| !!! | CTTTTCTTAATTTCCTTTAA+TGG | - | chr2_4:20136640-20136659 | Msa0320000:CDS | 20.0% |
| !! | ATTCTTCAAAATTCAAACAA+AGG | + | chr2_4:20136831-20136850 | None:intergenic | 20.0% |
| !!! | AACATTGTATTTTACTCATT+AGG | - | chr2_4:20136852-20136871 | Msa0320000:CDS | 20.0% |
| !! | AATATGAGATTGTATTTACT+AGG | - | chr2_4:20137031-20137050 | Msa0320000:CDS | 20.0% |
| !! | AGAATAATCATAATTAACCA+AGG | + | chr2_4:20137224-20137243 | None:intergenic | 20.0% |
| !! | TATAGCAATATCAAATCAAA+GGG | + | chr2_4:20137251-20137270 | None:intergenic | 20.0% |
| !! | ATATAGCAATATCAAATCAA+AGG | + | chr2_4:20137252-20137271 | None:intergenic | 20.0% |
| !!! | AATTTTCTAAAATTTCAGGT+AGG | - | chr2_4:20137273-20137292 | Msa0320000:intron | 20.0% |
| !!! | CTCATTTGAAATTTAATAAC+TGG | + | chr2_4:20137327-20137346 | None:intergenic | 20.0% |
| !!! | ATCTTTTGTTATTGGTAAAT+TGG | - | chr2_4:20137592-20137611 | Msa0320000:intron | 20.0% |
| !! | TACAAAAAATTATGTACAAC+AGG | + | chr2_4:20137734-20137753 | None:intergenic | 20.0% |
| !!! | ATTACATGTTTAATTTTTCC+AGG | - | chr2_4:20137770-20137789 | Msa0320000:CDS | 20.0% |
| !! | GATTCTTCTTTGAATAATAA+AGG | - | chr2_4:20138554-20138573 | Msa0320000:CDS | 20.0% |
| !! | TGTCATTATTATCAATTGAA+TGG | + | chr2_4:20138793-20138812 | None:intergenic | 20.0% |
| !!! | ATAATTTTCCTAGAAAGAAA+AGG | - | chr2_4:20138996-20139015 | Msa0320000:CDS | 20.0% |
| !! | ATCATTGAAACATAAATCAT+GGG | - | chr2_4:20139522-20139541 | Msa0320000:intron | 20.0% |
| !! | AAAACCATAAACAAAAAGTT+AGG | - | chr2_4:20139630-20139649 | Msa0320000:CDS | 20.0% |
| !!! | TCAAAAAGTATAAATTTAGC+AGG | + | chr2_4:20139656-20139675 | None:intergenic | 20.0% |
| !!! | GCTAAATTTATACTTTTTGA+TGG | - | chr2_4:20139656-20139675 | Msa0320000:intron | 20.0% |
| ! | CAAGACAAAAACTTAAGTTA+AGG | + | chr2_4:20136483-20136502 | None:intergenic | 25.0% |
| ! | ATTGAAAACGAAATCTGAAA+AGG | + | chr2_4:20136686-20136705 | None:intergenic | 25.0% |
| ! | TAACACAAATGATAACAATG+TGG | + | chr2_4:20136726-20136745 | None:intergenic | 25.0% |
| !!! | GAAATTTCTGTGTTTTTTGT+TGG | - | chr2_4:20136768-20136787 | Msa0320000:CDS | 25.0% |
| !!! | TTGATATGAAGTGGATTTTA+AGG | - | chr2_4:20137105-20137124 | Msa0320000:CDS | 25.0% |
| !! | TTTCAGAGATGTTGAAATTT+TGG | - | chr2_4:20137173-20137192 | Msa0320000:CDS | 25.0% |
| ! | TCTATCTTGATTCATCTTTA+AGG | - | chr2_4:20137381-20137400 | Msa0320000:CDS | 25.0% |
| ! | TGAACATATACAATTGACAA+GGG | + | chr2_4:20137563-20137582 | None:intergenic | 25.0% |
| !!! | TCTCTTTGAAACTTTTCAAT+TGG | + | chr2_4:20138089-20138108 | None:intergenic | 25.0% |
| ! | AAAAGTGAATGTTCAAAGAA+GGG | - | chr2_4:20138604-20138623 | Msa0320000:CDS | 25.0% |
| !! | TAGAATTTCATTTTCGCTAT+CGG | + | chr2_4:20138963-20138982 | None:intergenic | 25.0% |
| ! | AAAATGAAATTCTATACACC+AGG | - | chr2_4:20138969-20138988 | Msa0320000:CDS | 25.0% |
| ! | GTAGCAAGTAATAAACAATT+TGG | - | chr2_4:20139097-20139116 | Msa0320000:CDS | 25.0% |
| ! | CAAGTAATAAACAATTTGGT+GGG | - | chr2_4:20139101-20139120 | Msa0320000:CDS | 25.0% |
| !! | GTTAACTTTAGAAACATCAT+TGG | + | chr2_4:20139395-20139414 | None:intergenic | 25.0% |
| ! | TTATGTTTCAATGATGATTC+TGG | + | chr2_4:20139517-20139536 | None:intergenic | 25.0% |
| ! | CATCATTGAAACATAAATCA+TGG | - | chr2_4:20139521-20139540 | Msa0320000:intron | 25.0% |
| ! | GTATAATGTCATCAGTTTAA+TGG | - | chr2_4:20139605-20139624 | Msa0320000:CDS | 25.0% |
| !! | ATCACTCTTTTATTAATTGG+TGG | - | chr2_4:20139707-20139726 | Msa0320000:intron | 25.0% |
| ! | TGAGTTAATGACTTACTTAA+TGG | + | chr2_4:20139754-20139773 | None:intergenic | 25.0% |
| ! | CTTAAAAAGTTACTGTTGTT+TGG | - | chr2_4:20139921-20139940 | Msa0320000:intron | 25.0% |
| ! | TTAATTTAATGACACATGAG+TGG | - | chr2_4:20139951-20139970 | Msa0320000:intron | 25.0% |
| !!! | TCCATGGATTTAATTTTTCA+AGG | - | chr2_4:20140037-20140056 | Msa0320000:intron | 25.0% |
| ! | TCCTTGAAAAATTAAATCCA+TGG | + | chr2_4:20140041-20140060 | None:intergenic | 25.0% |
| !! | ACATTTTCTATGATGAAGTT+TGG | - | chr2_4:20140147-20140166 | Msa0320000:intron | 25.0% |
| ! | CAATGTTGAGTTAATGTATA+TGG | - | chr2_4:20140218-20140237 | Msa0320000:intron | 25.0% |
| ! | AAATGGTGAAAAGAAAAGAT+TGG | - | chr2_4:20140439-20140458 | Msa0320000:intron | 25.0% |
| !!! | AAGGAAATTTTGAGTTTGAA+AGG | - | chr2_4:20140480-20140499 | Msa0320000:intron | 25.0% |
| !!! | AGGAAATTTTGAGTTTGAAA+GGG | - | chr2_4:20140481-20140500 | Msa0320000:intron | 25.0% |
| ! | TTCCATGAATGAATAACAAT+AGG | + | chr2_4:20140728-20140747 | None:intergenic | 25.0% |
| !!! | TTTAAAAATTTTGCTGCTTC+TGG | - | chr2_4:20140802-20140821 | Msa0320000:five_prime_UTR | 25.0% |
| TTACGTTGAAAGAATGAGAT+GGG | + | chr2_4:20136592-20136611 | None:intergenic | 30.0% | |
| AAAAGGAAAGAACCCATTAA+AGG | + | chr2_4:20136656-20136675 | None:intergenic | 30.0% | |
| !!! | TTTAATGGGTTCTTTCCTTT+TGG | - | chr2_4:20136655-20136674 | Msa0320000:CDS | 30.0% |
| GTACATGATTAGTGAATTAG+AGG | - | chr2_4:20136943-20136962 | Msa0320000:CDS | 30.0% | |
| ! | TTGAGAATTTGCCATTGATT+TGG | - | chr2_4:20136968-20136987 | Msa0320000:CDS | 30.0% |
| CCATATACATTCCAAATCAA+TGG | + | chr2_4:20136982-20137001 | None:intergenic | 30.0% | |
| !! | CCATTGATTTGGAATGTATA+TGG | - | chr2_4:20136979-20136998 | Msa0320000:CDS | 30.0% |
| ! | TGATTTGGAATGTATATGGT+TGG | - | chr2_4:20136983-20137002 | Msa0320000:CDS | 30.0% |
| TTGAGTTTGACTATGTTATC+TGG | - | chr2_4:20137059-20137078 | Msa0320000:CDS | 30.0% | |
| !!! | GGAGATTTTTTGATATGAAG+TGG | - | chr2_4:20137096-20137115 | Msa0320000:CDS | 30.0% |
| !! | ATATGAAGTGGATTTTAAGG+TGG | - | chr2_4:20137108-20137127 | Msa0320000:CDS | 30.0% |
| GAAAAAGAAGGGACTAAAAA+TGG | - | chr2_4:20137436-20137455 | Msa0320000:CDS | 30.0% | |
| !!! | GTTTTTTCCACTTGTTTGAT+TGG | - | chr2_4:20137464-20137483 | Msa0320000:CDS | 30.0% |
| CTGAACATATACAATTGACA+AGG | + | chr2_4:20137564-20137583 | None:intergenic | 30.0% | |
| ATTGATATTGCTACCAGATA+GGG | + | chr2_4:20137692-20137711 | None:intergenic | 30.0% | |
| AATTGATATTGCTACCAGAT+AGG | + | chr2_4:20137693-20137712 | None:intergenic | 30.0% | |
| AGGGATCTTGTATCAAAAAA+CGG | + | chr2_4:20137966-20137985 | None:intergenic | 30.0% | |
| TAGAAACTGAGAATCTTGAA+GGG | + | chr2_4:20137985-20138004 | None:intergenic | 30.0% | |
| ATAGAAACTGAGAATCTTGA+AGG | + | chr2_4:20137986-20138005 | None:intergenic | 30.0% | |
| GATTCTCAGTTTCTATATTC+TGG | - | chr2_4:20137990-20138009 | Msa0320000:CDS | 30.0% | |
| ! | GTTTCTATATTCTGGAAAGT+TGG | - | chr2_4:20137998-20138017 | Msa0320000:CDS | 30.0% |
| ! | AAAGTTGGTTGAAAAAGTTG+AGG | - | chr2_4:20138013-20138032 | Msa0320000:CDS | 30.0% |
| ! | AAGTTGGTTGAAAAAGTTGA+GGG | - | chr2_4:20138014-20138033 | Msa0320000:CDS | 30.0% |
| AAAAGTTTATGGTGTGTAAC+AGG | + | chr2_4:20138143-20138162 | None:intergenic | 30.0% | |
| TAATAGGGGACAAAAGTTTA+TGG | + | chr2_4:20138154-20138173 | None:intergenic | 30.0% | |
| CATTATATAAGCAGGATTGT+TGG | + | chr2_4:20138198-20138217 | None:intergenic | 30.0% | |
| CAACAATCCTGCTTATATAA+TGG | - | chr2_4:20138196-20138215 | Msa0320000:CDS | 30.0% | |
| AATTTCTCAAAGAAGAAGCA+AGG | - | chr2_4:20138403-20138422 | Msa0320000:CDS | 30.0% | |
| !! | TTTGAACATTCACTTTTGCT+TGG | + | chr2_4:20138601-20138620 | None:intergenic | 30.0% |
| CAAAAGTGAATGTTCAAAGA+AGG | - | chr2_4:20138603-20138622 | Msa0320000:CDS | 30.0% | |
| ! | TTTTTCTGAGCATTTGTCTT+AGG | + | chr2_4:20138704-20138723 | None:intergenic | 30.0% |
| ATGCTCAGAAAAATTTGCAT+AGG | - | chr2_4:20138711-20138730 | Msa0320000:CDS | 30.0% | |
| AATTTGCATAGGAAATCTTC+TGG | - | chr2_4:20138722-20138741 | Msa0320000:CDS | 30.0% | |
| TGAGAACATTAGAAGAATTC+TGG | + | chr2_4:20138748-20138767 | None:intergenic | 30.0% | |
| AGAATTCTTCTAATGTTCTC+AGG | - | chr2_4:20138747-20138766 | Msa0320000:CDS | 30.0% | |
| ! | TCCATTGCAAAATCTAAAGT+CGG | - | chr2_4:20138911-20138930 | Msa0320000:CDS | 30.0% |
| TCTAGGAAAATTATTTGTCC+TGG | + | chr2_4:20138990-20139009 | None:intergenic | 30.0% | |
| GCAAGTAATAAACAATTTGG+TGG | - | chr2_4:20139100-20139119 | Msa0320000:CDS | 30.0% | |
| GAATACTAATGATCTTTCGT+TGG | - | chr2_4:20139231-20139250 | Msa0320000:CDS | 30.0% | |
| CCAATTACATTGTATCCTAT+TGG | + | chr2_4:20139304-20139323 | None:intergenic | 30.0% | |
| CCAATAGGATACAATGTAAT+TGG | - | chr2_4:20139301-20139320 | Msa0320000:CDS | 30.0% | |
| ATAGGATACAATGTAATTGG+CGG | - | chr2_4:20139304-20139323 | Msa0320000:CDS | 30.0% | |
| TTTAGAAACATCATTGGAAG+AGG | + | chr2_4:20139389-20139408 | None:intergenic | 30.0% | |
| ! | TCTAAAGTTAACCTCAATCT+AGG | - | chr2_4:20139403-20139422 | Msa0320000:CDS | 30.0% |
| ! | AGATCAAGATATGTCGTTTA+CGG | - | chr2_4:20139441-20139460 | Msa0320000:CDS | 30.0% |
| ATTAACTCAAAGATGTTTGC+AGG | - | chr2_4:20139765-20139784 | Msa0320000:CDS | 30.0% | |
| TTAACTCAAAGATGTTTGCA+GGG | - | chr2_4:20139766-20139785 | Msa0320000:CDS | 30.0% | |
| ATTCAATCTCAAGAAATCCA+TGG | - | chr2_4:20140021-20140040 | Msa0320000:intron | 30.0% | |
| ! | ATGTATATGGATTTTTCCCT+CGG | - | chr2_4:20140231-20140250 | Msa0320000:intron | 30.0% |
| TTGAGATGTAGAAGTTATGT+TGG | - | chr2_4:20140384-20140403 | Msa0320000:intron | 30.0% | |
| GATACAAAATGTGGACAAAA+GGG | - | chr2_4:20140412-20140431 | Msa0320000:intron | 30.0% | |
| ! | GTCCTATTGTTATTCATTCA+TGG | - | chr2_4:20140723-20140742 | Msa0320000:five_prime_UTR | 30.0% |
| TGTTATTCATTCATGGAAGT+TGG | - | chr2_4:20140730-20140749 | Msa0320000:five_prime_UTR | 30.0% | |
| CTTACGTTGAAAGAATGAGA+TGG | + | chr2_4:20136593-20136612 | None:intergenic | 35.0% | |
| TCTGAAAAGGAAGAACCAAA+AGG | + | chr2_4:20136673-20136692 | None:intergenic | 35.0% | |
| ! | TATCTGGTTCATTCTCTCAA+AGG | - | chr2_4:20137075-20137094 | Msa0320000:CDS | 35.0% |
| !!! | TGGATTTTAAGGTGGATCTT+AGG | - | chr2_4:20137116-20137135 | Msa0320000:CDS | 35.0% |
| ! | TTTAAGGTGGATCTTAGGTT+TGG | - | chr2_4:20137121-20137140 | Msa0320000:CDS | 35.0% |
| GCGTAGATTGCATCAATTTA+TGG | - | chr2_4:20137195-20137214 | Msa0320000:CDS | 35.0% | |
| !! | TGAGTTCTGCTTTTGAAGAT+GGG | - | chr2_4:20137409-20137428 | Msa0320000:CDS | 35.0% |
| AAGATGGGAGTTGAAAAAGA+AGG | - | chr2_4:20137424-20137443 | Msa0320000:CDS | 35.0% | |
| AGATGGGAGTTGAAAAAGAA+GGG | - | chr2_4:20137425-20137444 | Msa0320000:CDS | 35.0% | |
| AAAGAAGGGACTAAAAATGG+AGG | - | chr2_4:20137439-20137458 | Msa0320000:CDS | 35.0% | |
| TAATTTCTTACGCGATTTCG+AGG | + | chr2_4:20137491-20137510 | None:intergenic | 35.0% | |
| AAAACACTATTGCTTGTACC+TGG | + | chr2_4:20137535-20137554 | None:intergenic | 35.0% | |
| AAGAAAATCCAACCACAATG+TGG | - | chr2_4:20137655-20137674 | Msa0320000:intron | 35.0% | |
| ATGAAGACGAAAATGGTGTT+GGG | - | chr2_4:20137796-20137815 | Msa0320000:CDS | 35.0% | |
| ATAAGCCTTGCAACTACATT+AGG | + | chr2_4:20137894-20137913 | None:intergenic | 35.0% | |
| TAATGTAGTTGCAAGGCTTA+TGG | - | chr2_4:20137893-20137912 | Msa0320000:CDS | 35.0% | |
| AATGTAGTTGCAAGGCTTAT+GGG | - | chr2_4:20137894-20137913 | Msa0320000:CDS | 35.0% | |
| ! | GGTCTAGTAATAACCTTTTG+AGG | + | chr2_4:20138068-20138087 | None:intergenic | 35.0% |
| !! | AGAAGTATTGCCTCCAAAAT+CGG | - | chr2_4:20138106-20138125 | Msa0320000:CDS | 35.0% |
| AAAACCGGGATTCTTAATAG+GGG | + | chr2_4:20138168-20138187 | None:intergenic | 35.0% | |
| CAAAACCGGGATTCTTAATA+GGG | + | chr2_4:20138169-20138188 | None:intergenic | 35.0% | |
| ACAAAACCGGGATTCTTAAT+AGG | + | chr2_4:20138170-20138189 | None:intergenic | 35.0% | |
| ATTGTTGGATGGAACAAAAC+CGG | + | chr2_4:20138183-20138202 | None:intergenic | 35.0% | |
| ATATAAGCAGGATTGTTGGA+TGG | + | chr2_4:20138194-20138213 | None:intergenic | 35.0% | |
| CAATCCTGCTTATATAATGG+AGG | - | chr2_4:20138199-20138218 | Msa0320000:CDS | 35.0% | |
| GGTCAAAGATCTTAGAGATA+AGG | - | chr2_4:20138301-20138320 | Msa0320000:CDS | 35.0% | |
| CAAAGATCTTAGAGATAAGG+TGG | - | chr2_4:20138304-20138323 | Msa0320000:CDS | 35.0% | |
| TCTCATCAGAATCTACTCAA+AGG | - | chr2_4:20138426-20138445 | Msa0320000:CDS | 35.0% | |
| ! | AATGCTGTGAAGTGTTTACA+GGG | - | chr2_4:20138461-20138480 | Msa0320000:CDS | 35.0% |
| GACAATCTTTGAACAAAAGC+TGG | - | chr2_4:20138483-20138502 | Msa0320000:CDS | 35.0% | |
| TCTTTGAACAAAAGCTGGAA+TGG | - | chr2_4:20138488-20138507 | Msa0320000:CDS | 35.0% | |
| CAAGGTAGAAAAGTTACTAC+TGG | - | chr2_4:20138848-20138867 | Msa0320000:CDS | 35.0% | |
| ! | TCCGACTTTAGATTTTGCAA+TGG | + | chr2_4:20138915-20138934 | None:intergenic | 35.0% |
| ! | TCTGTAGACCTTTTCTTTCT+AGG | + | chr2_4:20139007-20139026 | None:intergenic | 35.0% |
| AAAGAAAAGGTCTACAGACA+AGG | - | chr2_4:20139009-20139028 | Msa0320000:CDS | 35.0% | |
| CGAAGTGAAAAAGAAAGACA+TGG | - | chr2_4:20139129-20139148 | Msa0320000:CDS | 35.0% | |
| TAATGGTGTAGTGAATGTGA+AGG | + | chr2_4:20139164-20139183 | None:intergenic | 35.0% | |
| CATTCACTACACCATTAACA+AGG | - | chr2_4:20139167-20139186 | Msa0320000:CDS | 35.0% | |
| TGCTTGATACAGACAATACA+AGG | - | chr2_4:20139275-20139294 | Msa0320000:CDS | 35.0% | |
| !! | CTGTTCTAAAAGGATACCTA+AGG | + | chr2_4:20139335-20139354 | None:intergenic | 35.0% |
| ! | CCTTCAACTTCTGTTCTAAA+AGG | + | chr2_4:20139345-20139364 | None:intergenic | 35.0% |
| !!! | CCTTTTAGAACAGAAGTTGA+AGG | - | chr2_4:20139342-20139361 | Msa0320000:CDS | 35.0% |
| AAGTTGAAGGAATTGACAAG+TGG | - | chr2_4:20139355-20139374 | Msa0320000:CDS | 35.0% | |
| ! | CAATGATGATTCTGGAAGAT+TGG | + | chr2_4:20139509-20139528 | None:intergenic | 35.0% |
| !! | CAGGCCTAACTTTTTGTTTA+TGG | + | chr2_4:20139637-20139656 | None:intergenic | 35.0% |
| ! | AGTTCTTGAGCCTTCATTTT+CGG | - | chr2_4:20139840-20139859 | Msa0320000:CDS | 35.0% |
| ACTATGATAAAGAAGCAGAC+AGG | - | chr2_4:20140123-20140142 | Msa0320000:intron | 35.0% | |
| TTGGTAGATCATCAACTACA+TGG | - | chr2_4:20140166-20140185 | Msa0320000:intron | 35.0% | |
| TGGTAGATCATCAACTACAT+GGG | - | chr2_4:20140167-20140186 | Msa0320000:intron | 35.0% | |
| ACGATGAATCAAGGATAGAA+AGG | - | chr2_4:20140325-20140344 | Msa0320000:intron | 35.0% | |
| TGATTGTGTGAGTGAATGTA+TGG | - | chr2_4:20140359-20140378 | Msa0320000:intron | 35.0% | |
| AGATGTAGAAGTTATGTTGG+TGG | - | chr2_4:20140387-20140406 | Msa0320000:intron | 35.0% | |
| GGATACAAAATGTGGACAAA+AGG | - | chr2_4:20140411-20140430 | Msa0320000:intron | 35.0% | |
| GGTGAAAAGAAAAGATTGGT+TGG | - | chr2_4:20140443-20140462 | Msa0320000:intron | 35.0% | |
| !! | TTCAATGGTTGATGAACTTG+TGG | - | chr2_4:20140512-20140531 | Msa0320000:intron | 35.0% |
| AAGGATATGAGTAGCCAATA+TGG | - | chr2_4:20140537-20140556 | Msa0320000:intron | 35.0% | |
| AATCCAACCACTTTCCATAT+TGG | + | chr2_4:20140554-20140573 | None:intergenic | 35.0% | |
| !! | GAGGTTGATGCTTATGAATT+TGG | - | chr2_4:20140576-20140595 | Msa0320000:intron | 35.0% |
| TTCATGGAAGTTGGATTATC+AGG | - | chr2_4:20140739-20140758 | Msa0320000:five_prime_UTR | 35.0% | |
| !! | AAAAATTTTGCTGCTTCTGG+TGG | - | chr2_4:20140805-20140824 | Msa0320000:five_prime_UTR | 35.0% |
| !! | AAAATTTTGCTGCTTCTGGT+GGG | - | chr2_4:20140806-20140825 | Msa0320000:five_prime_UTR | 35.0% |
| GGTTCAGTAGTACTAGTATC+TGG | - | chr2_4:20137142-20137161 | Msa0320000:CDS | 40.0% | |
| GCATCAATTTATGGACACCT+TGG | - | chr2_4:20137204-20137223 | Msa0320000:CDS | 40.0% | |
| !! | CTGAGTTCTGCTTTTGAAGA+TGG | - | chr2_4:20137408-20137427 | Msa0320000:CDS | 40.0% |
| TGTACCTGGTAAATCTGACT+TGG | + | chr2_4:20137521-20137540 | None:intergenic | 40.0% | |
| GATGAAGACGAAAATGGTGT+TGG | - | chr2_4:20137795-20137814 | Msa0320000:CDS | 40.0% | |
| ! | TGAAGACGAAAATGGTGTTG+GGG | - | chr2_4:20137797-20137816 | Msa0320000:CDS | 40.0% |
| TCTGTTACAAGTGATGACTG+TGG | - | chr2_4:20137858-20137877 | Msa0320000:CDS | 40.0% | |
| TTAGATTCTTTGCCTCCTTC+CGG | - | chr2_4:20137918-20137937 | Msa0320000:CDS | 40.0% | |
| GGGATCTTCTAGCAATTTCA+TGG | - | chr2_4:20138034-20138053 | Msa0320000:CDS | 40.0% | |
| !!! | ATTGATCTTGCCGATTTTGG+AGG | + | chr2_4:20138119-20138138 | None:intergenic | 40.0% |
| !!! | GGAATTGATCTTGCCGATTT+TGG | + | chr2_4:20138122-20138141 | None:intergenic | 40.0% |
| TTGTCCCCTATTAAGAATCC+CGG | - | chr2_4:20138161-20138180 | Msa0320000:CDS | 40.0% | |
| TTGTTGGATGGAACAAAACC+GGG | + | chr2_4:20138182-20138201 | None:intergenic | 40.0% | |
| ACTGAAGATGACGCAATAAG+AGG | + | chr2_4:20138347-20138366 | None:intergenic | 40.0% | |
| ! | CGTCATCTTCAGTAGCTTTT+AGG | - | chr2_4:20138354-20138373 | Msa0320000:CDS | 40.0% |
| !!! | CTTCAGTAGCTTTTAGGACT+CGG | - | chr2_4:20138360-20138379 | Msa0320000:CDS | 40.0% |
| !!! | TTCAGTAGCTTTTAGGACTC+GGG | - | chr2_4:20138361-20138380 | Msa0320000:CDS | 40.0% |
| ! | GAATGCTGTGAAGTGTTTAC+AGG | - | chr2_4:20138460-20138479 | Msa0320000:CDS | 40.0% |
| GGAGACTTAACAGATGTTTC+CGG | + | chr2_4:20138518-20138537 | None:intergenic | 40.0% | |
| GTGAATGTTCAAAGAAGGGA+AGG | - | chr2_4:20138608-20138627 | Msa0320000:CDS | 40.0% | |
| ! | TCATGTCGAGATGCTCTTTT+TGG | + | chr2_4:20138667-20138686 | None:intergenic | 40.0% |
| ATTTGTCTTAGGTGGCTGAT+TGG | + | chr2_4:20138693-20138712 | None:intergenic | 40.0% | |
| TTCTGAGCATTTGTCTTAGG+TGG | + | chr2_4:20138701-20138720 | None:intergenic | 40.0% | |
| TTGGAAACCAATGGCTTAGA+TGG | + | chr2_4:20138824-20138843 | None:intergenic | 40.0% | |
| ! | AACTTTTCTACCTTGCGAGT+TGG | + | chr2_4:20138843-20138862 | None:intergenic | 40.0% |
| ACTACTGGAGATTCCTCTTA+TGG | - | chr2_4:20138863-20138882 | Msa0320000:CDS | 40.0% | |
| ! | CTTGCTACATTTGACTTCAC+TGG | + | chr2_4:20139085-20139104 | None:intergenic | 40.0% |
| GACAATACAAGGTCTCCAAT+AGG | - | chr2_4:20139286-20139305 | Msa0320000:CDS | 40.0% | |
| TCTGTTGCAATCCTAGATTG+AGG | + | chr2_4:20139417-20139436 | None:intergenic | 40.0% | |
| GACAGTTTAAACAGTAGCTG+TGG | - | chr2_4:20139463-20139482 | Msa0320000:CDS | 40.0% | |
| ! | TGATTCTGGAAGATTGGTGA+AGG | + | chr2_4:20139503-20139522 | None:intergenic | 40.0% |
| TCAAGAACTGAGATTGGACT+TGG | + | chr2_4:20139829-20139848 | None:intergenic | 40.0% | |
| CAGCTTTCAACCGAAAATGA+AGG | + | chr2_4:20139853-20139872 | None:intergenic | 40.0% | |
| AGATAACTCTGCATCGGATT+CGG | + | chr2_4:20140076-20140095 | None:intergenic | 40.0% | |
| TGAGTCAGATAACTCTGCAT+CGG | + | chr2_4:20140082-20140101 | None:intergenic | 40.0% | |
| CAGCTTCTTCAACATCAACT+AGG | - | chr2_4:20140100-20140119 | Msa0320000:intron | 40.0% | |
| AACCAGTTAGAAAGCCGAAA+GGG | - | chr2_4:20140288-20140307 | Msa0320000:intron | 40.0% | |
| ! | TGTAGAAGTTATGTTGGTGG+AGG | - | chr2_4:20140390-20140409 | Msa0320000:intron | 40.0% |
| TTGGTGGAGGATACAAAATG+TGG | - | chr2_4:20140403-20140422 | Msa0320000:intron | 40.0% | |
| GTGGACAAAAGGGTTTGAAA+TGG | - | chr2_4:20140422-20140441 | Msa0320000:intron | 40.0% | |
| GTTGGCAAAAGATGTGTACA+AGG | - | chr2_4:20140461-20140480 | Msa0320000:intron | 40.0% | |
| GAAAGGGATGAGAGATTCAA+TGG | - | chr2_4:20140497-20140516 | Msa0320000:intron | 40.0% | |
| TGAGTAGCCAATATGGAAAG+TGG | - | chr2_4:20140544-20140563 | Msa0320000:intron | 40.0% | |
| TAGCCAATATGGAAAGTGGT+TGG | - | chr2_4:20140548-20140567 | Msa0320000:intron | 40.0% | |
| TGGAAAGTGGTTGGATTATG+AGG | - | chr2_4:20140557-20140576 | Msa0320000:intron | 40.0% | |
| !! | AAATTTTGCTGCTTCTGGTG+GGG | - | chr2_4:20140807-20140826 | Msa0320000:five_prime_UTR | 40.0% |
| TCGAGGTCCAATCAAACAAG+TGG | + | chr2_4:20137474-20137493 | None:intergenic | 45.0% | |
| GCATCCAAGTCAGATTTACC+AGG | - | chr2_4:20137514-20137533 | Msa0320000:intron | 45.0% | |
| TCTCATTGCCACATTGTGGT+TGG | + | chr2_4:20137666-20137685 | None:intergenic | 45.0% | |
| GATGTCTCATTGCCACATTG+TGG | + | chr2_4:20137670-20137689 | None:intergenic | 45.0% | |
| ! | CATTTTCGTCTTCATCGACC+TGG | + | chr2_4:20137791-20137810 | None:intergenic | 45.0% |
| CAGGTCGATGAAGACGAAAA+TGG | - | chr2_4:20137789-20137808 | Msa0320000:CDS | 45.0% | |
| ! | GGTGTTGGGGAATATGTTAG+AGG | - | chr2_4:20137810-20137829 | Msa0320000:CDS | 45.0% |
| GAGCTCCTAATGTAGTTGCA+AGG | - | chr2_4:20137886-20137905 | Msa0320000:CDS | 45.0% | |
| ! | TCAAAAAACGGCGTCGAGTA+GGG | + | chr2_4:20137954-20137973 | None:intergenic | 45.0% |
| ! | ATCAAAAAACGGCGTCGAGT+AGG | + | chr2_4:20137955-20137974 | None:intergenic | 45.0% |
| CATGGAGTCAAAGCCTCAAA+AGG | - | chr2_4:20138052-20138071 | Msa0320000:CDS | 45.0% | |
| GCAGCCTCCATTATATAAGC+AGG | + | chr2_4:20138206-20138225 | None:intergenic | 45.0% | |
| CCCAGGTTCAAGAATTCTTG+CGG | + | chr2_4:20138228-20138247 | None:intergenic | 45.0% | |
| CCGCAAGAATTCTTGAACCT+GGG | - | chr2_4:20138225-20138244 | Msa0320000:CDS | 45.0% | |
| ! | ATGCGCTTTAGCCTTTGCTT+GGG | + | chr2_4:20138255-20138274 | None:intergenic | 45.0% |
| ! | AATGCGCTTTAGCCTTTGCT+TGG | + | chr2_4:20138256-20138275 | None:intergenic | 45.0% |
| AGCAAAGGCTAAAGCGCATT+TGG | - | chr2_4:20138256-20138275 | Msa0320000:CDS | 45.0% | |
| ATCATCGACGGTCTCACTAA+GGG | - | chr2_4:20138280-20138299 | Msa0320000:CDS | 45.0% | |
| ACACTTCACAGCATTCGACT+CGG | + | chr2_4:20138456-20138475 | None:intergenic | 45.0% | |
| GAATCTTCTTCTGCGTGTGT+AGG | + | chr2_4:20138539-20138558 | None:intergenic | 45.0% | |
| ACCGGTGGCAGAAATTTGAT+GGG | - | chr2_4:20138641-20138660 | Msa0320000:CDS | 45.0% | |
| ATCAGTGCCATCTAAGCCAT+TGG | - | chr2_4:20138814-20138833 | Msa0320000:CDS | 45.0% | |
| CTGGAGATTCCTCTTATGGA+CGG | - | chr2_4:20138867-20138886 | Msa0320000:CDS | 45.0% | |
| AAAGGTCTACAGACAAGGAC+TGG | - | chr2_4:20139014-20139033 | Msa0320000:CDS | 45.0% | |
| GGATTGCTGCTCCTTGTTAA+TGG | + | chr2_4:20139181-20139200 | None:intergenic | 45.0% | |
| TTAACAAGGAGCAGCAATCC+TGG | - | chr2_4:20139181-20139200 | Msa0320000:CDS | 45.0% | |
| GTATTCTTTCCACCTTGTCG+AGG | + | chr2_4:20139217-20139236 | None:intergenic | 45.0% | |
| ATGTTTGCAGGGTGATGAGA+TGG | - | chr2_4:20139777-20139796 | Msa0320000:CDS | 45.0% | |
| TGTCGGCAATTGAATGACAG+AGG | + | chr2_4:20139805-20139824 | None:intergenic | 45.0% | |
| ! | CTGAGATTGGACTTGGTTGT+CGG | + | chr2_4:20139822-20139841 | None:intergenic | 45.0% |
| GAAGGCTCAAGAACTGAGAT+TGG | + | chr2_4:20139835-20139854 | None:intergenic | 45.0% | |
| GCGGATGTTATCAGTACAGA+AGG | - | chr2_4:20139889-20139908 | Msa0320000:intron | 45.0% | |
| AGTTCACAACCTCACGAGAT+CGG | + | chr2_4:20140257-20140276 | None:intergenic | 45.0% | |
| CAACCAGTTAGAAAGCCGAA+AGG | - | chr2_4:20140287-20140306 | Msa0320000:intron | 45.0% | |
| TCAAGAGCGACGATGAATCA+AGG | - | chr2_4:20140316-20140335 | Msa0320000:intron | 45.0% | |
| !! | GGTTGATGAACTTGTGGACA+AGG | - | chr2_4:20140518-20140537 | Msa0320000:intron | 45.0% |
| GGCAATGAGACATCCCTATC+TGG | - | chr2_4:20137676-20137695 | Msa0320000:intron | 50.0% | |
| TTTGCCTCCTTCCGGTTTCT+CGG | - | chr2_4:20137926-20137945 | Msa0320000:CDS | 50.0% | |
| GCCGCAAGAATTCTTGAACC+TGG | - | chr2_4:20138224-20138243 | Msa0320000:CDS | 50.0% | |
| AGCGCATTTGGCATCATCGA+CGG | - | chr2_4:20138268-20138287 | Msa0320000:CDS | 50.0% | |
| CATCATCGACGGTCTCACTA+AGG | - | chr2_4:20138279-20138298 | Msa0320000:CDS | 50.0% | |
| ! | AAGGTGGACTCTTCGCAGAA+AGG | - | chr2_4:20138320-20138339 | Msa0320000:CDS | 50.0% |
| CAAAAGCTGGAATGGAGCAC+CGG | - | chr2_4:20138496-20138515 | Msa0320000:CDS | 50.0% | |
| ! | AGGGAAGGTTTGAGTTCGAC+CGG | - | chr2_4:20138623-20138642 | Msa0320000:CDS | 50.0% |
| GACCGGTGGCAGAAATTTGA+TGG | - | chr2_4:20138640-20138659 | Msa0320000:CDS | 50.0% | |
| GCCCATCAAATTTCTGCCAC+CGG | + | chr2_4:20138645-20138664 | None:intergenic | 50.0% | |
| ! | CCTTGCGAGTTGGAAACCAA+TGG | + | chr2_4:20138833-20138852 | None:intergenic | 50.0% |
| !! | CCATTGGTTTCCAACTCGCA+AGG | - | chr2_4:20138830-20138849 | Msa0320000:CDS | 50.0% |
| GCTTCTATGCCGTCCATAAG+AGG | + | chr2_4:20138879-20138898 | None:intergenic | 50.0% | |
| ATCGAAAAAGTCAGCCGTGG+AGG | - | chr2_4:20138934-20138953 | Msa0320000:CDS | 50.0% | |
| ! | TTCGCTATCGGTTACCTCCA+CGG | + | chr2_4:20138951-20138970 | None:intergenic | 50.0% |
| ! | AACTCTGCATCGGATTCGGT+TGG | + | chr2_4:20140072-20140091 | None:intergenic | 50.0% |
| CTCCCTTTCGGCTTTCTAAC+TGG | + | chr2_4:20140293-20140312 | None:intergenic | 50.0% | |
| CAGTTAGAAAGCCGAAAGGG+AGG | - | chr2_4:20140291-20140310 | Msa0320000:intron | 50.0% | |
| CGCTCTTGAAACCTCCCTTT+CGG | + | chr2_4:20140305-20140324 | None:intergenic | 50.0% | |
| TAGGGATCCGAGAAACCGGA+AGG | + | chr2_4:20137936-20137955 | None:intergenic | 55.0% | |
| CGAGTAGGGATCCGAGAAAC+CGG | + | chr2_4:20137940-20137959 | None:intergenic | 55.0% | |
| ! | CGCTTTAGCCTTTGCTTGGG+AGG | + | chr2_4:20138252-20138271 | None:intergenic | 55.0% |
| ! | GAAGGTTTGAGTTCGACCGG+TGG | - | chr2_4:20138626-20138645 | Msa0320000:CDS | 55.0% |
| ! | GGACGGCATAGAAGCTCTAG+TGG | - | chr2_4:20138884-20138903 | Msa0320000:CDS | 55.0% |
| CGGATCGAAAAAGTCAGCCG+TGG | - | chr2_4:20138931-20138950 | Msa0320000:CDS | 55.0% | |
| ! | TGTCGAGGTGTCACAGAACC+AGG | + | chr2_4:20139202-20139221 | None:intergenic | 55.0% |
| GGTTCTGTGACACCTCGACA+AGG | - | chr2_4:20139202-20139221 | Msa0320000:CDS | 55.0% | |
| TCTGTGACACCTCGACAAGG+TGG | - | chr2_4:20139205-20139224 | Msa0320000:CDS | 55.0% | |
| GTAATTGGCGGCGATGCCTT+AGG | - | chr2_4:20139316-20139335 | Msa0320000:CDS | 55.0% | |
| CTGTGAATCCTCGATGAGCG+CGG | - | chr2_4:20139870-20139889 | Msa0320000:intron | 55.0% | |
| GATAACATCCGCGCTCATCG+AGG | + | chr2_4:20139881-20139900 | None:intergenic | 55.0% | |
| GGATCCGAGAAACCGGAAGG+AGG | + | chr2_4:20137933-20137952 | None:intergenic | 60.0% | |
| ACCTGGGTCCTCCCAAGCAA+AGG | - | chr2_4:20138241-20138260 | Msa0320000:CDS | 60.0% | |
| AACCTCACGAGATCGGCCGA+GGG | + | chr2_4:20140250-20140269 | None:intergenic | 60.0% | |
| GCCTTTGCTTGGGAGGACCC+AGG | + | chr2_4:20138245-20138264 | None:intergenic | 65.0% | |
| TTCCCTCGGCCGATCTCGTG+AGG | - | chr2_4:20140245-20140264 | Msa0320000:intron | 65.0% | |
| CAACCTCACGAGATCGGCCG+AGG | + | chr2_4:20140251-20140270 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 20136397 | 20140891 | 20136397 | ID=Msa0320000;Name=Msa0320000 |
| chr2_4 | mRNA | 20136397 | 20140891 | 20136397 | ID=Msa0320000-mRNA-1;Parent=Msa0320000;Name=Msa0320000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=214|1|1|1|0.66|0.57|7|223|903 |
| chr2_4 | exon | 20136397 | 20137287 | 20136397 | ID=Msa0320000-mRNA-1:exon:7446;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20137378 | 20137501 | 20137378 | ID=Msa0320000-mRNA-1:exon:7445;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20137745 | 20139496 | 20137745 | ID=Msa0320000-mRNA-1:exon:7444;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20139591 | 20139649 | 20139591 | ID=Msa0320000-mRNA-1:exon:7443;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20139753 | 20139885 | 20139753 | ID=Msa0320000-mRNA-1:exon:7442;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20140681 | 20140842 | 20140681 | ID=Msa0320000-mRNA-1:exon:7441;Parent=Msa0320000-mRNA-1 |
| chr2_4 | exon | 20140864 | 20140891 | 20140864 | ID=Msa0320000-mRNA-1:exon:7440;Parent=Msa0320000-mRNA-1 |
| chr2_4 | five_prime_UTR | 20140864 | 20140891 | 20140864 | ID=Msa0320000-mRNA-1:five_prime_utr;Parent=Msa0320000-mRNA-1 |
| chr2_4 | five_prime_UTR | 20140681 | 20140842 | 20140681 | ID=Msa0320000-mRNA-1:five_prime_utr;Parent=Msa0320000-mRNA-1 |
| chr2_4 | five_prime_UTR | 20139862 | 20139885 | 20139862 | ID=Msa0320000-mRNA-1:five_prime_utr;Parent=Msa0320000-mRNA-1 |
| chr2_4 | CDS | 20139753 | 20139861 | 20139753 | ID=Msa0320000-mRNA-1:cds;Parent=Msa0320000-mRNA-1 |
| chr2_4 | CDS | 20139591 | 20139649 | 20139591 | ID=Msa0320000-mRNA-1:cds;Parent=Msa0320000-mRNA-1 |
| chr2_4 | CDS | 20137745 | 20139496 | 20137745 | ID=Msa0320000-mRNA-1:cds;Parent=Msa0320000-mRNA-1 |
| chr2_4 | CDS | 20137378 | 20137501 | 20137378 | ID=Msa0320000-mRNA-1:cds;Parent=Msa0320000-mRNA-1 |
| chr2_4 | CDS | 20136620 | 20137287 | 20136620 | ID=Msa0320000-mRNA-1:cds;Parent=Msa0320000-mRNA-1 |
| chr2_4 | three_prime_UTR | 20136397 | 20136619 | 20136397 | ID=Msa0320000-mRNA-1:three_prime_utr;Parent=Msa0320000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
