AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0714790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714790 MtrunA17_Chr5g0402061 96.189 1548 53 3 1 1544 1 1546 0.0 3002
Msa0714790 MtrunA17_Chr3g0130421 26.941 657 395 14 676 1306 370 967 4.58e-54 207
Msa0714790 MtrunA17_Chr7g0272751 22.617 703 415 17 663 1294 1207 1851 1.47e-25 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0714790 AT5G67100.2 60.437 1557 568 19 1 1542 1 1524 0.0 1844
Msa0714790 AT5G67100.1 60.437 1557 568 19 1 1542 1 1524 0.0 1844
Msa0714790 AT5G63960.1 27.340 673 391 17 654 1294 360 966 3.06e-52 202
Msa0714790 AT5G63960.2 27.246 668 382 17 659 1294 388 983 1.01e-51 200
Msa0714790 AT1G67500.1 23.649 740 411 26 638 1294 1074 1742 1.56e-28 125
Msa0714790 AT1G67500.6 23.649 740 411 26 638 1294 1074 1742 1.56e-28 125
Msa0714790 AT1G67500.7 23.649 740 411 26 638 1294 1099 1767 1.69e-28 125
Msa0714790 AT1G67500.2 23.649 740 411 26 638 1294 1099 1767 1.69e-28 125
Msa0714790 AT1G67500.5 23.649 740 411 26 638 1294 1073 1741 1.91e-28 125
Msa0714790 AT1G67500.3 23.649 740 411 26 638 1294 1073 1741 1.91e-28 125
Msa0714790 AT1G67500.4 25.214 583 310 20 638 1147 1073 1602 4.18e-27 121

Find 393 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTGGACATAATATTTC+TGG 0.126294 5_1:-7599540 Msa0714790:CDS
TCTACATGAATTTACTTTAA+AGG 0.136282 5_1:+7591614 None:intergenic
AAACAATCAGCCAGTCTTTC+AGG 0.154926 5_1:+7593558 None:intergenic
TCTGATTAAAAGAAAGATTA+TGG 0.164125 5_1:-7601330 Msa0714790:CDS
GAACAATATATTTCTTATTA+TGG 0.176581 5_1:+7597573 None:intergenic
ACAACAGGTGGAGTTTAATT+TGG 0.179273 5_1:-7603263 Msa0714790:CDS
TGATTTGGTCAGATTGAATA+TGG 0.185539 5_1:-7597840 Msa0714790:intron
TGGCTGCGTGCGGTGGCGTC+AGG 0.206165 5_1:+7604258 None:intergenic
TAAAATTAAATGCAGGTATC+AGG 0.216098 5_1:-7593122 Msa0714790:intron
CAAATATTTGTATTGTTCTA+TGG 0.228019 5_1:+7591719 None:intergenic
ATGGGTACTCTTTATTTGTT+TGG 0.229127 5_1:-7603178 Msa0714790:CDS
GGAGTATTATGGAGCTAATA+TGG 0.230146 5_1:-7603197 Msa0714790:CDS
CTCTAACCCTAACCCTATTC+TGG 0.242766 5_1:+7603573 None:intergenic
ATGTTCTCGTGACCTATTAA+AGG 0.243064 5_1:-7598922 Msa0714790:CDS
AGCAAAACATCTGGTGGATT+TGG 0.247808 5_1:-7602073 Msa0714790:CDS
GAAAGACTGGCTGATTGTTT+AGG 0.257739 5_1:-7593555 Msa0714790:CDS
GTTTGCGAATAACAGTAAAA+TGG 0.261527 5_1:+7599874 None:intergenic
TCAAAATAACTTGAATTTAG+AGG 0.262421 5_1:-7595597 Msa0714790:intron
AATAATTTACCTCCTTTAAT+AGG 0.262800 5_1:+7598910 None:intergenic
AGGAATCTGACTACAATTTC+TGG 0.268580 5_1:-7592985 Msa0714790:CDS
AAAGACTGGCTGATTGTTTA+GGG 0.269262 5_1:-7593554 Msa0714790:CDS
TGTTAATGATGCACGGATTA+AGG 0.273941 5_1:-7603722 Msa0714790:CDS
GATGCTTATGAGGAGTATTA+TGG 0.274878 5_1:-7603208 Msa0714790:CDS
GAAGAATTCCTGATGTCTTT+AGG 0.282882 5_1:+7601107 None:intergenic
GTGCGGTGGCGTCAGGGCCT+CGG 0.284382 5_1:+7604265 None:intergenic
TTGTGGTGTGGTGGTGGATC+GGG 0.285272 5_1:+7604197 None:intergenic
GAAAGTTTCTGTGCTCTTCT+TGG 0.291535 5_1:-7601672 Msa0714790:CDS
AGCCACATCCTTGGTTCATT+AGG 0.293116 5_1:-7591777 Msa0714790:three_prime_UTR
AGGAGTGGTGGTGGTGGAGG+CGG 0.298671 5_1:-7603316 Msa0714790:CDS
GTTAATCAGCAAACCTTAAC+AGG 0.301188 5_1:+7602027 None:intergenic
AGTAGAAGTGAACGAGAGTT+TGG 0.303680 5_1:-7603539 Msa0714790:CDS
TCTATACCCTTCCATCATTC+AGG 0.304023 5_1:-7597315 Msa0714790:intron
ATCGTTGATGACGACGGATT+TGG 0.310489 5_1:-7604084 Msa0714790:CDS
CCGTTGCAGCGAGGATAATT+TGG 0.311908 5_1:+7592483 None:intergenic
CTTTAGCATGGCACCTGTTA+AGG 0.311942 5_1:-7602040 Msa0714790:intron
GCAGCTGGACAAACTGAATT+TGG 0.315705 5_1:+7591882 None:intergenic
ACGTCTTTGTGCATCAATTC+AGG 0.315817 5_1:-7593589 Msa0714790:CDS
GTTGTTGCAATTTAAATTGC+AGG 0.317319 5_1:-7591912 Msa0714790:exon
CACAGAAACTTTCTCCTTTG+AGG 0.318146 5_1:+7601682 None:intergenic
GCCACATCCTTGGTTCATTA+GGG 0.318541 5_1:-7591776 Msa0714790:three_prime_UTR
GCTATCATGTCTTGTGTTGC+CGG 0.318803 5_1:-7598969 Msa0714790:CDS
TTTGAGTAGGGCGGTAATTC+AGG 0.320292 5_1:-7593813 Msa0714790:intron
AGCTTGTTAGCGAAAGATTT+AGG 0.323341 5_1:-7594758 Msa0714790:CDS
ATCAGGGACCGTTGTGCCTT+TGG 0.325476 5_1:-7591957 Msa0714790:CDS
TCAACTACTTTGACATGGTT+TGG 0.325686 5_1:+7591684 None:intergenic
CCCTCTGCTGAATCTGTATT+AGG 0.326291 5_1:-7603688 Msa0714790:CDS
ATTTCCAATGGGATTCAATA+AGG 0.326657 5_1:-7599838 Msa0714790:CDS
TAAGAAAAGTAGAGATGATA+AGG 0.328138 5_1:-7603842 Msa0714790:CDS
TAAGCATCAAGTATGTAAAA+AGG 0.331553 5_1:+7603223 None:intergenic
AAGCAGCATGTGGTCTAAAC+TGG 0.332642 5_1:-7599063 Msa0714790:CDS
TGATAAATACATATTACTTC+TGG 0.334762 5_1:-7597348 Msa0714790:CDS
GTTGATAATTAGGTCAAAAC+AGG 0.337171 5_1:-7602419 Msa0714790:intron
TGCTTAGAAATTGATCTTGA+TGG 0.337619 5_1:-7594979 Msa0714790:CDS
CCCTGCAATTATAGCCAATC+AGG 0.338489 5_1:-7592912 Msa0714790:intron
ACCTGATTGGCTATAATTGC+AGG 0.339845 5_1:+7592911 None:intergenic
TTATCATATAGACCCTTCTT+TGG 0.343475 5_1:+7597365 None:intergenic
TAAGATAGACATACCTCATA+TGG 0.343964 5_1:+7594883 None:intergenic
TGGTGATACTGATTCAATAA+TGG 0.344388 5_1:-7595451 Msa0714790:CDS
AGAGGCAAAACATTTGGTTT+TGG 0.352552 5_1:-7599002 Msa0714790:CDS
TATTGTTGATGATGTTCTTA+AGG 0.353234 5_1:-7603809 Msa0714790:CDS
TTGATATTGTCCGCCGTGAC+TGG 0.360851 5_1:-7594781 Msa0714790:CDS
GTAAAATGGGTCAGCATTCC+AGG 0.361669 5_1:+7599888 None:intergenic
TCAGGGACCGTTGTGCCTTT+GGG 0.365318 5_1:-7591956 Msa0714790:CDS
ATCTGTTGTCAGTTGCAATA+TGG 0.366117 5_1:-7600985 Msa0714790:CDS
TCAGGGATTGTGTCGTAGAT+AGG 0.366452 5_1:+7604159 None:intergenic
TCTTTCTCTTTCTTCCGTTT+AGG 0.367033 5_1:+7603976 None:intergenic
GGAGTGGTGGTGGTGGAGGC+GGG 0.368558 5_1:-7603315 Msa0714790:CDS
GAAAGATTATGGGGCCTTCA+TGG 0.369078 5_1:-7601319 Msa0714790:CDS
GATAGAAGAGGCAAAACATT+TGG 0.370717 5_1:-7599008 Msa0714790:CDS
GTCAAATACACTAGAGCAGC+TGG 0.373201 5_1:+7593072 None:intergenic
GCGAGGAGTGGTGGTGGTGG+AGG 0.373781 5_1:-7603319 Msa0714790:CDS
CTTTCTCCTTTGAGGTCTAC+TGG 0.374595 5_1:+7601690 None:intergenic
CTGATTAAAAGAAAGATTAT+GGG 0.374913 5_1:-7601329 Msa0714790:CDS
TGGTGGTGGTGGAGGCGGGG+AGG 0.377505 5_1:-7603311 Msa0714790:CDS
CAGAATAGGGTTAGGGTTAG+AGG 0.380241 5_1:-7603572 Msa0714790:CDS
CACCCTTTGGGATGCTGAGC+AGG 0.387444 5_1:+7601274 None:intergenic
TTACATACTTGATGCTTATG+AGG 0.387978 5_1:-7603218 Msa0714790:CDS
GCAAATAAAAGTGAGCTTGT+AGG 0.388083 5_1:+7593393 None:intergenic
GTTAGTAAGGATAAGGATAA+TGG 0.388300 5_1:-7603598 Msa0714790:CDS
TTGGCATCAGGATATGCTTC+GGG 0.389548 5_1:+7594159 None:intergenic
AAAGAAATATGCAGCTGTTA+AGG 0.389650 5_1:-7594926 Msa0714790:CDS
GCAAAACATCTGGTGGATTT+GGG 0.392144 5_1:-7602072 Msa0714790:CDS
GCGTAATTAGAAAACTTGTC+TGG 0.392510 5_1:+7597551 None:intergenic
TTAAATTAATAATACCTGAT+TGG 0.392668 5_1:+7592898 None:intergenic
AAGGTAATGAATGTGGTAAT+GGG 0.393385 5_1:-7603489 Msa0714790:CDS
AAACCCTCCTTCTTCACAAC+AGG 0.393683 5_1:+7603412 None:intergenic
AAGCAACAAGGTTACGCATC+TGG 0.394695 5_1:-7593997 Msa0714790:CDS
CAAATTATCCTCGCTGCAAC+GGG 0.402834 5_1:-7592482 Msa0714790:CDS
CTCTTCTTGGAGCTCGAAAC+AGG 0.403553 5_1:-7601659 Msa0714790:intron
GAAGGTAATGAATGTGGTAA+TGG 0.404228 5_1:-7603490 Msa0714790:CDS
TGGGTACTCTTTATTTGTTT+GGG 0.406598 5_1:-7603177 Msa0714790:CDS
TTTCAATTCATCCGGATGTC+TGG 0.407062 5_1:+7593764 None:intergenic
TTTAAATCTATTTGTATGTT+GGG 0.407317 5_1:-7593037 Msa0714790:CDS
AATGGATCCAGAATAGGGTT+AGG 0.408213 5_1:-7603580 Msa0714790:CDS
CGAATATAAGTGGCAACCTA+TGG 0.409541 5_1:-7597746 Msa0714790:CDS
AAGGATAATGGATCCAGAAT+AGG 0.412059 5_1:-7603586 Msa0714790:CDS
GGCTGCGTGCGGTGGCGTCA+GGG 0.413337 5_1:+7604259 None:intergenic
TGATTACTATTTGTCACAAC+AGG 0.415469 5_1:-7593712 Msa0714790:intron
TGGTCTTAAACGTCAGCAAC+TGG 0.417699 5_1:-7595976 Msa0714790:CDS
GAGCAACTTCCTTCCGAGAC+TGG 0.418315 5_1:+7598586 None:intergenic
CACTGAAGCTTACTGCCAAC+AGG 0.420094 5_1:-7595938 Msa0714790:intron
TCTGGCACGTAGAGCAATTC+CGG 0.420126 5_1:+7593782 None:intergenic
GTCTGAGGAAAGGGAGAAAC+CGG 0.420243 5_1:+7604023 None:intergenic
ATCAGCTGCTGCTGCTATGA+TGG 0.420633 5_1:-7603905 Msa0714790:CDS
ATGGATAGCGACGTTCTTGT+TGG 0.420903 5_1:-7599555 Msa0714790:CDS
CAGGAGAAATTCGAGACTCT+TGG 0.421109 5_1:+7602282 None:intergenic
ACTGTTATTCGCAAACTTGA+TGG 0.422114 5_1:-7599867 Msa0714790:CDS
TTTGGCATCAGGATATGCTT+CGG 0.422494 5_1:+7594158 None:intergenic
TGCGGTGGCGTCAGGGCCTC+GGG 0.422506 5_1:+7604266 None:intergenic
GCGGGATCGGAGAAGCTCTA+AGG 0.424097 5_1:+7604233 None:intergenic
GCGGCGAGGAGTGGTGGTGG+TGG 0.425341 5_1:-7603322 Msa0714790:CDS
TGCTTCCTATGCTGGAGGAC+TGG 0.425821 5_1:-7597396 Msa0714790:CDS
GGATGAATTGAAACGAGAAC+AGG 0.425921 5_1:-7593754 Msa0714790:CDS
TGCCACTTATATTCGTCAAC+TGG 0.426257 5_1:+7597754 None:intergenic
TGTTCTCGTTTCAATTCATC+CGG 0.430135 5_1:+7593756 None:intergenic
GGGCACAAGCCCTGAAAGAC+TGG 0.430349 5_1:-7593568 Msa0714790:CDS
AGATTCCTCCGCGCCTGAGC+TGG 0.431352 5_1:+7593000 None:intergenic
ATCTTGATGGTTTGTATAAG+AGG 0.431498 5_1:-7594966 Msa0714790:CDS
GCATCGATGAAAACTGCATC+TGG 0.432174 5_1:-7595996 Msa0714790:CDS
GGAAAGGGAGAAACCGGCTT+TGG 0.434356 5_1:+7604029 None:intergenic
GAGTGGTGGTGGTGGAGGCG+GGG 0.435920 5_1:-7603314 Msa0714790:CDS
TTTGTGGTGTGGTGGTGGAT+CGG 0.439967 5_1:+7604196 None:intergenic
TACGCATCTGGTTGCTCTGT+TGG 0.440562 5_1:-7593985 Msa0714790:CDS
ATTAGGTCAATAAGAAATAT+CGG 0.442964 5_1:-7595002 Msa0714790:intron
GATTTGGTCAGATTGAATAT+GGG 0.443341 5_1:-7597839 Msa0714790:intron
TACTGTTTGTTATATAGAAA+AGG 0.443509 5_1:-7592271 Msa0714790:intron
TGAATCTGGTAGGGTTAGTA+AGG 0.444264 5_1:-7603611 Msa0714790:CDS
TCGAAGTGTCAGCTTTCGTT+TGG 0.444477 5_1:-7592535 Msa0714790:CDS
TTTGCGAATAACAGTAAAAT+GGG 0.445477 5_1:+7599875 None:intergenic
TCGGGGACCGTTGGATCTGC+GGG 0.445487 5_1:+7604215 None:intergenic
TGCTCTACGTGCCAGACATC+CGG 0.446141 5_1:-7593775 Msa0714790:CDS
CCGAAGCTGTGTGCTACTGC+TGG 0.446268 5_1:-7603352 Msa0714790:CDS
GACGATGCAGATATTAATGA+TGG 0.446316 5_1:-7597470 Msa0714790:CDS
ACTGTCTTGTAGGTGATCTA+TGG 0.446979 5_1:-7595471 Msa0714790:intron
TTGCCTCTTCTATCGAGCTT+AGG 0.447488 5_1:+7599017 None:intergenic
TTAGATTGACACTCCTATGC+TGG 0.447945 5_1:-7599928 Msa0714790:intron
ACAGATTCAGCAGAGGGCTT+AGG 0.447951 5_1:+7603694 None:intergenic
GGGAAATTGCGAGGGAGGAA+TGG 0.451970 5_1:-7603518 Msa0714790:CDS
TTACGTAATTTGCTGTGAGC+AGG 0.452432 5_1:-7593950 Msa0714790:intron
TGTCAGTTGCAATATGGTTA+AGG 0.454054 5_1:-7600979 Msa0714790:intron
TTCACGGCGGCTAGCGACTA+AGG 0.454769 5_1:+7604122 None:intergenic
TGTCCCAAATGCTTTGAAAA+TGG 0.458655 5_1:-7592950 Msa0714790:CDS
GTAGAAGTGAACGAGAGTTT+GGG 0.460170 5_1:-7603538 Msa0714790:CDS
AAGGCGGTGTATTCTTCCTC+AGG 0.460226 5_1:+7604141 None:intergenic
AATGAAAAGCCAACCAGCTC+AGG 0.460850 5_1:-7593013 Msa0714790:CDS
AGAAGGAGTTGATCAAAATC+AGG 0.461010 5_1:-7592016 Msa0714790:CDS
AACAATCAGCCAGTCTTTCA+GGG 0.461161 5_1:+7593559 None:intergenic
CATCAACAATACAAAAGATC+AGG 0.461480 5_1:-7591974 Msa0714790:CDS
GAAAATAAATTATCCGTTCA+AGG 0.462515 5_1:-7601851 Msa0714790:intron
GATACTCCACCCTCTGTGCC+CGG 0.462539 5_1:+7597612 None:intergenic
CTTTGGGTGGGTGAAGCTGC+AGG 0.463270 5_1:-7591940 Msa0714790:CDS
TGGCACCTACTAGCTCCATC+AGG 0.463637 5_1:+7598526 None:intergenic
TGGCAGGCGGCGAGGAGTGG+TGG 0.464482 5_1:-7603328 Msa0714790:CDS
TTGCTTCATGTCAGGTCAAA+CGG 0.465105 5_1:-7592716 Msa0714790:intron
GGTGGTGGATCGGGGACCGT+TGG 0.467218 5_1:+7604206 None:intergenic
GACCGTTGGATCTGCGGGAT+CGG 0.467832 5_1:+7604220 None:intergenic
TAAGGCTTGGCTGCGTGCGG+TGG 0.469526 5_1:+7604251 None:intergenic
CTCAAGCTGTATCATCTCAC+TGG 0.469887 5_1:+7602313 None:intergenic
GCATATTCTTCTTACTTGTA+GGG 0.472531 5_1:+7595751 None:intergenic
AATATTATCAACCTGAATGA+TGG 0.472962 5_1:+7597304 None:intergenic
GGTGGAGTTTAATTTGGATC+CGG 0.473216 5_1:-7603257 Msa0714790:CDS
TTTATTGCTGTGACAACCAC+GGG 0.474541 5_1:+7601059 None:intergenic
GGGTGCCCGGGCACAGAGGG+TGG 0.475640 5_1:-7597618 Msa0714790:CDS
GTGTGCTACTGCTGGATGGC+AGG 0.476439 5_1:-7603344 Msa0714790:CDS
CGTCTTTGTGCATCAATTCA+GGG 0.477261 5_1:-7593588 Msa0714790:CDS
GGGTGTTTCTTCCTTTAGCA+TGG 0.477802 5_1:-7602052 Msa0714790:CDS
CAGGCGGCGAGGAGTGGTGG+TGG 0.478120 5_1:-7603325 Msa0714790:CDS
GGTGTATGATGCAGTATGTA+TGG 0.478407 5_1:-7595830 Msa0714790:intron
CAACGGGCATCTTAATAGAA+AGG 0.478556 5_1:-7592466 Msa0714790:intron
TGGTAGGGTTAGTAAGGATA+AGG 0.479278 5_1:-7603605 Msa0714790:CDS
TACTCTTTATTTGTTTGGGA+AGG 0.480288 5_1:-7603173 Msa0714790:intron
AGGATAATGGATCCAGAATA+GGG 0.480833 5_1:-7603585 Msa0714790:CDS
TTGATCAACTCCTTCTCTAT+CGG 0.481085 5_1:+7592023 None:intergenic
GAATTCTTCGTCTGAGGAAA+GGG 0.481178 5_1:+7604014 None:intergenic
AAAGTAAAATCTCACCCTTT+GGG 0.481239 5_1:+7601262 None:intergenic
TCTCTCTCTCTAACTAACTT+TGG 0.482357 5_1:+7604334 None:intergenic
TTTGAAACTTGTAGCCATGA+AGG 0.482549 5_1:+7601305 None:intergenic
GTTTAAATCTATTTGTATGT+TGG 0.483070 5_1:-7593038 Msa0714790:CDS
GATGGGAATATATTTCCAAT+GGG 0.483117 5_1:-7599849 Msa0714790:CDS
GGATGGCAGGCGGCGAGGAG+TGG 0.483658 5_1:-7603331 Msa0714790:CDS
AGTGTCAGCTTTCGTTTGGT+TGG 0.485403 5_1:-7592531 Msa0714790:CDS
CTGCCATCTAGTAAAACAAC+TGG 0.488033 5_1:-7597084 Msa0714790:CDS
AACGGATGCATGGTTGTCAA+TGG 0.488628 5_1:-7597814 Msa0714790:CDS
GGAAATGGTGAAATTGAATC+TGG 0.489046 5_1:-7603625 Msa0714790:CDS
CAGGGATTGTGTCGTAGATA+GGG 0.490591 5_1:+7604160 None:intergenic
GGGACCGTTGTGCCTTTGGG+TGG 0.492793 5_1:-7591953 Msa0714790:CDS
GAATGAGATAGCAAAACATC+TGG 0.492833 5_1:-7602082 Msa0714790:CDS
CTGTTATTCGCAAACTTGAT+GGG 0.493609 5_1:-7599866 Msa0714790:CDS
TCAGGGTGCCCGGGCACAGA+GGG 0.494045 5_1:-7597621 Msa0714790:intron
AAGATAGACATACCTCATAT+GGG 0.496561 5_1:+7594884 None:intergenic
GTTAAGGTGCAGTTTAAAGA+TGG 0.496764 5_1:-7594910 Msa0714790:CDS
TAAAGATGGCACCCCATATG+AGG 0.497321 5_1:-7594896 Msa0714790:intron
TATGTGGAGGCGAGACAAAA+AGG 0.497554 5_1:-7596018 Msa0714790:CDS
ATGCAGTATGTATGGATGCC+TGG 0.499882 5_1:-7595822 Msa0714790:intron
GAAGGTGAAAGATGAAGAAA+TGG 0.502003 5_1:-7603443 Msa0714790:CDS
ACCTCCTTATTGAATCCCAT+TGG 0.503054 5_1:+7599834 None:intergenic
AATGTTACAATTACACAAGA+TGG 0.503337 5_1:-7599574 Msa0714790:CDS
ACGGACAGAAACATAAAAGC+TGG 0.503896 5_1:-7599810 Msa0714790:CDS
CCTCTTGCAGATTCATCCTG+TGG 0.504937 5_1:-7593616 Msa0714790:intron
GAATATAAGTGGCAACCTAT+GGG 0.505148 5_1:-7597745 Msa0714790:CDS
GATGCAGCAAGATCAACTAT+TGG 0.505527 5_1:+7591993 None:intergenic
ATCGGGGACCGTTGGATCTG+CGG 0.507157 5_1:+7604214 None:intergenic
TGATGGGAATATATTTCCAA+TGG 0.508055 5_1:-7599850 Msa0714790:CDS
CTTAACAGGTGCCATGCTAA+AGG 0.509779 5_1:+7602041 None:intergenic
CCAAATTATCCTCGCTGCAA+CGG 0.510957 5_1:-7592483 Msa0714790:CDS
TCCTCCGCGCCTGAGCTGGT+TGG 0.511273 5_1:+7593004 None:intergenic
TCAGCTGCTGCTGCTATGAT+GGG 0.513932 5_1:-7603904 Msa0714790:CDS
CTCTAAGGCTTGGCTGCGTG+CGG 0.517974 5_1:+7604248 None:intergenic
GGACCGTTGTGCCTTTGGGT+GGG 0.518910 5_1:-7591952 Msa0714790:CDS
CTTCTGTTGTTAATGATGCA+CGG 0.519414 5_1:-7603729 Msa0714790:CDS
GAGTATTATGGAGCTAATAT+GGG 0.520407 5_1:-7603196 Msa0714790:CDS
GGTAATTCAGGCAGTGCGAC+CGG 0.520830 5_1:-7593801 Msa0714790:CDS
TCCTTCTGTTTCTTCTTCTG+CGG 0.521296 5_1:-7603935 Msa0714790:CDS
GATTTAACATGTACCTTGAA+CGG 0.521481 5_1:+7601838 None:intergenic
CGCCAGTTGACGAATATAAG+TGG 0.523406 5_1:-7597756 Msa0714790:CDS
GTAACTCATGGTGTCGATGA+TGG 0.523484 5_1:-7597500 Msa0714790:CDS
TGCTCACAGCAAATTACGTA+AGG 0.524220 5_1:+7593952 None:intergenic
AAAATTAAATGCAGGTATCA+GGG 0.524836 5_1:-7593121 Msa0714790:intron
TGATTCGAATAATCAACAAC+AGG 0.525264 5_1:-7603278 Msa0714790:CDS
CGAATTCTTCGTCTGAGGAA+AGG 0.527430 5_1:+7604013 None:intergenic
CTCCGATCCCGCAGATCCAA+CGG 0.528192 5_1:-7604222 Msa0714790:CDS
TCGGATTTGTGGTGTGGTGG+TGG 0.528454 5_1:+7604191 None:intergenic
TGGATTCACATATGAGCAGC+TGG 0.529303 5_1:+7591867 None:intergenic
ATCGGAGAAGCTCTAAGGCT+TGG 0.529462 5_1:+7604238 None:intergenic
TGTGGTGTGGTGGTGGATCG+GGG 0.529482 5_1:+7604198 None:intergenic
TCGACTCTCCTAAAGACATC+AGG 0.532688 5_1:-7601115 Msa0714790:CDS
GTGGCGTCAGGGCCTCGGGT+TGG 0.532874 5_1:+7604270 None:intergenic
AAAATCGGTAATGGTGGAAA+TGG 0.533719 5_1:-7603640 Msa0714790:CDS
GAAGAGGATTGGTCCAAAGC+CGG 0.533882 5_1:-7604042 Msa0714790:CDS
GTAGCTTGCAAGTGAAGCTA+TGG 0.535280 5_1:-7591828 Msa0714790:three_prime_UTR
CAACGACGAAGGCGAAGAAG+AGG 0.536508 5_1:-7604058 Msa0714790:CDS
GGATTTAGTTGAAGAGAAAG+TGG 0.536890 5_1:-7603467 Msa0714790:CDS
AACATAAATCAAGTGAAGCA+AGG 0.537301 5_1:-7593422 Msa0714790:CDS
CCAGCAGTAGCACACAGCTT+CGG 0.538281 5_1:+7603352 None:intergenic
TGTTCTTCTACACAGATCTC+AGG 0.538595 5_1:-7599505 Msa0714790:intron
TGAATGAGCGGGATTGTTCA+CGG 0.540528 5_1:+7604106 None:intergenic
ATGAATCTGAGAAACCTAAA+CGG 0.540915 5_1:-7603990 Msa0714790:CDS
ATGTGAATCCACACCAGCAA+GGG 0.541895 5_1:-7591855 Msa0714790:three_prime_UTR
AAAGGAATGAGACGATGATA+CGG 0.543087 5_1:+7604385 None:intergenic
AGTTGAAGAGAAAGTGGCGA+AGG 0.545397 5_1:-7603461 Msa0714790:CDS
AGTTTAGACCACATGCTGCT+TGG 0.545440 5_1:+7599065 None:intergenic
ATGGATCCAGAATAGGGTTA+GGG 0.546023 5_1:-7603579 Msa0714790:CDS
ATTTGGTCAGATTGAATATG+GGG 0.548172 5_1:-7597838 Msa0714790:intron
AAGTGTTACAGCCACATCCT+TGG 0.548464 5_1:-7591786 Msa0714790:three_prime_UTR
AGTGAAACCTGTTGTGAAGA+AGG 0.548709 5_1:-7603419 Msa0714790:CDS
TCAGATTGAATATGGGGAAA+CGG 0.550849 5_1:-7597832 Msa0714790:intron
GCTTCAGAGTGGAAGAGACC+TGG 0.555993 5_1:-7599906 Msa0714790:CDS
TTTGCGAAAATCGGTAATGG+TGG 0.556520 5_1:-7603646 Msa0714790:CDS
GAGGAACGGACAAGTAGCAT+TGG 0.557216 5_1:-7594217 Msa0714790:CDS
ACCAGATGGAGGCAAAGTCT+AGG 0.557445 5_1:-7592049 Msa0714790:intron
CCAAACTGCAAAATCCCTGA+TGG 0.557679 5_1:-7598541 Msa0714790:CDS
TTGCGAGGGAGGAATGGTGG+TGG 0.559049 5_1:-7603512 Msa0714790:CDS
ACGAAGGCGAAGAAGAGGAT+TGG 0.559926 5_1:-7604053 Msa0714790:CDS
AAATTGCGAGGGAGGAATGG+TGG 0.560222 5_1:-7603515 Msa0714790:CDS
CGAGAGTTTGGGAAATTGCG+AGG 0.560989 5_1:-7603527 Msa0714790:CDS
GAGGGAGGAATGGTGGTGGA+AGG 0.561630 5_1:-7603508 Msa0714790:CDS
TTCAGGGTGCCCGGGCACAG+AGG 0.562382 5_1:-7597622 Msa0714790:intron
TTGGTTGGTGATTCTGAGCG+AGG 0.562836 5_1:-7592516 Msa0714790:CDS
ATTCAATAATGGTTTACAGT+GGG 0.564097 5_1:-7595440 Msa0714790:CDS
ATCTCACTGGTTGAATGCAA+AGG 0.564618 5_1:+7602326 None:intergenic
AGTTTGGGAAATTGCGAGGG+AGG 0.564692 5_1:-7603523 Msa0714790:CDS
CTACCTGCTCAGCATCCCAA+AGG 0.565825 5_1:-7601277 Msa0714790:CDS
TTCGAGTCGGATTTGTGGTG+TGG 0.566330 5_1:+7604185 None:intergenic
CTGCTGGATGGCAGGCGGCG+AGG 0.567573 5_1:-7603336 Msa0714790:CDS
TTTAGGGCTTGACACATCAA+AGG 0.569052 5_1:-7593538 Msa0714790:intron
TAAAACCAGTCCTCCAGCAT+AGG 0.569330 5_1:+7597391 None:intergenic
CGATAAAATTAGTCGGAGGA+AGG 0.570214 5_1:-7603767 Msa0714790:CDS
TCAACTGGCGTGTGAGAGGA+AGG 0.570239 5_1:+7597769 None:intergenic
TGCTTACAAGAACATGTGGC+TGG 0.570497 5_1:+7594133 None:intergenic
ACATAAATCAAGTGAAGCAA+GGG 0.571452 5_1:-7593421 Msa0714790:CDS
TTCGTCAACTGGCGTGTGAG+AGG 0.573704 5_1:+7597765 None:intergenic
AATTCACAACTCTCTCATGA+AGG 0.573872 5_1:-7594589 Msa0714790:intron
TGGTGAAATTGAATCTGGTA+GGG 0.574580 5_1:-7603620 Msa0714790:CDS
TACAGGTACAAGAAGAAATG+AGG 0.575050 5_1:-7594236 Msa0714790:intron
CCTGATTGGCTATAATTGCA+GGG 0.575152 5_1:+7592912 None:intergenic
TCATGTCTTGTGTTGCCGGT+CGG 0.575514 5_1:-7598965 Msa0714790:CDS
ATACTCCACCCTCTGTGCCC+GGG 0.575516 5_1:+7597613 None:intergenic
TGAGATAGCAAAACATCTGG+TGG 0.576767 5_1:-7602079 Msa0714790:CDS
ATCTTGAATTGGAAAATCCC+AGG 0.577136 5_1:+7595804 None:intergenic
TTATCAACCTGAATGATGGA+AGG 0.578579 5_1:+7597308 None:intergenic
AAACACAGCTAAACCAGTCT+CGG 0.579714 5_1:-7598599 Msa0714790:CDS
TGAAACGAGAACAGGGGACA+TGG 0.581801 5_1:-7593746 Msa0714790:CDS
ATCTAAGAAAGTTATTCAAG+AGG 0.581875 5_1:-7595388 Msa0714790:intron
GAACGAACAGACATTCCTGC+AGG 0.583136 5_1:-7601889 Msa0714790:CDS
GTTGAATGCAAAGGATGACT+TGG 0.583266 5_1:+7602335 None:intergenic
ATGGTGAAATTGAATCTGGT+AGG 0.583731 5_1:-7603621 Msa0714790:CDS
CGAGCTTAGGCATTGTAGAA+CGG 0.587020 5_1:+7599030 None:intergenic
AAATGCTTTGAAAATGGTGT+TGG 0.587131 5_1:-7592944 Msa0714790:CDS
GGGATTCAATAAGGAGGTCA+CGG 0.588606 5_1:-7599829 Msa0714790:CDS
TGCAGTATGTATGGATGCCT+GGG 0.589761 5_1:-7595821 Msa0714790:intron
CGGACGACGACGGTTCAAGC+AGG 0.592274 5_1:-7604302 Msa0714790:CDS
AAACCTGTTGTGAAGAAGGA+GGG 0.592982 5_1:-7603415 Msa0714790:CDS
ATGTTCTGTGTGTTGAAAGC+AGG 0.593394 5_1:-7599782 Msa0714790:intron
TTATATCAACTACTTTGACA+TGG 0.593640 5_1:+7591679 None:intergenic
AGCAGCATGTGGTCTAAACT+GGG 0.594167 5_1:-7599062 Msa0714790:CDS
GTCATCAACGATGAATGAGC+GGG 0.594361 5_1:+7604095 None:intergenic
TACCTGCTCAGCATCCCAAA+GGG 0.596578 5_1:-7601276 Msa0714790:intron
TATGTGAATCCACACCAGCA+AGG 0.598097 5_1:-7591856 Msa0714790:three_prime_UTR
TGATTAAAAGAAAGATTATG+GGG 0.598291 5_1:-7601328 Msa0714790:CDS
GAGAGTTTGGGAAATTGCGA+GGG 0.598661 5_1:-7603526 Msa0714790:CDS
GATGAATTGAAACGAGAACA+GGG 0.599023 5_1:-7593753 Msa0714790:CDS
TCAAATACACTAGAGCAGCT+GGG 0.600689 5_1:+7593073 None:intergenic
TTCGAATAATCAACAACAGG+TGG 0.602453 5_1:-7603275 Msa0714790:CDS
GCATTGTAGAACGGTTGAGA+CGG 0.603416 5_1:+7599039 None:intergenic
GCAACACAAGACATGATAGC+AGG 0.603626 5_1:+7598972 None:intergenic
GGAGTTTAATTTGGATCCGG+AGG 0.604208 5_1:-7603254 Msa0714790:CDS
ATCAACAATACAAAAGATCA+GGG 0.606117 5_1:-7591973 Msa0714790:CDS
GTCTAGGATACCGATAGAGA+AGG 0.606628 5_1:-7592033 Msa0714790:CDS
AGGTAATGAATGTGGTAATG+GGG 0.606632 5_1:-7603488 Msa0714790:CDS
AGCTGTGTGCTACTGCTGGA+TGG 0.606720 5_1:-7603348 Msa0714790:CDS
CAAATAGATTTAAACACAGG+AGG 0.608118 5_1:+7593046 None:intergenic
GCCAACCAGCTCAGGCGCGG+AGG 0.609906 5_1:-7593005 Msa0714790:CDS
TGTTCTTAAGGAGTTTGCGC+CGG 0.609989 5_1:-7603797 Msa0714790:CDS
GCCCTAATGAACCAAGGATG+TGG 0.610279 5_1:+7591775 None:intergenic
ATGCCTAAGCTCGATAGAAG+AGG 0.610476 5_1:-7599020 Msa0714790:CDS
TTCATCGAATTCTTCGTCTG+AGG 0.611074 5_1:+7604008 None:intergenic
GTATCAGGGATGTGAGCCGT+TGG 0.611599 5_1:-7593107 Msa0714790:CDS
TCATTCATCGTTGATGACGA+CGG 0.611996 5_1:-7604090 Msa0714790:CDS
CGGACAGAAACATAAAAGCT+GGG 0.613037 5_1:-7599809 Msa0714790:CDS
TATCAACCTGAATGATGGAA+GGG 0.614557 5_1:+7597309 None:intergenic
AAAGCCAACCAGCTCAGGCG+CGG 0.614660 5_1:-7593008 Msa0714790:CDS
TGCTACTGCTGGATGGCAGG+CGG 0.615814 5_1:-7603341 Msa0714790:CDS
GATTCAATAATGGTTTACAG+TGG 0.616159 5_1:-7595441 Msa0714790:CDS
GAGTCGGATTTGTGGTGTGG+TGG 0.619057 5_1:+7604188 None:intergenic
GGCACCTACTAGCTCCATCA+GGG 0.619342 5_1:+7598527 None:intergenic
GTTTATTGCTGTGACAACCA+CGG 0.621887 5_1:+7601058 None:intergenic
ATATAAGTGGCAACCTATGG+GGG 0.622034 5_1:-7597743 Msa0714790:CDS
CCTAATACAGATTCAGCAGA+GGG 0.622330 5_1:+7603688 None:intergenic
CAAATACACTAGAGCAGCTG+GGG 0.622513 5_1:+7593074 None:intergenic
GTTAGAGAGAGAGATAGCAA+TGG 0.624642 5_1:-7604325 Msa0714790:exon
TTCCACTCTGAAGCCAGCAT+AGG 0.625498 5_1:+7599915 None:intergenic
ACAGCTAAACCAGTCTCGGA+AGG 0.627100 5_1:-7598595 Msa0714790:CDS
CGTATCACAAAGAAGCCGAC+CGG 0.627681 5_1:+7598950 None:intergenic
TCCAATGGGATTCAATAAGG+AGG 0.627800 5_1:-7599835 Msa0714790:CDS
GCATCAGGATATGCTTCGGG+TGG 0.628312 5_1:+7594162 None:intergenic
CTGGGGCATGACAAGACCAA+CGG 0.628948 5_1:+7593091 None:intergenic
AGAGAGAGAGATAGCAATGG+CGG 0.629559 5_1:-7604322 Msa0714790:exon
AATATAAGTGGCAACCTATG+GGG 0.633202 5_1:-7597744 Msa0714790:CDS
TTCTCGTGACCTATTAAAGG+AGG 0.634465 5_1:-7598919 Msa0714790:intron
ATACAAATAGATTTAAACAC+AGG 0.635070 5_1:+7593043 None:intergenic
ACTGTTGAAAGATCTTCAGA+TGG 0.637112 5_1:-7597120 Msa0714790:CDS
GAGTTTAATTTGGATCCGGA+GGG 0.637203 5_1:-7603253 Msa0714790:CDS
AAATAGATTTAAACACAGGA+GGG 0.637465 5_1:+7593047 None:intergenic
GCACAAAGACGTGATACCAC+AGG 0.638333 5_1:+7593600 None:intergenic
CTGATTGGCTATAATTGCAG+GGG 0.639371 5_1:+7592913 None:intergenic
CTGCAGCTTCACCCACCCAA+AGG 0.643038 5_1:+7591941 None:intergenic
GAAACCTGTTGTGAAGAAGG+AGG 0.644278 5_1:-7603416 Msa0714790:CDS
GTGCAGGTTATTGAACGCAA+AGG 0.646019 5_1:-7594806 Msa0714790:intron
ATGAGAACGATAAAATTAGT+CGG 0.646312 5_1:-7603774 Msa0714790:CDS
TGCGAAAGTTAGTGAAGAAG+TGG 0.646437 5_1:-7603380 Msa0714790:CDS
CTCCTATGCTGGCTTCAGAG+TGG 0.647589 5_1:-7599917 Msa0714790:CDS
TCCTGCAGGTGAAAATTATG+TGG 0.651566 5_1:-7601875 Msa0714790:CDS
ACGAAGCGCAGAGTAACTCA+TGG 0.652101 5_1:-7597512 Msa0714790:CDS
GCTGCTGCTGCTATGATGGG+CGG 0.653414 5_1:-7603901 Msa0714790:CDS
AAGGCTGCTTCCTATGCTGG+AGG 0.654029 5_1:-7597401 Msa0714790:CDS
AATATGGGGAAACGGATGCA+TGG 0.654495 5_1:-7597824 Msa0714790:CDS
GCACAAAGATTGAAGCAACA+AGG 0.655471 5_1:-7594009 Msa0714790:CDS
ACCTAATACAGATTCAGCAG+AGG 0.656263 5_1:+7603687 None:intergenic
AGGCGGTGTATTCTTCCTCA+GGG 0.659119 5_1:+7604142 None:intergenic
TGTGAATCCACACCAGCAAG+GGG 0.659943 5_1:-7591854 Msa0714790:three_prime_UTR
GTAGAGTACCAAGCAGCATG+TGG 0.661892 5_1:-7599073 Msa0714790:CDS
ATAGCAATGGCGGACGACGA+CGG 0.663375 5_1:-7604312 Msa0714790:exon
GCCGCAGAAGAAGAAACAGA+AGG 0.664871 5_1:+7603934 None:intergenic
TTGATAATTAGGTCAAAACA+GGG 0.665318 5_1:-7602418 Msa0714790:intron
AGATAGACATACCTCATATG+GGG 0.667153 5_1:+7594885 None:intergenic
GCACTTCCAGTAGACCTCAA+AGG 0.668563 5_1:-7601696 Msa0714790:CDS
GGATTTGGTTACAACGACGA+AGG 0.669813 5_1:-7604069 Msa0714790:CDS
TCGCTAACAAGCTCCAGTCA+CGG 0.670367 5_1:+7594768 None:intergenic
ACGGCGGCTAGCGACTAAGG+CGG 0.677032 5_1:+7604125 None:intergenic
TCACCCACCCAAAGGCACAA+CGG 0.680987 5_1:+7591949 None:intergenic
GTGGTGGAAGGTAATGAATG+TGG 0.681054 5_1:-7603496 Msa0714790:CDS
CGTCATCAACGATGAATGAG+CGG 0.681351 5_1:+7604094 None:intergenic
AGAACGATAAAATTAGTCGG+AGG 0.683785 5_1:-7603771 Msa0714790:CDS
GAAAGTTAGTGAAGAAGTGG+TGG 0.684121 5_1:-7603377 Msa0714790:CDS
ATTTCTGCCCTAATGAACCA+AGG 0.686252 5_1:+7591769 None:intergenic
GCTCACAGCAAATTACGTAA+GGG 0.686272 5_1:+7593953 None:intergenic
ATTGCTGTGACAACCACGGG+GGG 0.688758 5_1:+7601062 None:intergenic
GTACAAGAAGAAATGAGGAA+CGG 0.689471 5_1:-7594231 Msa0714790:CDS
AGGAAGCGAAGACCAACCCG+AGG 0.691054 5_1:-7604282 Msa0714790:CDS
TCCGTGCTTACAAGAACATG+TGG 0.705974 5_1:+7594129 None:intergenic
AACAACTGGAGTCTTGCCAG+AGG 0.707117 5_1:-7597070 Msa0714790:intron
TTGCTGGTGATGATGATGAG+AGG 0.707281 5_1:-7593374 Msa0714790:intron
AGGGTAATGAGCTCAGCCAG+CGG 0.714806 5_1:+7595770 None:intergenic
TTGTTGTGAAGAACATGCAG+AGG 0.717304 5_1:-7602373 Msa0714790:CDS
ATGAATTGAAACGAGAACAG+GGG 0.730709 5_1:-7593752 Msa0714790:CDS
TTATTGCTGTGACAACCACG+GGG 0.731047 5_1:+7601060 None:intergenic
GTGAATCCACACCAGCAAGG+GGG 0.741409 5_1:-7591853 Msa0714790:three_prime_UTR
TATTGCTGTGACAACCACGG+GGG 0.742494 5_1:+7601061 None:intergenic
TTAAGATGCCCGTTGCAGCG+AGG 0.757926 5_1:+7592474 None:intergenic
TATCTACGACACAATCCCTG+AGG 0.775199 5_1:-7604157 Msa0714790:CDS
ATCTGTGTAGAAGAACATCG+AGG 0.780391 5_1:+7599511 None:intergenic
CTAACAAGCTCCAGTCACGG+CGG 0.808047 5_1:+7594771 None:intergenic
ATGAGCGGGATTGTTCACGG+CGG 0.843893 5_1:+7604109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTAGAAATTTCAGAA+AGG + chr5_1:7591639-7591658 None:intergenic 20.0%
!! CAAATATTTGTATTGTTCTA+TGG + chr5_1:7604287-7604306 None:intergenic 20.0%
!!! AAAAATTTCATCTTCACTTT+TGG - chr5_1:7604361-7604380 Msa0714790:five_prime_UTR 20.0%
! TTATATCAACTACTTTGACA+TGG + chr5_1:7604327-7604346 None:intergenic 25.0%
GTTGTTGCAATTTAAATTGC+AGG - chr5_1:7604091-7604110 Msa0714790:CDS 30.0%
TCTCTCTCTCTAACTAACTT+TGG + chr5_1:7591672-7591691 None:intergenic 35.0%
TCAACTACTTTGACATGGTT+TGG + chr5_1:7604322-7604341 None:intergenic 35.0%
ATTTCTGCCCTAATGAACCA+AGG + chr5_1:7604237-7604256 None:intergenic 40.0%
GCAGCTGGACAAACTGAATT+TGG + chr5_1:7604124-7604143 None:intergenic 45.0%
TGGATTCACATATGAGCAGC+TGG + chr5_1:7604139-7604158 None:intergenic 45.0%
TATGTGAATCCACACCAGCA+AGG - chr5_1:7604147-7604166 Msa0714790:CDS 45.0%
ATGTGAATCCACACCAGCAA+GGG - chr5_1:7604148-7604167 Msa0714790:CDS 45.0%
! GTAGCTTGCAAGTGAAGCTA+TGG - chr5_1:7604175-7604194 Msa0714790:CDS 45.0%
AAGTGTTACAGCCACATCCT+TGG - chr5_1:7604217-7604236 Msa0714790:CDS 45.0%
AGCCACATCCTTGGTTCATT+AGG - chr5_1:7604226-7604245 Msa0714790:CDS 45.0%
GCCACATCCTTGGTTCATTA+GGG - chr5_1:7604227-7604246 Msa0714790:CDS 45.0%
TGTGAATCCACACCAGCAAG+GGG - chr5_1:7604149-7604168 Msa0714790:CDS 50.0%
GCCCTAATGAACCAAGGATG+TGG + chr5_1:7604231-7604250 None:intergenic 50.0%
GTGAATCCACACCAGCAAGG+GGG - chr5_1:7604150-7604169 Msa0714790:CDS 55.0%
CTACAACCCCCTTGCTGGTG+TGG + chr5_1:7604159-7604178 None:intergenic 60.0%
GCAAGCTACAACCCCCTTGC+TGG + chr5_1:7604164-7604183 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 7591620 7604405 7591620 ID=Msa0714790;Name=Msa0714790
chr5_1 mRNA 7591620 7604405 7591620 ID=Msa0714790-mRNA-1;Parent=Msa0714790;Name=Msa0714790-mRNA-1;_AED=0.10;_eAED=0.10;_QI=77|1|1|1|1|1|31|300|1544
chr5_1 exon 7591620 7592066 7591620 ID=Msa0714790-mRNA-1:exon:3210;Parent=Msa0714790-mRNA-1
chr5_1 exon 7592272 7592346 7592272 ID=Msa0714790-mRNA-1:exon:3209;Parent=Msa0714790-mRNA-1
chr5_1 exon 7592467 7592586 7592467 ID=Msa0714790-mRNA-1:exon:3208;Parent=Msa0714790-mRNA-1
chr5_1 exon 7592671 7592724 7592671 ID=Msa0714790-mRNA-1:exon:3207;Parent=Msa0714790-mRNA-1
chr5_1 exon 7592913 7593129 7592913 ID=Msa0714790-mRNA-1:exon:3206;Parent=Msa0714790-mRNA-1
chr5_1 exon 7593375 7593448 7593375 ID=Msa0714790-mRNA-1:exon:3205;Parent=Msa0714790-mRNA-1
chr5_1 exon 7593539 7593628 7593539 ID=Msa0714790-mRNA-1:exon:3204;Parent=Msa0714790-mRNA-1
chr5_1 exon 7593713 7593826 7593713 ID=Msa0714790-mRNA-1:exon:3203;Parent=Msa0714790-mRNA-1
chr5_1 exon 7593951 7594034 7593951 ID=Msa0714790-mRNA-1:exon:3202;Parent=Msa0714790-mRNA-1
chr5_1 exon 7594140 7594253 7594140 ID=Msa0714790-mRNA-1:exon:3201;Parent=Msa0714790-mRNA-1
chr5_1 exon 7594590 7594635 7594590 ID=Msa0714790-mRNA-1:exon:3200;Parent=Msa0714790-mRNA-1
chr5_1 exon 7594725 7594822 7594725 ID=Msa0714790-mRNA-1:exon:3199;Parent=Msa0714790-mRNA-1
chr5_1 exon 7594897 7595019 7594897 ID=Msa0714790-mRNA-1:exon:3198;Parent=Msa0714790-mRNA-1
chr5_1 exon 7595389 7595481 7595389 ID=Msa0714790-mRNA-1:exon:3197;Parent=Msa0714790-mRNA-1
chr5_1 exon 7595598 7595654 7595598 ID=Msa0714790-mRNA-1:exon:3196;Parent=Msa0714790-mRNA-1
chr5_1 exon 7595766 7595838 7595766 ID=Msa0714790-mRNA-1:exon:3195;Parent=Msa0714790-mRNA-1
chr5_1 exon 7595939 7596057 7595939 ID=Msa0714790-mRNA-1:exon:3194;Parent=Msa0714790-mRNA-1
chr5_1 exon 7597071 7597163 7597071 ID=Msa0714790-mRNA-1:exon:3193;Parent=Msa0714790-mRNA-1
chr5_1 exon 7597316 7597639 7597316 ID=Msa0714790-mRNA-1:exon:3192;Parent=Msa0714790-mRNA-1
chr5_1 exon 7597731 7597850 7597731 ID=Msa0714790-mRNA-1:exon:3191;Parent=Msa0714790-mRNA-1
chr5_1 exon 7598536 7598649 7598536 ID=Msa0714790-mRNA-1:exon:3190;Parent=Msa0714790-mRNA-1
chr5_1 exon 7598920 7599099 7598920 ID=Msa0714790-mRNA-1:exon:3189;Parent=Msa0714790-mRNA-1
chr5_1 exon 7599506 7599620 7599506 ID=Msa0714790-mRNA-1:exon:3188;Parent=Msa0714790-mRNA-1
chr5_1 exon 7599783 7599946 7599783 ID=Msa0714790-mRNA-1:exon:3187;Parent=Msa0714790-mRNA-1
chr5_1 exon 7600980 7601165 7600980 ID=Msa0714790-mRNA-1:exon:3186;Parent=Msa0714790-mRNA-1
chr5_1 exon 7601277 7601367 7601277 ID=Msa0714790-mRNA-1:exon:3185;Parent=Msa0714790-mRNA-1
chr5_1 exon 7601660 7601724 7601660 ID=Msa0714790-mRNA-1:exon:3184;Parent=Msa0714790-mRNA-1
chr5_1 exon 7601852 7601926 7601852 ID=Msa0714790-mRNA-1:exon:3183;Parent=Msa0714790-mRNA-1
chr5_1 exon 7602041 7602124 7602041 ID=Msa0714790-mRNA-1:exon:3182;Parent=Msa0714790-mRNA-1
chr5_1 exon 7602259 7602429 7602259 ID=Msa0714790-mRNA-1:exon:3181;Parent=Msa0714790-mRNA-1
chr5_1 exon 7603174 7604405 7603174 ID=Msa0714790-mRNA-1:exon:3180;Parent=Msa0714790-mRNA-1
chr5_1 five_prime_UTR 7604329 7604405 7604329 ID=Msa0714790-mRNA-1:five_prime_utr;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7603174 7604328 7603174 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7602259 7602429 7602259 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7602041 7602124 7602041 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7601852 7601926 7601852 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7601660 7601724 7601660 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7601277 7601367 7601277 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7600980 7601165 7600980 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7599783 7599946 7599783 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7599506 7599620 7599506 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7598920 7599099 7598920 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7598536 7598649 7598536 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7597731 7597850 7597731 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7597316 7597639 7597316 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7597071 7597163 7597071 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7595939 7596057 7595939 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7595766 7595838 7595766 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7595598 7595654 7595598 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7595389 7595481 7595389 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7594897 7595019 7594897 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7594725 7594822 7594725 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7594590 7594635 7594590 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7594140 7594253 7594140 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7593951 7594034 7593951 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7593713 7593826 7593713 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7593539 7593628 7593539 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7593375 7593448 7593375 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7592913 7593129 7592913 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7592671 7592724 7592671 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7592467 7592586 7592467 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7592272 7592346 7592272 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 CDS 7591920 7592066 7591920 ID=Msa0714790-mRNA-1:cds;Parent=Msa0714790-mRNA-1
chr5_1 three_prime_UTR 7591620 7591919 7591620 ID=Msa0714790-mRNA-1:three_prime_utr;Parent=Msa0714790-mRNA-1
Gene Sequence

>Msa0714790

ATGGCGGACGACGACGGTTCAAGCAGGAAGCGAAGACCAACCCGAGGCCCTGACGCCACCGCACGCAGCCAAGCCTTAGAGCTTCTCCGATCCCGCAGATCCAACGGTCCCCGATCCACCACCACACCACAAATCCGACTCGAAAACCCTATCTACGACACAATCCCTGAGGAAGAATACACCGCCTTAGTCGCTAGCCGCCGTGAACAATCCCGCTCATTCATCGTTGATGACGACGGATTTGGTTACAACGACGAAGGCGAAGAAGAGGATTGGTCCAAAGCCGGTTTCTCCCTTTCCTCAGACGAAGAATTCGATGAATCTGAGAAACCTAAACGGAAGAAAGAGAAAGACGCTTCGCAGATCAAGCGTCCTTCTGTTTCTTCTTCTGCGGCTAAATTATCAGCTGCTGCTGCTATGATGGGCGGATCAAGAGTTTCGTCGATGTTTACTTCTGCTAATTTTAAGAAAAGTAGAGATGATAAGGTTTGTGAGAGTATTGTTGATGATGTTCTTAAGGAGTTTGCGCCGGATGAGAACGATAAAATTAGTCGGAGGAAGGTTCAATCGAATTCGTCTTCTGTTGTTAATGATGCACGGATTAAGGCTAAACCTAAGCCCTCTGCTGAATCTGTATTAGGTTCTTACGCGAGTGAAAATTTTGCGAAAATCGGTAATGGTGGAAATGGTGAAATTGAATCTGGTAGGGTTAGTAAGGATAAGGATAATGGATCCAGAATAGGGTTAGGGTTAGAGGAAAAGAGTGAAGTAGAAGTGAACGAGAGTTTGGGAAATTGCGAGGGAGGAATGGTGGTGGAAGGTAATGAATGTGGTAATGGGGATTTAGTTGAAGAGAAAGTGGCGAAGGTGAAAGATGAAGAAATGGAAGTGAAACCTGTTGTGAAGAAGGAGGGTTTTACTTTGAATGCGAAAGTTAGTGAAGAAGTGGTGGATCCGAAGCTGTGTGCTACTGCTGGATGGCAGGCGGCGAGGAGTGGTGGTGGTGGAGGCGGGGAGGTAAATGTCGCTGATTCGAATAATCAACAACAGGTGGAGTTTAATTTGGATCCGGAGGGATCGTTGCCTTTTTACATACTTGATGCTTATGAGGAGTATTATGGAGCTAATATGGGTACTCTTTATTTGTTTGGGAAGGTCAAAACAGGGACTTTGTATCAGAGTTGCTGTGTTGTTGTGAAGAACATGCAGAGGTGTGTCTATGCAATTCCAAGTCATCCTTTGCATTCAACCAGTGAGATGATACAGCTTGAGAAAGATGTCCAAGAGTCTCGAATTTCTCCTGCAGATTTCCGTAAAAAGCTGCAAGATGCAGTATCTGATACAAAGAATGAGATAGCAAAACATCTGGTGGATTTGGGTGTTTCTTCCTTTAGCATGGCACCTGTTAAGAGGAAATATGCATTTGAACGAACAGACATTCCTGCAGGTGAAAATTATGTGGTGAAAATAAATTATCCGTTCAAGGATACGGCACTTCCAGTAGACCTCAAAGGAGAAAGTTTCTGTGCTCTTCTTGGAGCTCGAAACAGTGCACTTGAGTTATTTCTGATTAAAAGAAAGATTATGGGGCCTTCATGGCTACAAGTTTCAAACTTTTCTACCTGCTCAGCATCCCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTCGACTCTCCTAAAGACATCAGGAATTCTTCTTCAAAAATCACTCGAGTGACTCCCCCCGTGGTTGTCACAGCAATAAACTTGAAGACCACCATAAATGAAAAACAGAACATAAATGAAATTGTATCTGCATCTGTTGTCAGTTGCAATATGGTTAAGATTGACACTCCTATGCTGGCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGCAAACTTGATGGGAATATATTTCCAATGGGATTCAATAAGGAGGTCACGGACAGAAACATAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTCTAATGTTACAATTACACAAGATGGATAGCGACGTTCTTGTTGGACATAATATTTCTGGATTCGACCTCGATGTTCTTCTACACAGATCTCAGGCTTGTAGAGTACCAAGCAGCATGTGGTCTAAACTGGGCCGTCTCAACCGTTCTACAATGCCTAAGCTCGATAGAAGAGGCAAAACATTTGGTTTTGGAGCTGATCCTGCTATCATGTCTTGTGTTGCCGGTCGGCTTCTTTGTGATACGTATTTATGTTCTCGTGACCTATTAAAGGAGGTTAGCTATTCTTTAACTCACCTTGCAAAAACACAGCTAAACCAGTCTCGGAAGGAAGTTGCTCCAAATGAAGTTCCAAAAATGTTCCAAACTGCAAAATCCCTGATGGAGCTAATTGAATATGGGGAAACGGATGCATGGTTGTCAATGGAACTCATGTTTTATTTGAGTGTCCTTCCTCTCACACGCCAGTTGACGAATATAAGTGGCAACCTATGGGGGAAAACTCTTCAGGGTGCCCGGGCACAGAGGGTGGAGTATCTTTTGTTGCATGAATTCCATAATAAGAAATATATTGTTCCAGACAAGTTTTCTAATTACGCAAAAGAAACAAAATTGACGAAGCGCAGAGTAACTCATGGTGTCGATGATGGCAACTTTGACGATGCAGATATTAATGATGGAAACTATCATAATGATGCTTCTGAAAGTGATCATAAGAAAAACAAAAAGGCTGCTTCCTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATATGATAAATACATATTACTTCTGGACTTCAACAGTCTATACCCTTCCATCATTCAGGAATATAATATCTGCTTCACAACTGTTGAAAGATCTTCAGATGGATCTTTTCCTCGTCTGCCATCTAGTAAAACAACTGGAGTCTTGCCAGAGTTGCTGAAAAAACTGGTTATGTGGAGGCGAGACAAAAAGGCATCGATGAAAACTGCATCTGGTCTTAAACGTCAGCAACTGGACATTCAGCAGCAAGCACTGAAGCTTACTGCCAACAGTATGTATGGATGCCTGGGATTTTCCAATTCAAGATTTTATGCAAAACCGCTGGCTGAGCTCATTACCCTACAAGGAAGGGAGATACTACAAAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTGATCTATGGTGATACTGATTCAATAATGGTTTACAGTGGGCTAGATGATATTGCAAAAGCACATTCAATATCTAAGAAAGTTATTCAAGAGGTCAATAAGAAATATCGGTGCTTAGAAATTGATCTTGATGGTTTGTATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTTAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTGTTAGCGAAAGATTTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGCGAAGATGTCGTCGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCATTGGAAAAATACGTCATCACAAAGACATTGACTAAACCACCCGAAGCATATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACGCATCTGGTTGCTCTGTTGGCGATACAATCCCTTACGTAATTTGCTGTGAGCAGGGCGGTAATTCAGGCAGTGCGACCGGAATTGCTCTACGTGCCAGACATCCGGATGAATTGAAACGAGAACAGGGGACATGGCTAATTGATATTGATTACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGCACAAGCCCTGAAAGACTGGCTGATTGTTTAGGGCTTGACACATCAAAGTTTCAACATAAATCAAGTGAAGCAAGGGATGATCCTACAAGCTCACTTTTATTTGCTGGTGATGATGATGAGAGGTATCAGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCTAGTGTATTTGACTGCCCTCCTGTGTTTAAATCTATTTGTATGTTGGGAAATGAAAAGCCAACCAGCTCAGGCGCGGAGGAATCTGACTACAATTTCTGGCGCAAGCTGTGCTGTCCCAAATGCTTTGAAAATGGTGTTGGTAGAATTTCCCCTGCAATTATAGCCAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTTTAATGTATTATAGAGGTTTACTAATTTGTGACGATGAAACGTGTAAGCATACAACTCGAAGTGTCAGCTTTCGTTTGGTTGGTGATTCTGAGCGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGTACACTGAAGCGGACTTGTACAAGCAGCTCTCATATTTTTGTCATGTGTTTGATACTGTTTGTTATATAGAAAAGATGGAGGCAAAGTCTAGGATACCGATAGAGAAGGAGTTGATCAAAATCAGGCCAATAGTTGATCTTGCTGCATCAACAATACAAAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAAGCTGCAGGATCTAGTTGTTGCAATTTAA

Protein sequence

>Msa0714790

MADDDGSSRKRRPTRGPDATARSQALELLRSRRSNGPRSTTTPQIRLENPIYDTIPEEEYTALVASRREQSRSFIVDDDGFGYNDEGEEEDWSKAGFSLSSDEEFDESEKPKRKKEKDASQIKRPSVSSSAAKLSAAAAMMGGSRVSSMFTSANFKKSRDDKVCESIVDDVLKEFAPDENDKISRRKVQSNSSSVVNDARIKAKPKPSAESVLGSYASENFAKIGNGGNGEIESGRVSKDKDNGSRIGLGLEEKSEVEVNESLGNCEGGMVVEGNECGNGDLVEEKVAKVKDEEMEVKPVVKKEGFTLNAKVSEEVVDPKLCATAGWQAARSGGGGGGEVNVADSNNQQQVEFNLDPEGSLPFYILDAYEEYYGANMGTLYLFGKVKTGTLYQSCCVVVKNMQRCVYAIPSHPLHSTSEMIQLEKDVQESRISPADFRKKLQDAVSDTKNEIAKHLVDLGVSSFSMAPVKRKYAFERTDIPAGENYVVKINYPFKDTALPVDLKGESFCALLGARNSALELFLIKRKIMGPSWLQVSNFSTCSASQRVSWCKFEVTVDSPKDIRNSSSKITRVTPPVVVTAINLKTTINEKQNINEIVSASVVSCNMVKIDTPMLASEWKRPGMLTHFTVIRKLDGNIFPMGFNKEVTDRNIKAGSNVLCVESSERALLNRLMLQLHKMDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWSKLGRLNRSTMPKLDRRGKTFGFGADPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPNEVPKMFQTAKSLMELIEYGETDAWLSMELMFYLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHEFHNKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNFDDADINDGNYHNDASESDHKKNKKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLKKLVMWRRDKKASMKTASGLKRQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKAHSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYASGCSVGDTIPYVICCEQGGNSGSATGIALRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEARDDPTSSLLFAGDDDERYQGCEPLVLSCPSCSSVFDCPPVFKSICMLGNEKPTSSGAEESDYNFWRKLCCPKCFENGVGRISPAIIANQVKRQAEKFVLMYYRGLLICDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI*