AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0836150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836150 MtrunA17_Chr5g0402061 96.562 1018 32 1 2 1016 529 1546 0.0 2051
Msa0836150 MtrunA17_Chr3g0130421 26.941 657 395 14 148 778 370 967 2.51e-55 209
Msa0836150 MtrunA17_Chr7g0272751 22.535 710 407 18 135 766 1207 1851 1.63e-25 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836150 AT5G67100.2 68.830 1017 309 7 1 1014 513 1524 0.0 1454
Msa0836150 AT5G67100.1 68.830 1017 309 7 1 1014 513 1524 0.0 1454
Msa0836150 AT5G63960.1 27.381 672 390 17 127 766 361 966 1.71e-53 204
Msa0836150 AT5G63960.2 27.246 668 382 17 131 766 388 983 6.01e-53 202
Msa0836150 AT1G67500.1 23.410 739 418 25 108 766 1072 1742 1.68e-28 124
Msa0836150 AT1G67500.5 23.410 739 418 25 108 766 1071 1741 1.69e-28 124
Msa0836150 AT1G67500.3 23.410 739 418 25 108 766 1071 1741 1.69e-28 124
Msa0836150 AT1G67500.7 23.410 739 418 25 108 766 1097 1767 1.74e-28 124
Msa0836150 AT1G67500.2 23.410 739 418 25 108 766 1097 1767 1.74e-28 124
Msa0836150 AT1G67500.6 23.410 739 418 25 108 766 1072 1742 1.89e-28 124
Msa0836150 AT1G67500.4 25.128 585 312 20 108 619 1071 1602 6.84e-27 119

Find 235 sgRNAs with CRISPR-Local

Find 598 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTGGACATAATATTTC+TGG 0.126294 5_4:+9609763 Msa0836150:CDS
AAACAATCAGCCAGTCTTTC+AGG 0.154926 5_4:-9615660 None:intergenic
TCTGATTAAAAGAAAGATTA+TGG 0.164125 5_4:+9607973 Msa0836150:exon
GAACAATATATTTCTTATTA+TGG 0.176581 5_4:-9611730 None:intergenic
TGATTTGGTCAGATTGAATA+TGG 0.185539 5_4:+9611463 Msa0836150:intron
TAAAATTAAATGCAGGTATC+AGG 0.216098 5_4:+9616096 Msa0836150:intron
CAAATATTTGTATTGTTCTA+TGG 0.228019 5_4:-9617499 None:intergenic
ATGTTCTCGTGACCTATTAA+AGG 0.243064 5_4:+9610381 Msa0836150:CDS
GAAAGACTGGCTGATTGTTT+AGG 0.257739 5_4:+9615663 Msa0836150:CDS
GTTTGCGAATAACAGTAAAA+TGG 0.261527 5_4:-9609429 None:intergenic
TCAAAATAACTTGAATTTAG+AGG 0.262421 5_4:+9613623 Msa0836150:CDS
AATAATTTACCTCCTTTAAT+AGG 0.262800 5_4:-9610393 None:intergenic
AGGAATCTGACTACAATTTC+TGG 0.268580 5_4:+9616233 Msa0836150:CDS
AAAGACTGGCTGATTGTTTA+GGG 0.269262 5_4:+9615664 Msa0836150:CDS
GAAGAATTCCTGATGTCTTT+AGG 0.282882 5_4:-9608196 None:intergenic
AGCCACATCCTTGGTTCATT+AGG 0.293116 5_4:+9617441 Msa0836150:three_prime_UTR
TCTATACCCTTCCATCATTC+AGG 0.304023 5_4:+9611988 Msa0836150:CDS
CCGTTGCAGCGAGGATAATT+TGG 0.311908 5_4:-9616735 None:intergenic
GCAGCTGGACAAACTGAATT+TGG 0.315705 5_4:-9617336 None:intergenic
ACGTCTTTGTGCATCAATTC+AGG 0.315817 5_4:+9615629 Msa0836150:CDS
GTTGTTGCAATTTAAATTGC+AGG 0.317319 5_4:+9617306 Msa0836150:exon
GCCACATCCTTGGTTCATTA+GGG 0.318541 5_4:+9617442 Msa0836150:three_prime_UTR
GCTATCATGTCTTGTGTTGC+CGG 0.318803 5_4:+9610334 Msa0836150:CDS
TTTGAGTAGGGCGGTAATTC+AGG 0.320292 5_4:+9615405 Msa0836150:intron
AGCTTGTTAGCGAAAGATTT+AGG 0.323341 5_4:+9614459 Msa0836150:CDS
ATCAGGGACCGTTGTGCCTT+TGG 0.325476 5_4:+9617261 Msa0836150:CDS
TCAACTACTTTGACATGGTT+TGG 0.325686 5_4:-9617534 None:intergenic
ATTTCCAATGGGATTCAATA+AGG 0.326657 5_4:+9609465 Msa0836150:CDS
AAGCAGCATGTGGTCTAAAC+TGG 0.332642 5_4:+9610240 Msa0836150:CDS
TGATAAATACATATTACTTC+TGG 0.334762 5_4:+9611955 Msa0836150:CDS
TGCTTAGAAATTGATCTTGA+TGG 0.337619 5_4:+9614238 Msa0836150:CDS
CCCTGCAATTATAGCCAATC+AGG 0.338489 5_4:+9616306 Msa0836150:CDS
ACCTGATTGGCTATAATTGC+AGG 0.339845 5_4:-9616307 None:intergenic
TTATCATATAGACCCTTCTT+TGG 0.343475 5_4:-9611938 None:intergenic
TAAGATAGACATACCTCATA+TGG 0.343964 5_4:-9614334 None:intergenic
TGGTGATACTGATTCAATAA+TGG 0.344388 5_4:+9613769 Msa0836150:CDS
AGAGGCAAAACATTTGGTTT+TGG 0.352552 5_4:+9610301 Msa0836150:CDS
TTGATATTGTCCGCCGTGAC+TGG 0.360851 5_4:+9614436 Msa0836150:CDS
GTAAAATGGGTCAGCATTCC+AGG 0.361669 5_4:-9609415 None:intergenic
TCAGGGACCGTTGTGCCTTT+GGG 0.365318 5_4:+9617262 Msa0836150:CDS
ATCTGTTGTCAGTTGCAATA+TGG 0.366117 5_4:+9608318 Msa0836150:CDS
GAAAGATTATGGGGCCTTCA+TGG 0.369078 5_4:+9607984 Msa0836150:exon
GATAGAAGAGGCAAAACATT+TGG 0.370717 5_4:+9610295 Msa0836150:CDS
GTCAAATACACTAGAGCAGC+TGG 0.373201 5_4:-9616146 None:intergenic
CTGATTAAAAGAAAGATTAT+GGG 0.374913 5_4:+9607974 Msa0836150:exon
CACCCTTTGGGATGCTGAGC+AGG 0.387444 5_4:-9608029 None:intergenic
GCAAATAAAAGTGAGCTTGT+AGG 0.388083 5_4:-9615825 None:intergenic
TTGGCATCAGGATATGCTTC+GGG 0.389548 5_4:-9615060 None:intergenic
AAAGAAATATGCAGCTGTTA+AGG 0.389650 5_4:+9614291 Msa0836150:CDS
GCGTAATTAGAAAACTTGTC+TGG 0.392510 5_4:-9611752 None:intergenic
TTAAATTAATAATACCTGAT+TGG 0.392668 5_4:-9616320 None:intergenic
AAGCAACAAGGTTACGCATC+TGG 0.394695 5_4:+9615221 Msa0836150:CDS
CAAATTATCCTCGCTGCAAC+GGG 0.402834 5_4:+9616736 Msa0836150:CDS
TTTCAATTCATCCGGATGTC+TGG 0.407062 5_4:-9615454 None:intergenic
TTTAAATCTATTTGTATGTT+GGG 0.407317 5_4:+9616181 Msa0836150:CDS
CGAATATAAGTGGCAACCTA+TGG 0.409541 5_4:+9611557 Msa0836150:CDS
TGATTACTATTTGTCACAAC+AGG 0.415469 5_4:+9615506 Msa0836150:CDS
TGGTCTTAAACGTCAGCAAC+TGG 0.417699 5_4:+9613244 Msa0836150:CDS
GAGCAACTTCCTTCCGAGAC+TGG 0.418315 5_4:-9610717 None:intergenic
CACTGAAGCTTACTGCCAAC+AGG 0.420094 5_4:+9613282 Msa0836150:CDS
TCTGGCACGTAGAGCAATTC+CGG 0.420126 5_4:-9615436 None:intergenic
ATGGATAGCGACGTTCTTGT+TGG 0.420903 5_4:+9609748 Msa0836150:CDS
ACTGTTATTCGCAAACTTGA+TGG 0.422114 5_4:+9609436 Msa0836150:CDS
TTTGGCATCAGGATATGCTT+CGG 0.422494 5_4:-9615061 None:intergenic
TGCTTCCTATGCTGGAGGAC+TGG 0.425821 5_4:+9611907 Msa0836150:CDS
GGATGAATTGAAACGAGAAC+AGG 0.425921 5_4:+9615464 Msa0836150:CDS
TGCCACTTATATTCGTCAAC+TGG 0.426257 5_4:-9611549 None:intergenic
TGTTCTCGTTTCAATTCATC+CGG 0.430135 5_4:-9615462 None:intergenic
GGGCACAAGCCCTGAAAGAC+TGG 0.430349 5_4:+9615650 Msa0836150:CDS
AGATTCCTCCGCGCCTGAGC+TGG 0.431352 5_4:-9616218 None:intergenic
ATCTTGATGGTTTGTATAAG+AGG 0.431498 5_4:+9614251 Msa0836150:CDS
GCATCGATGAAAACTGCATC+TGG 0.432174 5_4:+9613224 Msa0836150:CDS
TACGCATCTGGTTGCTCTGT+TGG 0.440562 5_4:+9615233 Msa0836150:CDS
ATTAGGTCAATAAGAAATAT+CGG 0.442964 5_4:+9614215 Msa0836150:intron
GATTTGGTCAGATTGAATAT+GGG 0.443341 5_4:+9611464 Msa0836150:intron
TACTGTTTGTTATATAGAAA+AGG 0.443509 5_4:+9616947 Msa0836150:CDS
TCGAAGTGTCAGCTTTCGTT+TGG 0.444477 5_4:+9616683 Msa0836150:CDS
TTTGCGAATAACAGTAAAAT+GGG 0.445477 5_4:-9609428 None:intergenic
TGCTCTACGTGCCAGACATC+CGG 0.446141 5_4:+9615443 Msa0836150:CDS
GACGATGCAGATATTAATGA+TGG 0.446316 5_4:+9611833 Msa0836150:CDS
ACTGTCTTGTAGGTGATCTA+TGG 0.446979 5_4:+9613749 Msa0836150:intron
TTGCCTCTTCTATCGAGCTT+AGG 0.447488 5_4:-9610286 None:intergenic
TTAGATTGACACTCCTATGC+TGG 0.447945 5_4:+9609375 Msa0836150:intron
TTACGTAATTTGCTGTGAGC+AGG 0.452432 5_4:+9615268 Msa0836150:CDS
TGTCAGTTGCAATATGGTTA+AGG 0.454054 5_4:+9608324 Msa0836150:CDS
TGTCCCAAATGCTTTGAAAA+TGG 0.458655 5_4:+9616268 Msa0836150:CDS
AATGAAAAGCCAACCAGCTC+AGG 0.460850 5_4:+9616205 Msa0836150:CDS
AGAAGGAGTTGATCAAAATC+AGG 0.461010 5_4:+9617202 Msa0836150:CDS
AACAATCAGCCAGTCTTTCA+GGG 0.461161 5_4:-9615659 None:intergenic
CATCAACAATACAAAAGATC+AGG 0.461480 5_4:+9617244 Msa0836150:CDS
GATACTCCACCCTCTGTGCC+CGG 0.462539 5_4:-9611691 None:intergenic
CTTTGGGTGGGTGAAGCTGC+AGG 0.463270 5_4:+9617278 Msa0836150:CDS
TGGCACCTACTAGCTCCATC+AGG 0.463637 5_4:-9610777 None:intergenic
TTGCTTCATGTCAGGTCAAA+CGG 0.465105 5_4:+9616502 Msa0836150:intron
GCATATTCTTCTTACTTGTA+GGG 0.472531 5_4:-9613469 None:intergenic
AATATTATCAACCTGAATGA+TGG 0.472962 5_4:-9611999 None:intergenic
TTTATTGCTGTGACAACCAC+GGG 0.474541 5_4:-9608244 None:intergenic
GGGTGCCCGGGCACAGAGGG+TGG 0.475640 5_4:+9611685 Msa0836150:intron
CGTCTTTGTGCATCAATTCA+GGG 0.477261 5_4:+9615630 Msa0836150:CDS
GGTGTATGATGCAGTATGTA+TGG 0.478407 5_4:+9613390 Msa0836150:intron
CAACGGGCATCTTAATAGAA+AGG 0.478556 5_4:+9616752 Msa0836150:CDS
TTGATCAACTCCTTCTCTAT+CGG 0.481085 5_4:-9617195 None:intergenic
AAAGTAAAATCTCACCCTTT+GGG 0.481239 5_4:-9608041 None:intergenic
TTTGAAACTTGTAGCCATGA+AGG 0.482549 5_4:-9607998 None:intergenic
GTTTAAATCTATTTGTATGT+TGG 0.483070 5_4:+9616180 Msa0836150:CDS
GATGGGAATATATTTCCAAT+GGG 0.483117 5_4:+9609454 Msa0836150:CDS
AGTGTCAGCTTTCGTTTGGT+TGG 0.485403 5_4:+9616687 Msa0836150:CDS
CTGCCATCTAGTAAAACAAC+TGG 0.488033 5_4:+9612219 Msa0836150:CDS
AACGGATGCATGGTTGTCAA+TGG 0.488628 5_4:+9611489 Msa0836150:CDS
GGGACCGTTGTGCCTTTGGG+TGG 0.492793 5_4:+9617265 Msa0836150:CDS
CTGTTATTCGCAAACTTGAT+GGG 0.493609 5_4:+9609437 Msa0836150:CDS
TCAGGGTGCCCGGGCACAGA+GGG 0.494045 5_4:+9611682 Msa0836150:intron
AAGATAGACATACCTCATAT+GGG 0.496561 5_4:-9614333 None:intergenic
GTTAAGGTGCAGTTTAAAGA+TGG 0.496764 5_4:+9614307 Msa0836150:CDS
TAAAGATGGCACCCCATATG+AGG 0.497321 5_4:+9614321 Msa0836150:CDS
TATGTGGAGGCGAGACAAAA+AGG 0.497554 5_4:+9613202 Msa0836150:CDS
ATGCAGTATGTATGGATGCC+TGG 0.499882 5_4:+9613398 Msa0836150:intron
ACCTCCTTATTGAATCCCAT+TGG 0.503054 5_4:-9609469 None:intergenic
AATGTTACAATTACACAAGA+TGG 0.503337 5_4:+9609729 Msa0836150:CDS
ACGGACAGAAACATAAAAGC+TGG 0.503896 5_4:+9609493 Msa0836150:CDS
CCTCTTGCAGATTCATCCTG+TGG 0.504937 5_4:+9615602 Msa0836150:intron
GAATATAAGTGGCAACCTAT+GGG 0.505148 5_4:+9611558 Msa0836150:CDS
GATGCAGCAAGATCAACTAT+TGG 0.505527 5_4:-9617225 None:intergenic
TGATGGGAATATATTTCCAA+TGG 0.508055 5_4:+9609453 Msa0836150:CDS
CCAAATTATCCTCGCTGCAA+CGG 0.510957 5_4:+9616735 Msa0836150:CDS
TCCTCCGCGCCTGAGCTGGT+TGG 0.511273 5_4:-9616214 None:intergenic
GGACCGTTGTGCCTTTGGGT+GGG 0.518910 5_4:+9617266 Msa0836150:CDS
GGTAATTCAGGCAGTGCGAC+CGG 0.520830 5_4:+9615417 Msa0836150:CDS
CGCCAGTTGACGAATATAAG+TGG 0.523406 5_4:+9611547 Msa0836150:CDS
GTAACTCATGGTGTCGATGA+TGG 0.523484 5_4:+9611803 Msa0836150:CDS
TGCTCACAGCAAATTACGTA+AGG 0.524220 5_4:-9615266 None:intergenic
AAAATTAAATGCAGGTATCA+GGG 0.524836 5_4:+9616097 Msa0836150:intron
TGGATTCACATATGAGCAGC+TGG 0.529303 5_4:-9617351 None:intergenic
TCGACTCTCCTAAAGACATC+AGG 0.532688 5_4:+9608188 Msa0836150:CDS
GTAGCTTGCAAGTGAAGCTA+TGG 0.535280 5_4:+9617390 Msa0836150:three_prime_UTR
AACATAAATCAAGTGAAGCA+AGG 0.537301 5_4:+9615796 Msa0836150:CDS
TGTTCTTCTACACAGATCTC+AGG 0.538595 5_4:+9609798 Msa0836150:CDS
ATGTGAATCCACACCAGCAA+GGG 0.541895 5_4:+9617363 Msa0836150:three_prime_UTR
AGTTTAGACCACATGCTGCT+TGG 0.545440 5_4:-9610238 None:intergenic
ATTTGGTCAGATTGAATATG+GGG 0.548172 5_4:+9611465 Msa0836150:intron
AAGTGTTACAGCCACATCCT+TGG 0.548464 5_4:+9617432 Msa0836150:three_prime_UTR
TCAGATTGAATATGGGGAAA+CGG 0.550849 5_4:+9611471 Msa0836150:intron
GCTTCAGAGTGGAAGAGACC+TGG 0.555993 5_4:+9609397 Msa0836150:CDS
GAGGAACGGACAAGTAGCAT+TGG 0.557216 5_4:+9615002 Msa0836150:CDS
ACCAGATGGAGGCAAAGTCT+AGG 0.557445 5_4:+9617169 Msa0836150:intron
CCAAACTGCAAAATCCCTGA+TGG 0.557679 5_4:+9610762 Msa0836150:CDS
TTCAGGGTGCCCGGGCACAG+AGG 0.562382 5_4:+9611681 Msa0836150:intron
TTGGTTGGTGATTCTGAGCG+AGG 0.562836 5_4:+9616702 Msa0836150:CDS
ATTCAATAATGGTTTACAGT+GGG 0.564097 5_4:+9613780 Msa0836150:CDS
CTACCTGCTCAGCATCCCAA+AGG 0.565825 5_4:+9608026 Msa0836150:CDS
TTTAGGGCTTGACACATCAA+AGG 0.569052 5_4:+9615680 Msa0836150:CDS
TAAAACCAGTCCTCCAGCAT+AGG 0.569330 5_4:-9611912 None:intergenic
TCAACTGGCGTGTGAGAGGA+AGG 0.570239 5_4:-9611534 None:intergenic
TGCTTACAAGAACATGTGGC+TGG 0.570497 5_4:-9615086 None:intergenic
ACATAAATCAAGTGAAGCAA+GGG 0.571452 5_4:+9615797 Msa0836150:CDS
TTCGTCAACTGGCGTGTGAG+AGG 0.573704 5_4:-9611538 None:intergenic
AATTCACAACTCTCTCATGA+AGG 0.573872 5_4:+9614628 Msa0836150:CDS
TACAGGTACAAGAAGAAATG+AGG 0.575050 5_4:+9614983 Msa0836150:intron
CCTGATTGGCTATAATTGCA+GGG 0.575152 5_4:-9616306 None:intergenic
TCATGTCTTGTGTTGCCGGT+CGG 0.575514 5_4:+9610338 Msa0836150:CDS
ATACTCCACCCTCTGTGCCC+GGG 0.575516 5_4:-9611690 None:intergenic
ATCTTGAATTGGAAAATCCC+AGG 0.577136 5_4:-9613416 None:intergenic
TTATCAACCTGAATGATGGA+AGG 0.578579 5_4:-9611995 None:intergenic
AAACACAGCTAAACCAGTCT+CGG 0.579714 5_4:+9610704 Msa0836150:CDS
TGAAACGAGAACAGGGGACA+TGG 0.581801 5_4:+9615472 Msa0836150:CDS
ATCTAAGAAAGTTATTCAAG+AGG 0.581875 5_4:+9613832 Msa0836150:CDS
CGAGCTTAGGCATTGTAGAA+CGG 0.587020 5_4:-9610273 None:intergenic
AAATGCTTTGAAAATGGTGT+TGG 0.587131 5_4:+9616274 Msa0836150:CDS
GGGATTCAATAAGGAGGTCA+CGG 0.588606 5_4:+9609474 Msa0836150:CDS
TGCAGTATGTATGGATGCCT+GGG 0.589761 5_4:+9613399 Msa0836150:intron
ATGTTCTGTGTGTTGAAAGC+AGG 0.593394 5_4:+9609521 Msa0836150:CDS
TTATATCAACTACTTTGACA+TGG 0.593640 5_4:-9617539 None:intergenic
AGCAGCATGTGGTCTAAACT+GGG 0.594167 5_4:+9610241 Msa0836150:CDS
TACCTGCTCAGCATCCCAAA+GGG 0.596578 5_4:+9608027 Msa0836150:CDS
TATGTGAATCCACACCAGCA+AGG 0.598097 5_4:+9617362 Msa0836150:three_prime_UTR
TGATTAAAAGAAAGATTATG+GGG 0.598291 5_4:+9607975 Msa0836150:exon
GATGAATTGAAACGAGAACA+GGG 0.599023 5_4:+9615465 Msa0836150:CDS
TCAAATACACTAGAGCAGCT+GGG 0.600689 5_4:-9616145 None:intergenic
GCATTGTAGAACGGTTGAGA+CGG 0.603416 5_4:-9610264 None:intergenic
GCAACACAAGACATGATAGC+AGG 0.603626 5_4:-9610331 None:intergenic
ATCAACAATACAAAAGATCA+GGG 0.606117 5_4:+9617245 Msa0836150:CDS
GTCTAGGATACCGATAGAGA+AGG 0.606628 5_4:+9617185 Msa0836150:CDS
CAAATAGATTTAAACACAGG+AGG 0.608118 5_4:-9616172 None:intergenic
GCCAACCAGCTCAGGCGCGG+AGG 0.609906 5_4:+9616213 Msa0836150:CDS
GCCCTAATGAACCAAGGATG+TGG 0.610279 5_4:-9617443 None:intergenic
ATGCCTAAGCTCGATAGAAG+AGG 0.610476 5_4:+9610283 Msa0836150:CDS
GTATCAGGGATGTGAGCCGT+TGG 0.611599 5_4:+9616111 Msa0836150:CDS
CGGACAGAAACATAAAAGCT+GGG 0.613037 5_4:+9609494 Msa0836150:CDS
TATCAACCTGAATGATGGAA+GGG 0.614557 5_4:-9611994 None:intergenic
AAAGCCAACCAGCTCAGGCG+CGG 0.614660 5_4:+9616210 Msa0836150:CDS
GATTCAATAATGGTTTACAG+TGG 0.616159 5_4:+9613779 Msa0836150:CDS
GGCACCTACTAGCTCCATCA+GGG 0.619342 5_4:-9610776 None:intergenic
GTTTATTGCTGTGACAACCA+CGG 0.621887 5_4:-9608245 None:intergenic
ATATAAGTGGCAACCTATGG+GGG 0.622034 5_4:+9611560 Msa0836150:CDS
CAAATACACTAGAGCAGCTG+GGG 0.622513 5_4:-9616144 None:intergenic
TTCCACTCTGAAGCCAGCAT+AGG 0.625498 5_4:-9609388 None:intergenic
ACAGCTAAACCAGTCTCGGA+AGG 0.627100 5_4:+9610708 Msa0836150:CDS
CGTATCACAAAGAAGCCGAC+CGG 0.627681 5_4:-9610353 None:intergenic
TCCAATGGGATTCAATAAGG+AGG 0.627800 5_4:+9609468 Msa0836150:CDS
GCATCAGGATATGCTTCGGG+TGG 0.628312 5_4:-9615057 None:intergenic
CTGGGGCATGACAAGACCAA+CGG 0.628948 5_4:-9616127 None:intergenic
AATATAAGTGGCAACCTATG+GGG 0.633202 5_4:+9611559 Msa0836150:CDS
TTCTCGTGACCTATTAAAGG+AGG 0.634465 5_4:+9610384 Msa0836150:CDS
ATACAAATAGATTTAAACAC+AGG 0.635070 5_4:-9616175 None:intergenic
ACTGTTGAAAGATCTTCAGA+TGG 0.637112 5_4:+9612183 Msa0836150:CDS
AAATAGATTTAAACACAGGA+GGG 0.637465 5_4:-9616171 None:intergenic
GCACAAAGACGTGATACCAC+AGG 0.638333 5_4:-9615618 None:intergenic
CTGATTGGCTATAATTGCAG+GGG 0.639371 5_4:-9616305 None:intergenic
CTGCAGCTTCACCCACCCAA+AGG 0.643038 5_4:-9617277 None:intergenic
GTGCAGGTTATTGAACGCAA+AGG 0.646019 5_4:+9614411 Msa0836150:intron
CTCCTATGCTGGCTTCAGAG+TGG 0.647589 5_4:+9609386 Msa0836150:CDS
ACGAAGCGCAGAGTAACTCA+TGG 0.652101 5_4:+9611791 Msa0836150:CDS
AAGGCTGCTTCCTATGCTGG+AGG 0.654029 5_4:+9611902 Msa0836150:CDS
AATATGGGGAAACGGATGCA+TGG 0.654495 5_4:+9611479 Msa0836150:CDS
GCACAAAGATTGAAGCAACA+AGG 0.655471 5_4:+9615209 Msa0836150:CDS
TGTGAATCCACACCAGCAAG+GGG 0.659943 5_4:+9617364 Msa0836150:three_prime_UTR
GTAGAGTACCAAGCAGCATG+TGG 0.661892 5_4:+9610230 Msa0836150:CDS
AGATAGACATACCTCATATG+GGG 0.667153 5_4:-9614332 None:intergenic
TCGCTAACAAGCTCCAGTCA+CGG 0.670367 5_4:-9614449 None:intergenic
TCACCCACCCAAAGGCACAA+CGG 0.680987 5_4:-9617269 None:intergenic
ATTTCTGCCCTAATGAACCA+AGG 0.686252 5_4:-9617449 None:intergenic
GCTCACAGCAAATTACGTAA+GGG 0.686272 5_4:-9615265 None:intergenic
ATTGCTGTGACAACCACGGG+GGG 0.688758 5_4:-9608241 None:intergenic
GTACAAGAAGAAATGAGGAA+CGG 0.689471 5_4:+9614988 Msa0836150:CDS
TCCGTGCTTACAAGAACATG+TGG 0.705974 5_4:-9615090 None:intergenic
AACAACTGGAGTCTTGCCAG+AGG 0.707117 5_4:+9612233 Msa0836150:CDS
TTGCTGGTGATGATGATGAG+AGG 0.707281 5_4:+9615844 Msa0836150:CDS
AGGGTAATGAGCTCAGCCAG+CGG 0.714806 5_4:-9613450 None:intergenic
ATGAATTGAAACGAGAACAG+GGG 0.730709 5_4:+9615466 Msa0836150:CDS
TTATTGCTGTGACAACCACG+GGG 0.731047 5_4:-9608243 None:intergenic
GTGAATCCACACCAGCAAGG+GGG 0.741409 5_4:+9617365 Msa0836150:three_prime_UTR
TATTGCTGTGACAACCACGG+GGG 0.742494 5_4:-9608242 None:intergenic
TTAAGATGCCCGTTGCAGCG+AGG 0.757926 5_4:-9616744 None:intergenic
ATCTGTGTAGAAGAACATCG+AGG 0.780391 5_4:-9609792 None:intergenic
CTAACAAGCTCCAGTCACGG+CGG 0.808047 5_4:-9614446 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTAAGAATTTTTTTTA+GGG - chr5_4:9609075-9609094 None:intergenic 10.0%
!! AAAACAAAGAATATTTAAAA+AGG - chr5_4:9609953-9609972 None:intergenic 10.0%
!!! CAAAGAAAAATTAAAATTTT+AGG - chr5_4:9612864-9612883 None:intergenic 10.0%
!!! CAATTTTATGAAAAATTAAA+AGG - chr5_4:9614916-9614935 None:intergenic 10.0%
!!! CTTTTAATTTTTCATAAAAT+TGG + chr5_4:9614914-9614933 Msa0836150:intron 10.0%
!! TTCGTAATATATATATAATT+AGG - chr5_4:9615549-9615568 None:intergenic 10.0%
!!! TATAGTTTATTTCTATATAC+AGG + chr5_4:9608092-9608111 Msa0836150:intron 15.0%
!!! TAGATTTGGTATATTTTTAT+TGG + chr5_4:9608619-9608638 Msa0836150:intron 15.0%
!! TAATTAAATTTGTATTCTTC+TGG - chr5_4:9608975-9608994 None:intergenic 15.0%
!!! GATTGTTAAGAATTTTTTTT+AGG - chr5_4:9609076-9609095 None:intergenic 15.0%
!!! TAATTTTTATTCAATGAGAA+AGG - chr5_4:9609872-9609891 None:intergenic 15.0%
!!! AAATATTCTTTGTTTTCAAA+TGG + chr5_4:9609957-9609976 Msa0836150:intron 15.0%
!!! AACTAATTGTTTTGAAAAAT+TGG + chr5_4:9611299-9611318 Msa0836150:intron 15.0%
!!! TTTTTATAGTATTCTTGATT+TGG + chr5_4:9611448-9611467 Msa0836150:intron 15.0%
!! GAACAATATATTTCTTATTA+TGG - chr5_4:9611733-9611752 None:intergenic 15.0%
!! ATAAATATAGTCTATTTCAT+GGG - chr5_4:9613998-9614017 None:intergenic 15.0%
!! AATAAATATAGTCTATTTCA+TGG - chr5_4:9613999-9614018 None:intergenic 15.0%
!! TTATGAAAAATTAAAAGGTA+GGG - chr5_4:9614911-9614930 None:intergenic 15.0%
!! TTTATGAAAAATTAAAAGGT+AGG - chr5_4:9614912-9614931 None:intergenic 15.0%
!! TTTAAATCTATTTGTATGTT+GGG + chr5_4:9616181-9616200 Msa0836150:CDS 15.0%
!! TTAAATTAATAATACCTGAT+TGG - chr5_4:9616323-9616342 None:intergenic 15.0%
!! AATCAGGTATTATTAATTTA+AGG + chr5_4:9616322-9616341 Msa0836150:intron 15.0%
!!! GTATTATTAATTTAAGGTTA+AGG + chr5_4:9616328-9616347 Msa0836150:intron 15.0%
!!! TTTGTTTTAATGTATTATAG+AGG + chr5_4:9616537-9616556 Msa0836150:CDS 15.0%
!! TTATATGATCTATAATAGTT+AGG + chr5_4:9616816-9616835 Msa0836150:intron 15.0%
!! CAAATTCTTTATAAATTTAC+AGG - chr5_4:9617035-9617054 None:intergenic 15.0%
!! TCTGATTAAAAGAAAGATTA+TGG + chr5_4:9607973-9607992 Msa0836150:exon 20.0%
!! CTGATTAAAAGAAAGATTAT+GGG + chr5_4:9607974-9607993 Msa0836150:exon 20.0%
!! TGATTAAAAGAAAGATTATG+GGG + chr5_4:9607975-9607994 Msa0836150:exon 20.0%
!!! TATGTTCTGTTTTTCATTTA+TGG - chr5_4:9608281-9608300 None:intergenic 20.0%
!!! TATATGCAAATCTATTTTTC+AGG + chr5_4:9608450-9608469 Msa0836150:intron 20.0%
!!! AGTTTGAAATTTATGTATGT+AGG - chr5_4:9608589-9608608 None:intergenic 20.0%
!! TTTCATATGTTTAACTATTC+AGG + chr5_4:9608907-9608926 Msa0836150:intron 20.0%
!!! TTAATTTGTTTTAAGCTTCA+AGG - chr5_4:9609201-9609220 None:intergenic 20.0%
!! TACTATATAAGTTGTAGTTA+AGG + chr5_4:9609313-9609332 Msa0836150:intron 20.0%
!! CTGAAACAAAGTAAATAAAT+GGG - chr5_4:9609685-9609704 None:intergenic 20.0%
!! ACTGAAACAAAGTAAATAAA+TGG - chr5_4:9609686-9609705 None:intergenic 20.0%
!! AATAATTTACCTCCTTTAAT+AGG - chr5_4:9610396-9610415 None:intergenic 20.0%
!!! AATCTAAGTTGATTAAGTAA+GGG + chr5_4:9611268-9611287 Msa0836150:intron 20.0%
!! TGATCATAAGAAAAACAAAA+AGG + chr5_4:9611883-9611902 Msa0836150:CDS 20.0%
!! TGATAAATACATATTACTTC+TGG + chr5_4:9611955-9611974 Msa0836150:CDS 20.0%
!!! CTAAAATCATTTTGTGTTAT+AGG + chr5_4:9612287-9612306 Msa0836150:intron 20.0%
!!! ATTTGAAATACCACAAAATT+AGG + chr5_4:9612558-9612577 Msa0836150:intron 20.0%
!! TCCTTGAATATTTATTTGAA+AGG + chr5_4:9613000-9613019 Msa0836150:intron 20.0%
!! TCCTTTCAAATAAATATTCA+AGG - chr5_4:9613004-9613023 None:intergenic 20.0%
!! TTATTTGAAAGGATTTACAT+CGG + chr5_4:9613011-9613030 Msa0836150:intron 20.0%
!!! TAACATTTTTTTATTGCAGA+AGG - chr5_4:9613369-9613388 None:intergenic 20.0%
!! TCTGCAATAAAAAAATGTTA+TGG + chr5_4:9613369-9613388 Msa0836150:intron 20.0%
!!! TTTTGCATAAAATCTTGAAT+TGG - chr5_4:9613430-9613449 None:intergenic 20.0%
!! TCAAAATAACTTGAATTTAG+AGG + chr5_4:9613623-9613642 Msa0836150:CDS 20.0%
!! TAAATATAGTCTATTTCATG+GGG - chr5_4:9613997-9614016 None:intergenic 20.0%
!!! TTTGCTATTACAGATAATTT+TGG + chr5_4:9614099-9614118 Msa0836150:intron 20.0%
!! ATTAGGTCAATAAGAAATAT+CGG + chr5_4:9614215-9614234 Msa0836150:intron 20.0%
!!! TTTAAAATTCTCCAATCATA+TGG - chr5_4:9614701-9614720 None:intergenic 20.0%
!!! ATATGATTGGAGAATTTTAA+AGG + chr5_4:9614700-9614719 Msa0836150:intron 20.0%
!! TTGGTCTAATTATTAATCAT+AGG + chr5_4:9614840-9614859 Msa0836150:intron 20.0%
!! TAATTATTAATCATAGGAGA+AGG + chr5_4:9614846-9614865 Msa0836150:intron 20.0%
!! AGTTATCTTGATTAACATAT+AGG + chr5_4:9615184-9615203 Msa0836150:intron 20.0%
!! ATAAATACAAAGCAAAACTT+TGG - chr5_4:9615375-9615394 None:intergenic 20.0%
!! TATTATTATGTTCTTTGAGT+AGG + chr5_4:9615392-9615411 Msa0836150:intron 20.0%
!! ATTATTATGTTCTTTGAGTA+GGG + chr5_4:9615393-9615412 Msa0836150:intron 20.0%
!!! ATAACAACTAACAGAAATTT+TGG - chr5_4:9615882-9615901 None:intergenic 20.0%
!! GATGATATAAAATTAAATGC+AGG + chr5_4:9616089-9616108 Msa0836150:intron 20.0%
!! ATACAAATAGATTTAAACAC+AGG - chr5_4:9616178-9616197 None:intergenic 20.0%
!! GTTTAAATCTATTTGTATGT+TGG + chr5_4:9616180-9616199 Msa0836150:CDS 20.0%
!!! TACTGTTTGTTATATAGAAA+AGG + chr5_4:9616947-9616966 Msa0836150:CDS 20.0%
!! CAAATATTTGTATTGTTCTA+TGG - chr5_4:9617502-9617521 None:intergenic 20.0%
!!! AAAAATTTCATCTTCACTTT+TGG + chr5_4:9617576-9617595 Msa0836150:three_prime_UTR 20.0%
! TACGTAACTTATAATAGATG+TGG - chr5_4:9608067-9608086 None:intergenic 25.0%
! CTAAGACTTCAAAAAAGAAA+AGG - chr5_4:9608121-9608140 None:intergenic 25.0%
!! AAATATCTATGAAAAAGTGC+TGG - chr5_4:9608429-9608448 None:intergenic 25.0%
! AAAGAAATAGCATATAGAAG+TGG - chr5_4:9608544-9608563 None:intergenic 25.0%
! AAATTTATGTATGTAGGTCT+CGG - chr5_4:9608583-9608602 None:intergenic 25.0%
! AACTCAGATTTGAATAGATT+TGG + chr5_4:9608605-9608624 Msa0836150:intron 25.0%
! TTAACTGAATAAGAGATTGT+GGG - chr5_4:9608720-9608739 None:intergenic 25.0%
! ATTAACTGAATAAGAGATTG+TGG - chr5_4:9608721-9608740 None:intergenic 25.0%
! AATCTCTTATTCAGTTAATG+TGG + chr5_4:9608722-9608741 Msa0836150:intron 25.0%
! ATGAGATTAAATTGAGTCAA+TGG - chr5_4:9608748-9608767 None:intergenic 25.0%
! TTAACTGAATAAGAGATTGT+GGG - chr5_4:9608720-9608739 None:intergenic 25.0%
! ATTAACTGAATAAGAGATTG+TGG - chr5_4:9608721-9608740 None:intergenic 25.0%
! AATCTCTTATTCAGTTAATG+TGG + chr5_4:9608722-9608741 Msa0836150:intron 25.0%
! ATGAGATTAAATTGAGTCAA+TGG - chr5_4:9608748-9608767 None:intergenic 25.0%
! CTTACAACAAACAATAATAC+TGG - chr5_4:9608938-9608957 None:intergenic 25.0%
!!! CAGTATTATTGTTTGTTGTA+AGG + chr5_4:9608936-9608955 Msa0836150:intron 25.0%
! TCATAAATTCCAACATATTG+TGG - chr5_4:9609013-9609032 None:intergenic 25.0%
! TTTACACACAGAATCTTTAA+AGG - chr5_4:9609239-9609258 None:intergenic 25.0%
! TTTGCGAATAACAGTAAAAT+GGG - chr5_4:9609431-9609450 None:intergenic 25.0%
! AGCATAGTATTTGAATTCTA+AGG - chr5_4:9609607-9609626 None:intergenic 25.0%
! AATGTTACAATTACACAAGA+TGG + chr5_4:9609729-9609748 Msa0836150:CDS 25.0%
! AATGAGAAAGGTCATATAAT+TGG - chr5_4:9609860-9609879 None:intergenic 25.0%
!! TTAACTGAATTTTGTCTGAA+AGG + chr5_4:9609889-9609908 Msa0836150:intron 25.0%
!! ATATCTTGATGATAAACAGT+TGG + chr5_4:9609983-9610002 Msa0836150:intron 25.0%
!!! CAAGTTTTTATTTGGCTTTA+AGG - chr5_4:9610201-9610220 None:intergenic 25.0%
!!! AACATTTTTGGAACTTCATT+TGG - chr5_4:9610742-9610761 None:intergenic 25.0%
! ACATTATGCAGTATTAAACT+TGG + chr5_4:9610922-9610941 Msa0836150:intron 25.0%
! CATTATGCAGTATTAAACTT+GGG + chr5_4:9610923-9610942 Msa0836150:intron 25.0%
! AACAATGAAATGCTAATCAT+TGG - chr5_4:9610957-9610976 None:intergenic 25.0%
! TGATTAGCATTTCATTGTTA+TGG + chr5_4:9610958-9610977 Msa0836150:intron 25.0%
! ATCTAGATACATTATGCAAT+AGG + chr5_4:9611016-9611035 Msa0836150:intron 25.0%
! CACCAATAGATATAAAAGTA+TGG + chr5_4:9611042-9611061 Msa0836150:intron 25.0%
!! TGCCATACTTTTATATCTAT+TGG - chr5_4:9611047-9611066 None:intergenic 25.0%
! GTTTCAACAACTTAAATAGT+TGG - chr5_4:9611175-9611194 None:intergenic 25.0%
!!! GAATCTAAGTTGATTAAGTA+AGG + chr5_4:9611267-9611286 Msa0836150:intron 25.0%
! GATCAATAAAGTATGTCAAA+TGG - chr5_4:9611349-9611368 None:intergenic 25.0%
! TCAAGAATACTATAAAAACC+AGG - chr5_4:9611446-9611465 None:intergenic 25.0%
!!! ATTTATTTGCTGGCTTAATT+TGG + chr5_4:9611610-9611629 Msa0836150:intron 25.0%
!! ATCTACTGTTTTCTATTTCA+GGG + chr5_4:9611665-9611684 Msa0836150:intron 25.0%
! AATATTATCAACCTGAATGA+TGG - chr5_4:9612002-9612021 None:intergenic 25.0%
! TAAAATAGACAAAATGCCAA+AGG - chr5_4:9612066-9612085 None:intergenic 25.0%
!! TTTGATTTAGCATTGGATTT+AGG + chr5_4:9612370-9612389 Msa0836150:intron 25.0%
!!! AGATTTACAGTTTTGTTGTT+TGG + chr5_4:9612433-9612452 Msa0836150:intron 25.0%
! AAATACCACAAAATTAGGAA+AGG + chr5_4:9612563-9612582 Msa0836150:intron 25.0%
! GTTACAATGAAGCTAATAAA+AGG + chr5_4:9612610-9612629 Msa0836150:intron 25.0%
! CGTTATAAATAATCTTTCTC+TGG - chr5_4:9612650-9612669 None:intergenic 25.0%
!!! TTTACTATTTTCTAGTACCA+TGG + chr5_4:9612680-9612699 Msa0836150:intron 25.0%
!!! ATGTTTTTTTTGCATCGAAA+TGG + chr5_4:9612706-9612725 Msa0836150:intron 25.0%
!!! TGTTTTTTTTGCATCGAAAT+GGG + chr5_4:9612707-9612726 Msa0836150:intron 25.0%
!! ATTCTGACAGAATTCTAAAA+TGG - chr5_4:9612937-9612956 None:intergenic 25.0%
! GATACTTTGTAACCTATATA+TGG + chr5_4:9613087-9613106 Msa0836150:intron 25.0%
! GAAAGAAAATCACCATATAT+AGG - chr5_4:9613102-9613121 None:intergenic 25.0%
! TAATTATTGTACTGTCTTGT+AGG + chr5_4:9613739-9613758 Msa0836150:intron 25.0%
! ATTCAATAATGGTTTACAGT+GGG + chr5_4:9613780-9613799 Msa0836150:CDS 25.0%
! ATCTAAGAAAGTTATTCAAG+AGG + chr5_4:9613832-9613851 Msa0836150:CDS 25.0%
! AAATATAGTCTATTTCATGG+GGG - chr5_4:9613996-9614015 None:intergenic 25.0%
! CAAAAACGAAAACTACAATA+AGG - chr5_4:9614161-9614180 None:intergenic 25.0%
!!! TTCTCCTTTAATTTGTCATT+AGG + chr5_4:9614198-9614217 Msa0836150:intron 25.0%
! TTGACCTAATGACAAATTAA+AGG - chr5_4:9614205-9614224 None:intergenic 25.0%
! GCAATATTTACTCATTTATG+TGG + chr5_4:9614550-9614569 Msa0836150:intron 25.0%
! TATGTGGTAACTTAATATTG+CGG + chr5_4:9614566-9614585 Msa0836150:intron 25.0%
! ATAATAACCTACCATATGAT+TGG + chr5_4:9614687-9614706 Msa0836150:intron 25.0%
! AAGAAACTTCTTGTATCTTT+GGG + chr5_4:9614723-9614742 Msa0836150:intron 25.0%
! ATGACAAATCCAATCAAATT+TGG - chr5_4:9614799-9614818 None:intergenic 25.0%
! TTTCATAAAATTGGAGTATG+AGG + chr5_4:9614923-9614942 Msa0836150:intron 25.0%
! GTATTAAAACTAGCATTCAA+TGG - chr5_4:9614966-9614985 None:intergenic 25.0%
!!! TTGAATGCTAGTTTTAATAC+AGG + chr5_4:9614966-9614985 Msa0836150:intron 25.0%
! TATCTTGATTAACATATAGG+TGG + chr5_4:9615187-9615206 Msa0836150:intron 25.0%
! AACATATTTCAAAGTTATCC+CGG - chr5_4:9615326-9615345 None:intergenic 25.0%
!!! AACTTTGAAATATGTTGCAT+CGG + chr5_4:9615330-9615349 Msa0836150:intron 25.0%
!!! TACTACTTAGCTATTTTTTG+TGG + chr5_4:9615946-9615965 Msa0836150:intron 25.0%
! CTCTAGCTGTAAATAATTAA+CGG + chr5_4:9616062-9616081 Msa0836150:intron 25.0%
! TAAAATTAAATGCAGGTATC+AGG + chr5_4:9616096-9616115 Msa0836150:intron 25.0%
! AAAATTAAATGCAGGTATCA+GGG + chr5_4:9616097-9616116 Msa0836150:intron 25.0%
! AAATAGATTTAAACACAGGA+GGG - chr5_4:9616174-9616193 None:intergenic 25.0%
! AAAAGCTGTTCATATTTAAC+AGG - chr5_4:9616792-9616811 None:intergenic 25.0%
!!! ATAGTTAGGTTTTAATGCTT+TGG + chr5_4:9616830-9616849 Msa0836150:intron 25.0%
! ATCAACAATACAAAAGATCA+GGG + chr5_4:9617245-9617264 Msa0836150:CDS 25.0%
! TTATATCAACTACTTTGACA+TGG - chr5_4:9617542-9617561 None:intergenic 25.0%
AAAGTAAAATCTCACCCTTT+GGG - chr5_4:9608044-9608063 None:intergenic 30.0%
AGACTTCAAAAAAGAAAAGG+AGG - chr5_4:9608118-9608137 None:intergenic 30.0%
!! GTTCTGTTTTTCATTTATGG+TGG - chr5_4:9608278-9608297 None:intergenic 30.0%
!!! TGCAAATCTATTTTTCAGGA+AGG + chr5_4:9608454-9608473 Msa0836150:intron 30.0%
!! TATGCTTCTTGAGTTTGTTA+TGG + chr5_4:9608493-9608512 Msa0836150:intron 30.0%
!! TTATTGGTAATGATGCATAC+TGG + chr5_4:9608635-9608654 Msa0836150:intron 30.0%
!! TATTGGTAATGATGCATACT+GGG + chr5_4:9608636-9608655 Msa0836150:intron 30.0%
! CTTGTTGTAACATGAACTTA+TGG + chr5_4:9608847-9608866 Msa0836150:intron 30.0%
AAATTCCAACATATTGTGGA+AGG - chr5_4:9609009-9609028 None:intergenic 30.0%
TCTAAAAAGTCAAACAGGAA+AGG - chr5_4:9609360-9609379 None:intergenic 30.0%
GTCAATCTAAAAAGTCAAAC+AGG - chr5_4:9609365-9609384 None:intergenic 30.0%
GTTTGCGAATAACAGTAAAA+TGG - chr5_4:9609432-9609451 None:intergenic 30.0%
TGATGGGAATATATTTCCAA+TGG + chr5_4:9609453-9609472 Msa0836150:CDS 30.0%
GATGGGAATATATTTCCAAT+GGG + chr5_4:9609454-9609473 Msa0836150:CDS 30.0%
ATTTCCAATGGGATTCAATA+AGG + chr5_4:9609465-9609484 Msa0836150:CDS 30.0%
CTTGTTGGACATAATATTTC+TGG + chr5_4:9609763-9609782 Msa0836150:CDS 30.0%
! AACAGTTGGTTCAAATTGTT+TGG + chr5_4:9609997-9610016 Msa0836150:intron 30.0%
!! AAAGGTTATGATGGATATAC+CGG + chr5_4:9610056-9610075 Msa0836150:intron 30.0%
TTGCAGTGTAAAATGAAAGT+TGG - chr5_4:9610165-9610184 None:intergenic 30.0%
! GGTAAATTATTTGTTGAGAG+AGG + chr5_4:9610405-9610424 Msa0836150:intron 30.0%
TCTAACACTCACACAATTAT+TGG + chr5_4:9610458-9610477 Msa0836150:intron 30.0%
CTAACACTCACACAATTATT+GGG + chr5_4:9610459-9610478 Msa0836150:intron 30.0%
ATTATTGGGTGAAATCAATG+TGG + chr5_4:9610473-9610492 Msa0836150:intron 30.0%
TTATTGGGTGAAATCAATGT+GGG + chr5_4:9610474-9610493 Msa0836150:intron 30.0%
ATAAAGTGGTGAGATTCATA+TGG + chr5_4:9610523-9610542 Msa0836150:intron 30.0%
TCTAACAATCCCTCATTTAT+GGG - chr5_4:9610556-9610575 None:intergenic 30.0%
TTCTTACTAACTACCTTCAT+TGG + chr5_4:9610644-9610663 Msa0836150:intron 30.0%
!! TTTGCAGTTTGGAACATTTT+TGG - chr5_4:9610754-9610773 None:intergenic 30.0%
AGGAAAGATAAAACTGTTCT+GGG - chr5_4:9610807-9610826 None:intergenic 30.0%
AAGGAAAGATAAAACTGTTC+TGG - chr5_4:9610808-9610827 None:intergenic 30.0%
CTTTGTACTATTGTTGATGT+CGG + chr5_4:9611112-9611131 Msa0836150:intron 30.0%
GTTGAAACTTCAAAGTGATA+AGG + chr5_4:9611187-9611206 Msa0836150:intron 30.0%
!! TGATTTGGTCAGATTGAATA+TGG + chr5_4:9611463-9611482 Msa0836150:intron 30.0%
! GATTTGGTCAGATTGAATAT+GGG + chr5_4:9611464-9611483 Msa0836150:intron 30.0%
ATTTGGTCAGATTGAATATG+GGG + chr5_4:9611465-9611484 Msa0836150:intron 30.0%
! CATCTACTGTTTTCTATTTC+AGG + chr5_4:9611664-9611683 Msa0836150:intron 30.0%
TTATCATATAGACCCTTCTT+TGG - chr5_4:9611941-9611960 None:intergenic 30.0%
ATCCAATGCTAAATCAAACA+CGG - chr5_4:9612368-9612387 None:intergenic 30.0%
ACAAATTCTCACTAAAAAGC+TGG - chr5_4:9612526-9612545 None:intergenic 30.0%
TAGCTTCATTGTAACAATCA+TGG - chr5_4:9612605-9612624 None:intergenic 30.0%
ATTCTCTACTTGAAATAGTG+AGG - chr5_4:9612761-9612780 None:intergenic 30.0%
!! TGTCTTTCTTTGTTTCTATC+TGG - chr5_4:9612793-9612812 None:intergenic 30.0%
AAACAAAGAAAGACACTTCA+GGG + chr5_4:9612798-9612817 Msa0836150:intron 30.0%
TTGATTACATTGACCAAGAA+TGG + chr5_4:9612966-9612985 Msa0836150:intron 30.0%
AAACCAAGATAAAAACCTGT+TGG - chr5_4:9613300-9613319 None:intergenic 30.0%
! AATCGTTAATTTTGAGCACT+CGG - chr5_4:9613339-9613358 None:intergenic 30.0%
GCATATTCTTCTTACTTGTA+GGG - chr5_4:9613472-9613491 None:intergenic 30.0%
AGCATATTCTTCTTACTTGT+AGG - chr5_4:9613473-9613492 None:intergenic 30.0%
TACAAGTAAGAAGAATATGC+TGG + chr5_4:9613472-9613491 Msa0836150:intron 30.0%
! ACGATTTTATTATGTACACG+AGG + chr5_4:9613679-9613698 Msa0836150:intron 30.0%
!! TGGTGATACTGATTCAATAA+TGG + chr5_4:9613769-9613788 Msa0836150:CDS 30.0%
GATTCAATAATGGTTTACAG+TGG + chr5_4:9613779-9613798 Msa0836150:CDS 30.0%
AGTTCATCATATAGGTTCAA+AGG - chr5_4:9613887-9613906 None:intergenic 30.0%
TGCAAAAGAAAAGAAAGTTG+AGG - chr5_4:9613933-9613952 None:intergenic 30.0%
AATATAGTCTATTTCATGGG+GGG - chr5_4:9613995-9614014 None:intergenic 30.0%
TGCTTAGAAATTGATCTTGA+TGG + chr5_4:9614238-9614257 Msa0836150:CDS 30.0%
! ATCTTGATGGTTTGTATAAG+AGG + chr5_4:9614251-9614270 Msa0836150:CDS 30.0%
AAAGAAATATGCAGCTGTTA+AGG + chr5_4:9614291-9614310 Msa0836150:CDS 30.0%
AAGATAGACATACCTCATAT+GGG - chr5_4:9614336-9614355 None:intergenic 30.0%
TAAGATAGACATACCTCATA+TGG - chr5_4:9614337-9614356 None:intergenic 30.0%
! TTGCTTGACTCAAATTTTGT+CGG + chr5_4:9614488-9614507 Msa0836150:CDS 30.0%
AAATTCTCCAATCATATGGT+AGG - chr5_4:9614697-9614716 None:intergenic 30.0%
GAAGAAACTTCTTGTATCTT+TGG + chr5_4:9614722-9614741 Msa0836150:intron 30.0%
TCAAATTTGGATATGCATCA+AGG - chr5_4:9614786-9614805 None:intergenic 30.0%
GATGCATATCCAAATTTGAT+TGG + chr5_4:9614787-9614806 Msa0836150:intron 30.0%
TTGATTGGATTTGTCATTAG+CGG + chr5_4:9614802-9614821 Msa0836150:intron 30.0%
TAAAACTAGCATTCAATGGT+TGG - chr5_4:9614962-9614981 None:intergenic 30.0%
!! ACTTTGAAATATGTTGCATC+GGG + chr5_4:9615331-9615350 Msa0836150:intron 30.0%
TGATTACTATTTGTCACAAC+AGG + chr5_4:9615506-9615525 Msa0836150:CDS 30.0%
! TATCAACTGTTCTTTTGCAT+TGG + chr5_4:9615760-9615779 Msa0836150:intron 30.0%
AACATAAATCAAGTGAAGCA+AGG + chr5_4:9615796-9615815 Msa0836150:CDS 30.0%
ACATAAATCAAGTGAAGCAA+GGG + chr5_4:9615797-9615816 Msa0836150:CDS 30.0%
!! ATGATGTTAATTTTGACACG+AGG + chr5_4:9615900-9615919 Msa0836150:intron 30.0%
!!! TACTTAGCTATTTTTTGTGG+AGG + chr5_4:9615949-9615968 Msa0836150:intron 30.0%
! TCCAGTTTCATTTTGAATAC+AGG + chr5_4:9616036-9616055 Msa0836150:intron 30.0%
ACCTGTATTCAAAATGAAAC+TGG - chr5_4:9616040-9616059 None:intergenic 30.0%
! GCTGTAAATAATTAACGGAT+TGG + chr5_4:9616067-9616086 Msa0836150:intron 30.0%
CAAATAGATTTAAACACAGG+AGG - chr5_4:9616175-9616194 None:intergenic 30.0%
!! ACACCATTTTCAAAGCATTT+GGG - chr5_4:9616274-9616293 None:intergenic 30.0%
!! AACACCATTTTCAAAGCATT+TGG - chr5_4:9616275-9616294 None:intergenic 30.0%
!! AAATGCTTTGAAAATGGTGT+TGG + chr5_4:9616274-9616293 Msa0836150:CDS 30.0%
!! ATTCACAATATGCTTTAGAG+AGG - chr5_4:9616581-9616600 None:intergenic 30.0%
GTTCATATTTAACAGGTTTG+TGG - chr5_4:9616785-9616804 None:intergenic 30.0%
! ATATAGAAAAGGTATGTCAC+TGG + chr5_4:9616958-9616977 Msa0836150:intron 30.0%
! TATAGAAAAGGTATGTCACT+GGG + chr5_4:9616959-9616978 Msa0836150:intron 30.0%
TAAATTTACAGGTTTACGTC+AGG - chr5_4:9617024-9617043 None:intergenic 30.0%
!! CATGTTTTTATTACACCAGA+TGG + chr5_4:9617155-9617174 Msa0836150:intron 30.0%
CATCAACAATACAAAAGATC+AGG + chr5_4:9617244-9617263 Msa0836150:CDS 30.0%
GTTGTTGCAATTTAAATTGC+AGG + chr5_4:9617306-9617325 Msa0836150:exon 30.0%
! TTTGAAACTTGTAGCCATGA+AGG - chr5_4:9608001-9608020 None:intergenic 35.0%
GAAAGTAAAATCTCACCCTT+TGG - chr5_4:9608045-9608064 None:intergenic 35.0%
GAAGAATTCCTGATGTCTTT+AGG - chr5_4:9608199-9608218 None:intergenic 35.0%
ATCTGTTGTCAGTTGCAATA+TGG + chr5_4:9608318-9608337 Msa0836150:CDS 35.0%
TGTCAGTTGCAATATGGTTA+AGG + chr5_4:9608324-9608343 Msa0836150:CDS 35.0%
! CAATGCACTTTGAGAAATGA+TGG - chr5_4:9608387-9608406 None:intergenic 35.0%
GTTGTTAGTGAACACTAGTT+TGG - chr5_4:9608673-9608692 None:intergenic 35.0%
!! ACTACAAAGCTTTAAGCTTC+AGG + chr5_4:9608871-9608890 Msa0836150:intron 35.0%
TTGAACCTTCCACAATATGT+TGG + chr5_4:9609001-9609020 Msa0836150:intron 35.0%
CTGCTTAAGAGTCAAATAGT+TGG + chr5_4:9609106-9609125 Msa0836150:intron 35.0%
TAGCTGATACAATATGCACT+AGG + chr5_4:9609156-9609175 Msa0836150:intron 35.0%
ACTGTTATTCGCAAACTTGA+TGG + chr5_4:9609436-9609455 Msa0836150:CDS 35.0%
CTGTTATTCGCAAACTTGAT+GGG + chr5_4:9609437-9609456 Msa0836150:CDS 35.0%
GTAAATAAATGGGTCAATCC+TGG - chr5_4:9609675-9609694 None:intergenic 35.0%
TGGTTCAAATTGTTTGGACT+AGG + chr5_4:9610003-9610022 Msa0836150:intron 35.0%
TGAAAATCACGTAAGACGAA+AGG + chr5_4:9610038-9610057 Msa0836150:intron 35.0%
TATTCAATTAGCTACCTTGC+CGG - chr5_4:9610078-9610097 None:intergenic 35.0%
AGCCAAATAAAAACTTGTGC+AGG + chr5_4:9610204-9610223 Msa0836150:intron 35.0%
! AGCCTGCACAAGTTTTTATT+TGG - chr5_4:9610209-9610228 None:intergenic 35.0%
GATAGAAGAGGCAAAACATT+TGG + chr5_4:9610295-9610314 Msa0836150:CDS 35.0%
!! AGAGGCAAAACATTTGGTTT+TGG + chr5_4:9610301-9610320 Msa0836150:CDS 35.0%
ATGTTCTCGTGACCTATTAA+AGG + chr5_4:9610381-9610400 Msa0836150:CDS 35.0%
! AAAATGGGTTCCACATAAAG+TGG + chr5_4:9610509-9610528 Msa0836150:intron 35.0%
ATGAATCTCACCACTTTATG+TGG - chr5_4:9610522-9610541 None:intergenic 35.0%
TGGATTTCATCCCATAAATG+AGG + chr5_4:9610543-9610562 Msa0836150:intron 35.0%
GGATTTCATCCCATAAATGA+GGG + chr5_4:9610544-9610563 Msa0836150:intron 35.0%
CTCTAACAATCCCTCATTTA+TGG - chr5_4:9610557-9610576 None:intergenic 35.0%
GAGTTAAAGAATAGCTAACC+TGG - chr5_4:9610675-9610694 None:intergenic 35.0%
! TAAAAGTATGGCAGTTGTCA+TGG + chr5_4:9611054-9611073 Msa0836150:intron 35.0%
!! CAGAAGCATTATCAAGTTCA+AGG - chr5_4:9611151-9611170 None:intergenic 35.0%
!! CTTGAACTTGATAATGCTTC+TGG + chr5_4:9611149-9611168 Msa0836150:intron 35.0%
ACTTCAAAGTGATAAGGTGT+TGG + chr5_4:9611193-9611212 Msa0836150:intron 35.0%
AATCATCTTTGCTTCTATCC+TGG + chr5_4:9611425-9611444 Msa0836150:intron 35.0%
TCAGATTGAATATGGGGAAA+CGG + chr5_4:9611471-9611490 Msa0836150:intron 35.0%
GAATATAAGTGGCAACCTAT+GGG + chr5_4:9611558-9611577 Msa0836150:CDS 35.0%
AATATAAGTGGCAACCTATG+GGG + chr5_4:9611559-9611578 Msa0836150:CDS 35.0%
ATTATACACGATGTAGCAGT+TGG + chr5_4:9611634-9611653 Msa0836150:intron 35.0%
GCGTAATTAGAAAACTTGTC+TGG - chr5_4:9611755-9611774 None:intergenic 35.0%
GACGATGCAGATATTAATGA+TGG + chr5_4:9611833-9611852 Msa0836150:CDS 35.0%
! TATCAACCTGAATGATGGAA+GGG - chr5_4:9611997-9612016 None:intergenic 35.0%
! TTATCAACCTGAATGATGGA+AGG - chr5_4:9611998-9612017 None:intergenic 35.0%
TCTCTTTCAAAATGTGCTTC+TGG + chr5_4:9612021-9612040 Msa0836150:intron 35.0%
CACCTCTATGGTGTAATTTA+TGG + chr5_4:9612101-9612120 Msa0836150:intron 35.0%
TGCCATAAATTACACCATAG+AGG - chr5_4:9612106-9612125 None:intergenic 35.0%
ACTGTTGAAAGATCTTCAGA+TGG + chr5_4:9612183-9612202 Msa0836150:CDS 35.0%
!! ACTCCAGTTGTTTTACTAGA+TGG - chr5_4:9612225-9612244 None:intergenic 35.0%
CTAAATCAAACACGGTAACA+CGG - chr5_4:9612360-9612379 None:intergenic 35.0%
! TACCGTGTTTGATTTAGCAT+TGG + chr5_4:9612363-9612382 Msa0836150:intron 35.0%
AGTATCTTGTGTTTCGTGTT+AGG + chr5_4:9612397-9612416 Msa0836150:intron 35.0%
! CGAATCCTTTCCTAATTTTG+TGG - chr5_4:9612571-9612590 None:intergenic 35.0%
!! ACTATTTTCTAGTACCATGG+TGG + chr5_4:9612683-9612702 Msa0836150:intron 35.0%
TGCAAAAAAAACATCCACCA+TGG - chr5_4:9612700-9612719 None:intergenic 35.0%
GAAACAAAGAAAGACACTTC+AGG + chr5_4:9612797-9612816 Msa0836150:intron 35.0%
AGGGTATAGCACTATAAGTA+AGG + chr5_4:9612817-9612836 Msa0836150:intron 35.0%
TTGGTCAATGTAATCAACAG+AGG - chr5_4:9612963-9612982 None:intergenic 35.0%
TGCTGAAAAAACTGGTTATG+TGG + chr5_4:9613186-9613205 Msa0836150:CDS 35.0%
TGAAAAAACTGGTTATGTGG+AGG + chr5_4:9613189-9613208 Msa0836150:CDS 35.0%
ATCTTGAATTGGAAAATCCC+AGG - chr5_4:9613419-9613438 None:intergenic 35.0%
! AAGATTTTATGCAAAACCGC+TGG + chr5_4:9613434-9613453 Msa0836150:CDS 35.0%
! GTATGGTAATGAGTAATGAC+TGG - chr5_4:9613513-9613532 None:intergenic 35.0%
CTGAGACTATATTGAGAGTA+TGG - chr5_4:9613530-9613549 None:intergenic 35.0%
TTCCATGTTTGATGTCATAC+AGG + chr5_4:9613566-9613585 Msa0836150:intron 35.0%
TCCATGTTTGATGTCATACA+GGG + chr5_4:9613567-9613586 Msa0836150:intron 35.0%
ATATAGTCTATTTCATGGGG+GGG - chr5_4:9613994-9614013 None:intergenic 35.0%
GTTAAGGTGCAGTTTAAAGA+TGG + chr5_4:9614307-9614326 Msa0836150:CDS 35.0%
AGATAGACATACCTCATATG+GGG - chr5_4:9614335-9614354 None:intergenic 35.0%
!! TTTTAGAAGAACATGCCAGT+AGG + chr5_4:9614377-9614396 Msa0836150:intron 35.0%
ATGCCAGTAGGATTAACATA+TGG + chr5_4:9614389-9614408 Msa0836150:intron 35.0%
!! AGCTTGTTAGCGAAAGATTT+AGG + chr5_4:9614459-9614478 Msa0836150:CDS 35.0%
! TGCTTGACTCAAATTTTGTC+GGG + chr5_4:9614489-9614508 Msa0836150:CDS 35.0%
AATTCACAACTCTCTCATGA+AGG + chr5_4:9614628-9614647 Msa0836150:CDS 35.0%
TACAGGTACAAGAAGAAATG+AGG + chr5_4:9614983-9615002 Msa0836150:intron 35.0%
GTACAAGAAGAAATGAGGAA+CGG + chr5_4:9614988-9615007 Msa0836150:CDS 35.0%
GCTCTCAATCAAAATACAAC+CGG + chr5_4:9615304-9615323 Msa0836150:intron 35.0%
CTCTCAATCAAAATACAACC+GGG + chr5_4:9615305-9615324 Msa0836150:intron 35.0%
ATTATGTTCTTTGAGTAGGG+CGG + chr5_4:9615396-9615415 Msa0836150:intron 35.0%
TGTTCTCGTTTCAATTCATC+CGG - chr5_4:9615465-9615484 None:intergenic 35.0%
GATGAATTGAAACGAGAACA+GGG + chr5_4:9615465-9615484 Msa0836150:CDS 35.0%
ATGAATTGAAACGAGAACAG+GGG + chr5_4:9615466-9615485 Msa0836150:CDS 35.0%
TAATTAGGTACTAAACCGCA+AGG - chr5_4:9615534-9615553 None:intergenic 35.0%
! AAAGACTGGCTGATTGTTTA+GGG + chr5_4:9615664-9615683 Msa0836150:CDS 35.0%
GACACATCAAAGGTAAAACT+TGG + chr5_4:9615690-9615709 Msa0836150:intron 35.0%
GCAAATAAAAGTGAGCTTGT+AGG - chr5_4:9615828-9615847 None:intergenic 35.0%
!! ACAAGCTCACTTTTATTTGC+TGG + chr5_4:9615828-9615847 Msa0836150:CDS 35.0%
AGGAATCTGACTACAATTTC+TGG + chr5_4:9616233-9616252 Msa0836150:CDS 35.0%
!! TGTCCCAAATGCTTTGAAAA+TGG + chr5_4:9616268-9616287 Msa0836150:CDS 35.0%
AAACCTTCATATGGCTGAAA+TGG - chr5_4:9616378-9616397 None:intergenic 35.0%
TCAGCGTAAAAACCTTCATA+TGG - chr5_4:9616387-9616406 None:intergenic 35.0%
TTTACGCTGATATCAGATCA+TGG + chr5_4:9616397-9616416 Msa0836150:intron 35.0%
! ACAGCAACATCTAATTTTGC+AGG - chr5_4:9616612-9616631 None:intergenic 35.0%
!! GATTTTTCAGTACACTGAAG+CGG + chr5_4:9616884-9616903 Msa0836150:intron 35.0%
! GTTTTTATTACACCAGATGG+AGG + chr5_4:9617158-9617177 Msa0836150:intron 35.0%
TTGATCAACTCCTTCTCTAT+CGG - chr5_4:9617198-9617217 None:intergenic 35.0%
! AGAAGGAGTTGATCAAAATC+AGG + chr5_4:9617202-9617221 Msa0836150:CDS 35.0%
TCAACTACTTTGACATGGTT+TGG - chr5_4:9617537-9617556 None:intergenic 35.0%
! TAGCAGCTTCTTTTGCTTAC+AGG + chr5_4:9608138-9608157 Msa0836150:intron 40.0%
! TCTTTTGCTTACAGGTTAGC+TGG + chr5_4:9608146-9608165 Msa0836150:intron 40.0%
TTTATTGCTGTGACAACCAC+GGG - chr5_4:9608247-9608266 None:intergenic 40.0%
GTTTATTGCTGTGACAACCA+CGG - chr5_4:9608248-9608267 None:intergenic 40.0%
TCAAACAGGAAAGGTTACTG+TGG - chr5_4:9609351-9609370 None:intergenic 40.0%
TTAGATTGACACTCCTATGC+TGG + chr5_4:9609375-9609394 Msa0836150:intron 40.0%
TCCAATGGGATTCAATAAGG+AGG + chr5_4:9609468-9609487 Msa0836150:CDS 40.0%
ACCTCCTTATTGAATCCCAT+TGG - chr5_4:9609472-9609491 None:intergenic 40.0%
ACGGACAGAAACATAAAAGC+TGG + chr5_4:9609493-9609512 Msa0836150:CDS 40.0%
CGGACAGAAACATAAAAGCT+GGG + chr5_4:9609494-9609513 Msa0836150:CDS 40.0%
ATGTTCTGTGTGTTGAAAGC+AGG + chr5_4:9609521-9609540 Msa0836150:CDS 40.0%
! TGAATTCTAAGGACGACATG+TGG - chr5_4:9609596-9609615 None:intergenic 40.0%
AATACCATATGCTTGCTTCC+AGG + chr5_4:9609654-9609673 Msa0836150:intron 40.0%
ATCTGTGTAGAAGAACATCG+AGG - chr5_4:9609795-9609814 None:intergenic 40.0%
TGTTCTTCTACACAGATCTC+AGG + chr5_4:9609798-9609817 Msa0836150:CDS 40.0%
ACAGATCTCAGGTAGGAATT+TGG + chr5_4:9609809-9609828 Msa0836150:intron 40.0%
CGTAAGACGAAAGGTTATGA+TGG + chr5_4:9610047-9610066 Msa0836150:intron 40.0%
!! TTATGATGGATATACCGGCA+AGG + chr5_4:9610061-9610080 Msa0836150:intron 40.0%
TTCTCGTGACCTATTAAAGG+AGG + chr5_4:9610384-9610403 Msa0836150:CDS 40.0%
ATCTTGCCAAGCAGGAATTT+AGG + chr5_4:9610608-9610627 Msa0836150:intron 40.0%
GCAAAACCTAAATTCCTGCT+TGG - chr5_4:9610617-9610636 None:intergenic 40.0%
TAACCTGGAAGAACCAATGA+AGG - chr5_4:9610660-9610679 None:intergenic 40.0%
!! GGTTTAGCTGTGTTTTTGCA+AGG - chr5_4:9610699-9610718 None:intergenic 40.0%
AAACACAGCTAAACCAGTCT+CGG + chr5_4:9610704-9610723 Msa0836150:CDS 40.0%
!! ATAAAACTGTTCTGGGACAG+TGG - chr5_4:9610800-9610819 None:intergenic 40.0%
! TGCCACTTATATTCGTCAAC+TGG - chr5_4:9611552-9611571 None:intergenic 40.0%
CGAATATAAGTGGCAACCTA+TGG + chr5_4:9611557-9611576 Msa0836150:CDS 40.0%
ATATAAGTGGCAACCTATGG+GGG + chr5_4:9611560-9611579 Msa0836150:CDS 40.0%
CCAGCAAATAAATGCTGCAA+TGG - chr5_4:9611603-9611622 None:intergenic 40.0%
CCATTGCAGCATTTATTTGC+TGG + chr5_4:9611600-9611619 Msa0836150:intron 40.0%
!!! ACTGGTTTTAGAGCCAAAGA+AGG + chr5_4:9611925-9611944 Msa0836150:CDS 40.0%
!!! CTGGTTTTAGAGCCAAAGAA+GGG + chr5_4:9611926-9611945 Msa0836150:CDS 40.0%
TCTATACCCTTCCATCATTC+AGG + chr5_4:9611988-9612007 Msa0836150:CDS 40.0%
TAGACAAAATGCCAAAGGAG+TGG - chr5_4:9612061-9612080 None:intergenic 40.0%
ACTTATCTGCTTCACCTCTA+TGG + chr5_4:9612089-9612108 Msa0836150:intron 40.0%
CTGCCATCTAGTAAAACAAC+TGG + chr5_4:9612219-9612238 Msa0836150:CDS 40.0%
TTGCCAGAGGTAAAAATGCA+CGG + chr5_4:9612246-9612265 Msa0836150:intron 40.0%
! TATCCGTGCATTTTTACCTC+TGG - chr5_4:9612252-9612271 None:intergenic 40.0%
GTGCTAGTTGCTGAAAAAAC+TGG + chr5_4:9613178-9613197 Msa0836150:intron 40.0%
! CTGCCAACAGGTTTTTATCT+TGG + chr5_4:9613294-9613313 Msa0836150:intron 40.0%
GGTGTATGATGCAGTATGTA+TGG + chr5_4:9613390-9613409 Msa0836150:intron 40.0%
TCCCTGTATGACATCAAACA+TGG - chr5_4:9613571-9613590 None:intergenic 40.0%
TGTTTGATGTCATACAGGGA+AGG + chr5_4:9613571-9613590 Msa0836150:intron 40.0%
GTTTGATGTCATACAGGGAA+GGG + chr5_4:9613572-9613591 Msa0836150:intron 40.0%
!! ACGAGGTCATTTGATTTGAC+TGG + chr5_4:9613696-9613715 Msa0836150:intron 40.0%
! TTGATTTGACTGGTTGTGTG+TGG + chr5_4:9613706-9613725 Msa0836150:intron 40.0%
ACTGTCTTGTAGGTGATCTA+TGG + chr5_4:9613749-9613768 Msa0836150:intron 40.0%
GAACCTATATGATGAACTCG+TGG + chr5_4:9613889-9613908 Msa0836150:intron 40.0%
TCACCACGAGTTCATCATAT+AGG - chr5_4:9613895-9613914 None:intergenic 40.0%
TATGATGAACTCGTGGTGAT+TGG + chr5_4:9613896-9613915 Msa0836150:intron 40.0%
ATGATGAACTCGTGGTGATT+GGG + chr5_4:9613897-9613916 Msa0836150:intron 40.0%
GGTAAAAGGCTGGAAAAGTT+TGG - chr5_4:9613972-9613991 None:intergenic 40.0%
TATAGTCTATTTCATGGGGG+GGG - chr5_4:9613993-9614012 None:intergenic 40.0%
TGTAATAGCAAACTCGCTGA+TGG - chr5_4:9614091-9614110 None:intergenic 40.0%
GCACCATATGTTAATCCTAC+TGG - chr5_4:9614395-9614414 None:intergenic 40.0%
GTAGGATTAACATATGGTGC+AGG + chr5_4:9614395-9614414 Msa0836150:intron 40.0%
! TTGACTCAAATTTTGTCGGG+AGG + chr5_4:9614492-9614511 Msa0836150:CDS 40.0%
! TGACTCAAATTTTGTCGGGA+GGG + chr5_4:9614493-9614512 Msa0836150:CDS 40.0%
TATGTTACCATTGCACACTC+TGG + chr5_4:9614516-9614535 Msa0836150:intron 40.0%
TTGGATTTGTCATTAGCGGA+TGG + chr5_4:9614806-9614825 Msa0836150:intron 40.0%
TTTGGCATCAGGATATGCTT+CGG - chr5_4:9615064-9615083 None:intergenic 40.0%
!!! AAGAACATGTGGCTGGTTTT+TGG - chr5_4:9615082-9615101 None:intergenic 40.0%
TTCTGATCTGCTCAATTCTG+AGG + chr5_4:9615159-9615178 Msa0836150:intron 40.0%
GCACAAAGATTGAAGCAACA+AGG + chr5_4:9615209-9615228 Msa0836150:CDS 40.0%
GCTCACAGCAAATTACGTAA+GGG - chr5_4:9615268-9615287 None:intergenic 40.0%
TGCTCACAGCAAATTACGTA+AGG - chr5_4:9615269-9615288 None:intergenic 40.0%
!! TTACGTAATTTGCTGTGAGC+AGG + chr5_4:9615268-9615287 Msa0836150:CDS 40.0%
! GCATCGGGTATTTGAAATTC+AGG + chr5_4:9615346-9615365 Msa0836150:intron 40.0%
TTTCAATTCATCCGGATGTC+TGG - chr5_4:9615457-9615476 None:intergenic 40.0%
GGATGAATTGAAACGAGAAC+AGG + chr5_4:9615464-9615483 Msa0836150:CDS 40.0%
ACGTCTTTGTGCATCAATTC+AGG + chr5_4:9615629-9615648 Msa0836150:CDS 40.0%
CGTCTTTGTGCATCAATTCA+GGG + chr5_4:9615630-9615649 Msa0836150:CDS 40.0%
AACAATCAGCCAGTCTTTCA+GGG - chr5_4:9615662-9615681 None:intergenic 40.0%
AAACAATCAGCCAGTCTTTC+AGG - chr5_4:9615663-9615682 None:intergenic 40.0%
! GAAAGACTGGCTGATTGTTT+AGG + chr5_4:9615663-9615682 Msa0836150:CDS 40.0%
! TTTAGGGCTTGACACATCAA+AGG + chr5_4:9615680-9615699 Msa0836150:CDS 40.0%
TCAAATACACTAGAGCAGCT+GGG - chr5_4:9616148-9616167 None:intergenic 40.0%
! CTGATTGGCTATAATTGCAG+GGG - chr5_4:9616308-9616327 None:intergenic 40.0%
! CCTGATTGGCTATAATTGCA+GGG - chr5_4:9616309-9616328 None:intergenic 40.0%
! ACCTGATTGGCTATAATTGC+AGG - chr5_4:9616310-9616329 None:intergenic 40.0%
ATCTTAGCAGATTATCACGC+TGG + chr5_4:9616420-9616439 Msa0836150:intron 40.0%
TCTGCTTATTGCTTCATGTC+AGG + chr5_4:9616494-9616513 Msa0836150:intron 40.0%
TTGCTTCATGTCAGGTCAAA+CGG + chr5_4:9616502-9616521 Msa0836150:intron 40.0%
CAACGGGCATCTTAATAGAA+AGG + chr5_4:9616752-9616771 Msa0836150:CDS 40.0%
GATGCAGCAAGATCAACTAT+TGG - chr5_4:9617228-9617247 None:intergenic 40.0%
ATTTCTGCCCTAATGAACCA+AGG - chr5_4:9617452-9617471 None:intergenic 40.0%
GAAAGATTATGGGGCCTTCA+TGG + chr5_4:9607984-9608003 Msa0836150:exon 45.0%
TCGACTCTCCTAAAGACATC+AGG + chr5_4:9608188-9608207 Msa0836150:CDS 45.0%
TTATTGCTGTGACAACCACG+GGG - chr5_4:9608246-9608265 None:intergenic 45.0%
GTAAAATGGGTCAGCATTCC+AGG - chr5_4:9609418-9609437 None:intergenic 45.0%
GGGATTCAATAAGGAGGTCA+CGG + chr5_4:9609474-9609493 Msa0836150:CDS 45.0%
TTCTGTGTGTTGAAAGCAGG+TGG + chr5_4:9609524-9609543 Msa0836150:intron 45.0%
CAATCCTGGAAGCAAGCATA+TGG - chr5_4:9609661-9609680 None:intergenic 45.0%
ATGGATAGCGACGTTCTTGT+TGG + chr5_4:9609748-9609767 Msa0836150:CDS 45.0%
CTTCTACACAGATCTCAGGT+AGG + chr5_4:9609802-9609821 Msa0836150:intron 45.0%
AGTTTAGACCACATGCTGCT+TGG - chr5_4:9610241-9610260 None:intergenic 45.0%
AAGCAGCATGTGGTCTAAAC+TGG + chr5_4:9610240-9610259 Msa0836150:CDS 45.0%
AGCAGCATGTGGTCTAAACT+GGG + chr5_4:9610241-9610260 Msa0836150:CDS 45.0%
GCATTGTAGAACGGTTGAGA+CGG - chr5_4:9610267-9610286 None:intergenic 45.0%
! CGAGCTTAGGCATTGTAGAA+CGG - chr5_4:9610276-9610295 None:intergenic 45.0%
ATGCCTAAGCTCGATAGAAG+AGG + chr5_4:9610283-9610302 Msa0836150:CDS 45.0%
TTGCCTCTTCTATCGAGCTT+AGG - chr5_4:9610289-9610308 None:intergenic 45.0%
GCAACACAAGACATGATAGC+AGG - chr5_4:9610334-9610353 None:intergenic 45.0%
GCTATCATGTCTTGTGTTGC+CGG + chr5_4:9610334-9610353 Msa0836150:CDS 45.0%
! GGAACCCATTTTCAAAGCGT+GGG - chr5_4:9610501-9610520 None:intergenic 45.0%
! TGGAACCCATTTTCAAAGCG+TGG - chr5_4:9610502-9610521 None:intergenic 45.0%
GTTGAGAAATCTTGCCAAGC+AGG + chr5_4:9610600-9610619 Msa0836150:intron 45.0%
!! CTACCTTCATTGGTTCTTCC+AGG + chr5_4:9610654-9610673 Msa0836150:intron 45.0%
! CCATCAGGGATTTTGCAGTT+TGG - chr5_4:9610765-9610784 None:intergenic 45.0%
CCAAACTGCAAAATCCCTGA+TGG + chr5_4:9610762-9610781 Msa0836150:CDS 45.0%
AAATCCCTGATGGAGCTAGT+AGG + chr5_4:9610772-9610791 Msa0836150:intron 45.0%
AATATGGGGAAACGGATGCA+TGG + chr5_4:9611479-9611498 Msa0836150:CDS 45.0%
AACGGATGCATGGTTGTCAA+TGG + chr5_4:9611489-9611508 Msa0836150:CDS 45.0%
CGCCAGTTGACGAATATAAG+TGG + chr5_4:9611547-9611566 Msa0836150:CDS 45.0%
ATACACGATGTAGCAGTTGG+AGG + chr5_4:9611637-9611656 Msa0836150:intron 45.0%
!! GTTTTCTATTTCAGGGTGCC+CGG + chr5_4:9611672-9611691 Msa0836150:intron 45.0%
!! TTTTCTATTTCAGGGTGCCC+GGG + chr5_4:9611673-9611692 Msa0836150:intron 45.0%
!! GTAACTCATGGTGTCGATGA+TGG + chr5_4:9611803-9611822 Msa0836150:CDS 45.0%
AAAAAGGCTGCTTCCTATGC+TGG + chr5_4:9611899-9611918 Msa0836150:CDS 45.0%
TAAAACCAGTCCTCCAGCAT+AGG - chr5_4:9611915-9611934 None:intergenic 45.0%
AACTTACTGAACTGCATCGC+AGG + chr5_4:9612140-9612159 Msa0836150:intron 45.0%
! GTTTTACTAGATGGCAGACG+AGG - chr5_4:9612216-9612235 None:intergenic 45.0%
ACTAAGAACGGCAGCTAAGA+TGG - chr5_4:9612496-9612515 None:intergenic 45.0%
GACCAAGAATGGCACATTCA+AGG + chr5_4:9612977-9612996 Msa0836150:intron 45.0%
! GACCTTGAATGTGCCATTCT+TGG - chr5_4:9612982-9613001 None:intergenic 45.0%
AACAAATCTCTGCAGTCTCC+AGG - chr5_4:9613129-9613148 None:intergenic 45.0%
TATGTGGAGGCGAGACAAAA+AGG + chr5_4:9613202-9613221 Msa0836150:CDS 45.0%
! GCATCGATGAAAACTGCATC+TGG + chr5_4:9613224-9613243 Msa0836150:CDS 45.0%
! TGGTCTTAAACGTCAGCAAC+TGG + chr5_4:9613244-9613263 Msa0836150:CDS 45.0%
! TTTTGAGCACTCGGAACTAG+AGG - chr5_4:9613330-9613349 None:intergenic 45.0%
ATGCAGTATGTATGGATGCC+TGG + chr5_4:9613398-9613417 Msa0836150:intron 45.0%
TGCAGTATGTATGGATGCCT+GGG + chr5_4:9613399-9613418 Msa0836150:intron 45.0%
AAGGAACTTCACGCAGCTAA+TGG - chr5_4:9613868-9613887 None:intergenic 45.0%
TATTTCATGGGGGGGGTAAA+AGG - chr5_4:9613986-9614005 None:intergenic 45.0%
TAAAGATGGCACCCCATATG+AGG + chr5_4:9614321-9614340 Msa0836150:CDS 45.0%
GTGCAGGTTATTGAACGCAA+AGG + chr5_4:9614411-9614430 Msa0836150:intron 45.0%
AGAATAGCCAGAGTGTGCAA+TGG - chr5_4:9614526-9614545 None:intergenic 45.0%
CTTCGCATGACCTATAAGCA+CGG - chr5_4:9614595-9614614 None:intergenic 45.0%
ACCACCCTGCTATAGCATTT+GGG - chr5_4:9614749-9614768 None:intergenic 45.0%
AACCACCCTGCTATAGCATT+TGG - chr5_4:9614750-9614769 None:intergenic 45.0%
! GGATATGCATCAAGGCATCT+GGG - chr5_4:9614778-9614797 None:intergenic 45.0%
! TGGATATGCATCAAGGCATC+TGG - chr5_4:9614779-9614798 None:intergenic 45.0%
GCGGATGGCACTTCTTAAAT+TGG + chr5_4:9614821-9614840 Msa0836150:intron 45.0%
!! GAGAAGGCGTTAGAGTTTGT+TGG + chr5_4:9614862-9614881 Msa0836150:intron 45.0%
ACTAGCATTCAATGGTTGGC+TGG - chr5_4:9614958-9614977 None:intergenic 45.0%
TTGGCATCAGGATATGCTTC+GGG - chr5_4:9615063-9615082 None:intergenic 45.0%
TGCTTACAAGAACATGTGGC+TGG - chr5_4:9615089-9615108 None:intergenic 45.0%
GCCACATGTTCTTGTAAGCA+CGG + chr5_4:9615089-9615108 Msa0836150:intron 45.0%
TCCGTGCTTACAAGAACATG+TGG - chr5_4:9615093-9615112 None:intergenic 45.0%
AAGCAACAAGGTTACGCATC+TGG + chr5_4:9615221-9615240 Msa0836150:CDS 45.0%
TTTGAGTAGGGCGGTAATTC+AGG + chr5_4:9615405-9615424 Msa0836150:intron 45.0%
! TGGTTTGTCTCAGCATTCAG+AGG + chr5_4:9615710-9615729 Msa0836150:intron 45.0%
! TTGCTGGTGATGATGATGAG+AGG + chr5_4:9615844-9615863 Msa0836150:CDS 45.0%
CAAATACACTAGAGCAGCTG+GGG - chr5_4:9616147-9616166 None:intergenic 45.0%
GTCAAATACACTAGAGCAGC+TGG - chr5_4:9616149-9616168 None:intergenic 45.0%
AATGAAAAGCCAACCAGCTC+AGG + chr5_4:9616205-9616224 Msa0836150:CDS 45.0%
CCCTGCAATTATAGCCAATC+AGG + chr5_4:9616306-9616325 Msa0836150:CDS 45.0%
! CTGCCATTTCAGCCATATGA+AGG + chr5_4:9616372-9616391 Msa0836150:intron 45.0%
ACACGTTTCATCGTCACACT+GGG - chr5_4:9616652-9616671 None:intergenic 45.0%
TACACGTTTCATCGTCACAC+TGG - chr5_4:9616653-9616672 None:intergenic 45.0%
! TCGAAGTGTCAGCTTTCGTT+TGG + chr5_4:9616683-9616702 Msa0836150:CDS 45.0%
AGTGTCAGCTTTCGTTTGGT+TGG + chr5_4:9616687-9616706 Msa0836150:CDS 45.0%
CCAAATTATCCTCGCTGCAA+CGG + chr5_4:9616735-9616754 Msa0836150:CDS 45.0%
CAAATTATCCTCGCTGCAAC+GGG + chr5_4:9616736-9616755 Msa0836150:CDS 45.0%
GGATGCTAGGACATGCTTAA+TGG + chr5_4:9616980-9616999 Msa0836150:intron 45.0%
! GTCTAGGATACCGATAGAGA+AGG + chr5_4:9617185-9617204 Msa0836150:CDS 45.0%
GCAGCTGGACAAACTGAATT+TGG - chr5_4:9617339-9617358 None:intergenic 45.0%
TGGATTCACATATGAGCAGC+TGG - chr5_4:9617354-9617373 None:intergenic 45.0%
TATGTGAATCCACACCAGCA+AGG + chr5_4:9617362-9617381 Msa0836150:three_prime_UTR 45.0%
ATGTGAATCCACACCAGCAA+GGG + chr5_4:9617363-9617382 Msa0836150:three_prime_UTR 45.0%
! GTAGCTTGCAAGTGAAGCTA+TGG + chr5_4:9617390-9617409 Msa0836150:three_prime_UTR 45.0%
AAGTGTTACAGCCACATCCT+TGG + chr5_4:9617432-9617451 Msa0836150:three_prime_UTR 45.0%
AGCCACATCCTTGGTTCATT+AGG + chr5_4:9617441-9617460 Msa0836150:three_prime_UTR 45.0%
GCCACATCCTTGGTTCATTA+GGG + chr5_4:9617442-9617461 Msa0836150:three_prime_UTR 45.0%
!! ATTATTAAATTAAGTATAAT+AGG + chr5_4:9610112-9610131 Msa0836150:intron 5.0%
!! CAAAAAAATTATATAAAAAA+AGG - chr5_4:9610827-9610846 None:intergenic 5.0%
!!! AAAGAAAAATTAAAATTTTA+GGG - chr5_4:9612863-9612882 None:intergenic 5.0%
TACCTGCTCAGCATCCCAAA+GGG + chr5_4:9608027-9608046 Msa0836150:CDS 50.0%
TATTGCTGTGACAACCACGG+GGG - chr5_4:9608245-9608264 None:intergenic 50.0%
!! TTCCACTCTGAAGCCAGCAT+AGG - chr5_4:9609391-9609410 None:intergenic 50.0%
! GTAGAGTACCAAGCAGCATG+TGG + chr5_4:9610230-9610249 Msa0836150:CDS 50.0%
TCATGTCTTGTGTTGCCGGT+CGG + chr5_4:9610338-9610357 Msa0836150:CDS 50.0%
CGTATCACAAAGAAGCCGAC+CGG - chr5_4:9610356-9610375 None:intergenic 50.0%
!! TGGGTCCCACGCTTTGAAAA+TGG + chr5_4:9610493-9610512 Msa0836150:intron 50.0%
!! GGGTCCCACGCTTTGAAAAT+GGG + chr5_4:9610494-9610513 Msa0836150:intron 50.0%
ACAGCTAAACCAGTCTCGGA+AGG + chr5_4:9610708-9610727 Msa0836150:CDS 50.0%
! CCTGAAGAGTTTTCCCCCAT+AGG - chr5_4:9611576-9611595 None:intergenic 50.0%
CCTATGGGGGAAAACTCTTC+AGG + chr5_4:9611573-9611592 Msa0836150:CDS 50.0%
ACGAAGCGCAGAGTAACTCA+TGG + chr5_4:9611791-9611810 Msa0836150:CDS 50.0%
!! CAAAGGAGTGGAAGTGTCAC+AGG - chr5_4:9612049-9612068 None:intergenic 50.0%
CTGTGACACTTCCACTCCTT+TGG + chr5_4:9612047-9612066 Msa0836150:intron 50.0%
AACAACTGGAGTCTTGCCAG+AGG + chr5_4:9612233-9612252 Msa0836150:CDS 50.0%
CACGGTAACACGGTAACAGT+TGG - chr5_4:9612350-9612369 None:intergenic 50.0%
!! AGCTGCCGTTCTTAGTCTTG+TGG + chr5_4:9612500-9612519 Msa0836150:intron 50.0%
GCTGGCCACAAGACTAAGAA+CGG - chr5_4:9612508-9612527 None:intergenic 50.0%
! GGTGATTTTCTTTCCCCTCC+TGG + chr5_4:9613108-9613127 Msa0836150:intron 50.0%
AATCTCTGCAGTCTCCAGGA+GGG - chr5_4:9613125-9613144 None:intergenic 50.0%
AAATCTCTGCAGTCTCCAGG+AGG - chr5_4:9613126-9613145 None:intergenic 50.0%
CACTGAAGCTTACTGCCAAC+AGG + chr5_4:9613282-9613301 Msa0836150:CDS 50.0%
ACTCGCTGATGGCAAGAAAC+AGG - chr5_4:9614080-9614099 None:intergenic 50.0%
TTGATATTGTCCGCCGTGAC+TGG + chr5_4:9614436-9614455 Msa0836150:CDS 50.0%
TCGCTAACAAGCTCCAGTCA+CGG - chr5_4:9614452-9614471 None:intergenic 50.0%
ATTGCGGCTTCCGTGCTTAT+AGG + chr5_4:9614582-9614601 Msa0836150:intron 50.0%
TTGGGCCCAAATGCTATAGC+AGG + chr5_4:9614741-9614760 Msa0836150:intron 50.0%
TGGGCCCAAATGCTATAGCA+GGG + chr5_4:9614742-9614761 Msa0836150:intron 50.0%
GAGGAACGGACAAGTAGCAT+TGG + chr5_4:9615002-9615021 Msa0836150:CDS 50.0%
!!! TGTGGCTGGTTTTTGGCATC+AGG - chr5_4:9615075-9615094 None:intergenic 50.0%
TACGCATCTGGTTGCTCTGT+TGG + chr5_4:9615233-9615252 Msa0836150:CDS 50.0%
TCTGGCACGTAGAGCAATTC+CGG - chr5_4:9615439-9615458 None:intergenic 50.0%
TGAAACGAGAACAGGGGACA+TGG + chr5_4:9615472-9615491 Msa0836150:CDS 50.0%
TTGTCACAACAGGTGCCTTG+CGG + chr5_4:9615516-9615535 Msa0836150:intron 50.0%
CCACAGGATGAATCTGCAAG+AGG - chr5_4:9615605-9615624 None:intergenic 50.0%
CCTCTTGCAGATTCATCCTG+TGG + chr5_4:9615602-9615621 Msa0836150:intron 50.0%
GCACAAAGACGTGATACCAC+AGG - chr5_4:9615621-9615640 None:intergenic 50.0%
!! TTGGTTGGTGATTCTGAGCG+AGG + chr5_4:9616702-9616721 Msa0836150:CDS 50.0%
CCGTTGCAGCGAGGATAATT+TGG - chr5_4:9616738-9616757 None:intergenic 50.0%
AGGTATGTCACTGGGATGCT+AGG + chr5_4:9616967-9616986 Msa0836150:intron 50.0%
ACCAGATGGAGGCAAAGTCT+AGG + chr5_4:9617169-9617188 Msa0836150:intron 50.0%
TCCTAGACTTTGCCTCCATC+TGG - chr5_4:9617173-9617192 None:intergenic 50.0%
TGTGAATCCACACCAGCAAG+GGG + chr5_4:9617364-9617383 Msa0836150:three_prime_UTR 50.0%
GCCCTAATGAACCAAGGATG+TGG - chr5_4:9617446-9617465 None:intergenic 50.0%
CTACCTGCTCAGCATCCCAA+AGG + chr5_4:9608026-9608045 Msa0836150:CDS 55.0%
ATTGCTGTGACAACCACGGG+GGG - chr5_4:9608244-9608263 None:intergenic 55.0%
!! CTCCTATGCTGGCTTCAGAG+TGG + chr5_4:9609386-9609405 Msa0836150:CDS 55.0%
GCTTCAGAGTGGAAGAGACC+TGG + chr5_4:9609397-9609416 Msa0836150:CDS 55.0%
GAGCAACTTCCTTCCGAGAC+TGG - chr5_4:9610720-9610739 None:intergenic 55.0%
GGCACCTACTAGCTCCATCA+GGG - chr5_4:9610779-9610798 None:intergenic 55.0%
TGGCACCTACTAGCTCCATC+AGG - chr5_4:9610780-9610799 None:intergenic 55.0%
TCAACTGGCGTGTGAGAGGA+AGG - chr5_4:9611537-9611556 None:intergenic 55.0%
TTCGTCAACTGGCGTGTGAG+AGG - chr5_4:9611541-9611560 None:intergenic 55.0%
AAGGCTGCTTCCTATGCTGG+AGG + chr5_4:9611902-9611921 Msa0836150:CDS 55.0%
TGCTTCCTATGCTGGAGGAC+TGG + chr5_4:9611907-9611926 Msa0836150:CDS 55.0%
ATCTCTGCAGTCTCCAGGAG+GGG - chr5_4:9613124-9613143 None:intergenic 55.0%
AGCACTCGGAACTAGAGGCT+GGG - chr5_4:9613325-9613344 None:intergenic 55.0%
AGGGTAATGAGCTCAGCCAG+CGG - chr5_4:9613453-9613472 None:intergenic 55.0%
CTAACAAGCTCCAGTCACGG+CGG - chr5_4:9614449-9614468 None:intergenic 55.0%
GCCCAAATGCTATAGCAGGG+TGG + chr5_4:9614745-9614764 Msa0836150:intron 55.0%
GCATCAGGATATGCTTCGGG+TGG - chr5_4:9615060-9615079 None:intergenic 55.0%
GGTAATTCAGGCAGTGCGAC+CGG + chr5_4:9615417-9615436 Msa0836150:CDS 55.0%
TGCTCTACGTGCCAGACATC+CGG + chr5_4:9615443-9615462 Msa0836150:CDS 55.0%
GTATCAGGGATGTGAGCCGT+TGG + chr5_4:9616111-9616130 Msa0836150:CDS 55.0%
CTGGGGCATGACAAGACCAA+CGG - chr5_4:9616130-9616149 None:intergenic 55.0%
TTAAGATGCCCGTTGCAGCG+AGG - chr5_4:9616747-9616766 None:intergenic 55.0%
ATCAGGGACCGTTGTGCCTT+TGG + chr5_4:9617261-9617280 Msa0836150:CDS 55.0%
TCAGGGACCGTTGTGCCTTT+GGG + chr5_4:9617262-9617281 Msa0836150:CDS 55.0%
! TCACCCACCCAAAGGCACAA+CGG - chr5_4:9617272-9617291 None:intergenic 55.0%
GTGAATCCACACCAGCAAGG+GGG + chr5_4:9617365-9617384 Msa0836150:three_prime_UTR 55.0%
!! CACCCTTTGGGATGCTGAGC+AGG - chr5_4:9608032-9608051 None:intergenic 60.0%
ATACTCCACCCTCTGTGCCC+GGG - chr5_4:9611693-9611712 None:intergenic 60.0%
GATACTCCACCCTCTGTGCC+CGG - chr5_4:9611694-9611713 None:intergenic 60.0%
GAGCACTCGGAACTAGAGGC+TGG - chr5_4:9613326-9613345 None:intergenic 60.0%
TCATGGGGGGGGTAAAAGGC+TGG - chr5_4:9613982-9614001 None:intergenic 60.0%
GGGCACAAGCCCTGAAAGAC+TGG + chr5_4:9615650-9615669 Msa0836150:CDS 60.0%
AAAGCCAACCAGCTCAGGCG+CGG + chr5_4:9616210-9616229 Msa0836150:CDS 60.0%
GGACCGTTGTGCCTTTGGGT+GGG + chr5_4:9617266-9617285 Msa0836150:CDS 60.0%
CTGCAGCTTCACCCACCCAA+AGG - chr5_4:9617280-9617299 None:intergenic 60.0%
CTTTGGGTGGGTGAAGCTGC+AGG + chr5_4:9617278-9617297 Msa0836150:CDS 60.0%
CTACAACCCCCTTGCTGGTG+TGG - chr5_4:9617374-9617393 None:intergenic 60.0%
GCAAGCTACAACCCCCTTGC+TGG - chr5_4:9617379-9617398 None:intergenic 60.0%
AGATTCCTCCGCGCCTGAGC+TGG - chr5_4:9616221-9616240 None:intergenic 65.0%
GGGACCGTTGTGCCTTTGGG+TGG + chr5_4:9617265-9617284 Msa0836150:CDS 65.0%
CACTCGAGTGACTCCCCCCG+TGG + chr5_4:9608228-9608247 Msa0836150:CDS 70.0%
! TTCAGGGTGCCCGGGCACAG+AGG + chr5_4:9611681-9611700 Msa0836150:intron 70.0%
! TCAGGGTGCCCGGGCACAGA+GGG + chr5_4:9611682-9611701 Msa0836150:intron 70.0%
TCCTCCGCGCCTGAGCTGGT+TGG - chr5_4:9616217-9616236 None:intergenic 70.0%
GCCAACCAGCTCAGGCGCGG+AGG + chr5_4:9616213-9616232 Msa0836150:CDS 75.0%
! GGGTGCCCGGGCACAGAGGG+TGG + chr5_4:9611685-9611704 Msa0836150:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 9607957 9617602 9607957 ID=Msa0836150;Name=Msa0836150
chr5_4 mRNA 9607957 9617602 9607957 ID=Msa0836150-mRNA-1;Parent=Msa0836150;Name=Msa0836150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=35|1|1|1|1|1|26|282|1016
chr5_4 exon 9607957 9608048 9607957 ID=Msa0836150-mRNA-1:exon:4246;Parent=Msa0836150-mRNA-1
chr5_4 exon 9608160 9608345 9608160 ID=Msa0836150-mRNA-1:exon:4247;Parent=Msa0836150-mRNA-1
chr5_4 exon 9609379 9609542 9609379 ID=Msa0836150-mRNA-1:exon:4248;Parent=Msa0836150-mRNA-1
chr5_4 exon 9609705 9609819 9609705 ID=Msa0836150-mRNA-1:exon:4249;Parent=Msa0836150-mRNA-1
chr5_4 exon 9610226 9610405 9610226 ID=Msa0836150-mRNA-1:exon:4250;Parent=Msa0836150-mRNA-1
chr5_4 exon 9610676 9610789 9610676 ID=Msa0836150-mRNA-1:exon:4251;Parent=Msa0836150-mRNA-1
chr5_4 exon 9611475 9611594 9611475 ID=Msa0836150-mRNA-1:exon:4252;Parent=Msa0836150-mRNA-1
chr5_4 exon 9611686 9612009 9611686 ID=Msa0836150-mRNA-1:exon:4253;Parent=Msa0836150-mRNA-1
chr5_4 exon 9612162 9612254 9612162 ID=Msa0836150-mRNA-1:exon:4254;Parent=Msa0836150-mRNA-1
chr5_4 exon 9613185 9613303 9613185 ID=Msa0836150-mRNA-1:exon:4255;Parent=Msa0836150-mRNA-1
chr5_4 exon 9613404 9613476 9613404 ID=Msa0836150-mRNA-1:exon:4256;Parent=Msa0836150-mRNA-1
chr5_4 exon 9613588 9613644 9613588 ID=Msa0836150-mRNA-1:exon:4257;Parent=Msa0836150-mRNA-1
chr5_4 exon 9613761 9613853 9613761 ID=Msa0836150-mRNA-1:exon:4258;Parent=Msa0836150-mRNA-1
chr5_4 exon 9614220 9614342 9614220 ID=Msa0836150-mRNA-1:exon:4259;Parent=Msa0836150-mRNA-1
chr5_4 exon 9614417 9614514 9614417 ID=Msa0836150-mRNA-1:exon:4260;Parent=Msa0836150-mRNA-1
chr5_4 exon 9614604 9614649 9614604 ID=Msa0836150-mRNA-1:exon:4261;Parent=Msa0836150-mRNA-1
chr5_4 exon 9614988 9615101 9614988 ID=Msa0836150-mRNA-1:exon:4262;Parent=Msa0836150-mRNA-1
chr5_4 exon 9615206 9615289 9615206 ID=Msa0836150-mRNA-1:exon:4263;Parent=Msa0836150-mRNA-1
chr5_4 exon 9615414 9615527 9615414 ID=Msa0836150-mRNA-1:exon:4264;Parent=Msa0836150-mRNA-1
chr5_4 exon 9615612 9615701 9615612 ID=Msa0836150-mRNA-1:exon:4265;Parent=Msa0836150-mRNA-1
chr5_4 exon 9615792 9615865 9615792 ID=Msa0836150-mRNA-1:exon:4266;Parent=Msa0836150-mRNA-1
chr5_4 exon 9616111 9616327 9616111 ID=Msa0836150-mRNA-1:exon:4267;Parent=Msa0836150-mRNA-1
chr5_4 exon 9616516 9616569 9616516 ID=Msa0836150-mRNA-1:exon:4268;Parent=Msa0836150-mRNA-1
chr5_4 exon 9616654 9616773 9616654 ID=Msa0836150-mRNA-1:exon:4269;Parent=Msa0836150-mRNA-1
chr5_4 exon 9616894 9616968 9616894 ID=Msa0836150-mRNA-1:exon:4270;Parent=Msa0836150-mRNA-1
chr5_4 exon 9617174 9617602 9617174 ID=Msa0836150-mRNA-1:exon:4271;Parent=Msa0836150-mRNA-1
chr5_4 five_prime_UTR 9607957 9607991 9607957 ID=Msa0836150-mRNA-1:five_prime_utr;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9607992 9608048 9607992 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9608160 9608345 9608160 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9609379 9609542 9609379 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9609705 9609819 9609705 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9610226 9610405 9610226 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9610676 9610789 9610676 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9611475 9611594 9611475 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9611686 9612009 9611686 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9612162 9612254 9612162 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9613185 9613303 9613185 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9613404 9613476 9613404 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9613588 9613644 9613588 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9613761 9613853 9613761 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9614220 9614342 9614220 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9614417 9614514 9614417 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9614604 9614649 9614604 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9614988 9615101 9614988 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9615206 9615289 9615206 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9615414 9615527 9615414 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9615612 9615701 9615612 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9615792 9615865 9615792 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9616111 9616327 9616111 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9616516 9616569 9616516 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9616654 9616773 9616654 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9616894 9616968 9616894 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 CDS 9617174 9617320 9617174 ID=Msa0836150-mRNA-1:cds;Parent=Msa0836150-mRNA-1
chr5_4 three_prime_UTR 9617321 9617602 9617321 ID=Msa0836150-mRNA-1:three_prime_utr;Parent=Msa0836150-mRNA-1
Gene Sequence

>Msa0836150

ATGGGGCCTTCATGGCTACAAGTTTCAAACTTTTCTACCTGCTCAGCATCCCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTCGACTCTCCTAAAGACATCAGGAATTCTTCTTCAAAAATCACTCGAGTGACTCCCCCCGTGGTTGTCACAGCAATAAACTTGAAGACCACCATAAATGAAAAACAGAACATAAATGAAATTGTATCTGCATCTGTTGTCAGTTGCAATATGGTTAAGATTGACACTCCTATGCTGGCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGCAAACTTGATGGGAATATATTTCCAATGGGATTCAATAAGGAGGTCACGGACAGAAACATAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTCTAATGTTACAATTACACAAGATGGATAGCGACGTTCTTGTTGGACATAATATTTCTGGATTCGACCTCGATGTTCTTCTACACAGATCTCAGGCTTGTAGAGTACCAAGCAGCATGTGGTCTAAACTGGGCCGTCTCAACCGTTCTACAATGCCTAAGCTCGATAGAAGAGGCAAAACATTTGGTTTTGGAGCTGATCCTGCTATCATGTCTTGTGTTGCCGGTCGGCTTCTTTGTGATACGTATTTATGTTCTCGTGACCTATTAAAGGAGGTTAGCTATTCTTTAACTCACCTTGCAAAAACACAGCTAAACCAGTCTCGGAAGGAAGTTGCTCCAAATGAAGTTCCAAAAATGTTCCAAACTGCAAAATCCCTGATGGAGCTAATTGAATATGGGGAAACGGATGCATGGTTGTCAATGGAACTCATGTTTTATTTGAGTGTCCTTCCTCTCACACGCCAGTTGACGAATATAAGTGGCAACCTATGGGGGAAAACTCTTCAGGGTGCCCGGGCACAGAGGGTGGAGTATCTTTTGTTGCATGAATTCCATAATAAGAAATATATTGTTCCAGACAAGTTTTCTAATTACGCAAAAGAAACAAAATTGACGAAGCGCAGAGTAACTCATGGTGTCGATGATGGCAACTTTGACGATGCAGATATTAATGATGGAAACTATCATAATGATGCTTCTGAAAGTGATCATAAGAAAAACAAAAAGGCTGCTTCCTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATATGATAAATACATATTACTTCTGGACTTCAACAGTCTATACCCTTCCATCATTCAGGAATATAATATCTGCTTCACAACTGTTGAAAGATCTTCAGATGGATCTTTTCCTCGTCTGCCATCTAGTAAAACAACTGGAGTCTTGCCAGAGTTGCTGAAAAAACTGGTTATGTGGAGGCGAGACAAAAAGGCATCGATGAAAACTGCATCTGGTCTTAAACGTCAGCAACTGGACATTCAGCAGCAAGCACTGAAGCTTACTGCCAACAGTATGTATGGATGCCTGGGATTTTCCAATTCAAGATTTTATGCAAAACCGCTGGCTGAGCTCATTACCCTACAAGGAAGGGAGATACTACAAAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTGATCTATGGTGATACTGATTCAATAATGGTTTACAGTGGGCTAGATGATATTGCAAAAGCACATTCAATATCTAAGAAAGTTATTCAAGAGGTCAATAAGAAATATCGGTGCTTAGAAATTGATCTTGATGGTTTGTATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTTAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTGTTAGCGAAAGATTTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGCGAAGATGTCGTCGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCATTGGAAAAATACGTCATCACAAAGACATTGACTAAACCACCCGAAGCATATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACGCATCTGGTTGCTCTGTTGGCGATACAATCCCTTACGTAATTTGCTGTGAGCAGGGCGGTAATTCAGGCAGTGCGACCGGAATTGCTCTACGTGCCAGACATCCGGATGAATTGAAACGAGAACAGGGGACATGGCTAATTGATATTGATTACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGCACAAGCCCTGAAAGACTGGCTGATTGTTTAGGGCTTGACACATCAAAGTTTCAACATAAATCAAGTGAAGCAAGGGATGATCCTACAAGCTCACTTTTATTTGCTGGTGATGATGATGAGAGGTATCAGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCTAGTGTATTTGACTGCCCTCCTGTGTTTAAATCTATTTGTATGTTGGGAAATGAAAAGCCAACCAGCTCAGGCGCGGAGGAATCTGACTACAATTTCTGGCGCAAGCTGTGCTGTCCCAAATGCTTTGAAAATGGTGTTGGTAGAATTTCCCCTGCAATTATAGCCAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTTTAATGTATTATAGAGGTTTACTAATTTGTGACGATGAAACGTGTAAGCATACAACTCGAAGTGTCAGCTTTCGTTTGGTTGGTGATTCTGAGCGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGTACACTGAAGCGGACTTGTACAAGCAGCTCTCATATTTTTGTCATGTGTTTGATACTGTTTGTTATATAGAAAAGATGGAGGCAAAGTCTAGGATACCGATAGAGAAGGAGTTGATCAAAATCAGGCCAATAGTTGATCTTGCTGCATCAACAATACAAAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAAGCTGCAGGATCTAGTTGTTGCAATTTAA
Protein sequence

>Msa0836150

MGPSWLQVSNFSTCSASQRVSWCKFEVTVDSPKDIRNSSSKITRVTPPVVVTAINLKTTINEKQNINEIVSASVVSCNMVKIDTPMLASEWKRPGMLTHFTVIRKLDGNIFPMGFNKEVTDRNIKAGSNVLCVESSERALLNRLMLQLHKMDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWSKLGRLNRSTMPKLDRRGKTFGFGADPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPNEVPKMFQTAKSLMELIEYGETDAWLSMELMFYLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHEFHNKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNFDDADINDGNYHNDASESDHKKNKKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLKKLVMWRRDKKASMKTASGLKRQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKAHSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYASGCSVGDTIPYVICCEQGGNSGSATGIALRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEARDDPTSSLLFAGDDDERYQGCEPLVLSCPSCSSVFDCPPVFKSICMLGNEKPTSSGAEESDYNFWRKLCCPKCFENGVGRISPAIIANQVKRQAEKFVLMYYRGLLICDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI*