AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0343010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0343010 MtrunA17_Chr5g0402061 96.124 1548 54 3 1 1544 1 1546 0.0 3001
Msa0343010 MtrunA17_Chr3g0130421 26.941 657 395 14 676 1306 370 967 4.58e-54 207
Msa0343010 MtrunA17_Chr7g0272751 22.617 703 415 17 663 1294 1207 1851 1.55e-25 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0343010 AT5G67100.2 60.437 1557 568 19 1 1542 1 1524 0.0 1844
Msa0343010 AT5G67100.1 60.437 1557 568 19 1 1542 1 1524 0.0 1844
Msa0343010 AT5G63960.1 27.340 673 391 17 654 1294 360 966 2.93e-52 202
Msa0343010 AT5G63960.2 27.246 668 382 17 659 1294 388 983 1.04e-51 200
Msa0343010 AT1G67500.1 23.585 742 413 26 636 1294 1072 1742 1.48e-28 126
Msa0343010 AT1G67500.6 23.585 742 413 26 636 1294 1072 1742 1.51e-28 126
Msa0343010 AT1G67500.7 23.649 740 411 26 638 1294 1099 1767 1.61e-28 125
Msa0343010 AT1G67500.2 23.649 740 411 26 638 1294 1099 1767 1.61e-28 125
Msa0343010 AT1G67500.5 23.585 742 413 26 636 1294 1071 1741 1.80e-28 125
Msa0343010 AT1G67500.3 23.585 742 413 26 636 1294 1071 1741 1.80e-28 125
Msa0343010 AT1G67500.4 25.214 583 310 20 638 1147 1073 1602 3.87e-27 121

Find 392 sgRNAs with CRISPR-Local

Find 838 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTGGACATAATATTTC+TGG 0.126294 3_1:-1040792 Msa0343010:CDS
TCTACATGAATTTACTTTAA+AGG 0.136282 3_1:+1032860 None:intergenic
AAACAATCAGCCAGTCTTTC+AGG 0.154926 3_1:+1034804 None:intergenic
TCTGATTAAAAGAAAGATTA+TGG 0.164125 3_1:-1042582 Msa0343010:CDS
GAACAATATATTTCTTATTA+TGG 0.176581 3_1:+1038827 None:intergenic
ACAACAGGTGGAGTTTAATT+TGG 0.179273 3_1:-1044518 Msa0343010:CDS
TGATTTGGTCAGATTGAATA+TGG 0.185539 3_1:-1039094 Msa0343010:intron
TGGCTGCGTGCGGTGGCGTC+AGG 0.206165 3_1:+1045513 None:intergenic
TAAAATTAAATGCAGGTATC+AGG 0.216098 3_1:-1034368 Msa0343010:intron
CAAATATTTGTATTGTTCTA+TGG 0.228019 3_1:+1032965 None:intergenic
ATGGGTACTCTTTATTTGTT+TGG 0.229127 3_1:-1044433 Msa0343010:CDS
GGAGTATTATGGAGCTAATA+TGG 0.230146 3_1:-1044452 Msa0343010:CDS
CTCTAACCCTAACCCTATTC+TGG 0.242766 3_1:+1044828 None:intergenic
ATGTTCTCGTGACCTATTAA+AGG 0.243064 3_1:-1040174 Msa0343010:CDS
AGCAAAACATCTGGTGGATT+TGG 0.247808 3_1:-1043328 Msa0343010:CDS
GAAAGACTGGCTGATTGTTT+AGG 0.257739 3_1:-1034801 Msa0343010:CDS
GTTTGCGAATAACAGTAAAA+TGG 0.261527 3_1:+1041126 None:intergenic
TCAAAATAACTTGAATTTAG+AGG 0.262421 3_1:-1036851 Msa0343010:intron
AATAATTTACCTCCTTTAAT+AGG 0.262800 3_1:+1040162 None:intergenic
AGGAATCTGACTACAATTTC+TGG 0.268580 3_1:-1034231 Msa0343010:CDS
AAAGACTGGCTGATTGTTTA+GGG 0.269262 3_1:-1034800 Msa0343010:CDS
TGTTAATGATGCACGGATTA+AGG 0.273941 3_1:-1044977 Msa0343010:CDS
GATGCTTATGAGGAGTATTA+TGG 0.274878 3_1:-1044463 Msa0343010:CDS
GAAGAATTCCTGATGTCTTT+AGG 0.282882 3_1:+1042359 None:intergenic
GTGCGGTGGCGTCAGGGCCT+CGG 0.284382 3_1:+1045520 None:intergenic
TTGTGGTGTGGTGGTGGATC+GGG 0.285272 3_1:+1045452 None:intergenic
GAAAGTTTCTGTGCTCTTCT+TGG 0.291535 3_1:-1042924 Msa0343010:CDS
AGCCACATCCTTGGTTCATT+AGG 0.293116 3_1:-1033023 Msa0343010:three_prime_UTR
AGGAGTGGTGGTGGTGGAGG+CGG 0.298671 3_1:-1044571 Msa0343010:CDS
GTTAATCAGCAAACCTTAAC+AGG 0.301188 3_1:+1043282 None:intergenic
AGTAGAAGTGAACGAGAGTT+TGG 0.303680 3_1:-1044794 Msa0343010:CDS
TCTATACCCTTCCATCATTC+AGG 0.304023 3_1:-1038569 Msa0343010:intron
CCCTCTGCTAAATCTGTATT+AGG 0.307683 3_1:-1044943 Msa0343010:CDS
ATCGTTGATGACGACGGATT+TGG 0.310489 3_1:-1045339 Msa0343010:CDS
CCGTTGCAGCGAGGATAATT+TGG 0.311908 3_1:+1033729 None:intergenic
CTTTAGCATGGCACCTGTTA+AGG 0.311942 3_1:-1043295 Msa0343010:intron
GCAGCTGGACAAACTGAATT+TGG 0.315705 3_1:+1033128 None:intergenic
ACGTCTTTGTGCATCAATTC+AGG 0.315817 3_1:-1034835 Msa0343010:CDS
GTTGTTGCAATTTAAATTGC+AGG 0.317319 3_1:-1033158 Msa0343010:exon
CACAGAAACTTTCTCCTTTG+AGG 0.318146 3_1:+1042934 None:intergenic
GCCACATCCTTGGTTCATTA+GGG 0.318541 3_1:-1033022 Msa0343010:three_prime_UTR
GCTATCATGTCTTGTGTTGC+CGG 0.318803 3_1:-1040221 Msa0343010:CDS
TTTGAGTAGGGCGGTAATTC+AGG 0.320292 3_1:-1035059 Msa0343010:intron
AGCTTGTTAGCGAAAGATTT+AGG 0.323341 3_1:-1036004 Msa0343010:CDS
ATCAGGGACCGTTGTGCCTT+TGG 0.325476 3_1:-1033203 Msa0343010:CDS
TCAACTACTTTGACATGGTT+TGG 0.325686 3_1:+1032930 None:intergenic
ATTTCCAATGGGATTCAATA+AGG 0.326657 3_1:-1041090 Msa0343010:CDS
TAAGAAAAGTAGAGATGATA+AGG 0.328138 3_1:-1045097 Msa0343010:CDS
TAAGCATCAAGTATGTAAAA+AGG 0.331553 3_1:+1044478 None:intergenic
AAGCAGCATGTGGTCTAAAC+TGG 0.332642 3_1:-1040315 Msa0343010:CDS
TGATAAATACATATTACTTC+TGG 0.334762 3_1:-1038602 Msa0343010:CDS
GTTGATAATTAGGTCAAAAC+AGG 0.337171 3_1:-1043674 Msa0343010:intron
TGCTTAGAAATTGATCTTGA+TGG 0.337619 3_1:-1036225 Msa0343010:CDS
CCCTGCAATTATAGCCAATC+AGG 0.338489 3_1:-1034158 Msa0343010:intron
ACCTGATTGGCTATAATTGC+AGG 0.339845 3_1:+1034157 None:intergenic
TTATCATATAGACCCTTCTT+TGG 0.343475 3_1:+1038619 None:intergenic
TAAGATAGACATACCTCATA+TGG 0.343964 3_1:+1036129 None:intergenic
TGGTGATACTGATTCAATAA+TGG 0.344388 3_1:-1036705 Msa0343010:CDS
AGAGGCAAAACATTTGGTTT+TGG 0.352552 3_1:-1040254 Msa0343010:CDS
TATTGTTGATGATGTTCTTA+AGG 0.353234 3_1:-1045064 Msa0343010:CDS
TTGATATTGTCCGCCGTGAC+TGG 0.360851 3_1:-1036027 Msa0343010:CDS
GTAAAATGGGTCAGCATTCC+AGG 0.361669 3_1:+1041140 None:intergenic
TCAGGGACCGTTGTGCCTTT+GGG 0.365318 3_1:-1033202 Msa0343010:CDS
ATCTGTTGTCAGTTGCAATA+TGG 0.366117 3_1:-1042237 Msa0343010:CDS
TCAGGGATTGTGTCGTAGAT+AGG 0.366452 3_1:+1045414 None:intergenic
TCTTTCTCTTTCTTCCGTTT+AGG 0.367033 3_1:+1045231 None:intergenic
GGAGTGGTGGTGGTGGAGGC+GGG 0.368558 3_1:-1044570 Msa0343010:CDS
GAAAGATTATGGGGCCTTCA+TGG 0.369078 3_1:-1042571 Msa0343010:CDS
GATAGAAGAGGCAAAACATT+TGG 0.370717 3_1:-1040260 Msa0343010:CDS
GTCAAATACACTAGAGCAGC+TGG 0.373201 3_1:+1034318 None:intergenic
GCGAGGAGTGGTGGTGGTGG+AGG 0.373781 3_1:-1044574 Msa0343010:CDS
CTTTCTCCTTTGAGGTCTAC+TGG 0.374595 3_1:+1042942 None:intergenic
CTGATTAAAAGAAAGATTAT+GGG 0.374913 3_1:-1042581 Msa0343010:CDS
TGGTGGTGGTGGAGGCGGGG+AGG 0.377505 3_1:-1044566 Msa0343010:CDS
CAGAATAGGGTTAGGGTTAG+AGG 0.380241 3_1:-1044827 Msa0343010:CDS
CACCCTTTGGGATGCTGAGC+AGG 0.387444 3_1:+1042526 None:intergenic
TTACATACTTGATGCTTATG+AGG 0.387978 3_1:-1044473 Msa0343010:CDS
GCAAATAAAAGTGAGCTTGT+AGG 0.388083 3_1:+1034639 None:intergenic
GTTAGTAAGGATAAGGATAA+TGG 0.388300 3_1:-1044853 Msa0343010:CDS
TTGGCATCAGGATATGCTTC+GGG 0.389548 3_1:+1035403 None:intergenic
AAAGAAATATGCAGCTGTTA+AGG 0.389650 3_1:-1036172 Msa0343010:CDS
GCAAAACATCTGGTGGATTT+GGG 0.392144 3_1:-1043327 Msa0343010:CDS
GCGTAATTAGAAAACTTGTC+TGG 0.392510 3_1:+1038805 None:intergenic
GCAAGCTACAACACCCTTGC+TGG 0.392663 3_1:+1033088 None:intergenic
TTAAATTAATAATACCTGAT+TGG 0.392668 3_1:+1034144 None:intergenic
AAGGTAATGAATGTGGTAAT+GGG 0.393385 3_1:-1044744 Msa0343010:CDS
AAACCCTCCTTCTTCACAAC+AGG 0.393683 3_1:+1044667 None:intergenic
AAGCAACAAGGTTACGCATC+TGG 0.394695 3_1:-1035243 Msa0343010:CDS
CAAATTATCCTCGCTGCAAC+GGG 0.402834 3_1:-1033728 Msa0343010:CDS
CTCTTCTTGGAGCTCGAAAC+AGG 0.403553 3_1:-1042911 Msa0343010:intron
GAAGGTAATGAATGTGGTAA+TGG 0.404228 3_1:-1044745 Msa0343010:CDS
TGGGTACTCTTTATTTGTTT+GGG 0.406598 3_1:-1044432 Msa0343010:CDS
TTTCAATTCATCCGGATGTC+TGG 0.407062 3_1:+1035010 None:intergenic
TTTAAATCTATTTGTATGTT+GGG 0.407317 3_1:-1034283 Msa0343010:CDS
AATGGATCCAGAATAGGGTT+AGG 0.408213 3_1:-1044835 Msa0343010:CDS
CGAATATAAGTGGCAACCTA+TGG 0.409541 3_1:-1039000 Msa0343010:CDS
AAGGATAATGGATCCAGAAT+AGG 0.412059 3_1:-1044841 Msa0343010:CDS
GGCTGCGTGCGGTGGCGTCA+GGG 0.413337 3_1:+1045514 None:intergenic
TGATTACTATTTGTCACAAC+AGG 0.415469 3_1:-1034958 Msa0343010:intron
TGGTCTTAAACGTCAGCAAC+TGG 0.417699 3_1:-1037230 Msa0343010:CDS
GAGCAACTTCCTTCCGAGAC+TGG 0.418315 3_1:+1039840 None:intergenic
CACTGAAGCTTACTGCCAAC+AGG 0.420094 3_1:-1037192 Msa0343010:intron
TCTGGCACGTAGAGCAATTC+CGG 0.420126 3_1:+1035028 None:intergenic
GTCTGAGGAAAGGGAGAAAC+CGG 0.420243 3_1:+1045278 None:intergenic
ATCAGCTGCTGCTGCTATGA+TGG 0.420633 3_1:-1045160 Msa0343010:CDS
ATGGATAGCGACGTTCTTGT+TGG 0.420903 3_1:-1040807 Msa0343010:CDS
CAGGAGAAATTCGAGACTCT+TGG 0.421109 3_1:+1043537 None:intergenic
ACTGTTATTCGCAAACTTGA+TGG 0.422114 3_1:-1041119 Msa0343010:CDS
TTTGGCATCAGGATATGCTT+CGG 0.422494 3_1:+1035402 None:intergenic
TGCGGTGGCGTCAGGGCCTC+GGG 0.422506 3_1:+1045521 None:intergenic
GCGGGATCGGAGAAGCTCTA+AGG 0.424097 3_1:+1045488 None:intergenic
GCGGCGAGGAGTGGTGGTGG+TGG 0.425341 3_1:-1044577 Msa0343010:CDS
TGCTTCCTATGCTGGAGGAC+TGG 0.425821 3_1:-1038650 Msa0343010:CDS
GGATGAATTGAAACGAGAAC+AGG 0.425921 3_1:-1035000 Msa0343010:CDS
TGCCACTTATATTCGTCAAC+TGG 0.426257 3_1:+1039008 None:intergenic
TGTTCTCGTTTCAATTCATC+CGG 0.430135 3_1:+1035002 None:intergenic
GGGCACAAGCCCTGAAAGAC+TGG 0.430349 3_1:-1034814 Msa0343010:CDS
AGATTCCTCCGCGCCTGAGC+TGG 0.431352 3_1:+1034246 None:intergenic
ATCTTGATGGTTTGTATAAG+AGG 0.431498 3_1:-1036212 Msa0343010:CDS
GCATCGATGAAAACTGCATC+TGG 0.432174 3_1:-1037250 Msa0343010:CDS
GGAAAGGGAGAAACCGGCTT+TGG 0.434356 3_1:+1045284 None:intergenic
GAGTGGTGGTGGTGGAGGCG+GGG 0.435920 3_1:-1044569 Msa0343010:CDS
TTTGTGGTGTGGTGGTGGAT+CGG 0.439967 3_1:+1045451 None:intergenic
TACGCATCTGGTTGCTCTGT+TGG 0.440562 3_1:-1035231 Msa0343010:CDS
ATTAGGTCAATAAGAAATAT+CGG 0.442964 3_1:-1036248 Msa0343010:intron
GATTTGGTCAGATTGAATAT+GGG 0.443341 3_1:-1039093 Msa0343010:intron
TACTGTTTGTTATATAGAAA+AGG 0.443509 3_1:-1033517 Msa0343010:intron
TGAATCTGGTAGGGTTAGTA+AGG 0.444264 3_1:-1044866 Msa0343010:CDS
TCGAAGTGTCAGCTTTCGTT+TGG 0.444477 3_1:-1033781 Msa0343010:CDS
TTTGCGAATAACAGTAAAAT+GGG 0.445477 3_1:+1041127 None:intergenic
TCGGGGACCGTTGGATCTGC+GGG 0.445487 3_1:+1045470 None:intergenic
TGCTCTACGTGCCAGACATC+CGG 0.446141 3_1:-1035021 Msa0343010:CDS
CCGAAGCTGTGTGCTACTGC+TGG 0.446268 3_1:-1044607 Msa0343010:CDS
GACGATGCAGATATTAATGA+TGG 0.446316 3_1:-1038724 Msa0343010:CDS
ACTGTCTTGTAGGTGATCTA+TGG 0.446979 3_1:-1036725 Msa0343010:intron
TTGCCTCTTCTATCGAGCTT+AGG 0.447488 3_1:+1040269 None:intergenic
TTAGATTGACACTCCTATGC+TGG 0.447945 3_1:-1041180 Msa0343010:intron
GGGAAATTGCGAGGGAGGAA+TGG 0.451970 3_1:-1044773 Msa0343010:CDS
TTACGTAATTTGCTGTGAGC+AGG 0.452432 3_1:-1035196 Msa0343010:intron
TGTCAGTTGCAATATGGTTA+AGG 0.454054 3_1:-1042231 Msa0343010:intron
TTCACGGCGGCTAGCGACTA+AGG 0.454769 3_1:+1045377 None:intergenic
TGTCCCAAATGCTTTGAAAA+TGG 0.458655 3_1:-1034196 Msa0343010:CDS
GTAGAAGTGAACGAGAGTTT+GGG 0.460170 3_1:-1044793 Msa0343010:CDS
AAGGCGGTGTATTCTTCCTC+AGG 0.460226 3_1:+1045396 None:intergenic
AATGAAAAGCCAACCAGCTC+AGG 0.460850 3_1:-1034259 Msa0343010:CDS
AGAAGGAGTTGATCAAAATC+AGG 0.461010 3_1:-1033262 Msa0343010:CDS
AACAATCAGCCAGTCTTTCA+GGG 0.461161 3_1:+1034805 None:intergenic
CATCAACAATACAAAAGATC+AGG 0.461480 3_1:-1033220 Msa0343010:CDS
GAAAATAAATTATCCGTTCA+AGG 0.462515 3_1:-1043106 Msa0343010:intron
GATACTCCACCCTCTGTGCC+CGG 0.462539 3_1:+1038866 None:intergenic
CTTTGGGTGGGTGAAGCTGC+AGG 0.463270 3_1:-1033186 Msa0343010:CDS
TGGCACCTACTAGCTCCATC+AGG 0.463637 3_1:+1039780 None:intergenic
TGGCAGGCGGCGAGGAGTGG+TGG 0.464482 3_1:-1044583 Msa0343010:CDS
ACAGATTTAGCAGAGGGCTT+AGG 0.465092 3_1:+1044949 None:intergenic
TTGCTTCATGTCAGGTCAAA+CGG 0.465105 3_1:-1033962 Msa0343010:intron
GGTGGTGGATCGGGGACCGT+TGG 0.467218 3_1:+1045461 None:intergenic
GACCGTTGGATCTGCGGGAT+CGG 0.467832 3_1:+1045475 None:intergenic
TAAGGCTTGGCTGCGTGCGG+TGG 0.469526 3_1:+1045506 None:intergenic
CTCAAGCTGTATCATCTCAC+TGG 0.469887 3_1:+1043568 None:intergenic
GCATATTCTTCTTACTTGTA+GGG 0.472531 3_1:+1037005 None:intergenic
AATATTATCAACCTGAATGA+TGG 0.472962 3_1:+1038558 None:intergenic
GGTGGAGTTTAATTTGGATC+CGG 0.473216 3_1:-1044512 Msa0343010:CDS
TTTATTGCTGTGACAACCAC+GGG 0.474541 3_1:+1042311 None:intergenic
GGGTGCCCGGGCACAGAGGG+TGG 0.475640 3_1:-1038872 Msa0343010:CDS
GTGTGCTACTGCTGGATGGC+AGG 0.476439 3_1:-1044599 Msa0343010:CDS
CGTCTTTGTGCATCAATTCA+GGG 0.477261 3_1:-1034834 Msa0343010:CDS
GGGTGTTTCTTCCTTTAGCA+TGG 0.477802 3_1:-1043307 Msa0343010:CDS
CAGGCGGCGAGGAGTGGTGG+TGG 0.478120 3_1:-1044580 Msa0343010:CDS
GGTGTATGATGCAGTATGTA+TGG 0.478407 3_1:-1037084 Msa0343010:intron
CAACGGGCATCTTAATAGAA+AGG 0.478556 3_1:-1033712 Msa0343010:intron
TGGTAGGGTTAGTAAGGATA+AGG 0.479278 3_1:-1044860 Msa0343010:CDS
TACTCTTTATTTGTTTGGGA+AGG 0.480288 3_1:-1044428 Msa0343010:intron
AGGATAATGGATCCAGAATA+GGG 0.480833 3_1:-1044840 Msa0343010:CDS
TTGATCAACTCCTTCTCTAT+CGG 0.481085 3_1:+1033269 None:intergenic
GAATTCTTCGTCTGAGGAAA+GGG 0.481178 3_1:+1045269 None:intergenic
AAAGTAAAATCTCACCCTTT+GGG 0.481239 3_1:+1042514 None:intergenic
TCTCTCTCTCTAACTAACTT+TGG 0.482357 3_1:+1045591 None:intergenic
TTTGAAACTTGTAGCCATGA+AGG 0.482549 3_1:+1042557 None:intergenic
GTTTAAATCTATTTGTATGT+TGG 0.483070 3_1:-1034284 Msa0343010:CDS
GATGGGAATATATTTCCAAT+GGG 0.483117 3_1:-1041101 Msa0343010:CDS
GGATGGCAGGCGGCGAGGAG+TGG 0.483658 3_1:-1044586 Msa0343010:CDS
AGTGTCAGCTTTCGTTTGGT+TGG 0.485403 3_1:-1033777 Msa0343010:CDS
CTGCCATCTAGTAAAACAAC+TGG 0.488033 3_1:-1038338 Msa0343010:CDS
AACGGATGCATGGTTGTCAA+TGG 0.488628 3_1:-1039068 Msa0343010:CDS
GGAAATGGTGAAATTGAATC+TGG 0.489046 3_1:-1044880 Msa0343010:CDS
CAGGGATTGTGTCGTAGATA+GGG 0.490591 3_1:+1045415 None:intergenic
GGGACCGTTGTGCCTTTGGG+TGG 0.492793 3_1:-1033199 Msa0343010:CDS
GAATGAGATAGCAAAACATC+TGG 0.492833 3_1:-1043337 Msa0343010:CDS
CTGTTATTCGCAAACTTGAT+GGG 0.493609 3_1:-1041118 Msa0343010:CDS
TCAGGGTGCCCGGGCACAGA+GGG 0.494045 3_1:-1038875 Msa0343010:intron
AAGATAGACATACCTCATAT+GGG 0.496561 3_1:+1036130 None:intergenic
GTTAAGGTGCAGTTTAAAGA+TGG 0.496764 3_1:-1036156 Msa0343010:CDS
TAAAGATGGCACCCCATATG+AGG 0.497321 3_1:-1036142 Msa0343010:intron
TATGTGGAGGCGAGACAAAA+AGG 0.497554 3_1:-1037272 Msa0343010:CDS
ATGCAGTATGTATGGATGCC+TGG 0.499882 3_1:-1037076 Msa0343010:intron
GAAGGTGAAAGATGAAGAAA+TGG 0.502003 3_1:-1044698 Msa0343010:CDS
ACCTCCTTATTGAATCCCAT+TGG 0.503054 3_1:+1041086 None:intergenic
AATGTTACAATTACACAAGA+TGG 0.503337 3_1:-1040826 Msa0343010:CDS
ACGGACAGAAACATAAAAGC+TGG 0.503896 3_1:-1041062 Msa0343010:CDS
CCTCTTGCAGATTCATCCTG+TGG 0.504937 3_1:-1034862 Msa0343010:intron
GAATATAAGTGGCAACCTAT+GGG 0.505148 3_1:-1038999 Msa0343010:CDS
GATGCAGCAAGATCAACTAT+TGG 0.505527 3_1:+1033239 None:intergenic
ATCGGGGACCGTTGGATCTG+CGG 0.507157 3_1:+1045469 None:intergenic
TGATGGGAATATATTTCCAA+TGG 0.508055 3_1:-1041102 Msa0343010:CDS
CTTAACAGGTGCCATGCTAA+AGG 0.509779 3_1:+1043296 None:intergenic
CCAAATTATCCTCGCTGCAA+CGG 0.510957 3_1:-1033729 Msa0343010:CDS
TCCTCCGCGCCTGAGCTGGT+TGG 0.511273 3_1:+1034250 None:intergenic
TCAGCTGCTGCTGCTATGAT+GGG 0.513932 3_1:-1045159 Msa0343010:CDS
CTACAACACCCTTGCTGGTG+TGG 0.516499 3_1:+1033093 None:intergenic
CTCTAAGGCTTGGCTGCGTG+CGG 0.517974 3_1:+1045503 None:intergenic
GGACCGTTGTGCCTTTGGGT+GGG 0.518910 3_1:-1033198 Msa0343010:CDS
CTTCTGTTGTTAATGATGCA+CGG 0.519414 3_1:-1044984 Msa0343010:CDS
GAGTATTATGGAGCTAATAT+GGG 0.520407 3_1:-1044451 Msa0343010:CDS
GGTAATTCAGGCAGTGCGAC+CGG 0.520830 3_1:-1035047 Msa0343010:CDS
TCCTTCTGTTTCTTCTTCTG+CGG 0.521296 3_1:-1045190 Msa0343010:CDS
GATTTAACATGTACCTTGAA+CGG 0.521481 3_1:+1043093 None:intergenic
CGCCAGTTGACGAATATAAG+TGG 0.523406 3_1:-1039010 Msa0343010:CDS
GTAACTCATGGTGTCGATGA+TGG 0.523484 3_1:-1038754 Msa0343010:CDS
TGCTCACAGCAAATTACGTA+AGG 0.524220 3_1:+1035198 None:intergenic
AAAATTAAATGCAGGTATCA+GGG 0.524836 3_1:-1034367 Msa0343010:intron
TGATTCGAATAATCAACAAC+AGG 0.525264 3_1:-1044533 Msa0343010:CDS
CGAATTCTTCGTCTGAGGAA+AGG 0.527430 3_1:+1045268 None:intergenic
CTCCGATCCCGCAGATCCAA+CGG 0.528192 3_1:-1045477 Msa0343010:CDS
TCGGATTTGTGGTGTGGTGG+TGG 0.528454 3_1:+1045446 None:intergenic
TGGATTCACATATGAGCAGC+TGG 0.529303 3_1:+1033113 None:intergenic
ATCGGAGAAGCTCTAAGGCT+TGG 0.529462 3_1:+1045493 None:intergenic
TGTGGTGTGGTGGTGGATCG+GGG 0.529482 3_1:+1045453 None:intergenic
TCGACTCTCCTAAAGACATC+AGG 0.532688 3_1:-1042367 Msa0343010:CDS
GTGGCGTCAGGGCCTCGGGT+TGG 0.532874 3_1:+1045525 None:intergenic
AAAATCGGTAATGGTGGAAA+TGG 0.533719 3_1:-1044895 Msa0343010:CDS
GAAGAGGATTGGTCCAAAGC+CGG 0.533882 3_1:-1045297 Msa0343010:CDS
CAACGACGAAGGCGAAGAAG+AGG 0.536508 3_1:-1045313 Msa0343010:CDS
GGATTTAGTTGAAGAGAAAG+TGG 0.536890 3_1:-1044722 Msa0343010:CDS
AACATAAATCAAGTGAAGCA+AGG 0.537301 3_1:-1034668 Msa0343010:CDS
CCAGCAGTAGCACACAGCTT+CGG 0.538281 3_1:+1044607 None:intergenic
TGTTCTTCTACACAGATCTC+AGG 0.538595 3_1:-1040757 Msa0343010:intron
TGAATGAGCGGGATTGTTCA+CGG 0.540528 3_1:+1045361 None:intergenic
ATGAATCTGAGAAACCTAAA+CGG 0.540915 3_1:-1045245 Msa0343010:CDS
AAAGGAATGAGACGATGATA+CGG 0.543087 3_1:+1045642 None:intergenic
AGTTGAAGAGAAAGTGGCGA+AGG 0.545397 3_1:-1044716 Msa0343010:CDS
AGTTTAGACCACATGCTGCT+TGG 0.545440 3_1:+1040317 None:intergenic
ATGGATCCAGAATAGGGTTA+GGG 0.546023 3_1:-1044834 Msa0343010:CDS
ATTTGGTCAGATTGAATATG+GGG 0.548172 3_1:-1039092 Msa0343010:intron
AAGTGTTACAGCCACATCCT+TGG 0.548464 3_1:-1033032 Msa0343010:three_prime_UTR
AGTGAAACCTGTTGTGAAGA+AGG 0.548709 3_1:-1044674 Msa0343010:CDS
TCAGATTGAATATGGGGAAA+CGG 0.550849 3_1:-1039086 Msa0343010:intron
GTAGCTTGCAAGTGAAGCTA+TGG 0.555937 3_1:-1033074 Msa0343010:three_prime_UTR
GCTTCAGAGTGGAAGAGACC+TGG 0.555993 3_1:-1041158 Msa0343010:CDS
TTTGCGAAAATCGGTAATGG+TGG 0.556520 3_1:-1044901 Msa0343010:CDS
GAGGAACGGACAAGTAGCAT+TGG 0.557216 3_1:-1035461 Msa0343010:CDS
ACCAGATGGAGGCAAAGTCT+AGG 0.557445 3_1:-1033295 Msa0343010:intron
CCAAACTGCAAAATCCCTGA+TGG 0.557679 3_1:-1039795 Msa0343010:CDS
TTGCGAGGGAGGAATGGTGG+TGG 0.559049 3_1:-1044767 Msa0343010:CDS
ACGAAGGCGAAGAAGAGGAT+TGG 0.559926 3_1:-1045308 Msa0343010:CDS
AAATTGCGAGGGAGGAATGG+TGG 0.560222 3_1:-1044770 Msa0343010:CDS
CGAGAGTTTGGGAAATTGCG+AGG 0.560989 3_1:-1044782 Msa0343010:CDS
GAGGGAGGAATGGTGGTGGA+AGG 0.561630 3_1:-1044763 Msa0343010:CDS
TTCAGGGTGCCCGGGCACAG+AGG 0.562382 3_1:-1038876 Msa0343010:intron
TTGGTTGGTGATTCTGAGCG+AGG 0.562836 3_1:-1033762 Msa0343010:CDS
ATTCAATAATGGTTTACAGT+GGG 0.564097 3_1:-1036694 Msa0343010:CDS
ATCTCACTGGTTGAATGCAA+AGG 0.564618 3_1:+1043581 None:intergenic
AGTTTGGGAAATTGCGAGGG+AGG 0.564692 3_1:-1044778 Msa0343010:CDS
CTACCTGCTCAGCATCCCAA+AGG 0.565825 3_1:-1042529 Msa0343010:CDS
TTCGAGTCGGATTTGTGGTG+TGG 0.566330 3_1:+1045440 None:intergenic
CTGCTGGATGGCAGGCGGCG+AGG 0.567573 3_1:-1044591 Msa0343010:CDS
TTTAGGGCTTGACACATCAA+AGG 0.569052 3_1:-1034784 Msa0343010:intron
TAAAACCAGTCCTCCAGCAT+AGG 0.569330 3_1:+1038645 None:intergenic
CGATAAAATTAGTCGGAGGA+AGG 0.570214 3_1:-1045022 Msa0343010:CDS
TCAACTGGCGTGTGAGAGGA+AGG 0.570239 3_1:+1039023 None:intergenic
TGCTTACAAGAACATGTGGC+TGG 0.570497 3_1:+1035377 None:intergenic
ACATAAATCAAGTGAAGCAA+GGG 0.571452 3_1:-1034667 Msa0343010:CDS
CCTAATACAGATTTAGCAGA+GGG 0.572437 3_1:+1044943 None:intergenic
TTCGTCAACTGGCGTGTGAG+AGG 0.573704 3_1:+1039019 None:intergenic
AATTCACAACTCTCTCATGA+AGG 0.573872 3_1:-1035835 Msa0343010:intron
TGGTGAAATTGAATCTGGTA+GGG 0.574580 3_1:-1044875 Msa0343010:CDS
TACAGGTACAAGAAGAAATG+AGG 0.575050 3_1:-1035480 Msa0343010:intron
CCTGATTGGCTATAATTGCA+GGG 0.575152 3_1:+1034158 None:intergenic
TCATGTCTTGTGTTGCCGGT+CGG 0.575514 3_1:-1040217 Msa0343010:CDS
ATACTCCACCCTCTGTGCCC+GGG 0.575516 3_1:+1038867 None:intergenic
TGAGATAGCAAAACATCTGG+TGG 0.576767 3_1:-1043334 Msa0343010:CDS
ATCTTGAATTGGAAAATCCC+AGG 0.577136 3_1:+1037058 None:intergenic
TTATCAACCTGAATGATGGA+AGG 0.578579 3_1:+1038562 None:intergenic
AAACACAGCTAAACCAGTCT+CGG 0.579714 3_1:-1039853 Msa0343010:CDS
TGAAACGAGAACAGGGGACA+TGG 0.581801 3_1:-1034992 Msa0343010:CDS
ATCTAAGAAAGTTATTCAAG+AGG 0.581875 3_1:-1036642 Msa0343010:intron
GAACGAACAGACATTCCTGC+AGG 0.583136 3_1:-1043144 Msa0343010:CDS
GTTGAATGCAAAGGATGACT+TGG 0.583266 3_1:+1043590 None:intergenic
ATGGTGAAATTGAATCTGGT+AGG 0.583731 3_1:-1044876 Msa0343010:CDS
CGAGCTTAGGCATTGTAGAA+CGG 0.587020 3_1:+1040282 None:intergenic
AAATGCTTTGAAAATGGTGT+TGG 0.587131 3_1:-1034190 Msa0343010:CDS
ATGTGAATCCACACCAGCAA+GGG 0.588318 3_1:-1033101 Msa0343010:three_prime_UTR
GGGATTCAATAAGGAGGTCA+CGG 0.588606 3_1:-1041081 Msa0343010:CDS
TGCAGTATGTATGGATGCCT+GGG 0.589761 3_1:-1037075 Msa0343010:intron
CGGACGACGACGGTTCAAGC+AGG 0.592274 3_1:-1045557 Msa0343010:CDS
AAACCTGTTGTGAAGAAGGA+GGG 0.592982 3_1:-1044670 Msa0343010:CDS
ATGTTCTGTGTGTTGAAAGC+AGG 0.593394 3_1:-1041034 Msa0343010:intron
TTATATCAACTACTTTGACA+TGG 0.593640 3_1:+1032925 None:intergenic
AGCAGCATGTGGTCTAAACT+GGG 0.594167 3_1:-1040314 Msa0343010:CDS
GTCATCAACGATGAATGAGC+GGG 0.594361 3_1:+1045350 None:intergenic
TACCTGCTCAGCATCCCAAA+GGG 0.596578 3_1:-1042528 Msa0343010:intron
TGATTAAAAGAAAGATTATG+GGG 0.598291 3_1:-1042580 Msa0343010:CDS
GAGAGTTTGGGAAATTGCGA+GGG 0.598661 3_1:-1044781 Msa0343010:CDS
GATGAATTGAAACGAGAACA+GGG 0.599023 3_1:-1034999 Msa0343010:CDS
TCAAATACACTAGAGCAGCT+GGG 0.600689 3_1:+1034319 None:intergenic
TTCGAATAATCAACAACAGG+TGG 0.602453 3_1:-1044530 Msa0343010:CDS
GCATTGTAGAACGGTTGAGA+CGG 0.603416 3_1:+1040291 None:intergenic
GCAACACAAGACATGATAGC+AGG 0.603626 3_1:+1040224 None:intergenic
GGAGTTTAATTTGGATCCGG+AGG 0.604208 3_1:-1044509 Msa0343010:CDS
ATCAACAATACAAAAGATCA+GGG 0.606117 3_1:-1033219 Msa0343010:CDS
GTCTAGGATACCGATAGAGA+AGG 0.606628 3_1:-1033279 Msa0343010:CDS
AGGTAATGAATGTGGTAATG+GGG 0.606632 3_1:-1044743 Msa0343010:CDS
AGCTGTGTGCTACTGCTGGA+TGG 0.606720 3_1:-1044603 Msa0343010:CDS
CAAATAGATTTAAACACAGG+AGG 0.608118 3_1:+1034292 None:intergenic
GCCAACCAGCTCAGGCGCGG+AGG 0.609906 3_1:-1034251 Msa0343010:CDS
TGTTCTTAAGGAGTTTGCGC+CGG 0.609989 3_1:-1045052 Msa0343010:CDS
GCCCTAATGAACCAAGGATG+TGG 0.610279 3_1:+1033021 None:intergenic
ATGCCTAAGCTCGATAGAAG+AGG 0.610476 3_1:-1040272 Msa0343010:CDS
TTCATCGAATTCTTCGTCTG+AGG 0.611074 3_1:+1045263 None:intergenic
GTATCAGGGATGTGAGCCGT+TGG 0.611599 3_1:-1034353 Msa0343010:CDS
TCATTCATCGTTGATGACGA+CGG 0.611996 3_1:-1045345 Msa0343010:CDS
CGGACAGAAACATAAAAGCT+GGG 0.613037 3_1:-1041061 Msa0343010:CDS
TATCAACCTGAATGATGGAA+GGG 0.614557 3_1:+1038563 None:intergenic
AAAGCCAACCAGCTCAGGCG+CGG 0.614660 3_1:-1034254 Msa0343010:CDS
TGCTACTGCTGGATGGCAGG+CGG 0.615814 3_1:-1044596 Msa0343010:CDS
GATTCAATAATGGTTTACAG+TGG 0.616159 3_1:-1036695 Msa0343010:CDS
GAGTCGGATTTGTGGTGTGG+TGG 0.619057 3_1:+1045443 None:intergenic
GGCACCTACTAGCTCCATCA+GGG 0.619342 3_1:+1039781 None:intergenic
GTTTATTGCTGTGACAACCA+CGG 0.621887 3_1:+1042310 None:intergenic
ATATAAGTGGCAACCTATGG+GGG 0.622034 3_1:-1038997 Msa0343010:CDS
CAAATACACTAGAGCAGCTG+GGG 0.622513 3_1:+1034320 None:intergenic
TTCCACTCTGAAGCCAGCAT+AGG 0.625498 3_1:+1041167 None:intergenic
ACAGCTAAACCAGTCTCGGA+AGG 0.627100 3_1:-1039849 Msa0343010:CDS
CGTATCACAAAGAAGCCGAC+CGG 0.627681 3_1:+1040202 None:intergenic
TCCAATGGGATTCAATAAGG+AGG 0.627800 3_1:-1041087 Msa0343010:CDS
GCATCAGGATATGCTTCGGG+TGG 0.628312 3_1:+1035406 None:intergenic
CTGGGGCATGACAAGACCAA+CGG 0.628948 3_1:+1034337 None:intergenic
TATGTGAATCCACACCAGCA+AGG 0.630470 3_1:-1033102 Msa0343010:three_prime_UTR
AATATAAGTGGCAACCTATG+GGG 0.633202 3_1:-1038998 Msa0343010:CDS
TTCTCGTGACCTATTAAAGG+AGG 0.634465 3_1:-1040171 Msa0343010:intron
ATACAAATAGATTTAAACAC+AGG 0.635070 3_1:+1034289 None:intergenic
ACTGTTGAAAGATCTTCAGA+TGG 0.637112 3_1:-1038374 Msa0343010:CDS
GAGTTTAATTTGGATCCGGA+GGG 0.637203 3_1:-1044508 Msa0343010:CDS
AAATAGATTTAAACACAGGA+GGG 0.637465 3_1:+1034293 None:intergenic
AGAGAGAGAGATAGCAATGG+CGG 0.637581 3_1:-1045577 Msa0343010:exon
GCACAAAGACGTGATACCAC+AGG 0.638333 3_1:+1034846 None:intergenic
CTGATTGGCTATAATTGCAG+GGG 0.639371 3_1:+1034159 None:intergenic
CTGCAGCTTCACCCACCCAA+AGG 0.643038 3_1:+1033187 None:intergenic
GAAACCTGTTGTGAAGAAGG+AGG 0.644278 3_1:-1044671 Msa0343010:CDS
GTGCAGGTTATTGAACGCAA+AGG 0.646019 3_1:-1036052 Msa0343010:intron
ATGAGAACGATAAAATTAGT+CGG 0.646312 3_1:-1045029 Msa0343010:CDS
TGCGAAAGTTAGTGAAGAAG+TGG 0.646437 3_1:-1044635 Msa0343010:CDS
CTCCTATGCTGGCTTCAGAG+TGG 0.647589 3_1:-1041169 Msa0343010:CDS
ACCTAATACAGATTTAGCAG+AGG 0.647928 3_1:+1044942 None:intergenic
TCCTGCAGGTGAAAATTATG+TGG 0.651566 3_1:-1043130 Msa0343010:CDS
ACGAAGCGCAGAGTAACTCA+TGG 0.652101 3_1:-1038766 Msa0343010:CDS
GCTGCTGCTGCTATGATGGG+CGG 0.653414 3_1:-1045156 Msa0343010:CDS
AAGGCTGCTTCCTATGCTGG+AGG 0.654029 3_1:-1038655 Msa0343010:CDS
AATATGGGGAAACGGATGCA+TGG 0.654495 3_1:-1039078 Msa0343010:CDS
GCACAAAGATTGAAGCAACA+AGG 0.655471 3_1:-1035255 Msa0343010:CDS
AGGCGGTGTATTCTTCCTCA+GGG 0.659119 3_1:+1045397 None:intergenic
GTAGAGTACCAAGCAGCATG+TGG 0.661892 3_1:-1040325 Msa0343010:CDS
ATAGCAATGGCGGACGACGA+CGG 0.663375 3_1:-1045567 Msa0343010:exon
GCCGCAGAAGAAGAAACAGA+AGG 0.664871 3_1:+1045189 None:intergenic
TTGATAATTAGGTCAAAACA+GGG 0.665318 3_1:-1043673 Msa0343010:intron
AGATAGACATACCTCATATG+GGG 0.667153 3_1:+1036131 None:intergenic
GCACTTCCAGTAGACCTCAA+AGG 0.668563 3_1:-1042948 Msa0343010:CDS
GGATTTGGTTACAACGACGA+AGG 0.669813 3_1:-1045324 Msa0343010:CDS
TCGCTAACAAGCTCCAGTCA+CGG 0.670367 3_1:+1036014 None:intergenic
ACGGCGGCTAGCGACTAAGG+CGG 0.677032 3_1:+1045380 None:intergenic
TCACCCACCCAAAGGCACAA+CGG 0.680987 3_1:+1033195 None:intergenic
GTGGTGGAAGGTAATGAATG+TGG 0.681054 3_1:-1044751 Msa0343010:CDS
CGTCATCAACGATGAATGAG+CGG 0.681351 3_1:+1045349 None:intergenic
AGAACGATAAAATTAGTCGG+AGG 0.683785 3_1:-1045026 Msa0343010:CDS
GAAAGTTAGTGAAGAAGTGG+TGG 0.684121 3_1:-1044632 Msa0343010:CDS
ATTTCTGCCCTAATGAACCA+AGG 0.686252 3_1:+1033015 None:intergenic
GCTCACAGCAAATTACGTAA+GGG 0.686272 3_1:+1035199 None:intergenic
ATTGCTGTGACAACCACGGG+GGG 0.688758 3_1:+1042314 None:intergenic
GTACAAGAAGAAATGAGGAA+CGG 0.689471 3_1:-1035475 Msa0343010:CDS
AGGAAGCGAAGACCAACCCG+AGG 0.691054 3_1:-1045537 Msa0343010:CDS
TCCGTGCTTACAAGAACATG+TGG 0.705974 3_1:+1035373 None:intergenic
AACAACTGGAGTCTTGCCAG+AGG 0.707117 3_1:-1038324 Msa0343010:intron
TTGCTGGTGATGATGATGAG+AGG 0.707281 3_1:-1034620 Msa0343010:intron
AGGGTAATGAGCTCAGCCAG+CGG 0.714806 3_1:+1037024 None:intergenic
TTGTTGTGAAGAACATGCAG+AGG 0.717304 3_1:-1043628 Msa0343010:CDS
ATGAATTGAAACGAGAACAG+GGG 0.730709 3_1:-1034998 Msa0343010:CDS
TTATTGCTGTGACAACCACG+GGG 0.731047 3_1:+1042312 None:intergenic
TATTGCTGTGACAACCACGG+GGG 0.742494 3_1:+1042313 None:intergenic
TTAAGATGCCCGTTGCAGCG+AGG 0.757926 3_1:+1033720 None:intergenic
TATCTACGACACAATCCCTG+AGG 0.775199 3_1:-1045412 Msa0343010:CDS
ATCTGTGTAGAAGAACATCG+AGG 0.780391 3_1:+1040763 None:intergenic
CTAACAAGCTCCAGTCACGG+CGG 0.808047 3_1:+1036017 None:intergenic
ATGAGCGGGATTGTTCACGG+CGG 0.843893 3_1:+1045364 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATAACAAATGTATTTTT+CGG - chr3_1:1035699-1035718 Msa0343010:intron 10.0%
!!! ATTGTTAAGAATTTTTTTTA+GGG + chr3_1:1037026-1037045 None:intergenic 10.0%
!! AAAACAAAGAATATTTAAAA+AGG + chr3_1:1037904-1037923 None:intergenic 10.0%
!!! CAAAGAAAAATTAAAATTTT+AGG + chr3_1:1040896-1040915 None:intergenic 10.0%
!!! CAATTTTATGAAAAATTAAA+AGG + chr3_1:1042959-1042978 None:intergenic 10.0%
!!! CTTTTAATTTTTCATAAAAT+TGG - chr3_1:1042957-1042976 Msa0343010:CDS 10.0%
!! TTCGTAATATATATATAATT+AGG + chr3_1:1043591-1043610 None:intergenic 10.0%
!!! TATATCATTTTAATTTTTGC+TGG - chr3_1:1034168-1034187 Msa0343010:CDS 15.0%
!!! TACAATATTTTAAACATTAC+AGG - chr3_1:1035530-1035549 Msa0343010:intron 15.0%
!!! TTATAACAAATGTATTTTTC+GGG - chr3_1:1035700-1035719 Msa0343010:intron 15.0%
!!! TATAGTTTATTTCTATATAC+AGG - chr3_1:1036043-1036062 Msa0343010:CDS 15.0%
!!! TAGATTTGGTATATTTTTAT+TGG - chr3_1:1036570-1036589 Msa0343010:intron 15.0%
!! TAATTAAATTTGTATTCTTC+TGG + chr3_1:1036926-1036945 None:intergenic 15.0%
!!! GATTGTTAAGAATTTTTTTT+AGG + chr3_1:1037027-1037046 None:intergenic 15.0%
!!! TAATTTTTATTCAATGAGAA+AGG + chr3_1:1037823-1037842 None:intergenic 15.0%
!!! AAATATTCTTTGTTTTCAAA+TGG - chr3_1:1037908-1037927 Msa0343010:intron 15.0%
!!! AACTAATTGTTTTGAAAAAT+TGG - chr3_1:1039248-1039267 Msa0343010:intron 15.0%
!!! TTTTTATAGTATTCTTGATT+TGG - chr3_1:1039397-1039416 Msa0343010:intron 15.0%
!! GAACAATATATTTCTTATTA+TGG + chr3_1:1039682-1039701 None:intergenic 15.0%
!! ATAAATATAGTCTATTTCAT+GGG + chr3_1:1042041-1042060 None:intergenic 15.0%
!! AATAAATATAGTCTATTTCA+TGG + chr3_1:1042042-1042061 None:intergenic 15.0%
!! TTATGAAAAATTAAAAGGTA+GGG + chr3_1:1042954-1042973 None:intergenic 15.0%
!! TTTATGAAAAATTAAAAGGT+AGG + chr3_1:1042955-1042974 None:intergenic 15.0%
!! TTTAAATCTATTTGTATGTT+GGG - chr3_1:1044223-1044242 Msa0343010:intron 15.0%
!! TTAAATTAATAATACCTGAT+TGG + chr3_1:1044365-1044384 None:intergenic 15.0%
!! AATCAGGTATTATTAATTTA+AGG - chr3_1:1044364-1044383 Msa0343010:intron 15.0%
!!! GTATTATTAATTTAAGGTTA+AGG - chr3_1:1044370-1044389 Msa0343010:intron 15.0%
!!! TTTGTTTTAATGTATTATAG+AGG - chr3_1:1044579-1044598 Msa0343010:CDS 15.0%
!! TTATATGATCTATAATAGTT+AGG - chr3_1:1044858-1044877 Msa0343010:CDS 15.0%
!! CAAATTCTTTATAAATTTAC+AGG + chr3_1:1045077-1045096 None:intergenic 15.0%
!!! TGATTTTAGAAATTTCAGAA+AGG + chr3_1:1032885-1032904 None:intergenic 20.0%
!! AGCAAGAATATAATTAAAGT+AGG - chr3_1:1034562-1034581 Msa0343010:intron 20.0%
!!! AGTTTTTTAGCTTTGTTTTT+GGG - chr3_1:1034703-1034722 Msa0343010:intron 20.0%
!!! TTTATTCAAGTTATACCAAT+AGG + chr3_1:1034783-1034802 None:intergenic 20.0%
!!! AGTTTTCTTTGTTGATAATT+AGG - chr3_1:1034822-1034841 Msa0343010:CDS 20.0%
!!! ATTTTAAACATTACAGGATA+CGG - chr3_1:1035536-1035555 Msa0343010:intron 20.0%
!! GTTATAACCAAAAATATCAA+AGG + chr3_1:1035630-1035649 None:intergenic 20.0%
!!! TTTGTTATAAAGTTTCAGAA+AGG + chr3_1:1035690-1035709 None:intergenic 20.0%
!! AGAAATTATCGTTCAATTTA+AGG + chr3_1:1035849-1035868 None:intergenic 20.0%
!! TCTGATTAAAAGAAAGATTA+TGG - chr3_1:1035924-1035943 Msa0343010:intron 20.0%
!! CTGATTAAAAGAAAGATTAT+GGG - chr3_1:1035925-1035944 Msa0343010:intron 20.0%
!! TGATTAAAAGAAAGATTATG+GGG - chr3_1:1035926-1035945 Msa0343010:intron 20.0%
!!! TATGTTCTGTTTTTCATTTA+TGG + chr3_1:1036232-1036251 None:intergenic 20.0%
!!! TATATGCAAATCTATTTTTC+AGG - chr3_1:1036401-1036420 Msa0343010:intron 20.0%
!!! AGTTTGAAATTTATGTATGT+AGG + chr3_1:1036540-1036559 None:intergenic 20.0%
!! TTTCATATGTTTAACTATTC+AGG - chr3_1:1036858-1036877 Msa0343010:CDS 20.0%
!!! TTAATTTGTTTTAAGCTTCA+AGG + chr3_1:1037152-1037171 None:intergenic 20.0%
!! TACTATATAAGTTGTAGTTA+AGG - chr3_1:1037264-1037283 Msa0343010:CDS 20.0%
!! CTGAAACAAAGTAAATAAAT+GGG + chr3_1:1037636-1037655 None:intergenic 20.0%
!! ACTGAAACAAAGTAAATAAA+TGG + chr3_1:1037637-1037656 None:intergenic 20.0%
!! AATAATTTACCTCCTTTAAT+AGG + chr3_1:1038347-1038366 None:intergenic 20.0%
!!! AATCTAAGTTGATTAAGTAA+GGG - chr3_1:1039217-1039236 Msa0343010:intron 20.0%
!! TGATCATAAGAAAAACAAAA+AGG - chr3_1:1039832-1039851 Msa0343010:CDS 20.0%
!! TGATAAATACATATTACTTC+TGG - chr3_1:1039904-1039923 Msa0343010:intron 20.0%
!!! CTAAAATCATTTTGTGTTAT+AGG - chr3_1:1040236-1040255 Msa0343010:CDS 20.0%
!!! AATTAAGTTTGATTTAGCAT+TGG - chr3_1:1040395-1040414 Msa0343010:intron 20.0%
!!! ATTTGAAATACCACAAAATT+AGG - chr3_1:1040590-1040609 Msa0343010:intron 20.0%
!! TCCTTGAATATTTATTTGAA+AGG - chr3_1:1041032-1041051 Msa0343010:intron 20.0%
!! TCCTTTCAAATAAATATTCA+AGG + chr3_1:1041036-1041055 None:intergenic 20.0%
!! TTATTTGAAAGGATTTACAT+CGG - chr3_1:1041043-1041062 Msa0343010:CDS 20.0%
!!! TAACATTTTTTTATTGCAGA+AGG + chr3_1:1041401-1041420 None:intergenic 20.0%
!! TCTGCAATAAAAAAATGTTA+TGG - chr3_1:1041401-1041420 Msa0343010:intron 20.0%
!!! TTTTGCATAAAATCTTGAAT+TGG + chr3_1:1041462-1041481 None:intergenic 20.0%
!! TCAAAATAACTTGAATTTAG+AGG - chr3_1:1041655-1041674 Msa0343010:intron 20.0%
!! TAAATATAGTCTATTTCATG+GGG + chr3_1:1042040-1042059 None:intergenic 20.0%
!!! TTTGCTATTACAGATAATTT+TGG - chr3_1:1042142-1042161 Msa0343010:intron 20.0%
!! ATTAGGTCAATAAGAAATAT+CGG - chr3_1:1042258-1042277 Msa0343010:CDS 20.0%
!!! TTTAAAATTCTCCAATCATA+TGG + chr3_1:1042744-1042763 None:intergenic 20.0%
!!! ATATGATTGGAGAATTTTAA+AGG - chr3_1:1042743-1042762 Msa0343010:intron 20.0%
!! TTGGTCTAATTATTAATCAT+AGG - chr3_1:1042883-1042902 Msa0343010:intron 20.0%
!! TAATTATTAATCATAGGAGA+AGG - chr3_1:1042889-1042908 Msa0343010:intron 20.0%
!! AGTTATCTTGATTAACATAT+AGG - chr3_1:1043226-1043245 Msa0343010:intron 20.0%
!! ATAAATACAAAGCAAAACTT+TGG + chr3_1:1043417-1043436 None:intergenic 20.0%
!! TATTATTATGTTCTTTGAGT+AGG - chr3_1:1043434-1043453 Msa0343010:intron 20.0%
!! ATTATTATGTTCTTTGAGTA+GGG - chr3_1:1043435-1043454 Msa0343010:intron 20.0%
!!! ATAACAACTAACAGAAATTT+TGG + chr3_1:1043924-1043943 None:intergenic 20.0%
!! GATGATATAAAATTAAATGC+AGG - chr3_1:1044131-1044150 Msa0343010:intron 20.0%
!! ATACAAATAGATTTAAACAC+AGG + chr3_1:1044220-1044239 None:intergenic 20.0%
!! GTTTAAATCTATTTGTATGT+TGG - chr3_1:1044222-1044241 Msa0343010:intron 20.0%
!!! TACTGTTTGTTATATAGAAA+AGG - chr3_1:1044989-1045008 Msa0343010:CDS 20.0%
!! CAAATATTTGTATTGTTCTA+TGG + chr3_1:1045544-1045563 None:intergenic 20.0%
!!! AAAAATTTCATCTTCACTTT+TGG - chr3_1:1045618-1045637 Msa0343010:five_prime_UTR 20.0%
! TAAGAAAAGTAGAGATGATA+AGG - chr3_1:1033409-1033428 Msa0343010:intron 25.0%
!!! TATTGTTGATGATGTTCTTA+AGG - chr3_1:1033442-1033461 Msa0343010:intron 25.0%
! ATGAGAACGATAAAATTAGT+CGG - chr3_1:1033477-1033496 Msa0343010:intron 25.0%
!! AGTGAAAATTTTGCGAAAAT+CGG - chr3_1:1033596-1033615 Msa0343010:intron 25.0%
! TAAGCATCAAGTATGTAAAA+AGG + chr3_1:1034031-1034050 None:intergenic 25.0%
! AAGTTCAAAAACATATCTAC+AGG + chr3_1:1034229-1034248 None:intergenic 25.0%
! TTCACATATTGTCTATCATA+CGG - chr3_1:1034305-1034324 Msa0343010:CDS 25.0%
!!! GAGTTTTTTAGCTTTGTTTT+TGG - chr3_1:1034702-1034721 Msa0343010:intron 25.0%
! AGTTTATAATTTCTGCCTAT+TGG - chr3_1:1034765-1034784 Msa0343010:intron 25.0%
!! TTGATAATTAGGTCAAAACA+GGG - chr3_1:1034833-1034852 Msa0343010:CDS 25.0%
! GAAAATAAATTATCCGTTCA+AGG - chr3_1:1035400-1035419 Msa0343010:CDS 25.0%
!! TTGCTATCCTTTGATATTTT+TGG - chr3_1:1035620-1035639 Msa0343010:intron 25.0%
! AGCTTTCCAAAATGATTTAT+TGG - chr3_1:1035790-1035809 Msa0343010:intron 25.0%
!! TTAGCACCAATAAATCATTT+TGG + chr3_1:1035799-1035818 None:intergenic 25.0%
! TACGTAACTTATAATAGATG+TGG + chr3_1:1036018-1036037 None:intergenic 25.0%
! CTAAGACTTCAAAAAAGAAA+AGG + chr3_1:1036072-1036091 None:intergenic 25.0%
!! AAATATCTATGAAAAAGTGC+TGG + chr3_1:1036380-1036399 None:intergenic 25.0%
! AAAGAAATAGCATATAGAAG+TGG + chr3_1:1036495-1036514 None:intergenic 25.0%
! AAATTTATGTATGTAGGTCT+CGG + chr3_1:1036534-1036553 None:intergenic 25.0%
! AACTCAGATTTGAATAGATT+TGG - chr3_1:1036556-1036575 Msa0343010:intron 25.0%
! TTAACTGAATAAGAGATTGT+GGG + chr3_1:1036671-1036690 None:intergenic 25.0%
! ATTAACTGAATAAGAGATTG+TGG + chr3_1:1036672-1036691 None:intergenic 25.0%
! AATCTCTTATTCAGTTAATG+TGG - chr3_1:1036673-1036692 Msa0343010:CDS 25.0%
! ATGAGATTAAATTGAGTCAA+TGG + chr3_1:1036699-1036718 None:intergenic 25.0%
! TTAACTGAATAAGAGATTGT+GGG + chr3_1:1036671-1036690 None:intergenic 25.0%
! ATTAACTGAATAAGAGATTG+TGG + chr3_1:1036672-1036691 None:intergenic 25.0%
! AATCTCTTATTCAGTTAATG+TGG - chr3_1:1036673-1036692 Msa0343010:CDS 25.0%
! ATGAGATTAAATTGAGTCAA+TGG + chr3_1:1036699-1036718 None:intergenic 25.0%
! CTTACAACAAACAATAATAC+TGG + chr3_1:1036889-1036908 None:intergenic 25.0%
!!! CAGTATTATTGTTTGTTGTA+AGG - chr3_1:1036887-1036906 Msa0343010:CDS 25.0%
! TCATAAATTCCAACATATTG+TGG + chr3_1:1036964-1036983 None:intergenic 25.0%
! TTTACACACAGAATCTTTAA+AGG + chr3_1:1037190-1037209 None:intergenic 25.0%
! TTTGCGAATAACAGTAAAAT+GGG + chr3_1:1037382-1037401 None:intergenic 25.0%
! AGCATAGTATTTGAATTCTA+AGG + chr3_1:1037558-1037577 None:intergenic 25.0%
! AATGTTACAATTACACAAGA+TGG - chr3_1:1037680-1037699 Msa0343010:intron 25.0%
! AATGAGAAAGGTCATATAAT+TGG + chr3_1:1037811-1037830 None:intergenic 25.0%
!! TTAACTGAATTTTGTCTGAA+AGG - chr3_1:1037840-1037859 Msa0343010:intron 25.0%
!! ATATCTTGATGATAAACAGT+TGG - chr3_1:1037934-1037953 Msa0343010:intron 25.0%
!!! CAAGTTTTTATTTGGCTTTA+AGG + chr3_1:1038152-1038171 None:intergenic 25.0%
!!! AACATTTTTGGAACTTCATT+TGG + chr3_1:1038691-1038710 None:intergenic 25.0%
! ACATTATGCAGTATTAAACT+TGG - chr3_1:1038871-1038890 Msa0343010:CDS 25.0%
! CATTATGCAGTATTAAACTT+GGG - chr3_1:1038872-1038891 Msa0343010:CDS 25.0%
! AACAATGAAATGCTAATCAT+TGG + chr3_1:1038906-1038925 None:intergenic 25.0%
! TGATTAGCATTTCATTGTTA+TGG - chr3_1:1038907-1038926 Msa0343010:intron 25.0%
! ATCTAGATACATTATGCAAT+AGG - chr3_1:1038965-1038984 Msa0343010:intron 25.0%
! CACCAATAGATATAAAAGTA+TGG - chr3_1:1038991-1039010 Msa0343010:CDS 25.0%
!! TGCCATACTTTTATATCTAT+TGG + chr3_1:1038996-1039015 None:intergenic 25.0%
! GTTTCAACAACTTAAATAGT+TGG + chr3_1:1039124-1039143 None:intergenic 25.0%
!!! GAATCTAAGTTGATTAAGTA+AGG - chr3_1:1039216-1039235 Msa0343010:intron 25.0%
! GATCAATAAAGTATGTCAAA+TGG + chr3_1:1039298-1039317 None:intergenic 25.0%
! TCAAGAATACTATAAAAACC+AGG + chr3_1:1039395-1039414 None:intergenic 25.0%
!!! ATTTATTTGCTGGCTTAATT+TGG - chr3_1:1039559-1039578 Msa0343010:intron 25.0%
!! ATCTACTGTTTTCTATTTCA+GGG - chr3_1:1039614-1039633 Msa0343010:intron 25.0%
! AATATTATCAACCTGAATGA+TGG + chr3_1:1039951-1039970 None:intergenic 25.0%
! TAAAATAGACAAAATGCCAA+AGG + chr3_1:1040015-1040034 None:intergenic 25.0%
!! TTTGATTTAGCATTGGATTT+AGG - chr3_1:1040402-1040421 Msa0343010:intron 25.0%
!!! AGATTTACAGTTTTGTTGTT+TGG - chr3_1:1040465-1040484 Msa0343010:intron 25.0%
! AAATACCACAAAATTAGGAA+AGG - chr3_1:1040595-1040614 Msa0343010:intron 25.0%
! GTTACAATGAAGCTAATAAA+AGG - chr3_1:1040642-1040661 Msa0343010:intron 25.0%
! CGTTATAAATAATCTTTCTC+TGG + chr3_1:1040682-1040701 None:intergenic 25.0%
!!! TTTACTATTTTCTAGTACCA+TGG - chr3_1:1040712-1040731 Msa0343010:intron 25.0%
!!! ATGTTTTTTTTGCATCGAAA+TGG - chr3_1:1040738-1040757 Msa0343010:intron 25.0%
!!! TGTTTTTTTTGCATCGAAAT+GGG - chr3_1:1040739-1040758 Msa0343010:intron 25.0%
!! ATTCTGACAGAATTCTAAAA+TGG + chr3_1:1040969-1040988 None:intergenic 25.0%
! GATACTTTGTAACCTATATA+TGG - chr3_1:1041119-1041138 Msa0343010:CDS 25.0%
! GAAAGAAAATCACCATATAT+AGG + chr3_1:1041134-1041153 None:intergenic 25.0%
! TAATTATTGTACTGTCTTGT+AGG - chr3_1:1041771-1041790 Msa0343010:intron 25.0%
! ATTCAATAATGGTTTACAGT+GGG - chr3_1:1041812-1041831 Msa0343010:intron 25.0%
! ATCTAAGAAAGTTATTCAAG+AGG - chr3_1:1041864-1041883 Msa0343010:intron 25.0%
! AAATATAGTCTATTTCATGG+GGG + chr3_1:1042039-1042058 None:intergenic 25.0%
! CAAAAACGAAAACTACAATA+AGG + chr3_1:1042204-1042223 None:intergenic 25.0%
!!! TTCTCCTTTAATTTGTCATT+AGG - chr3_1:1042241-1042260 Msa0343010:CDS 25.0%
! TTGACCTAATGACAAATTAA+AGG + chr3_1:1042248-1042267 None:intergenic 25.0%
! GCAATATTTACTCATTTATG+TGG - chr3_1:1042593-1042612 Msa0343010:CDS 25.0%
! TATGTGGTAACTTAATATTG+CGG - chr3_1:1042609-1042628 Msa0343010:intron 25.0%
! ATAATAACCTACCATATGAT+TGG - chr3_1:1042730-1042749 Msa0343010:intron 25.0%
! AAGAAACTTCTTGTATCTTT+GGG - chr3_1:1042766-1042785 Msa0343010:intron 25.0%
! ATGACAAATCCAATCAAATT+TGG + chr3_1:1042842-1042861 None:intergenic 25.0%
! TTTCATAAAATTGGAGTATG+AGG - chr3_1:1042966-1042985 Msa0343010:intron 25.0%
! GTATTAAAACTAGCATTCAA+TGG + chr3_1:1043009-1043028 None:intergenic 25.0%
!!! TTGAATGCTAGTTTTAATAC+AGG - chr3_1:1043009-1043028 Msa0343010:intron 25.0%
! TATCTTGATTAACATATAGG+TGG - chr3_1:1043229-1043248 Msa0343010:intron 25.0%
! AACATATTTCAAAGTTATCC+CGG + chr3_1:1043368-1043387 None:intergenic 25.0%
!!! AACTTTGAAATATGTTGCAT+CGG - chr3_1:1043372-1043391 Msa0343010:intron 25.0%
!!! TACTACTTAGCTATTTTTTG+TGG - chr3_1:1043988-1044007 Msa0343010:intron 25.0%
! CTCTAGCTGTAAATAATTAA+CGG - chr3_1:1044104-1044123 Msa0343010:intron 25.0%
! TAAAATTAAATGCAGGTATC+AGG - chr3_1:1044138-1044157 Msa0343010:intron 25.0%
! AAAATTAAATGCAGGTATCA+GGG - chr3_1:1044139-1044158 Msa0343010:intron 25.0%
! AAATAGATTTAAACACAGGA+GGG + chr3_1:1044216-1044235 None:intergenic 25.0%
! AAAAGCTGTTCATATTTAAC+AGG + chr3_1:1044834-1044853 None:intergenic 25.0%
!!! ATAGTTAGGTTTTAATGCTT+TGG - chr3_1:1044872-1044891 Msa0343010:CDS 25.0%
! ATCAACAATACAAAAGATCA+GGG - chr3_1:1045287-1045306 Msa0343010:CDS 25.0%
! TTATATCAACTACTTTGACA+TGG + chr3_1:1045584-1045603 None:intergenic 25.0%
ATGAATCTGAGAAACCTAAA+CGG - chr3_1:1033261-1033280 Msa0343010:CDS 30.0%
! CTAATTTTATCGTTCTCATC+CGG + chr3_1:1033476-1033495 None:intergenic 30.0%
! AATTTTGCGAAAATCGGTAA+TGG - chr3_1:1033602-1033621 Msa0343010:intron 30.0%
GTTAGTAAGGATAAGGATAA+TGG - chr3_1:1033653-1033672 Msa0343010:intron 30.0%
AAGGTAATGAATGTGGTAAT+GGG - chr3_1:1033762-1033781 Msa0343010:CDS 30.0%
TGATTCGAATAATCAACAAC+AGG - chr3_1:1033973-1033992 Msa0343010:intron 30.0%
TTACATACTTGATGCTTATG+AGG - chr3_1:1034033-1034052 Msa0343010:intron 30.0%
GAGTATTATGGAGCTAATAT+GGG - chr3_1:1034055-1034074 Msa0343010:intron 30.0%
! ATGGGTACTCTTTATTTGTT+TGG - chr3_1:1034073-1034092 Msa0343010:intron 30.0%
! TGGGTACTCTTTATTTGTTT+GGG - chr3_1:1034074-1034093 Msa0343010:intron 30.0%
! TACTCTTTATTTGTTTGGGA+AGG - chr3_1:1034078-1034097 Msa0343010:intron 30.0%
AAATGTCACAATCTTCTCAA+GGG + chr3_1:1034196-1034215 None:intergenic 30.0%
AAAATGTCACAATCTTCTCA+AGG + chr3_1:1034197-1034216 None:intergenic 30.0%
GTATTGTTAAATAACGGCTA+CGG + chr3_1:1034518-1034537 None:intergenic 30.0%
GGAGCAGTATTGTTAAATAA+CGG + chr3_1:1034524-1034543 None:intergenic 30.0%
TATTCTTGCTCACTAACAAT+GGG + chr3_1:1034552-1034571 None:intergenic 30.0%
ATATTCTTGCTCACTAACAA+TGG + chr3_1:1034553-1034572 None:intergenic 30.0%
ATCATGCATCATGAACAAAA+AGG + chr3_1:1034590-1034609 None:intergenic 30.0%
CCAGAAAACTAACATGTTAT+AGG + chr3_1:1034633-1034652 None:intergenic 30.0%
!!! CCTATAACATGTTAGTTTTC+TGG - chr3_1:1034630-1034649 Msa0343010:CDS 30.0%
!! GTTGATAATTAGGTCAAAAC+AGG - chr3_1:1034832-1034851 Msa0343010:CDS 30.0%
! AACTTACTTGCAGCTTTTTA+CGG + chr3_1:1035002-1035021 None:intergenic 30.0%
ATTTCTTGCCTAATTTCTGT+TGG - chr3_1:1035078-1035097 Msa0343010:intron 30.0%
!! CTACAATTTTAAAGAGAGGT+GGG + chr3_1:1035129-1035148 None:intergenic 30.0%
!! CATCCTACAATTTTAAAGAG+AGG + chr3_1:1035133-1035152 None:intergenic 30.0%
TGATGCCACAAATCATAAAT+GGG - chr3_1:1035253-1035272 Msa0343010:CDS 30.0%
CATAACCCATTTATGATTTG+TGG + chr3_1:1035261-1035280 None:intergenic 30.0%
AAAAAATGTATGTGGCACAA+AGG + chr3_1:1035289-1035308 None:intergenic 30.0%
AGACGAACAAAAAATGTATG+TGG + chr3_1:1035297-1035316 None:intergenic 30.0%
GATTTAACATGTACCTTGAA+CGG + chr3_1:1035416-1035435 None:intergenic 30.0%
!!! TGTGTTTATTTTGTCTGTCA+TGG - chr3_1:1035723-1035742 Msa0343010:intron 30.0%
! ACACTTTTCAACACAAGTTT+GGG + chr3_1:1035826-1035845 None:intergenic 30.0%
AAAGTAAAATCTCACCCTTT+GGG + chr3_1:1035995-1036014 None:intergenic 30.0%
AGACTTCAAAAAAGAAAAGG+AGG + chr3_1:1036069-1036088 None:intergenic 30.0%
!! GTTCTGTTTTTCATTTATGG+TGG + chr3_1:1036229-1036248 None:intergenic 30.0%
!!! TGCAAATCTATTTTTCAGGA+AGG - chr3_1:1036405-1036424 Msa0343010:intron 30.0%
!! TATGCTTCTTGAGTTTGTTA+TGG - chr3_1:1036444-1036463 Msa0343010:intron 30.0%
!! TTATTGGTAATGATGCATAC+TGG - chr3_1:1036586-1036605 Msa0343010:intron 30.0%
!! TATTGGTAATGATGCATACT+GGG - chr3_1:1036587-1036606 Msa0343010:intron 30.0%
! CTTGTTGTAACATGAACTTA+TGG - chr3_1:1036798-1036817 Msa0343010:intron 30.0%
AAATTCCAACATATTGTGGA+AGG + chr3_1:1036960-1036979 None:intergenic 30.0%
TCTAAAAAGTCAAACAGGAA+AGG + chr3_1:1037311-1037330 None:intergenic 30.0%
GTCAATCTAAAAAGTCAAAC+AGG + chr3_1:1037316-1037335 None:intergenic 30.0%
GTTTGCGAATAACAGTAAAA+TGG + chr3_1:1037383-1037402 None:intergenic 30.0%
TGATGGGAATATATTTCCAA+TGG - chr3_1:1037404-1037423 Msa0343010:intron 30.0%
GATGGGAATATATTTCCAAT+GGG - chr3_1:1037405-1037424 Msa0343010:intron 30.0%
ATTTCCAATGGGATTCAATA+AGG - chr3_1:1037416-1037435 Msa0343010:intron 30.0%
CTTGTTGGACATAATATTTC+TGG - chr3_1:1037714-1037733 Msa0343010:intron 30.0%
! AACAGTTGGTTCAAATTGTT+TGG - chr3_1:1037948-1037967 Msa0343010:intron 30.0%
!! AAAGGTTATGATGGATATAC+CGG - chr3_1:1038007-1038026 Msa0343010:intron 30.0%
TTGCAGTGTAAAATGAAAGT+TGG + chr3_1:1038116-1038135 None:intergenic 30.0%
! GAGGTAAATTATTTGTTGAG+AGG - chr3_1:1038354-1038373 Msa0343010:CDS 30.0%
TCTAACACTCACACAATTAT+TGG - chr3_1:1038407-1038426 Msa0343010:intron 30.0%
CTAACACTCACACAATTATT+GGG - chr3_1:1038408-1038427 Msa0343010:intron 30.0%
ATTATTGGGTGAAATCAATG+TGG - chr3_1:1038422-1038441 Msa0343010:intron 30.0%
TTATTGGGTGAAATCAATGT+GGG - chr3_1:1038423-1038442 Msa0343010:intron 30.0%
ATAAAGTGGTGAGATTCATA+TGG - chr3_1:1038472-1038491 Msa0343010:intron 30.0%
TCTAACAATCCCTCATTTAT+GGG + chr3_1:1038505-1038524 None:intergenic 30.0%
TTCTTACTAACTACCTTCAT+TGG - chr3_1:1038593-1038612 Msa0343010:CDS 30.0%
!! TTTGCAGTTTGGAACATTTT+TGG + chr3_1:1038703-1038722 None:intergenic 30.0%
AGGAAAGATAAAACTGTTCT+GGG + chr3_1:1038756-1038775 None:intergenic 30.0%
AAGGAAAGATAAAACTGTTC+TGG + chr3_1:1038757-1038776 None:intergenic 30.0%
CTTTGTACTATTGTTGATGT+CGG - chr3_1:1039061-1039080 Msa0343010:CDS 30.0%
GTTGAAACTTCAAAGTGATA+AGG - chr3_1:1039136-1039155 Msa0343010:intron 30.0%
!! TGATTTGGTCAGATTGAATA+TGG - chr3_1:1039412-1039431 Msa0343010:intron 30.0%
! GATTTGGTCAGATTGAATAT+GGG - chr3_1:1039413-1039432 Msa0343010:intron 30.0%
ATTTGGTCAGATTGAATATG+GGG - chr3_1:1039414-1039433 Msa0343010:intron 30.0%
! CATCTACTGTTTTCTATTTC+AGG - chr3_1:1039613-1039632 Msa0343010:intron 30.0%
TTATCATATAGACCCTTCTT+TGG + chr3_1:1039890-1039909 None:intergenic 30.0%
!!! ACAACTCAGTTGTCTTTTTT+TGG - chr3_1:1040340-1040359 Msa0343010:intron 30.0%
!!! CAACTCAGTTGTCTTTTTTT+GGG - chr3_1:1040341-1040360 Msa0343010:intron 30.0%
! GAAAGTAGTGTTTGTTAATG+AGG - chr3_1:1040369-1040388 Msa0343010:intron 30.0%
ACAAATTCTCACTAAAAAGC+TGG + chr3_1:1040558-1040577 None:intergenic 30.0%
TAGCTTCATTGTAACAATCA+TGG + chr3_1:1040637-1040656 None:intergenic 30.0%
ACAATGAAGCTAATAAAAGG+TGG - chr3_1:1040645-1040664 Msa0343010:intron 30.0%
ATTCTCTACTTGAAATAGTG+AGG + chr3_1:1040793-1040812 None:intergenic 30.0%
!! TGTCTTTCTTTGTTTCTATC+TGG + chr3_1:1040825-1040844 None:intergenic 30.0%
AAACAAAGAAAGACACTTCA+GGG - chr3_1:1040830-1040849 Msa0343010:CDS 30.0%
TTGATTACATTGACCAAGAA+TGG - chr3_1:1040998-1041017 Msa0343010:intron 30.0%
AAACCAAGATAAAAACCTGT+TGG + chr3_1:1041332-1041351 None:intergenic 30.0%
! AATCGTTAATTTTGAGCACT+CGG + chr3_1:1041371-1041390 None:intergenic 30.0%
GCATATTCTTCTTACTTGTA+GGG + chr3_1:1041504-1041523 None:intergenic 30.0%
AGCATATTCTTCTTACTTGT+AGG + chr3_1:1041505-1041524 None:intergenic 30.0%
TACAAGTAAGAAGAATATGC+TGG - chr3_1:1041504-1041523 Msa0343010:intron 30.0%
! ACGATTTTATTATGTACACG+AGG - chr3_1:1041711-1041730 Msa0343010:intron 30.0%
!! TGGTGATACTGATTCAATAA+TGG - chr3_1:1041801-1041820 Msa0343010:intron 30.0%
GATTCAATAATGGTTTACAG+TGG - chr3_1:1041811-1041830 Msa0343010:intron 30.0%
AGTTCATCATATAGGTTCAA+AGG + chr3_1:1041919-1041938 None:intergenic 30.0%
TGCAAAAGAAAAGAAAGTTG+AGG + chr3_1:1041965-1041984 None:intergenic 30.0%
AATATAGTCTATTTCATGGG+GGG + chr3_1:1042038-1042057 None:intergenic 30.0%
TGCTTAGAAATTGATCTTGA+TGG - chr3_1:1042281-1042300 Msa0343010:CDS 30.0%
! ATCTTGATGGTTTGTATAAG+AGG - chr3_1:1042294-1042313 Msa0343010:CDS 30.0%
AAAGAAATATGCAGCTGTTA+AGG - chr3_1:1042334-1042353 Msa0343010:CDS 30.0%
AAGATAGACATACCTCATAT+GGG + chr3_1:1042379-1042398 None:intergenic 30.0%
TAAGATAGACATACCTCATA+TGG + chr3_1:1042380-1042399 None:intergenic 30.0%
! TTGCTTGACTCAAATTTTGT+CGG - chr3_1:1042531-1042550 Msa0343010:CDS 30.0%
AAATTCTCCAATCATATGGT+AGG + chr3_1:1042740-1042759 None:intergenic 30.0%
GAAGAAACTTCTTGTATCTT+TGG - chr3_1:1042765-1042784 Msa0343010:intron 30.0%
TCAAATTTGGATATGCATCA+AGG + chr3_1:1042829-1042848 None:intergenic 30.0%
GATGCATATCCAAATTTGAT+TGG - chr3_1:1042830-1042849 Msa0343010:intron 30.0%
TAAAACTAGCATTCAATGGT+TGG + chr3_1:1043005-1043024 None:intergenic 30.0%
!! ACTTTGAAATATGTTGCATC+GGG - chr3_1:1043373-1043392 Msa0343010:intron 30.0%
TGATTACTATTTGTCACAAC+AGG - chr3_1:1043548-1043567 Msa0343010:CDS 30.0%
! TATCAACTGTTCTTTTGCAT+TGG - chr3_1:1043802-1043821 Msa0343010:intron 30.0%
AACATAAATCAAGTGAAGCA+AGG - chr3_1:1043838-1043857 Msa0343010:intron 30.0%
ACATAAATCAAGTGAAGCAA+GGG - chr3_1:1043839-1043858 Msa0343010:intron 30.0%
!! ATGATGTTAATTTTGACACG+AGG - chr3_1:1043942-1043961 Msa0343010:intron 30.0%
!!! TACTTAGCTATTTTTTGTGG+AGG - chr3_1:1043991-1044010 Msa0343010:intron 30.0%
! TCCAGTTTCATTTTGAATAC+AGG - chr3_1:1044078-1044097 Msa0343010:intron 30.0%
ACCTGTATTCAAAATGAAAC+TGG + chr3_1:1044082-1044101 None:intergenic 30.0%
! GCTGTAAATAATTAACGGAT+TGG - chr3_1:1044109-1044128 Msa0343010:intron 30.0%
CAAATAGATTTAAACACAGG+AGG + chr3_1:1044217-1044236 None:intergenic 30.0%
!! ACACCATTTTCAAAGCATTT+GGG + chr3_1:1044316-1044335 None:intergenic 30.0%
!! AACACCATTTTCAAAGCATT+TGG + chr3_1:1044317-1044336 None:intergenic 30.0%
!! AAATGCTTTGAAAATGGTGT+TGG - chr3_1:1044316-1044335 Msa0343010:intron 30.0%
!! ATTCACAATATGCTTTAGAG+AGG + chr3_1:1044623-1044642 None:intergenic 30.0%
GTTCATATTTAACAGGTTTG+TGG + chr3_1:1044827-1044846 None:intergenic 30.0%
! ATATAGAAAAGGTATGTCAC+TGG - chr3_1:1045000-1045019 Msa0343010:CDS 30.0%
! TATAGAAAAGGTATGTCACT+GGG - chr3_1:1045001-1045020 Msa0343010:CDS 30.0%
TAAATTTACAGGTTTACGTC+AGG + chr3_1:1045066-1045085 None:intergenic 30.0%
!! CATGTTTTTATTACACCAGA+TGG - chr3_1:1045197-1045216 Msa0343010:CDS 30.0%
CATCAACAATACAAAAGATC+AGG - chr3_1:1045286-1045305 Msa0343010:CDS 30.0%
GTTGTTGCAATTTAAATTGC+AGG - chr3_1:1045348-1045367 Msa0343010:CDS 30.0%
TCTCTCTCTCTAACTAACTT+TGG + chr3_1:1032918-1032937 None:intergenic 35.0%
TCTTTCTCTTTCTTCCGTTT+AGG + chr3_1:1033278-1033297 None:intergenic 35.0%
AGAACGATAAAATTAGTCGG+AGG - chr3_1:1033480-1033499 Msa0343010:intron 35.0%
CTTCTGTTGTTAATGATGCA+CGG - chr3_1:1033522-1033541 Msa0343010:CDS 35.0%
! TGTTAATGATGCACGGATTA+AGG - chr3_1:1033529-1033548 Msa0343010:CDS 35.0%
CCTAATACAGATTTAGCAGA+GGG + chr3_1:1033566-1033585 None:intergenic 35.0%
ACCTAATACAGATTTAGCAG+AGG + chr3_1:1033567-1033586 None:intergenic 35.0%
! AAAATCGGTAATGGTGGAAA+TGG - chr3_1:1033611-1033630 Msa0343010:intron 35.0%
GGAAATGGTGAAATTGAATC+TGG - chr3_1:1033626-1033645 Msa0343010:intron 35.0%
ATGGTGAAATTGAATCTGGT+AGG - chr3_1:1033630-1033649 Msa0343010:intron 35.0%
TGGTGAAATTGAATCTGGTA+GGG - chr3_1:1033631-1033650 Msa0343010:intron 35.0%
!! AAGGATAATGGATCCAGAAT+AGG - chr3_1:1033665-1033684 Msa0343010:intron 35.0%
!! AGGATAATGGATCCAGAATA+GGG - chr3_1:1033666-1033685 Msa0343010:intron 35.0%
GAAGGTAATGAATGTGGTAA+TGG - chr3_1:1033761-1033780 Msa0343010:CDS 35.0%
! AGGTAATGAATGTGGTAATG+GGG - chr3_1:1033763-1033782 Msa0343010:CDS 35.0%
GGATTTAGTTGAAGAGAAAG+TGG - chr3_1:1033784-1033803 Msa0343010:CDS 35.0%
GAAGGTGAAAGATGAAGAAA+TGG - chr3_1:1033808-1033827 Msa0343010:CDS 35.0%
TTCGAATAATCAACAACAGG+TGG - chr3_1:1033976-1033995 Msa0343010:intron 35.0%
ACAACAGGTGGAGTTTAATT+TGG - chr3_1:1033988-1034007 Msa0343010:intron 35.0%
!! GATGCTTATGAGGAGTATTA+TGG - chr3_1:1034043-1034062 Msa0343010:intron 35.0%
! GGAGTATTATGGAGCTAATA+TGG - chr3_1:1034054-1034073 Msa0343010:intron 35.0%
!!! TTAGCTTTGTTTTTGGGACT+TGG - chr3_1:1034709-1034728 Msa0343010:intron 35.0%
AACTCTAGCCAACAGAAATT+AGG + chr3_1:1035089-1035108 None:intergenic 35.0%
!! CCTACAATTTTAAAGAGAGG+TGG + chr3_1:1035130-1035149 None:intergenic 35.0%
!! CCACCTCTCTTTAAAATTGT+AGG - chr3_1:1035127-1035146 Msa0343010:intron 35.0%
GAATGAGATAGCAAAACATC+TGG - chr3_1:1035169-1035188 Msa0343010:intron 35.0%
GTTAATCAGCAAACCTTAAC+AGG + chr3_1:1035227-1035246 None:intergenic 35.0%
CTGATGCCACAAATCATAAA+TGG - chr3_1:1035252-1035271 Msa0343010:CDS 35.0%
! ACAAAAGTATGCAATAGCGA+AGG - chr3_1:1035648-1035667 Msa0343010:intron 35.0%
ACTGAGCAAAAATGCTTCAT+TGG + chr3_1:1035766-1035785 None:intergenic 35.0%
! GACACTTTTCAACACAAGTT+TGG + chr3_1:1035827-1035846 None:intergenic 35.0%
! TTTGAAACTTGTAGCCATGA+AGG + chr3_1:1035952-1035971 None:intergenic 35.0%
GAAAGTAAAATCTCACCCTT+TGG + chr3_1:1035996-1036015 None:intergenic 35.0%
GAAGAATTCCTGATGTCTTT+AGG + chr3_1:1036150-1036169 None:intergenic 35.0%
ATCTGTTGTCAGTTGCAATA+TGG - chr3_1:1036269-1036288 Msa0343010:intron 35.0%
TGTCAGTTGCAATATGGTTA+AGG - chr3_1:1036275-1036294 Msa0343010:intron 35.0%
! CAATGCACTTTGAGAAATGA+TGG + chr3_1:1036338-1036357 None:intergenic 35.0%
GTTGTTAGTGAACACTAGTT+TGG + chr3_1:1036624-1036643 None:intergenic 35.0%
!! ACTACAAAGCTTTAAGCTTC+AGG - chr3_1:1036822-1036841 Msa0343010:intron 35.0%
TTGAACCTTCCACAATATGT+TGG - chr3_1:1036952-1036971 Msa0343010:intron 35.0%
CTGCTTAAGAGTCAAATAGT+TGG - chr3_1:1037057-1037076 Msa0343010:CDS 35.0%
TAGCTGATACAATATGCACT+AGG - chr3_1:1037107-1037126 Msa0343010:intron 35.0%
ACTGTTATTCGCAAACTTGA+TGG - chr3_1:1037387-1037406 Msa0343010:intron 35.0%
CTGTTATTCGCAAACTTGAT+GGG - chr3_1:1037388-1037407 Msa0343010:intron 35.0%
GTAAATAAATGGGTCAATCC+TGG + chr3_1:1037626-1037645 None:intergenic 35.0%
TGGTTCAAATTGTTTGGACT+AGG - chr3_1:1037954-1037973 Msa0343010:intron 35.0%
TGAAAATCACGTAAGACGAA+AGG - chr3_1:1037989-1038008 Msa0343010:intron 35.0%
TATTCAATTAGCTACCTTGC+CGG + chr3_1:1038029-1038048 None:intergenic 35.0%
AGCCAAATAAAAACTTGTGC+AGG - chr3_1:1038155-1038174 Msa0343010:intron 35.0%
! AGCCTGCACAAGTTTTTATT+TGG + chr3_1:1038160-1038179 None:intergenic 35.0%
GATAGAAGAGGCAAAACATT+TGG - chr3_1:1038246-1038265 Msa0343010:intron 35.0%
!! AGAGGCAAAACATTTGGTTT+TGG - chr3_1:1038252-1038271 Msa0343010:intron 35.0%
ATGTTCTCGTGACCTATTAA+AGG - chr3_1:1038332-1038351 Msa0343010:CDS 35.0%
! AAAATGGGTTCCACATAAAG+TGG - chr3_1:1038458-1038477 Msa0343010:intron 35.0%
ATGAATCTCACCACTTTATG+TGG + chr3_1:1038471-1038490 None:intergenic 35.0%
TGGATTTCATCCCATAAATG+AGG - chr3_1:1038492-1038511 Msa0343010:intron 35.0%
GGATTTCATCCCATAAATGA+GGG - chr3_1:1038493-1038512 Msa0343010:intron 35.0%
CTCTAACAATCCCTCATTTA+TGG + chr3_1:1038506-1038525 None:intergenic 35.0%
GAGTTAAAGAATAGCTAACC+TGG + chr3_1:1038624-1038643 None:intergenic 35.0%
! TAAAAGTATGGCAGTTGTCA+TGG - chr3_1:1039003-1039022 Msa0343010:CDS 35.0%
!! CAGAAGCATTATCAAGTTCA+AGG + chr3_1:1039100-1039119 None:intergenic 35.0%
!! CTTGAACTTGATAATGCTTC+TGG - chr3_1:1039098-1039117 Msa0343010:intron 35.0%
ACTTCAAAGTGATAAGGTGT+TGG - chr3_1:1039142-1039161 Msa0343010:intron 35.0%
AATCATCTTTGCTTCTATCC+TGG - chr3_1:1039374-1039393 Msa0343010:intron 35.0%
TCAGATTGAATATGGGGAAA+CGG - chr3_1:1039420-1039439 Msa0343010:intron 35.0%
GAATATAAGTGGCAACCTAT+GGG - chr3_1:1039507-1039526 Msa0343010:intron 35.0%
AATATAAGTGGCAACCTATG+GGG - chr3_1:1039508-1039527 Msa0343010:intron 35.0%
ATTATACACGATGTAGCAGT+TGG - chr3_1:1039583-1039602 Msa0343010:intron 35.0%
GCGTAATTAGAAAACTTGTC+TGG + chr3_1:1039704-1039723 None:intergenic 35.0%
GACGATGCAGATATTAATGA+TGG - chr3_1:1039782-1039801 Msa0343010:intron 35.0%
! TATCAACCTGAATGATGGAA+GGG + chr3_1:1039946-1039965 None:intergenic 35.0%
! TTATCAACCTGAATGATGGA+AGG + chr3_1:1039947-1039966 None:intergenic 35.0%
TCTCTTTCAAAATGTGCTTC+TGG - chr3_1:1039970-1039989 Msa0343010:intron 35.0%
CACCTCTATGGTGTAATTTA+TGG - chr3_1:1040050-1040069 Msa0343010:intron 35.0%
TGCCATAAATTACACCATAG+AGG + chr3_1:1040055-1040074 None:intergenic 35.0%
ACTGTTGAAAGATCTTCAGA+TGG - chr3_1:1040132-1040151 Msa0343010:intron 35.0%
!! ACTCCAGTTGTTTTACTAGA+TGG + chr3_1:1040174-1040193 None:intergenic 35.0%
TGTTATCAAACACGGTAACA+CGG + chr3_1:1040309-1040328 None:intergenic 35.0%
AGCTGCAATGTTATCAAACA+CGG + chr3_1:1040317-1040336 None:intergenic 35.0%
AGTATCTTGTGTTTCGTGTT+AGG - chr3_1:1040429-1040448 Msa0343010:intron 35.0%
! CGAATCCTTTCCTAATTTTG+TGG + chr3_1:1040603-1040622 None:intergenic 35.0%
!! ACTATTTTCTAGTACCATGG+TGG - chr3_1:1040715-1040734 Msa0343010:intron 35.0%
TGCAAAAAAAACATCCACCA+TGG + chr3_1:1040732-1040751 None:intergenic 35.0%
GAAACAAAGAAAGACACTTC+AGG - chr3_1:1040829-1040848 Msa0343010:CDS 35.0%
AGGGTATAGCACTATAAGTA+AGG - chr3_1:1040849-1040868 Msa0343010:CDS 35.0%
TTGGTCAATGTAATCAACAG+AGG + chr3_1:1040995-1041014 None:intergenic 35.0%
TGCTGAAAAAACTGGTTATG+TGG - chr3_1:1041218-1041237 Msa0343010:intron 35.0%
TGAAAAAACTGGTTATGTGG+AGG - chr3_1:1041221-1041240 Msa0343010:intron 35.0%
ATCTTGAATTGGAAAATCCC+AGG + chr3_1:1041451-1041470 None:intergenic 35.0%
! AAGATTTTATGCAAAACCGC+TGG - chr3_1:1041466-1041485 Msa0343010:intron 35.0%
! GTATGGTAATGAGTAATGAC+TGG + chr3_1:1041545-1041564 None:intergenic 35.0%
CTGAGACTATATTGAGAGTA+TGG + chr3_1:1041562-1041581 None:intergenic 35.0%
TTCCATGTTTGATGTCATAC+AGG - chr3_1:1041598-1041617 Msa0343010:intron 35.0%
TCCATGTTTGATGTCATACA+GGG - chr3_1:1041599-1041618 Msa0343010:intron 35.0%
ATATAGTCTATTTCATGGGG+GGG + chr3_1:1042037-1042056 None:intergenic 35.0%
GTTAAGGTGCAGTTTAAAGA+TGG - chr3_1:1042350-1042369 Msa0343010:CDS 35.0%
AGATAGACATACCTCATATG+GGG + chr3_1:1042378-1042397 None:intergenic 35.0%
!! TTTTAGAAGAACATGCCAGT+AGG - chr3_1:1042420-1042439 Msa0343010:intron 35.0%
ATGCCAGTAGGATTAACATA+TGG - chr3_1:1042432-1042451 Msa0343010:intron 35.0%
!! AGCTTGTTAGCGAAAGATTT+AGG - chr3_1:1042502-1042521 Msa0343010:intron 35.0%
! TGCTTGACTCAAATTTTGTC+GGG - chr3_1:1042532-1042551 Msa0343010:CDS 35.0%
AATTCACAACTCTCTCATGA+AGG - chr3_1:1042671-1042690 Msa0343010:intron 35.0%
TACAGGTACAAGAAGAAATG+AGG - chr3_1:1043026-1043045 Msa0343010:intron 35.0%
GTACAAGAAGAAATGAGGAA+CGG - chr3_1:1043031-1043050 Msa0343010:intron 35.0%
GCTCTCAATCAAAATACAAC+CGG - chr3_1:1043346-1043365 Msa0343010:CDS 35.0%
CTCTCAATCAAAATACAACC+GGG - chr3_1:1043347-1043366 Msa0343010:CDS 35.0%
ATTATGTTCTTTGAGTAGGG+CGG - chr3_1:1043438-1043457 Msa0343010:intron 35.0%
TGTTCTCGTTTCAATTCATC+CGG + chr3_1:1043507-1043526 None:intergenic 35.0%
GATGAATTGAAACGAGAACA+GGG - chr3_1:1043507-1043526 Msa0343010:intron 35.0%
ATGAATTGAAACGAGAACAG+GGG - chr3_1:1043508-1043527 Msa0343010:intron 35.0%
TAATTAGGTACTAAACCGCA+AGG + chr3_1:1043576-1043595 None:intergenic 35.0%
! AAAGACTGGCTGATTGTTTA+GGG - chr3_1:1043706-1043725 Msa0343010:intron 35.0%
GACACATCAAAGGTAAAACT+TGG - chr3_1:1043732-1043751 Msa0343010:intron 35.0%
GCAAATAAAAGTGAGCTTGT+AGG + chr3_1:1043870-1043889 None:intergenic 35.0%
!! ACAAGCTCACTTTTATTTGC+TGG - chr3_1:1043870-1043889 Msa0343010:intron 35.0%
AGGAATCTGACTACAATTTC+TGG - chr3_1:1044275-1044294 Msa0343010:intron 35.0%
!! TGTCCCAAATGCTTTGAAAA+TGG - chr3_1:1044310-1044329 Msa0343010:intron 35.0%
AAACCTTCATATGGCTGAAA+TGG + chr3_1:1044420-1044439 None:intergenic 35.0%
TCAGCGTAAAAACCTTCATA+TGG + chr3_1:1044429-1044448 None:intergenic 35.0%
TTTACGCTGATATCAGATCA+TGG - chr3_1:1044439-1044458 Msa0343010:CDS 35.0%
! ACAGCAACATCTAATTTTGC+AGG + chr3_1:1044654-1044673 None:intergenic 35.0%
!! GATTTTTCAGTACACTGAAG+CGG - chr3_1:1044926-1044945 Msa0343010:CDS 35.0%
! GTTTTTATTACACCAGATGG+AGG - chr3_1:1045200-1045219 Msa0343010:CDS 35.0%
TTGATCAACTCCTTCTCTAT+CGG + chr3_1:1045240-1045259 None:intergenic 35.0%
! AGAAGGAGTTGATCAAAATC+AGG - chr3_1:1045244-1045263 Msa0343010:CDS 35.0%
TCAACTACTTTGACATGGTT+TGG + chr3_1:1045579-1045598 None:intergenic 35.0%
TAGAGAGAGAGAGATAGCAA+TGG - chr3_1:1032926-1032945 Msa0343010:three_prime_UTR 40.0%
!! TCATTCATCGTTGATGACGA+CGG - chr3_1:1033161-1033180 Msa0343010:exon 40.0%
GAATTCTTCGTCTGAGGAAA+GGG + chr3_1:1033240-1033259 None:intergenic 40.0%
TTCATCGAATTCTTCGTCTG+AGG + chr3_1:1033246-1033265 None:intergenic 40.0%
! TCCTTCTGTTTCTTCTTCTG+CGG - chr3_1:1033316-1033335 Msa0343010:intron 40.0%
CGATAAAATTAGTCGGAGGA+AGG - chr3_1:1033484-1033503 Msa0343010:intron 40.0%
CCCTCTGCTAAATCTGTATT+AGG - chr3_1:1033563-1033582 Msa0343010:CDS 40.0%
! TTTGCGAAAATCGGTAATGG+TGG - chr3_1:1033605-1033624 Msa0343010:intron 40.0%
! TGAATCTGGTAGGGTTAGTA+AGG - chr3_1:1033640-1033659 Msa0343010:intron 40.0%
! TGGTAGGGTTAGTAAGGATA+AGG - chr3_1:1033646-1033665 Msa0343010:intron 40.0%
AATGGATCCAGAATAGGGTT+AGG - chr3_1:1033671-1033690 Msa0343010:intron 40.0%
ATGGATCCAGAATAGGGTTA+GGG - chr3_1:1033672-1033691 Msa0343010:intron 40.0%
AGTAGAAGTGAACGAGAGTT+TGG - chr3_1:1033712-1033731 Msa0343010:intron 40.0%
GTAGAAGTGAACGAGAGTTT+GGG - chr3_1:1033713-1033732 Msa0343010:CDS 40.0%
AGTGAAACCTGTTGTGAAGA+AGG - chr3_1:1033832-1033851 Msa0343010:intron 40.0%
AAACCTGTTGTGAAGAAGGA+GGG - chr3_1:1033836-1033855 Msa0343010:intron 40.0%
TGCGAAAGTTAGTGAAGAAG+TGG - chr3_1:1033871-1033890 Msa0343010:intron 40.0%
GAAAGTTAGTGAAGAAGTGG+TGG - chr3_1:1033874-1033893 Msa0343010:intron 40.0%
!! GGTGGAGTTTAATTTGGATC+CGG - chr3_1:1033994-1034013 Msa0343010:intron 40.0%
!! GAGTTTAATTTGGATCCGGA+GGG - chr3_1:1033998-1034017 Msa0343010:intron 40.0%
TGTTTGGGAAGGTAATTTCG+TGG - chr3_1:1034089-1034108 Msa0343010:intron 40.0%
!! GTCTATCATACGGTGTTATG+TGG - chr3_1:1034315-1034334 Msa0343010:CDS 40.0%
GCTTTATAGCATTGTCACAG+CGG + chr3_1:1034389-1034408 None:intergenic 40.0%
GCTCACTAACAATGGGTATT+AGG + chr3_1:1034545-1034564 None:intergenic 40.0%
!!! ATGTTAGTTTTCTGGTGCCA+AGG - chr3_1:1034638-1034657 Msa0343010:CDS 40.0%
ACTGACTGTTTAATGCAACC+CGG + chr3_1:1034748-1034767 None:intergenic 40.0%
TTGTTGTGAAGAACATGCAG+AGG - chr3_1:1034878-1034897 Msa0343010:intron 40.0%
GTTGAATGCAAAGGATGACT+TGG + chr3_1:1034919-1034938 None:intergenic 40.0%
! ATCTCACTGGTTGAATGCAA+AGG + chr3_1:1034928-1034947 None:intergenic 40.0%
! AGCTTTTTACGGAAATCTGC+AGG + chr3_1:1034991-1035010 None:intergenic 40.0%
TGAGATAGCAAAACATCTGG+TGG - chr3_1:1035172-1035191 Msa0343010:intron 40.0%
!! AGCAAAACATCTGGTGGATT+TGG - chr3_1:1035178-1035197 Msa0343010:intron 40.0%
!! GCAAAACATCTGGTGGATTT+GGG - chr3_1:1035179-1035198 Msa0343010:intron 40.0%
TCCTGCAGGTGAAAATTATG+TGG - chr3_1:1035376-1035395 Msa0343010:intron 40.0%
! ACCACATAATTTTCACCTGC+AGG + chr3_1:1035380-1035399 None:intergenic 40.0%
ACACACATAACAAGCTTGTC+GGG + chr3_1:1035492-1035511 None:intergenic 40.0%
CACACACATAACAAGCTTGT+CGG + chr3_1:1035493-1035512 None:intergenic 40.0%
CACAGAAACTTTCTCCTTTG+AGG + chr3_1:1035575-1035594 None:intergenic 40.0%
GAAAGTTTCTGTGCTCTTCT+TGG - chr3_1:1035582-1035601 Msa0343010:intron 40.0%
! TAGCAGCTTCTTTTGCTTAC+AGG - chr3_1:1036089-1036108 Msa0343010:intron 40.0%
! TCTTTTGCTTACAGGTTAGC+TGG - chr3_1:1036097-1036116 Msa0343010:intron 40.0%
TTTATTGCTGTGACAACCAC+GGG + chr3_1:1036198-1036217 None:intergenic 40.0%
GTTTATTGCTGTGACAACCA+CGG + chr3_1:1036199-1036218 None:intergenic 40.0%
TCAAACAGGAAAGGTTACTG+TGG + chr3_1:1037302-1037321 None:intergenic 40.0%
TTAGATTGACACTCCTATGC+TGG - chr3_1:1037326-1037345 Msa0343010:intron 40.0%
TCCAATGGGATTCAATAAGG+AGG - chr3_1:1037419-1037438 Msa0343010:intron 40.0%
ACCTCCTTATTGAATCCCAT+TGG + chr3_1:1037423-1037442 None:intergenic 40.0%
ACGGACAGAAACATAAAAGC+TGG - chr3_1:1037444-1037463 Msa0343010:intron 40.0%
CGGACAGAAACATAAAAGCT+GGG - chr3_1:1037445-1037464 Msa0343010:intron 40.0%
ATGTTCTGTGTGTTGAAAGC+AGG - chr3_1:1037472-1037491 Msa0343010:intron 40.0%
! TGAATTCTAAGGACGACATG+TGG + chr3_1:1037547-1037566 None:intergenic 40.0%
AATACCATATGCTTGCTTCC+AGG - chr3_1:1037605-1037624 Msa0343010:intron 40.0%
ATCTGTGTAGAAGAACATCG+AGG + chr3_1:1037746-1037765 None:intergenic 40.0%
TGTTCTTCTACACAGATCTC+AGG - chr3_1:1037749-1037768 Msa0343010:intron 40.0%
ACAGATCTCAGGTAGGAATT+TGG - chr3_1:1037760-1037779 Msa0343010:intron 40.0%
CGTAAGACGAAAGGTTATGA+TGG - chr3_1:1037998-1038017 Msa0343010:intron 40.0%
!! TTATGATGGATATACCGGCA+AGG - chr3_1:1038012-1038031 Msa0343010:intron 40.0%
TTCTCGTGACCTATTAAAGG+AGG - chr3_1:1038335-1038354 Msa0343010:CDS 40.0%
ATCTTGCCAAGCAGGAATTT+AGG - chr3_1:1038557-1038576 Msa0343010:intron 40.0%
GCAAAACCTAAATTCCTGCT+TGG + chr3_1:1038566-1038585 None:intergenic 40.0%
TAACCTGGAAGAACCAATGA+AGG + chr3_1:1038609-1038628 None:intergenic 40.0%
!! GGTTTAGCTGTGTTTTTGCA+AGG + chr3_1:1038648-1038667 None:intergenic 40.0%
AAACACAGCTAAACCAGTCT+CGG - chr3_1:1038653-1038672 Msa0343010:CDS 40.0%
!! ATAAAACTGTTCTGGGACAG+TGG + chr3_1:1038749-1038768 None:intergenic 40.0%
! TGCCACTTATATTCGTCAAC+TGG + chr3_1:1039501-1039520 None:intergenic 40.0%
CGAATATAAGTGGCAACCTA+TGG - chr3_1:1039506-1039525 Msa0343010:intron 40.0%
ATATAAGTGGCAACCTATGG+GGG - chr3_1:1039509-1039528 Msa0343010:intron 40.0%
CCAGCAAATAAATGCTGCAA+TGG + chr3_1:1039552-1039571 None:intergenic 40.0%
CCATTGCAGCATTTATTTGC+TGG - chr3_1:1039549-1039568 Msa0343010:intron 40.0%
!!! ACTGGTTTTAGAGCCAAAGA+AGG - chr3_1:1039874-1039893 Msa0343010:CDS 40.0%
!!! CTGGTTTTAGAGCCAAAGAA+GGG - chr3_1:1039875-1039894 Msa0343010:CDS 40.0%
TCTATACCCTTCCATCATTC+AGG - chr3_1:1039937-1039956 Msa0343010:intron 40.0%
TAGACAAAATGCCAAAGGAG+TGG + chr3_1:1040010-1040029 None:intergenic 40.0%
ACTTATCTGCTTCACCTCTA+TGG - chr3_1:1040038-1040057 Msa0343010:intron 40.0%
CTGCCATCTAGTAAAACAAC+TGG - chr3_1:1040168-1040187 Msa0343010:intron 40.0%
TTGCCAGAGGTAAAAATGCA+CGG - chr3_1:1040195-1040214 Msa0343010:CDS 40.0%
! TATCCGTGCATTTTTACCTC+TGG + chr3_1:1040201-1040220 None:intergenic 40.0%
GTGCTAGTTGCTGAAAAAAC+TGG - chr3_1:1041210-1041229 Msa0343010:intron 40.0%
! CTGCCAACAGGTTTTTATCT+TGG - chr3_1:1041326-1041345 Msa0343010:intron 40.0%
GGTGTATGATGCAGTATGTA+TGG - chr3_1:1041422-1041441 Msa0343010:intron 40.0%
TCCCTGTATGACATCAAACA+TGG + chr3_1:1041603-1041622 None:intergenic 40.0%
TGTTTGATGTCATACAGGGA+AGG - chr3_1:1041603-1041622 Msa0343010:intron 40.0%
GTTTGATGTCATACAGGGAA+GGG - chr3_1:1041604-1041623 Msa0343010:intron 40.0%
!! ACGAGGTCATTTGATTTGAC+TGG - chr3_1:1041728-1041747 Msa0343010:intron 40.0%
! TTGATTTGACTGGTTGTGTG+TGG - chr3_1:1041738-1041757 Msa0343010:intron 40.0%
ACTGTCTTGTAGGTGATCTA+TGG - chr3_1:1041781-1041800 Msa0343010:intron 40.0%
GAACCTATATGATGAACTCG+TGG - chr3_1:1041921-1041940 Msa0343010:intron 40.0%
TCACCACGAGTTCATCATAT+AGG + chr3_1:1041927-1041946 None:intergenic 40.0%
TATGATGAACTCGTGGTGAT+TGG - chr3_1:1041928-1041947 Msa0343010:intron 40.0%
ATGATGAACTCGTGGTGATT+GGG - chr3_1:1041929-1041948 Msa0343010:intron 40.0%
GGTAAAAGGCTGGAAAAGTT+TGG + chr3_1:1042004-1042023 None:intergenic 40.0%
TATAGTCTATTTCATGGGGG+GGG + chr3_1:1042036-1042055 None:intergenic 40.0%
TGTAATAGCAAACTCGCTGA+TGG + chr3_1:1042134-1042153 None:intergenic 40.0%
GCACCATATGTTAATCCTAC+TGG + chr3_1:1042438-1042457 None:intergenic 40.0%
GTAGGATTAACATATGGTGC+AGG - chr3_1:1042438-1042457 Msa0343010:intron 40.0%
! TTGACTCAAATTTTGTCGGG+AGG - chr3_1:1042535-1042554 Msa0343010:CDS 40.0%
! TGACTCAAATTTTGTCGGGA+GGG - chr3_1:1042536-1042555 Msa0343010:CDS 40.0%
TATGTTACCATTGCACACTC+TGG - chr3_1:1042559-1042578 Msa0343010:CDS 40.0%
TTTGGCATCAGGATATGCTT+CGG + chr3_1:1043107-1043126 None:intergenic 40.0%
!!! AAGAACATGTGGCTGGTTTT+TGG + chr3_1:1043125-1043144 None:intergenic 40.0%
TTCTGATCTGCTCAATTCTG+AGG - chr3_1:1043201-1043220 Msa0343010:intron 40.0%
GCACAAAGATTGAAGCAACA+AGG - chr3_1:1043251-1043270 Msa0343010:intron 40.0%
GCTCACAGCAAATTACGTAA+GGG + chr3_1:1043310-1043329 None:intergenic 40.0%
TGCTCACAGCAAATTACGTA+AGG + chr3_1:1043311-1043330 None:intergenic 40.0%
!! TTACGTAATTTGCTGTGAGC+AGG - chr3_1:1043310-1043329 Msa0343010:CDS 40.0%
! GCATCGGGTATTTGAAATTC+AGG - chr3_1:1043388-1043407 Msa0343010:intron 40.0%
TTTCAATTCATCCGGATGTC+TGG + chr3_1:1043499-1043518 None:intergenic 40.0%
GGATGAATTGAAACGAGAAC+AGG - chr3_1:1043506-1043525 Msa0343010:intron 40.0%
ACGTCTTTGTGCATCAATTC+AGG - chr3_1:1043671-1043690 Msa0343010:intron 40.0%
CGTCTTTGTGCATCAATTCA+GGG - chr3_1:1043672-1043691 Msa0343010:intron 40.0%
AACAATCAGCCAGTCTTTCA+GGG + chr3_1:1043704-1043723 None:intergenic 40.0%
AAACAATCAGCCAGTCTTTC+AGG + chr3_1:1043705-1043724 None:intergenic 40.0%
! GAAAGACTGGCTGATTGTTT+AGG - chr3_1:1043705-1043724 Msa0343010:intron 40.0%
! TTTAGGGCTTGACACATCAA+AGG - chr3_1:1043722-1043741 Msa0343010:intron 40.0%
TCAAATACACTAGAGCAGCT+GGG + chr3_1:1044190-1044209 None:intergenic 40.0%
! CTGATTGGCTATAATTGCAG+GGG + chr3_1:1044350-1044369 None:intergenic 40.0%
! CCTGATTGGCTATAATTGCA+GGG + chr3_1:1044351-1044370 None:intergenic 40.0%
! ACCTGATTGGCTATAATTGC+AGG + chr3_1:1044352-1044371 None:intergenic 40.0%
ATCTTAGCAGATTATCACGC+TGG - chr3_1:1044462-1044481 Msa0343010:CDS 40.0%
TCTGCTTATTGCTTCATGTC+AGG - chr3_1:1044536-1044555 Msa0343010:CDS 40.0%
TTGCTTCATGTCAGGTCAAA+CGG - chr3_1:1044544-1044563 Msa0343010:CDS 40.0%
CAACGGGCATCTTAATAGAA+AGG - chr3_1:1044794-1044813 Msa0343010:CDS 40.0%
GATGCAGCAAGATCAACTAT+TGG + chr3_1:1045270-1045289 None:intergenic 40.0%
ATTTCTGCCCTAATGAACCA+AGG + chr3_1:1045494-1045513 None:intergenic 40.0%
AGAGAGAGAGATAGCAATGG+CGG - chr3_1:1032929-1032948 Msa0343010:three_prime_UTR 45.0%
!!! CGTAGATAGGGTTTTCGAGT+CGG + chr3_1:1033082-1033101 None:intergenic 45.0%
CAGGGATTGTGTCGTAGATA+GGG + chr3_1:1033094-1033113 None:intergenic 45.0%
TCAGGGATTGTGTCGTAGAT+AGG + chr3_1:1033095-1033114 None:intergenic 45.0%
TATCTACGACACAATCCCTG+AGG - chr3_1:1033094-1033113 Msa0343010:three_prime_UTR 45.0%
TGAATGAGCGGGATTGTTCA+CGG + chr3_1:1033148-1033167 None:intergenic 45.0%
GTCATCAACGATGAATGAGC+GGG + chr3_1:1033159-1033178 None:intergenic 45.0%
CGTCATCAACGATGAATGAG+CGG + chr3_1:1033160-1033179 None:intergenic 45.0%
!! ATCGTTGATGACGACGGATT+TGG - chr3_1:1033167-1033186 Msa0343010:CDS 45.0%
! GGATTTGGTTACAACGACGA+AGG - chr3_1:1033182-1033201 Msa0343010:CDS 45.0%
CGAATTCTTCGTCTGAGGAA+AGG + chr3_1:1033241-1033260 None:intergenic 45.0%
TGTTCTTAAGGAGTTTGCGC+CGG - chr3_1:1033454-1033473 Msa0343010:intron 45.0%
ACAGATTTAGCAGAGGGCTT+AGG + chr3_1:1033560-1033579 None:intergenic 45.0%
CTCTAACCCTAACCCTATTC+TGG + chr3_1:1033681-1033700 None:intergenic 45.0%
CAGAATAGGGTTAGGGTTAG+AGG - chr3_1:1033679-1033698 Msa0343010:intron 45.0%
GAGAGTTTGGGAAATTGCGA+GGG - chr3_1:1033725-1033744 Msa0343010:CDS 45.0%
! GTGGTGGAAGGTAATGAATG+TGG - chr3_1:1033755-1033774 Msa0343010:CDS 45.0%
AGTTGAAGAGAAAGTGGCGA+AGG - chr3_1:1033790-1033809 Msa0343010:CDS 45.0%
GAAACCTGTTGTGAAGAAGG+AGG - chr3_1:1033835-1033854 Msa0343010:intron 45.0%
AAACCCTCCTTCTTCACAAC+AGG + chr3_1:1033842-1033861 None:intergenic 45.0%
!! GGAGTTTAATTTGGATCCGG+AGG - chr3_1:1033997-1034016 Msa0343010:intron 45.0%
TAAAAAGGCAACGATCCCTC+CGG + chr3_1:1034016-1034035 None:intergenic 45.0%
! TTGCCATGTTGATGAGACCT+TGG + chr3_1:1034658-1034677 None:intergenic 45.0%
CTCAAGCTGTATCATCTCAC+TGG + chr3_1:1034941-1034960 None:intergenic 45.0%
CAGGAGAAATTCGAGACTCT+TGG + chr3_1:1034972-1034991 None:intergenic 45.0%
GGGTGTTTCTTCCTTTAGCA+TGG - chr3_1:1035199-1035218 Msa0343010:CDS 45.0%
! CTTAACAGGTGCCATGCTAA+AGG + chr3_1:1035213-1035232 None:intergenic 45.0%
CTTTAGCATGGCACCTGTTA+AGG - chr3_1:1035211-1035230 Msa0343010:CDS 45.0%
TCCTCTGCAAAATGAGCACA+GGG + chr3_1:1035331-1035350 None:intergenic 45.0%
TTCCTCTGCAAAATGAGCAC+AGG + chr3_1:1035332-1035351 None:intergenic 45.0%
!! CTTTCTCCTTTGAGGTCTAC+TGG + chr3_1:1035567-1035586 None:intergenic 45.0%
AACTCAAGTGCACTGCATGT+GGG + chr3_1:1035901-1035920 None:intergenic 45.0%
TAACTCAAGTGCACTGCATG+TGG + chr3_1:1035902-1035921 None:intergenic 45.0%
GAAAGATTATGGGGCCTTCA+TGG - chr3_1:1035935-1035954 Msa0343010:intron 45.0%
TCGACTCTCCTAAAGACATC+AGG - chr3_1:1036139-1036158 Msa0343010:intron 45.0%
TTATTGCTGTGACAACCACG+GGG + chr3_1:1036197-1036216 None:intergenic 45.0%
GTAAAATGGGTCAGCATTCC+AGG + chr3_1:1037369-1037388 None:intergenic 45.0%
GGGATTCAATAAGGAGGTCA+CGG - chr3_1:1037425-1037444 Msa0343010:intron 45.0%
TTCTGTGTGTTGAAAGCAGG+TGG - chr3_1:1037475-1037494 Msa0343010:intron 45.0%
CAATCCTGGAAGCAAGCATA+TGG + chr3_1:1037612-1037631 None:intergenic 45.0%
ATGGATAGCGACGTTCTTGT+TGG - chr3_1:1037699-1037718 Msa0343010:intron 45.0%
CTTCTACACAGATCTCAGGT+AGG - chr3_1:1037753-1037772 Msa0343010:intron 45.0%
AGTTTAGACCACATGCTGCT+TGG + chr3_1:1038192-1038211 None:intergenic 45.0%
AAGCAGCATGTGGTCTAAAC+TGG - chr3_1:1038191-1038210 Msa0343010:intron 45.0%
AGCAGCATGTGGTCTAAACT+GGG - chr3_1:1038192-1038211 Msa0343010:intron 45.0%
GCATTGTAGAACGGTTGAGA+CGG + chr3_1:1038218-1038237 None:intergenic 45.0%
! CGAGCTTAGGCATTGTAGAA+CGG + chr3_1:1038227-1038246 None:intergenic 45.0%
ATGCCTAAGCTCGATAGAAG+AGG - chr3_1:1038234-1038253 Msa0343010:intron 45.0%
TTGCCTCTTCTATCGAGCTT+AGG + chr3_1:1038240-1038259 None:intergenic 45.0%
GCAACACAAGACATGATAGC+AGG + chr3_1:1038285-1038304 None:intergenic 45.0%
GCTATCATGTCTTGTGTTGC+CGG - chr3_1:1038285-1038304 Msa0343010:intron 45.0%
! GGAACCCATTTTCAAAGCGT+GGG + chr3_1:1038450-1038469 None:intergenic 45.0%
! TGGAACCCATTTTCAAAGCG+TGG + chr3_1:1038451-1038470 None:intergenic 45.0%
GTTGAGAAATCTTGCCAAGC+AGG - chr3_1:1038549-1038568 Msa0343010:intron 45.0%
!! CTACCTTCATTGGTTCTTCC+AGG - chr3_1:1038603-1038622 Msa0343010:CDS 45.0%
! CCATCAGGGATTTTGCAGTT+TGG + chr3_1:1038714-1038733 None:intergenic 45.0%
CCAAACTGCAAAATCCCTGA+TGG - chr3_1:1038711-1038730 Msa0343010:CDS 45.0%
AAATCCCTGATGGAGCTAGT+AGG - chr3_1:1038721-1038740 Msa0343010:CDS 45.0%
AATATGGGGAAACGGATGCA+TGG - chr3_1:1039428-1039447 Msa0343010:intron 45.0%
AACGGATGCATGGTTGTCAA+TGG - chr3_1:1039438-1039457 Msa0343010:intron 45.0%
CGCCAGTTGACGAATATAAG+TGG - chr3_1:1039496-1039515 Msa0343010:intron 45.0%
ATACACGATGTAGCAGTTGG+AGG - chr3_1:1039586-1039605 Msa0343010:intron 45.0%
!! GTTTTCTATTTCAGGGTGCC+CGG - chr3_1:1039621-1039640 Msa0343010:intron 45.0%
!! TTTTCTATTTCAGGGTGCCC+GGG - chr3_1:1039622-1039641 Msa0343010:intron 45.0%
!! GTAACTCATGGTGTCGATGA+TGG - chr3_1:1039752-1039771 Msa0343010:intron 45.0%
AAAAAGGCTGCTTCCTATGC+TGG - chr3_1:1039848-1039867 Msa0343010:CDS 45.0%
TAAAACCAGTCCTCCAGCAT+AGG + chr3_1:1039864-1039883 None:intergenic 45.0%
AACTTACTGAACTGCATCGC+AGG - chr3_1:1040089-1040108 Msa0343010:intron 45.0%
! GTTTTACTAGATGGCAGACG+AGG + chr3_1:1040165-1040184 None:intergenic 45.0%
ACTAAGAACGGCAGCTAAGA+TGG + chr3_1:1040528-1040547 None:intergenic 45.0%
GACCAAGAATGGCACATTCA+AGG - chr3_1:1041009-1041028 Msa0343010:intron 45.0%
! GACCTTGAATGTGCCATTCT+TGG + chr3_1:1041014-1041033 None:intergenic 45.0%
AACAAATCTCTGCAGTCTCC+AGG + chr3_1:1041161-1041180 None:intergenic 45.0%
TATGTGGAGGCGAGACAAAA+AGG - chr3_1:1041234-1041253 Msa0343010:intron 45.0%
! GCATCGATGAAAACTGCATC+TGG - chr3_1:1041256-1041275 Msa0343010:intron 45.0%
! TGGTCTTAAACGTCAGCAAC+TGG - chr3_1:1041276-1041295 Msa0343010:intron 45.0%
! TTTTGAGCACTCGGAACTAG+AGG + chr3_1:1041362-1041381 None:intergenic 45.0%
ATGCAGTATGTATGGATGCC+TGG - chr3_1:1041430-1041449 Msa0343010:intron 45.0%
TGCAGTATGTATGGATGCCT+GGG - chr3_1:1041431-1041450 Msa0343010:intron 45.0%
AAGGAACTTCACGCAGCTAA+TGG + chr3_1:1041900-1041919 None:intergenic 45.0%
ATAGTCTATTTCATGGGGGG+GGG + chr3_1:1042035-1042054 None:intergenic 45.0%
TAAAGATGGCACCCCATATG+AGG - chr3_1:1042364-1042383 Msa0343010:CDS 45.0%
GTGCAGGTTATTGAACGCAA+AGG - chr3_1:1042454-1042473 Msa0343010:intron 45.0%
AGAATAGCCAGAGTGTGCAA+TGG + chr3_1:1042569-1042588 None:intergenic 45.0%
CTTCGCATGACCTATAAGCA+CGG + chr3_1:1042638-1042657 None:intergenic 45.0%
ACCACCCTGCTATAGCATTT+GGG + chr3_1:1042792-1042811 None:intergenic 45.0%
AACCACCCTGCTATAGCATT+TGG + chr3_1:1042793-1042812 None:intergenic 45.0%
! GGATATGCATCAAGGCATCT+GGG + chr3_1:1042821-1042840 None:intergenic 45.0%
! TGGATATGCATCAAGGCATC+TGG + chr3_1:1042822-1042841 None:intergenic 45.0%
!! GAGAAGGCGTTAGAGTTTGT+TGG - chr3_1:1042905-1042924 Msa0343010:intron 45.0%
ACTAGCATTCAATGGTTGGC+TGG + chr3_1:1043001-1043020 None:intergenic 45.0%
TTGGCATCAGGATATGCTTC+GGG + chr3_1:1043106-1043125 None:intergenic 45.0%
TGCTTACAAGAACATGTGGC+TGG + chr3_1:1043132-1043151 None:intergenic 45.0%
GCCACATGTTCTTGTAAGCA+CGG - chr3_1:1043132-1043151 Msa0343010:CDS 45.0%
TCCGTGCTTACAAGAACATG+TGG + chr3_1:1043136-1043155 None:intergenic 45.0%
AAGCAACAAGGTTACGCATC+TGG - chr3_1:1043263-1043282 Msa0343010:intron 45.0%
TTTGAGTAGGGCGGTAATTC+AGG - chr3_1:1043447-1043466 Msa0343010:intron 45.0%
! TGGTTTGTCTCAGCATTCAG+AGG - chr3_1:1043752-1043771 Msa0343010:intron 45.0%
! TTGCTGGTGATGATGATGAG+AGG - chr3_1:1043886-1043905 Msa0343010:intron 45.0%
CAAATACACTAGAGCAGCTG+GGG + chr3_1:1044189-1044208 None:intergenic 45.0%
GTCAAATACACTAGAGCAGC+TGG + chr3_1:1044191-1044210 None:intergenic 45.0%
AATGAAAAGCCAACCAGCTC+AGG - chr3_1:1044247-1044266 Msa0343010:intron 45.0%
CCCTGCAATTATAGCCAATC+AGG - chr3_1:1044348-1044367 Msa0343010:intron 45.0%
! CTGCCATTTCAGCCATATGA+AGG - chr3_1:1044414-1044433 Msa0343010:intron 45.0%
ACACGTTTCATCGTCACACT+GGG + chr3_1:1044694-1044713 None:intergenic 45.0%
TACACGTTTCATCGTCACAC+TGG + chr3_1:1044695-1044714 None:intergenic 45.0%
! TCGAAGTGTCAGCTTTCGTT+TGG - chr3_1:1044725-1044744 Msa0343010:CDS 45.0%
AGTGTCAGCTTTCGTTTGGT+TGG - chr3_1:1044729-1044748 Msa0343010:CDS 45.0%
CCAAATTATCCTCGCTGCAA+CGG - chr3_1:1044777-1044796 Msa0343010:CDS 45.0%
CAAATTATCCTCGCTGCAAC+GGG - chr3_1:1044778-1044797 Msa0343010:CDS 45.0%
GGATGCTAGGACATGCTTAA+TGG - chr3_1:1045022-1045041 Msa0343010:CDS 45.0%
! GTCTAGGATACCGATAGAGA+AGG - chr3_1:1045227-1045246 Msa0343010:CDS 45.0%
GCAGCTGGACAAACTGAATT+TGG + chr3_1:1045381-1045400 None:intergenic 45.0%
TGGATTCACATATGAGCAGC+TGG + chr3_1:1045396-1045415 None:intergenic 45.0%
TATGTGAATCCACACCAGCA+AGG - chr3_1:1045404-1045423 Msa0343010:CDS 45.0%
ATGTGAATCCACACCAGCAA+GGG - chr3_1:1045405-1045424 Msa0343010:CDS 45.0%
! GTAGCTTGCAAGTGAAGCTA+TGG - chr3_1:1045432-1045451 Msa0343010:CDS 45.0%
AAGTGTTACAGCCACATCCT+TGG - chr3_1:1045474-1045493 Msa0343010:CDS 45.0%
AGCCACATCCTTGGTTCATT+AGG - chr3_1:1045483-1045502 Msa0343010:CDS 45.0%
GCCACATCCTTGGTTCATTA+GGG - chr3_1:1045484-1045503 Msa0343010:CDS 45.0%
!! ATTATTAAATTAAGTATAAT+AGG - chr3_1:1038063-1038082 Msa0343010:intron 5.0%
!! CAAAAAAATTATATAAAAAA+AGG + chr3_1:1038776-1038795 None:intergenic 5.0%
!!! AAAGAAAAATTAAAATTTTA+GGG + chr3_1:1040895-1040914 None:intergenic 5.0%
!! ATCGGAGAAGCTCTAAGGCT+TGG + chr3_1:1033016-1033035 None:intergenic 50.0%
!! TTTGTGGTGTGGTGGTGGAT+CGG + chr3_1:1033058-1033077 None:intergenic 50.0%
TTCGAGTCGGATTTGTGGTG+TGG + chr3_1:1033069-1033088 None:intergenic 50.0%
!!! GGGTTTTCGAGTCGGATTTG+TGG + chr3_1:1033074-1033093 None:intergenic 50.0%
AGGCGGTGTATTCTTCCTCA+GGG + chr3_1:1033112-1033131 None:intergenic 50.0%
AAGGCGGTGTATTCTTCCTC+AGG + chr3_1:1033113-1033132 None:intergenic 50.0%
ACGAAGGCGAAGAAGAGGAT+TGG - chr3_1:1033198-1033217 Msa0343010:CDS 50.0%
!! GAAGAGGATTGGTCCAAAGC+CGG - chr3_1:1033209-1033228 Msa0343010:CDS 50.0%
GTCTGAGGAAAGGGAGAAAC+CGG + chr3_1:1033231-1033250 None:intergenic 50.0%
GCCGCAGAAGAAGAAACAGA+AGG + chr3_1:1033320-1033339 None:intergenic 50.0%
ATCAGCTGCTGCTGCTATGA+TGG - chr3_1:1033346-1033365 Msa0343010:intron 50.0%
TCAGCTGCTGCTGCTATGAT+GGG - chr3_1:1033347-1033366 Msa0343010:intron 50.0%
CGAGAGTTTGGGAAATTGCG+AGG - chr3_1:1033724-1033743 Msa0343010:CDS 50.0%
AGTTTGGGAAATTGCGAGGG+AGG - chr3_1:1033728-1033747 Msa0343010:CDS 50.0%
AAATTGCGAGGGAGGAATGG+TGG - chr3_1:1033736-1033755 Msa0343010:CDS 50.0%
GTGCCAAGGTCTCATCAACA+TGG - chr3_1:1034652-1034671 Msa0343010:CDS 50.0%
AATGCAACCCGGCTTTCTGT+TGG + chr3_1:1034737-1034756 None:intergenic 50.0%
! ACCCTGTGCTCATTTTGCAG+AGG - chr3_1:1035327-1035346 Msa0343010:intron 50.0%
GAACGAACAGACATTCCTGC+AGG - chr3_1:1035362-1035381 Msa0343010:intron 50.0%
GCACTTCCAGTAGACCTCAA+AGG - chr3_1:1035558-1035577 Msa0343010:intron 50.0%
CTCTTCTTGGAGCTCGAAAC+AGG - chr3_1:1035595-1035614 Msa0343010:intron 50.0%
ACTCAAGTGCACTGCATGTG+GGG + chr3_1:1035900-1035919 None:intergenic 50.0%
TACCTGCTCAGCATCCCAAA+GGG - chr3_1:1035978-1035997 Msa0343010:CDS 50.0%
TATTGCTGTGACAACCACGG+GGG + chr3_1:1036196-1036215 None:intergenic 50.0%
!! TTCCACTCTGAAGCCAGCAT+AGG + chr3_1:1037342-1037361 None:intergenic 50.0%
! GTAGAGTACCAAGCAGCATG+TGG - chr3_1:1038181-1038200 Msa0343010:intron 50.0%
TCATGTCTTGTGTTGCCGGT+CGG - chr3_1:1038289-1038308 Msa0343010:intron 50.0%
CGTATCACAAAGAAGCCGAC+CGG + chr3_1:1038307-1038326 None:intergenic 50.0%
!! TGGGTCCCACGCTTTGAAAA+TGG - chr3_1:1038442-1038461 Msa0343010:intron 50.0%
!! GGGTCCCACGCTTTGAAAAT+GGG - chr3_1:1038443-1038462 Msa0343010:intron 50.0%
ACAGCTAAACCAGTCTCGGA+AGG - chr3_1:1038657-1038676 Msa0343010:CDS 50.0%
! CCTGAAGAGTTTTCCCCCAT+AGG + chr3_1:1039525-1039544 None:intergenic 50.0%
CCTATGGGGGAAAACTCTTC+AGG - chr3_1:1039522-1039541 Msa0343010:intron 50.0%
ACGAAGCGCAGAGTAACTCA+TGG - chr3_1:1039740-1039759 Msa0343010:intron 50.0%
!! CAAAGGAGTGGAAGTGTCAC+AGG + chr3_1:1039998-1040017 None:intergenic 50.0%
CTGTGACACTTCCACTCCTT+TGG - chr3_1:1039996-1040015 Msa0343010:intron 50.0%
AACAACTGGAGTCTTGCCAG+AGG - chr3_1:1040182-1040201 Msa0343010:CDS 50.0%
!! AGCTGCCGTTCTTAGTCTTG+TGG - chr3_1:1040532-1040551 Msa0343010:intron 50.0%
GCTGGCCACAAGACTAAGAA+CGG + chr3_1:1040540-1040559 None:intergenic 50.0%
! GGTGATTTTCTTTCCCCTCC+TGG - chr3_1:1041140-1041159 Msa0343010:CDS 50.0%
AATCTCTGCAGTCTCCAGGA+GGG + chr3_1:1041157-1041176 None:intergenic 50.0%
AAATCTCTGCAGTCTCCAGG+AGG + chr3_1:1041158-1041177 None:intergenic 50.0%
CACTGAAGCTTACTGCCAAC+AGG - chr3_1:1041314-1041333 Msa0343010:intron 50.0%
TAGTCTATTTCATGGGGGGG+GGG + chr3_1:1042034-1042053 None:intergenic 50.0%
ACTCGCTGATGGCAAGAAAC+AGG + chr3_1:1042123-1042142 None:intergenic 50.0%
TTGATATTGTCCGCCGTGAC+TGG - chr3_1:1042479-1042498 Msa0343010:intron 50.0%
TCGCTAACAAGCTCCAGTCA+CGG + chr3_1:1042495-1042514 None:intergenic 50.0%
ATTGCGGCTTCCGTGCTTAT+AGG - chr3_1:1042625-1042644 Msa0343010:intron 50.0%
TTGGGCCCAAATGCTATAGC+AGG - chr3_1:1042784-1042803 Msa0343010:intron 50.0%
TGGGCCCAAATGCTATAGCA+GGG - chr3_1:1042785-1042804 Msa0343010:intron 50.0%
GAGGAACGGACAAGTAGCAT+TGG - chr3_1:1043045-1043064 Msa0343010:intron 50.0%
!!! TGTGGCTGGTTTTTGGCATC+AGG + chr3_1:1043118-1043137 None:intergenic 50.0%
TACGCATCTGGTTGCTCTGT+TGG - chr3_1:1043275-1043294 Msa0343010:intron 50.0%
TCTGGCACGTAGAGCAATTC+CGG + chr3_1:1043481-1043500 None:intergenic 50.0%
TGAAACGAGAACAGGGGACA+TGG - chr3_1:1043514-1043533 Msa0343010:CDS 50.0%
TTGTCACAACAGGTGCCTTG+CGG - chr3_1:1043558-1043577 Msa0343010:CDS 50.0%
CCACAGGATGAATCTGCAAG+AGG + chr3_1:1043647-1043666 None:intergenic 50.0%
CCTCTTGCAGATTCATCCTG+TGG - chr3_1:1043644-1043663 Msa0343010:CDS 50.0%
GCACAAAGACGTGATACCAC+AGG + chr3_1:1043663-1043682 None:intergenic 50.0%
!! TTGGTTGGTGATTCTGAGCG+AGG - chr3_1:1044744-1044763 Msa0343010:CDS 50.0%
CCGTTGCAGCGAGGATAATT+TGG + chr3_1:1044780-1044799 None:intergenic 50.0%
AGGTATGTCACTGGGATGCT+AGG - chr3_1:1045009-1045028 Msa0343010:CDS 50.0%
ACCAGATGGAGGCAAAGTCT+AGG - chr3_1:1045211-1045230 Msa0343010:CDS 50.0%
TCCTAGACTTTGCCTCCATC+TGG + chr3_1:1045215-1045234 None:intergenic 50.0%
GCCCTAATGAACCAAGGATG+TGG + chr3_1:1045488-1045507 None:intergenic 50.0%
!! ATAGCAATGGCGGACGACGA+CGG - chr3_1:1032939-1032958 Msa0343010:three_prime_UTR 55.0%
!! TTGTGGTGTGGTGGTGGATC+GGG + chr3_1:1033057-1033076 None:intergenic 55.0%
TCGGATTTGTGGTGTGGTGG+TGG + chr3_1:1033063-1033082 None:intergenic 55.0%
GAGTCGGATTTGTGGTGTGG+TGG + chr3_1:1033066-1033085 None:intergenic 55.0%
ATGAGCGGGATTGTTCACGG+CGG + chr3_1:1033145-1033164 None:intergenic 55.0%
CAACGACGAAGGCGAAGAAG+AGG - chr3_1:1033193-1033212 Msa0343010:CDS 55.0%
! GGAAAGGGAGAAACCGGCTT+TGG + chr3_1:1033225-1033244 None:intergenic 55.0%
GGGAAATTGCGAGGGAGGAA+TGG - chr3_1:1033733-1033752 Msa0343010:CDS 55.0%
CCAGCAGTAGCACACAGCTT+CGG + chr3_1:1033902-1033921 None:intergenic 55.0%
! AGCTGTGTGCTACTGCTGGA+TGG - chr3_1:1033903-1033922 Msa0343010:intron 55.0%
ACTTGGCGCCAACAGAAAGC+CGG - chr3_1:1034726-1034745 Msa0343010:intron 55.0%
CTACCTGCTCAGCATCCCAA+AGG - chr3_1:1035977-1035996 Msa0343010:CDS 55.0%
ATTGCTGTGACAACCACGGG+GGG + chr3_1:1036195-1036214 None:intergenic 55.0%
!! CTCCTATGCTGGCTTCAGAG+TGG - chr3_1:1037337-1037356 Msa0343010:intron 55.0%
GCTTCAGAGTGGAAGAGACC+TGG - chr3_1:1037348-1037367 Msa0343010:intron 55.0%
GAGCAACTTCCTTCCGAGAC+TGG + chr3_1:1038669-1038688 None:intergenic 55.0%
GGCACCTACTAGCTCCATCA+GGG + chr3_1:1038728-1038747 None:intergenic 55.0%
TGGCACCTACTAGCTCCATC+AGG + chr3_1:1038729-1038748 None:intergenic 55.0%
TCAACTGGCGTGTGAGAGGA+AGG + chr3_1:1039486-1039505 None:intergenic 55.0%
TTCGTCAACTGGCGTGTGAG+AGG + chr3_1:1039490-1039509 None:intergenic 55.0%
AAGGCTGCTTCCTATGCTGG+AGG - chr3_1:1039851-1039870 Msa0343010:CDS 55.0%
TGCTTCCTATGCTGGAGGAC+TGG - chr3_1:1039856-1039875 Msa0343010:CDS 55.0%
ATCTCTGCAGTCTCCAGGAG+GGG + chr3_1:1041156-1041175 None:intergenic 55.0%
AGCACTCGGAACTAGAGGCT+GGG + chr3_1:1041357-1041376 None:intergenic 55.0%
AGGGTAATGAGCTCAGCCAG+CGG + chr3_1:1041485-1041504 None:intergenic 55.0%
AGTCTATTTCATGGGGGGGG+GGG + chr3_1:1042033-1042052 None:intergenic 55.0%
CTAACAAGCTCCAGTCACGG+CGG + chr3_1:1042492-1042511 None:intergenic 55.0%
GCCCAAATGCTATAGCAGGG+TGG - chr3_1:1042788-1042807 Msa0343010:intron 55.0%
GCATCAGGATATGCTTCGGG+TGG + chr3_1:1043103-1043122 None:intergenic 55.0%
GGTAATTCAGGCAGTGCGAC+CGG - chr3_1:1043459-1043478 Msa0343010:intron 55.0%
TGCTCTACGTGCCAGACATC+CGG - chr3_1:1043485-1043504 Msa0343010:intron 55.0%
GTATCAGGGATGTGAGCCGT+TGG - chr3_1:1044153-1044172 Msa0343010:intron 55.0%
CTGGGGCATGACAAGACCAA+CGG + chr3_1:1044172-1044191 None:intergenic 55.0%
TTAAGATGCCCGTTGCAGCG+AGG + chr3_1:1044789-1044808 None:intergenic 55.0%
ATCAGGGACCGTTGTGCCTT+TGG - chr3_1:1045303-1045322 Msa0343010:CDS 55.0%
TCAGGGACCGTTGTGCCTTT+GGG - chr3_1:1045304-1045323 Msa0343010:CDS 55.0%
! TCACCCACCCAAAGGCACAA+CGG + chr3_1:1045314-1045333 None:intergenic 55.0%
CTACAACACCCTTGCTGGTG+TGG + chr3_1:1045416-1045435 None:intergenic 55.0%
GCAAGCTACAACACCCTTGC+TGG + chr3_1:1045421-1045440 None:intergenic 55.0%
AGGAAGCGAAGACCAACCCG+AGG - chr3_1:1032969-1032988 Msa0343010:three_prime_UTR 60.0%
!! CTCTAAGGCTTGGCTGCGTG+CGG + chr3_1:1033006-1033025 None:intergenic 60.0%
GCGGGATCGGAGAAGCTCTA+AGG + chr3_1:1033021-1033040 None:intergenic 60.0%
CTCCGATCCCGCAGATCCAA+CGG - chr3_1:1033029-1033048 Msa0343010:three_prime_UTR 60.0%
GACCGTTGGATCTGCGGGAT+CGG + chr3_1:1033034-1033053 None:intergenic 60.0%
ATCGGGGACCGTTGGATCTG+CGG + chr3_1:1033040-1033059 None:intergenic 60.0%
!! TGTGGTGTGGTGGTGGATCG+GGG + chr3_1:1033056-1033075 None:intergenic 60.0%
TTCACGGCGGCTAGCGACTA+AGG + chr3_1:1033132-1033151 None:intergenic 60.0%
! GCTGCTGCTGCTATGATGGG+CGG - chr3_1:1033350-1033369 Msa0343010:intron 60.0%
TTGCGAGGGAGGAATGGTGG+TGG - chr3_1:1033739-1033758 Msa0343010:CDS 60.0%
!! GAGGGAGGAATGGTGGTGGA+AGG - chr3_1:1033743-1033762 Msa0343010:CDS 60.0%
! CCGAAGCTGTGTGCTACTGC+TGG - chr3_1:1033899-1033918 Msa0343010:intron 60.0%
! GTGTGCTACTGCTGGATGGC+AGG - chr3_1:1033907-1033926 Msa0343010:intron 60.0%
TGCTACTGCTGGATGGCAGG+CGG - chr3_1:1033910-1033929 Msa0343010:intron 60.0%
CTTGGCGCCAACAGAAAGCC+GGG - chr3_1:1034727-1034746 Msa0343010:intron 60.0%
!! CACCCTTTGGGATGCTGAGC+AGG + chr3_1:1035983-1036002 None:intergenic 60.0%
ATACTCCACCCTCTGTGCCC+GGG + chr3_1:1039642-1039661 None:intergenic 60.0%
GATACTCCACCCTCTGTGCC+CGG + chr3_1:1039643-1039662 None:intergenic 60.0%
CACGGTAACACGGCAGCAGT+TGG + chr3_1:1040299-1040318 None:intergenic 60.0%
GAGCACTCGGAACTAGAGGC+TGG + chr3_1:1041358-1041377 None:intergenic 60.0%
TCTATTTCATGGGGGGGGGG+GGG + chr3_1:1042031-1042050 None:intergenic 60.0%
GTCTATTTCATGGGGGGGGG+GGG + chr3_1:1042032-1042051 None:intergenic 60.0%
GGGCACAAGCCCTGAAAGAC+TGG - chr3_1:1043692-1043711 Msa0343010:intron 60.0%
AAAGCCAACCAGCTCAGGCG+CGG - chr3_1:1044252-1044271 Msa0343010:intron 60.0%
GGACCGTTGTGCCTTTGGGT+GGG - chr3_1:1045308-1045327 Msa0343010:CDS 60.0%
CTGCAGCTTCACCCACCCAA+AGG + chr3_1:1045322-1045341 None:intergenic 60.0%
CTTTGGGTGGGTGAAGCTGC+AGG - chr3_1:1045320-1045339 Msa0343010:CDS 60.0%
CGGACGACGACGGTTCAAGC+AGG - chr3_1:1032949-1032968 Msa0343010:three_prime_UTR 65.0%
TAAGGCTTGGCTGCGTGCGG+TGG + chr3_1:1033003-1033022 None:intergenic 65.0%
TCGGGGACCGTTGGATCTGC+GGG + chr3_1:1033039-1033058 None:intergenic 65.0%
ACGGCGGCTAGCGACTAAGG+CGG + chr3_1:1033129-1033148 None:intergenic 65.0%
!! AGGAGTGGTGGTGGTGGAGG+CGG - chr3_1:1033935-1033954 Msa0343010:CDS 65.0%
TATTTCATGGGGGGGGGGGG+GGG + chr3_1:1042029-1042048 None:intergenic 65.0%
CTATTTCATGGGGGGGGGGG+GGG + chr3_1:1042030-1042049 None:intergenic 65.0%
AGATTCCTCCGCGCCTGAGC+TGG + chr3_1:1044263-1044282 None:intergenic 65.0%
GGGACCGTTGTGCCTTTGGG+TGG - chr3_1:1045307-1045326 Msa0343010:CDS 65.0%
!! GGTGGTGGATCGGGGACCGT+TGG + chr3_1:1033048-1033067 None:intergenic 70.0%
!! GCGAGGAGTGGTGGTGGTGG+AGG - chr3_1:1033932-1033951 Msa0343010:CDS 70.0%
!! GGAGTGGTGGTGGTGGAGGC+GGG - chr3_1:1033936-1033955 Msa0343010:CDS 70.0%
!! GAGTGGTGGTGGTGGAGGCG+GGG - chr3_1:1033937-1033956 Msa0343010:CDS 70.0%
CACTCGAGTGACTCCCCCCG+TGG - chr3_1:1036179-1036198 Msa0343010:CDS 70.0%
! TTCAGGGTGCCCGGGCACAG+AGG - chr3_1:1039630-1039649 Msa0343010:intron 70.0%
! TCAGGGTGCCCGGGCACAGA+GGG - chr3_1:1039631-1039650 Msa0343010:intron 70.0%
ATTTCATGGGGGGGGGGGGG+GGG + chr3_1:1042028-1042047 None:intergenic 70.0%
TCCTCCGCGCCTGAGCTGGT+TGG + chr3_1:1044259-1044278 None:intergenic 70.0%
GTGGCGTCAGGGCCTCGGGT+TGG + chr3_1:1032984-1033003 None:intergenic 75.0%
TGCGGTGGCGTCAGGGCCTC+GGG + chr3_1:1032988-1033007 None:intergenic 75.0%
GTGCGGTGGCGTCAGGGCCT+CGG + chr3_1:1032989-1033008 None:intergenic 75.0%
GGCTGCGTGCGGTGGCGTCA+GGG + chr3_1:1032995-1033014 None:intergenic 75.0%
TGGCTGCGTGCGGTGGCGTC+AGG + chr3_1:1032996-1033015 None:intergenic 75.0%
CTGCTGGATGGCAGGCGGCG+AGG - chr3_1:1033915-1033934 Msa0343010:intron 75.0%
GGATGGCAGGCGGCGAGGAG+TGG - chr3_1:1033920-1033939 Msa0343010:CDS 75.0%
TGGCAGGCGGCGAGGAGTGG+TGG - chr3_1:1033923-1033942 Msa0343010:CDS 75.0%
CAGGCGGCGAGGAGTGGTGG+TGG - chr3_1:1033926-1033945 Msa0343010:CDS 75.0%
!! GCGGCGAGGAGTGGTGGTGG+TGG - chr3_1:1033929-1033948 Msa0343010:CDS 75.0%
!! TGGTGGTGGTGGAGGCGGGG+AGG - chr3_1:1033940-1033959 Msa0343010:CDS 75.0%
GGGGGGGGGGGGTAAAAGGC+TGG + chr3_1:1042014-1042033 None:intergenic 75.0%
TTTCATGGGGGGGGGGGGGG+GGG + chr3_1:1042027-1042046 None:intergenic 75.0%
GCCAACCAGCTCAGGCGCGG+AGG - chr3_1:1044255-1044274 Msa0343010:intron 75.0%
! GGGTGCCCGGGCACAGAGGG+TGG - chr3_1:1039634-1039653 Msa0343010:intron 80.0%
! GGGGGGGGGGGGGGGGTAAA+AGG + chr3_1:1042018-1042037 None:intergenic 80.0%
! TTCATGGGGGGGGGGGGGGG+GGG + chr3_1:1042026-1042045 None:intergenic 80.0%
! TCATGGGGGGGGGGGGGGGG+GGG + chr3_1:1042025-1042044 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 1032866 1045662 1032866 ID=Msa0343010;Name=Msa0343010
chr3_1 mRNA 1032866 1045662 1032866 ID=Msa0343010-mRNA-1;Parent=Msa0343010;Name=Msa0343010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=79|1|1|1|1|1|31|300|1544
chr3_1 exon 1032866 1033312 1032866 ID=Msa0343010-mRNA-1:exon:334;Parent=Msa0343010-mRNA-1
chr3_1 exon 1033518 1033592 1033518 ID=Msa0343010-mRNA-1:exon:333;Parent=Msa0343010-mRNA-1
chr3_1 exon 1033713 1033832 1033713 ID=Msa0343010-mRNA-1:exon:332;Parent=Msa0343010-mRNA-1
chr3_1 exon 1033917 1033970 1033917 ID=Msa0343010-mRNA-1:exon:331;Parent=Msa0343010-mRNA-1
chr3_1 exon 1034159 1034375 1034159 ID=Msa0343010-mRNA-1:exon:330;Parent=Msa0343010-mRNA-1
chr3_1 exon 1034621 1034694 1034621 ID=Msa0343010-mRNA-1:exon:329;Parent=Msa0343010-mRNA-1
chr3_1 exon 1034785 1034874 1034785 ID=Msa0343010-mRNA-1:exon:328;Parent=Msa0343010-mRNA-1
chr3_1 exon 1034959 1035072 1034959 ID=Msa0343010-mRNA-1:exon:327;Parent=Msa0343010-mRNA-1
chr3_1 exon 1035197 1035280 1035197 ID=Msa0343010-mRNA-1:exon:326;Parent=Msa0343010-mRNA-1
chr3_1 exon 1035384 1035497 1035384 ID=Msa0343010-mRNA-1:exon:325;Parent=Msa0343010-mRNA-1
chr3_1 exon 1035836 1035881 1035836 ID=Msa0343010-mRNA-1:exon:324;Parent=Msa0343010-mRNA-1
chr3_1 exon 1035971 1036068 1035971 ID=Msa0343010-mRNA-1:exon:323;Parent=Msa0343010-mRNA-1
chr3_1 exon 1036143 1036265 1036143 ID=Msa0343010-mRNA-1:exon:322;Parent=Msa0343010-mRNA-1
chr3_1 exon 1036643 1036735 1036643 ID=Msa0343010-mRNA-1:exon:321;Parent=Msa0343010-mRNA-1
chr3_1 exon 1036852 1036908 1036852 ID=Msa0343010-mRNA-1:exon:320;Parent=Msa0343010-mRNA-1
chr3_1 exon 1037020 1037092 1037020 ID=Msa0343010-mRNA-1:exon:319;Parent=Msa0343010-mRNA-1
chr3_1 exon 1037193 1037311 1037193 ID=Msa0343010-mRNA-1:exon:318;Parent=Msa0343010-mRNA-1
chr3_1 exon 1038325 1038417 1038325 ID=Msa0343010-mRNA-1:exon:317;Parent=Msa0343010-mRNA-1
chr3_1 exon 1038570 1038893 1038570 ID=Msa0343010-mRNA-1:exon:316;Parent=Msa0343010-mRNA-1
chr3_1 exon 1038985 1039104 1038985 ID=Msa0343010-mRNA-1:exon:315;Parent=Msa0343010-mRNA-1
chr3_1 exon 1039790 1039903 1039790 ID=Msa0343010-mRNA-1:exon:314;Parent=Msa0343010-mRNA-1
chr3_1 exon 1040172 1040351 1040172 ID=Msa0343010-mRNA-1:exon:313;Parent=Msa0343010-mRNA-1
chr3_1 exon 1040758 1040872 1040758 ID=Msa0343010-mRNA-1:exon:312;Parent=Msa0343010-mRNA-1
chr3_1 exon 1041035 1041198 1041035 ID=Msa0343010-mRNA-1:exon:311;Parent=Msa0343010-mRNA-1
chr3_1 exon 1042232 1042417 1042232 ID=Msa0343010-mRNA-1:exon:310;Parent=Msa0343010-mRNA-1
chr3_1 exon 1042529 1042619 1042529 ID=Msa0343010-mRNA-1:exon:309;Parent=Msa0343010-mRNA-1
chr3_1 exon 1042912 1042976 1042912 ID=Msa0343010-mRNA-1:exon:308;Parent=Msa0343010-mRNA-1
chr3_1 exon 1043107 1043181 1043107 ID=Msa0343010-mRNA-1:exon:307;Parent=Msa0343010-mRNA-1
chr3_1 exon 1043296 1043379 1043296 ID=Msa0343010-mRNA-1:exon:306;Parent=Msa0343010-mRNA-1
chr3_1 exon 1043514 1043684 1043514 ID=Msa0343010-mRNA-1:exon:305;Parent=Msa0343010-mRNA-1
chr3_1 exon 1044429 1045662 1044429 ID=Msa0343010-mRNA-1:exon:304;Parent=Msa0343010-mRNA-1
chr3_1 five_prime_UTR 1045584 1045662 1045584 ID=Msa0343010-mRNA-1:five_prime_utr;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1044429 1045583 1044429 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1043514 1043684 1043514 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1043296 1043379 1043296 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1043107 1043181 1043107 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1042912 1042976 1042912 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1042529 1042619 1042529 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1042232 1042417 1042232 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1041035 1041198 1041035 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1040758 1040872 1040758 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1040172 1040351 1040172 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1039790 1039903 1039790 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1038985 1039104 1038985 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1038570 1038893 1038570 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1038325 1038417 1038325 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1037193 1037311 1037193 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1037020 1037092 1037020 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1036852 1036908 1036852 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1036643 1036735 1036643 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1036143 1036265 1036143 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1035971 1036068 1035971 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1035836 1035881 1035836 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1035384 1035497 1035384 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1035197 1035280 1035197 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1034959 1035072 1034959 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1034785 1034874 1034785 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1034621 1034694 1034621 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1034159 1034375 1034159 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1033917 1033970 1033917 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1033713 1033832 1033713 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1033518 1033592 1033518 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 CDS 1033166 1033312 1033166 ID=Msa0343010-mRNA-1:cds;Parent=Msa0343010-mRNA-1
chr3_1 three_prime_UTR 1032866 1033165 1032866 ID=Msa0343010-mRNA-1:three_prime_utr;Parent=Msa0343010-mRNA-1
Gene Sequence

>Msa0343010

ATGGCGGACGACGACGGTTCAAGCAGGAAGCGAAGACCAACCCGAGGCCCTGACGCCACCGCACGCAGCCAAGCCTTAGAGCTTCTCCGATCCCGCAGATCCAACGGTCCCCGATCCACCACCACACCACAAATCCGACTCGAAAACCCTATCTACGACACAATCCCTGAGGAAGAATACACCGCCTTAGTCGCTAGCCGCCGTGAACAATCCCGCTCATTCATCGTTGATGACGACGGATTTGGTTACAACGACGAAGGCGAAGAAGAGGATTGGTCCAAAGCCGGTTTCTCCCTTTCCTCAGACGAAGAATTCGATGAATCTGAGAAACCTAAACGGAAGAAAGAGAAAGACGCTTCGCAGATCAAGCGTCCTTCTGTTTCTTCTTCTGCGGCTAAATTATCAGCTGCTGCTGCTATGATGGGCGGATCAAGAGTTTCGTCGATGTTTACTTCTGCTAATTTTAAGAAAAGTAGAGATGATAAGGTTTGTGAGAGTATTGTTGATGATGTTCTTAAGGAGTTTGCGCCGGATGAGAACGATAAAATTAGTCGGAGGAAGGTTCAATCGAATTCGTCTTCTGTTGTTAATGATGCACGGATTAAGGCTAAACCTAAGCCCTCTGCTAAATCTGTATTAGGTTCTTACGCGAGTGAAAATTTTGCGAAAATCGGTAATGGTGGAAATGGTGAAATTGAATCTGGTAGGGTTAGTAAGGATAAGGATAATGGATCCAGAATAGGGTTAGGGTTAGAGGAAAAGAGTGAAGTAGAAGTGAACGAGAGTTTGGGAAATTGCGAGGGAGGAATGGTGGTGGAAGGTAATGAATGTGGTAATGGGGATTTAGTTGAAGAGAAAGTGGCGAAGGTGAAAGATGAAGAAATGGAAGTGAAACCTGTTGTGAAGAAGGAGGGTTTTACTTTGAATGCGAAAGTTAGTGAAGAAGTGGTGGATCCGAAGCTGTGTGCTACTGCTGGATGGCAGGCGGCGAGGAGTGGTGGTGGTGGAGGCGGGGAGGTAAATGTCGCTGATTCGAATAATCAACAACAGGTGGAGTTTAATTTGGATCCGGAGGGATCGTTGCCTTTTTACATACTTGATGCTTATGAGGAGTATTATGGAGCTAATATGGGTACTCTTTATTTGTTTGGGAAGGTCAAAACAGGGACTTTGTATCAGAGTTGCTGTGTTGTTGTGAAGAACATGCAGAGGTGTGTCTATGCAATTCCAAGTCATCCTTTGCATTCAACCAGTGAGATGATACAGCTTGAGAAAGATGTCCAAGAGTCTCGAATTTCTCCTGCAGATTTCCGTAAAAAGCTGCAAGATGCAGTATCTGATACAAAGAATGAGATAGCAAAACATCTGGTGGATTTGGGTGTTTCTTCCTTTAGCATGGCACCTGTTAAGAGGAAATATGCATTTGAACGAACAGACATTCCTGCAGGTGAAAATTATGTGGTGAAAATAAATTATCCGTTCAAGGATACGGCACTTCCAGTAGACCTCAAAGGAGAAAGTTTCTGTGCTCTTCTTGGAGCTCGAAACAGTGCACTTGAGTTATTTCTGATTAAAAGAAAGATTATGGGGCCTTCATGGCTACAAGTTTCAAACTTTTCTACCTGCTCAGCATCCCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTCGACTCTCCTAAAGACATCAGGAATTCTTCTTCAAAAATCACTCGAGTGACTCCCCCCGTGGTTGTCACAGCAATAAACTTGAAGACCACCATAAATGAAAAACAGAACATAAATGAAATTGTATCTGCATCTGTTGTCAGTTGCAATATGGTTAAGATTGACACTCCTATGCTGGCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGCAAACTTGATGGGAATATATTTCCAATGGGATTCAATAAGGAGGTCACGGACAGAAACATAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTCTAATGTTACAATTACACAAGATGGATAGCGACGTTCTTGTTGGACATAATATTTCTGGATTCGACCTCGATGTTCTTCTACACAGATCTCAGGCTTGTAGAGTACCAAGCAGCATGTGGTCTAAACTGGGCCGTCTCAACCGTTCTACAATGCCTAAGCTCGATAGAAGAGGCAAAACATTTGGTTTTGGAGCTGATCCTGCTATCATGTCTTGTGTTGCCGGTCGGCTTCTTTGTGATACGTATTTATGTTCTCGTGACCTATTAAAGGAGGTTAGCTATTCTTTAACTCACCTTGCAAAAACACAGCTAAACCAGTCTCGGAAGGAAGTTGCTCCAAATGAAGTTCCAAAAATGTTCCAAACTGCAAAATCCCTGATGGAGCTAATTGAATATGGGGAAACGGATGCATGGTTGTCAATGGAACTCATGTTTTATTTGAGTGTCCTTCCTCTCACACGCCAGTTGACGAATATAAGTGGCAACCTATGGGGGAAAACTCTTCAGGGTGCCCGGGCACAGAGGGTGGAGTATCTTTTGTTGCATGAATTCCATAATAAGAAATATATTGTTCCAGACAAGTTTTCTAATTACGCAAAAGAAACAAAATTGACGAAGCGCAGAGTAACTCATGGTGTCGATGATGGCAACTTTGACGATGCAGATATTAATGATGGAAACTATCATAATGATGCTTCTGAAAGTGATCATAAGAAAAACAAAAAGGCTGCTTCCTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATATGATAAATACATATTACTTCTGGACTTCAACAGTCTATACCCTTCCATCATTCAGGAATATAATATCTGCTTCACAACTGTTGAAAGATCTTCAGATGGATCTTTTCCTCGTCTGCCATCTAGTAAAACAACTGGAGTCTTGCCAGAGTTGCTGAAAAAACTGGTTATGTGGAGGCGAGACAAAAAGGCATCGATGAAAACTGCATCTGGTCTTAAACGTCAGCAACTGGACATTCAGCAGCAAGCACTGAAGCTTACTGCCAACAGTATGTATGGATGCCTGGGATTTTCCAATTCAAGATTTTATGCAAAACCGCTGGCTGAGCTCATTACCCTACAAGGAAGGGAGATACTACAAAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTGATCTATGGTGATACTGATTCAATAATGGTTTACAGTGGGCTAGATGATATTGCAAAAGCACATTCAATATCTAAGAAAGTTATTCAAGAGGTCAATAAGAAATATCGGTGCTTAGAAATTGATCTTGATGGTTTGTATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTTAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTGTTAGCGAAAGATTTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGCGAAGATGTCGTCGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCATTGGAAAAATACGTCATCACAAAGACATTGACTAAACCACCCGAAGCATATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACGCATCTGGTTGCTCTGTTGGCGATACAATCCCTTACGTAATTTGCTGTGAGCAGGGCGGTAATTCAGGCAGTGCGACCGGAATTGCTCTACGTGCCAGACATCCGGATGAATTGAAACGAGAACAGGGGACATGGCTAATTGATATTGATTACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGCACAAGCCCTGAAAGACTGGCTGATTGTTTAGGGCTTGACACATCAAAGTTTCAACATAAATCAAGTGAAGCAAGGGATGATCCTACAAGCTCACTTTTATTTGCTGGTGATGATGATGAGAGGTATCAGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCTAGTGTATTTGACTGCCCTCCTGTGTTTAAATCTATTTGTATGTTGGGAAATGAAAAGCCAACCAGCTCAGGCGCGGAGGAATCTGACTACAATTTCTGGCGCAAGCTGTGCTGTCCCAAATGCTTTGAAAATGGTGTTGGTAGAATTTCCCCTGCAATTATAGCCAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTTTAATGTATTATAGAGGTTTACTAATTTGTGACGATGAAACGTGTAAGCATACAACTCGAAGTGTCAGCTTTCGTTTGGTTGGTGATTCTGAGCGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGTACACTGAAGCGGACTTGTACAAGCAGCTCTCATATTTTTGTCATGTGTTTGATACTGTTTGTTATATAGAAAAGATGGAGGCAAAGTCTAGGATACCGATAGAGAAGGAGTTGATCAAAATCAGGCCAATAGTTGATCTTGCTGCATCAACAATACAAAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAAGCTGCAGGATCTAGTTGTTGCAATTTAA
Protein sequence

>Msa0343010

MADDDGSSRKRRPTRGPDATARSQALELLRSRRSNGPRSTTTPQIRLENPIYDTIPEEEYTALVASRREQSRSFIVDDDGFGYNDEGEEEDWSKAGFSLSSDEEFDESEKPKRKKEKDASQIKRPSVSSSAAKLSAAAAMMGGSRVSSMFTSANFKKSRDDKVCESIVDDVLKEFAPDENDKISRRKVQSNSSSVVNDARIKAKPKPSAKSVLGSYASENFAKIGNGGNGEIESGRVSKDKDNGSRIGLGLEEKSEVEVNESLGNCEGGMVVEGNECGNGDLVEEKVAKVKDEEMEVKPVVKKEGFTLNAKVSEEVVDPKLCATAGWQAARSGGGGGGEVNVADSNNQQQVEFNLDPEGSLPFYILDAYEEYYGANMGTLYLFGKVKTGTLYQSCCVVVKNMQRCVYAIPSHPLHSTSEMIQLEKDVQESRISPADFRKKLQDAVSDTKNEIAKHLVDLGVSSFSMAPVKRKYAFERTDIPAGENYVVKINYPFKDTALPVDLKGESFCALLGARNSALELFLIKRKIMGPSWLQVSNFSTCSASQRVSWCKFEVTVDSPKDIRNSSSKITRVTPPVVVTAINLKTTINEKQNINEIVSASVVSCNMVKIDTPMLASEWKRPGMLTHFTVIRKLDGNIFPMGFNKEVTDRNIKAGSNVLCVESSERALLNRLMLQLHKMDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWSKLGRLNRSTMPKLDRRGKTFGFGADPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPNEVPKMFQTAKSLMELIEYGETDAWLSMELMFYLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHEFHNKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNFDDADINDGNYHNDASESDHKKNKKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLKKLVMWRRDKKASMKTASGLKRQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKAHSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYASGCSVGDTIPYVICCEQGGNSGSATGIALRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEARDDPTSSLLFAGDDDERYQGCEPLVLSCPSCSSVFDCPPVFKSICMLGNEKPTSSGAEESDYNFWRKLCCPKCFENGVGRISPAIIANQVKRQAEKFVLMYYRGLLICDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI*