AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1125990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125990 MtrunA17_Chr7g0266631 99.206 1007 8 0 1 1007 1 1007 0.0 2058
Msa1125990 MtrunA17_Chr1g0178411 75.896 1004 241 1 4 1007 8 1010 0.0 1580
Msa1125990 MtrunA17_Chr2g0327581 48.617 1012 506 6 4 1007 44 1049 0.0 906
Msa1125990 MtrunA17_Chr1g0182151 42.240 973 552 6 3 972 48 1013 0.0 726
Msa1125990 MtrunA17_Chr3g0132921 38.287 397 206 12 9 390 9 381 5.79e-72 248
Msa1125990 MtrunA17_Chr4g0069141 40.898 401 202 10 9 398 153 529 9.47e-70 255
Msa1125990 MtrunA17_Chr4g0045381 40.404 396 191 9 9 391 193 556 4.30e-68 250
Msa1125990 MtrunA17_Chr1g0193221 36.406 434 229 9 10 430 4 403 5.96e-68 248
Msa1125990 MtrunA17_Chr5g0427481 38.000 400 212 10 10 395 18 395 2.62e-67 246
Msa1125990 MtrunA17_Chr3g0134191 38.519 405 204 10 10 388 9 394 3.26e-67 244
Msa1125990 MtrunA17_Chr1g0152231 42.442 344 165 6 56 389 46 366 1.26e-66 240
Msa1125990 MtrunA17_Chr4g0053211 37.470 411 202 13 9 386 12 400 7.60e-66 241
Msa1125990 MtrunA17_Chr3g0122121 36.946 406 210 9 10 394 99 479 1.20e-65 241
Msa1125990 MtrunA17_Chr2g0322291 38.539 397 210 7 9 394 88 461 2.84e-65 241
Msa1125990 MtrunA17_Chr1g0153061 37.284 405 209 11 10 388 9 394 2.57e-64 236
Msa1125990 MtrunA17_Chr7g0258991 38.363 391 187 11 9 386 73 422 3.54e-62 229
Msa1125990 MtrunA17_Chr8g0377731 39.143 350 181 8 56 387 91 426 5.43e-59 221
Msa1125990 MtrunA17_Chr4g0035661 37.018 389 193 11 9 386 89 436 3.35e-58 218
Msa1125990 MtrunA17_Chr1g0192481 35.052 388 214 10 9 391 58 412 4.81e-58 210
Msa1125990 MtrunA17_Chr2g0319271 37.989 358 190 11 9 353 399 737 1.06e-57 213
Msa1125990 MtrunA17_Chr2g0312631 34.305 446 227 15 9 443 384 774 1.37e-57 216
Msa1125990 MtrunA17_Chr5g0421591 32.220 509 291 14 9 513 374 832 1.45e-57 214
Msa1125990 MtrunA17_Chr5g0407791 36.524 397 205 11 1 394 886 1238 1.75e-57 216
Msa1125990 MtrunA17_Chr5g0421521 32.220 509 291 14 9 513 374 832 4.03e-57 214
Msa1125990 MtrunA17_Chr3g0142261 34.910 444 240 11 55 486 66 472 5.08e-57 215
Msa1125990 MtrunA17_Chr3g0145071 36.649 382 204 11 9 386 99 446 8.32e-57 213
Msa1125990 MtrunA17_Chr7g0271961 37.008 381 203 11 9 384 401 749 8.97e-57 213
Msa1125990 MtrunA17_Chr1g0191851 38.950 362 186 8 9 364 147 479 1.06e-56 210
Msa1125990 MtrunA17_Chr5g0411971 32.220 509 291 14 9 513 399 857 1.35e-56 213
Msa1125990 MtrunA17_Chr2g0307481 36.111 360 191 7 10 359 69 399 2.58e-56 206
Msa1125990 MtrunA17_Chr4g0049011 37.778 360 194 11 9 357 279 619 7.53e-56 205
Msa1125990 MtrunA17_Chr7g0272871 38.292 363 187 8 9 364 127 459 1.24e-55 206
Msa1125990 MtrunA17_Chr6g0483701 34.118 425 217 10 56 475 77 443 1.30e-55 209
Msa1125990 MtrunA17_Chr4g0062291 36.388 371 184 9 7 359 121 457 3.80e-55 204
Msa1125990 MtrunA17_Chr4g0042061 37.255 357 193 10 9 353 432 769 3.88e-55 206
Msa1125990 MtrunA17_Chr2g0280421 36.461 373 211 9 9 377 437 787 1.07e-54 204
Msa1125990 MtrunA17_Chr8g0372171 32.662 447 254 10 10 444 20 431 2.67e-54 205
Msa1125990 MtrunA17_Chr3g0102921 35.484 403 202 12 10 391 439 804 5.13e-54 205
Msa1125990 MtrunA17_Chr8g0369881 34.491 403 217 10 1 400 872 1230 6.49e-54 205
Msa1125990 MtrunA17_Chr4g0036001 33.178 428 251 6 10 433 25 421 1.23e-53 202
Msa1125990 MtrunA17_Chr1g0195111 36.798 356 189 9 9 356 396 723 1.25e-53 203
Msa1125990 MtrunA17_Chr5g0405181 34.367 387 211 9 10 386 21 374 2.82e-52 199
Msa1125990 MtrunA17_Chr7g0245931 33.333 405 214 8 56 428 98 478 1.01e-50 193
Msa1125990 MtrunA17_Chr7g0257301 36.728 324 170 7 54 356 434 743 3.97e-50 192
Msa1125990 MtrunA17_Chr5g0398521 32.287 446 251 10 10 437 58 470 7.18e-50 191
Msa1125990 MtrunA17_Chr5g0447041 33.886 422 207 11 9 384 434 829 8.54e-50 192
Msa1125990 MtrunA17_Chr7g0238581 32.493 357 204 7 10 358 26 353 3.10e-49 186
Msa1125990 MtrunA17_Chr3g0101021 32.853 347 203 7 53 386 105 434 4.51e-49 189
Msa1125990 MtrunA17_Chr1g0191181 35.598 368 209 11 9 373 88 430 7.24e-48 181
Msa1125990 MtrunA17_Chr5g0445211 34.195 348 197 8 54 386 107 437 1.96e-47 184
Msa1125990 MtrunA17_Chr2g0331761 35.393 356 188 8 10 356 186 508 2.36e-47 181
Msa1125990 MtrunA17_Chr4g0070001 28.222 613 323 19 10 574 144 687 2.12e-46 181
Msa1125990 MtrunA17_Chr6g0485471 32.266 406 228 10 4 393 107 481 1.14e-45 176
Msa1125990 MtrunA17_Chr4g0067421 33.241 361 200 9 10 356 206 539 7.15e-43 168
Msa1125990 MtrunA17_Chr2g0295881 28.330 473 272 12 10 443 198 642 2.52e-42 167
Msa1125990 MtrunA17_Chr8g0367581 35.876 354 180 16 9 355 146 459 3.03e-38 155
Msa1125990 MtrunA17_Chr1g0187411 31.948 385 185 16 10 360 131 472 4.10e-32 134
Msa1125990 MtrunA17_Chr8g0386891 41.538 195 99 4 201 383 4 195 2.68e-30 125
Msa1125990 MtrunA17_Chr7g0269681 40.230 174 95 3 201 368 41 211 2.41e-27 117
Msa1125990 MtrunA17_Chr8g0390981 39.634 164 86 4 9 170 515 667 4.82e-26 115
Msa1125990 MtrunA17_Chr8g0390991 42.784 194 97 5 201 384 4 193 1.33e-24 109
Msa1125990 MtrunA17_Chr6g0484501 39.487 195 103 4 201 383 34 225 4.33e-24 102
Msa1125990 MtrunA17_Chr3g0142841 27.931 290 158 8 58 332 145 398 8.64e-24 108
Msa1125990 MtrunA17_Chr6g0470541 27.090 299 185 10 56 353 51 317 1.69e-23 107
Msa1125990 MtrunA17_Chr6g0484511 35.625 160 90 4 9 166 289 437 6.60e-22 100
Msa1125990 MtrunA17_Chr8g0386901 35.849 159 88 5 9 164 483 630 1.16e-19 94.7
Msa1125990 MtrunA17_Chr7g0269691 36.478 159 85 6 9 164 400 545 4.51e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1125990 AT2G36200.1 70.618 1004 294 1 4 1007 7 1009 0.0 1468
Msa1125990 AT2G36200.2 68.502 1035 294 2 4 1007 7 1040 0.0 1450
Msa1125990 AT3G45850.2 48.842 993 494 6 4 991 50 1033 0.0 904
Msa1125990 AT3G45850.1 48.842 993 494 6 4 991 50 1033 0.0 904
Msa1125990 AT2G28620.1 47.164 1005 523 5 4 1007 45 1042 0.0 891
Msa1125990 AT2G28620.3 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa1125990 AT2G28620.2 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa1125990 AT2G37420.1 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa1125990 AT2G37420.2 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa1125990 AT5G60930.2 36.501 463 236 14 10 441 7 442 5.06e-69 252
Msa1125990 AT5G60930.3 36.501 463 236 14 10 441 7 442 5.52e-69 252
Msa1125990 AT5G60930.1 36.501 463 236 14 10 441 7 442 1.01e-68 251
Msa1125990 AT3G17360.3 40.695 403 183 9 6 386 165 533 2.64e-68 251
Msa1125990 AT3G17360.2 40.695 403 183 9 6 386 165 533 3.22e-68 251
Msa1125990 AT3G17360.1 40.695 403 183 9 6 386 165 533 3.45e-68 251
Msa1125990 AT1G59540.1 41.667 336 169 5 58 389 46 358 3.82e-68 245
Msa1125990 AT5G47820.2 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa1125990 AT5G47820.1 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa1125990 AT3G19050.1 42.162 370 176 8 9 364 193 538 3.15e-66 245
Msa1125990 AT3G10180.1 36.693 387 202 7 10 386 4 357 6.38e-66 243
Msa1125990 AT3G10180.2 36.693 387 202 7 10 386 4 357 6.51e-66 243
Msa1125990 AT3G44050.1 38.945 398 209 7 9 395 93 467 1.81e-65 241
Msa1125990 AT3G12020.4 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa1125990 AT3G12020.1 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa1125990 AT3G23670.2 40.896 357 168 10 53 385 128 465 1.12e-64 237
Msa1125990 AT2G22610.3 33.658 514 274 13 9 513 418 873 2.28e-64 237
Msa1125990 AT3G12020.3 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa1125990 AT3G12020.2 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa1125990 AT2G22610.1 33.658 514 274 13 9 513 417 872 2.58e-64 237
Msa1125990 AT2G22610.2 33.800 500 267 12 9 499 417 861 5.68e-64 236
Msa1125990 AT3G23670.1 40.896 357 168 10 53 385 128 465 7.33e-64 236
Msa1125990 AT4G14150.1 38.251 366 185 8 54 396 124 471 1.77e-62 232
Msa1125990 AT3G50240.2 36.520 408 208 12 10 388 26 411 7.10e-62 228
Msa1125990 AT3G50240.4 36.520 408 208 12 10 388 26 411 7.63e-62 229
Msa1125990 AT3G50240.1 36.520 408 208 12 10 388 26 411 8.38e-62 229
Msa1125990 AT5G06670.8 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1125990 AT5G06670.4 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1125990 AT5G06670.7 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1125990 AT5G06670.5 37.760 384 199 11 9 386 66 415 2.21e-61 224
Msa1125990 AT5G06670.2 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa1125990 AT5G06670.3 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa1125990 AT1G73860.2 36.935 398 199 12 9 383 426 794 2.53e-59 221
Msa1125990 AT1G21730.1 36.573 391 208 11 9 393 75 431 2.64e-59 220
Msa1125990 AT1G73860.1 37.186 398 198 12 9 383 509 877 7.48e-59 220
Msa1125990 AT5G06670.6 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa1125990 AT5G06670.1 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa1125990 AT3G63480.2 38.292 363 194 9 9 364 3 342 2.72e-58 208
Msa1125990 AT1G18370.1 34.829 468 252 13 10 461 32 462 2.97e-58 218
Msa1125990 AT1G18410.3 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa1125990 AT1G18410.2 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa1125990 AT1G18410.4 35.461 423 217 12 9 413 632 1016 7.72e-58 218
Msa1125990 AT2G21380.2 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa1125990 AT2G21380.1 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa1125990 AT3G63480.1 38.147 367 193 11 9 364 3 346 3.24e-57 205
Msa1125990 AT5G27000.1 35.068 442 237 16 9 433 394 802 3.51e-57 214
Msa1125990 AT4G39050.1 37.150 393 195 11 9 390 98 449 7.28e-57 214
Msa1125990 AT1G18410.5 35.000 420 210 13 9 413 479 850 1.92e-56 212
Msa1125990 AT5G27550.2 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa1125990 AT5G27550.1 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa1125990 AT1G18410.1 34.515 423 213 12 9 413 632 1008 8.79e-56 211
Msa1125990 AT4G05190.2 38.095 357 191 11 9 353 415 753 1.25e-55 207
Msa1125990 AT5G65930.1 37.190 363 191 9 1 360 884 1212 1.34e-55 211
Msa1125990 AT5G65930.3 37.190 363 191 9 1 360 891 1219 1.35e-55 211
Msa1125990 AT5G65930.2 37.190 363 191 9 1 360 885 1213 1.36e-55 211
Msa1125990 AT3G54870.1 38.484 343 178 8 56 386 150 471 2.02e-55 209
Msa1125990 AT3G54870.3 38.484 343 178 8 56 386 150 471 2.34e-55 208
Msa1125990 AT4G05190.1 38.095 357 191 11 9 353 428 766 2.45e-55 207
Msa1125990 AT3G54870.2 38.484 343 178 8 56 386 150 471 3.83e-55 209
Msa1125990 AT1G09170.3 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa1125990 AT1G09170.7 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa1125990 AT1G09170.4 38.746 351 188 10 9 356 434 760 5.72e-55 206
Msa1125990 AT4G21270.1 37.047 359 190 10 9 352 431 768 6.10e-55 206
Msa1125990 AT5G66310.2 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1125990 AT5G66310.3 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1125990 AT5G66310.1 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1125990 AT1G72250.4 35.806 391 207 10 9 383 511 873 6.30e-55 209
Msa1125990 AT5G54670.3 37.465 355 192 11 9 353 336 670 6.82e-55 204
Msa1125990 AT1G72250.3 35.806 391 207 10 9 383 512 874 6.83e-55 208
Msa1125990 AT1G09170.2 38.746 351 188 10 9 356 434 760 7.12e-55 206
Msa1125990 AT1G72250.2 35.806 391 207 10 9 383 500 862 7.30e-55 208
Msa1125990 AT1G72250.1 35.806 391 207 10 9 383 491 853 7.42e-55 208
Msa1125990 AT4G27180.1 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa1125990 AT4G27180.2 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa1125990 AT3G49650.1 33.097 423 232 11 5 407 10 401 1.10e-54 205
Msa1125990 AT1G09170.5 38.746 351 188 10 9 356 434 760 1.31e-54 207
Msa1125990 AT5G54670.1 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa1125990 AT5G54670.2 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa1125990 AT1G18550.1 38.889 306 160 4 54 357 202 482 7.41e-54 201
Msa1125990 AT3G51150.2 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1125990 AT3G51150.4 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1125990 AT3G51150.3 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1125990 AT3G51150.1 32.579 442 255 10 2 434 12 419 8.48e-54 204
Msa1125990 AT3G44730.1 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa1125990 AT3G44730.4 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa1125990 AT3G44730.2 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa1125990 AT3G44730.3 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa1125990 AT1G12430.1 31.056 483 261 11 10 467 71 506 4.76e-53 201
Msa1125990 AT1G12430.2 31.056 483 261 11 10 467 71 506 4.97e-53 201
Msa1125990 AT1G59540.2 41.328 271 144 3 123 389 7 266 9.38e-53 198
Msa1125990 AT4G24170.1 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa1125990 AT4G24170.2 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa1125990 AT2G47500.2 36.080 352 195 9 9 356 399 724 3.25e-52 199
Msa1125990 AT2G47500.1 36.182 351 194 9 10 356 400 724 4.37e-52 199
Msa1125990 AT4G38950.3 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1125990 AT4G38950.5 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1125990 AT4G38950.4 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1125990 AT4G38950.1 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1125990 AT4G38950.2 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1125990 AT2G21300.2 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1125990 AT2G21300.4 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1125990 AT2G21300.3 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1125990 AT2G21300.1 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1125990 AT2G21300.5 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1125990 AT1G55550.1 35.817 349 195 9 9 356 91 411 1.16e-50 193
Msa1125990 AT5G41310.1 35.433 381 189 12 9 375 422 759 2.53e-50 193
Msa1125990 AT3G10310.1 35.876 354 194 10 9 356 363 689 2.92e-50 193
Msa1125990 AT3G10310.2 35.876 354 194 10 9 356 363 689 2.95e-50 193
Msa1125990 AT3G43210.3 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1125990 AT3G43210.5 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1125990 AT3G43210.2 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1125990 AT3G43210.4 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1125990 AT3G43210.1 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1125990 AT1G01950.1 31.004 458 259 9 10 435 61 493 1.48e-49 190
Msa1125990 AT1G01950.2 31.004 458 259 9 10 435 61 493 1.58e-49 190
Msa1125990 AT1G63640.2 35.544 377 205 10 9 375 472 820 1.83e-49 191
Msa1125990 AT1G01950.3 31.004 458 259 9 10 435 61 493 1.93e-49 190
Msa1125990 AT1G63640.1 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa1125990 AT1G63640.4 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa1125990 AT1G63640.3 35.185 378 212 10 9 375 472 827 3.01e-49 190
Msa1125990 AT1G63640.5 35.185 378 212 10 9 375 462 817 4.01e-49 190
Msa1125990 AT5G27950.1 33.412 425 234 12 9 413 79 474 3.66e-48 182
Msa1125990 AT3G50240.3 38.006 321 157 9 96 388 3 309 9.25e-47 182
Msa1125990 AT1G09170.6 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa1125990 AT1G09170.8 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa1125990 AT3G16060.1 34.270 356 192 8 10 356 170 492 1.12e-46 179
Msa1125990 AT5G02370.1 31.421 366 208 9 9 366 20 350 1.58e-45 173
Msa1125990 AT3G20150.2 32.184 348 206 8 53 386 133 464 9.81e-45 176
Msa1125990 AT3G20150.1 32.184 348 206 8 53 386 133 464 1.30e-44 176
Msa1125990 AT1G09170.1 36.103 349 164 11 9 356 434 724 3.52e-44 174
Msa1125990 AT3G16630.2 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa1125990 AT3G16630.1 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa1125990 AT1G01950.4 31.117 376 203 8 92 435 1 352 1.52e-37 152
Msa1125990 AT5G65460.2 30.303 396 225 10 9 391 138 495 9.87e-37 150
Msa1125990 AT5G65460.6 30.303 396 225 10 9 391 138 495 1.20e-36 150
Msa1125990 AT5G65460.1 30.303 396 225 10 9 391 138 495 1.80e-36 150
Msa1125990 AT5G65460.4 30.303 396 225 10 9 391 138 495 2.05e-36 150
Msa1125990 AT5G65460.3 30.303 396 232 11 9 391 138 502 5.69e-35 145
Msa1125990 AT5G10470.2 31.161 353 198 11 9 355 142 455 2.58e-33 140
Msa1125990 AT5G10470.1 31.161 353 198 11 9 355 142 455 2.69e-33 140
Msa1125990 AT4G14330.1 30.986 355 201 12 10 356 49 367 5.13e-32 135
Msa1125990 AT3G51150.5 34.661 251 161 2 187 434 16 266 1.98e-31 133
Msa1125990 AT5G27950.2 32.476 311 181 8 123 413 7 308 2.68e-31 129
Msa1125990 AT5G42490.2 30.363 303 176 7 1 299 1 272 2.01e-29 127
Msa1125990 AT5G42490.1 30.363 303 176 7 1 299 1 272 2.11e-29 127
Msa1125990 AT5G65460.5 30.502 259 149 6 143 391 12 249 4.05e-18 90.5
Msa1125990 AT5G23910.2 25.490 255 155 7 76 330 79 298 3.16e-16 84.0
Msa1125990 AT5G23910.1 25.490 255 155 7 76 330 75 294 3.17e-16 84.0
Msa1125990 AT1G20060.10 26.897 290 169 6 58 333 165 425 1.10e-14 79.3
Msa1125990 AT1G20060.9 26.897 290 169 6 58 333 165 425 1.16e-14 79.3
Msa1125990 AT1G20060.5 26.897 290 169 6 58 333 165 425 1.22e-14 79.3
Msa1125990 AT1G20060.4 26.897 290 169 6 58 333 165 425 1.25e-14 79.3
Msa1125990 AT1G20060.8 26.897 290 169 6 58 333 165 425 1.31e-14 79.3
Msa1125990 AT1G20060.3 26.897 290 169 6 58 333 165 425 1.32e-14 79.3
Msa1125990 AT1G20060.2 26.897 290 169 6 58 333 165 425 1.33e-14 79.3
Msa1125990 AT1G20060.6 26.897 290 169 6 58 333 165 425 1.34e-14 79.3
Msa1125990 AT1G20060.7 26.897 290 169 6 58 333 165 425 1.35e-14 79.3

Find 218 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCACCCAATTGAATTAA+TGG 0.200750 7_3:+77465796 Msa1125990:CDS
GCTTCATTATTTGCGAAAAT+TGG 0.208423 7_3:+77462943 Msa1125990:CDS
CGAAATCTGGTTAATATTAA+AGG 0.223932 7_3:+77465907 Msa1125990:three_prime_UTR
AGTACTGCTCATTCGGCTTT+TGG 0.230539 7_3:+77464686 Msa1125990:CDS
TTTCTTTCTCTTTCTCTTCT+GGG 0.237285 7_3:-77459810 None:intergenic
CTCGGAATCACTCCTGCTTC+TGG 0.261269 7_3:-77460611 None:intergenic
CAATGCTCTCTGTTTGCATT+TGG 0.270593 7_3:-77464063 None:intergenic
GGAAATTTCAAAGGTTAGTT+TGG 0.272007 7_3:+77460745 Msa1125990:CDS
TCCTGATAGTATCTTTCCTT+TGG 0.282763 7_3:-77462036 None:intergenic
ACTCAAAGCTTGTTGATCTT+AGG 0.286567 7_3:+77464403 Msa1125990:CDS
ACCACCACCATTAATTCAAT+TGG 0.289536 7_3:-77465803 None:intergenic
AAGCCCTTCTTGAGGAATTC+CGG 0.291935 7_3:+77465706 Msa1125990:CDS
TTAATTAGTTCTTCACCTTC+AGG 0.292142 7_3:-77461067 None:intergenic
AATAAAAGTTTGCTTACATT+AGG 0.296521 7_3:+77461296 Msa1125990:CDS
CTGAATTTGGTGGATCTTGC+GGG 0.297261 7_3:+77461100 Msa1125990:CDS
TGCAAAGAGAACCAACCTTC+TGG 0.303724 7_3:-77463123 None:intergenic
CTTATCATGAATTCCCAAAA+AGG 0.315109 7_3:-77463212 None:intergenic
TAAGTGTGGTAAACTGAATT+TGG 0.316113 7_3:+77461087 Msa1125990:CDS
TGATTTAGAGAAAGCTCTTC+AGG 0.326196 7_3:+77462915 Msa1125990:CDS
TGAATGACCGTGGGAGGATA+TGG 0.333613 7_3:-77463564 None:intergenic
AAAATGTCTGGTAAAGAAAA+AGG 0.333790 7_3:+77459886 Msa1125990:exon
CATGAGGCTGTAAATGAGTT+AGG 0.341917 7_3:+77464725 Msa1125990:CDS
AGTTTCTGCAGTGCGTCTTT+TGG 0.342051 7_3:-77460894 None:intergenic
TCTTAGCGTGGAACAAATAA+AGG 0.345084 7_3:+77463958 Msa1125990:CDS
CTCAAAGCTTGTTGATCTTA+GGG 0.346483 7_3:+77464404 Msa1125990:CDS
ATCAAGTTTGTTGCTTAAAT+CGG 0.348509 7_3:-77462529 None:intergenic
TTCAAGTTCTACTTCGTTGC+AGG 0.350179 7_3:+77459917 Msa1125990:CDS
ATAAAAGTTTGCTTACATTA+GGG 0.353144 7_3:+77461297 Msa1125990:CDS
ACTCTTATCAAGGATCTTTA+CGG 0.356503 7_3:+77461846 Msa1125990:CDS
CTTTAGTTCTTCCTCTCTAC+TGG 0.368324 7_3:-77462676 None:intergenic
TTGCGACAGAGTCACTTATC+AGG 0.371706 7_3:+77464762 Msa1125990:CDS
AGATCTACGACTCAACGTTT+TGG 0.373567 7_3:-77459705 None:intergenic
ACCTCAGGCTCACATCTTAC+TGG 0.376235 7_3:-77465639 None:intergenic
TCCAAAGGAAAGATACTATC+AGG 0.382428 7_3:+77462035 Msa1125990:CDS
ATATATCTCGTTCCGGCGCT+AGG 0.385461 7_3:+77461131 Msa1125990:CDS
AGCCCTTCTTGAGGAATTCC+GGG 0.389134 7_3:+77465707 Msa1125990:CDS
GCTGTTTCTCAGAATATTGC+CGG 0.394967 7_3:+77460125 Msa1125990:CDS
AGTTTGAAGAATGCGAAATC+TGG 0.395758 7_3:+77465894 Msa1125990:three_prime_UTR
AACCCTATCGATGTGTTTGC+CGG 0.398973 7_3:-77460144 None:intergenic
GAGTCTATTGTACCCTTACT+TGG 0.406741 7_3:-77465663 None:intergenic
CGTTTACTTCGTGATTCACT+TGG 0.406888 7_3:+77461479 Msa1125990:CDS
TATTGTAGAGTGGGCCGAAT+GGG 0.407632 7_3:+77460579 Msa1125990:intron
TTCACATGCCCTGTGTTCAA+TGG 0.410810 7_3:-77465486 None:intergenic
TAGTGTTAGTACTGCTCATT+CGG 0.418070 7_3:+77464679 Msa1125990:intron
GTAAGGGAATGGTAGCGTTC+GGG 0.425898 7_3:-77459767 None:intergenic
CGTAACTCGTCGTCACTAAA+CGG 0.426279 7_3:-77460053 None:intergenic
TCCTCAAGAAGGGCTTCAAT+TGG 0.434669 7_3:-77465699 None:intergenic
CTTCTGTGGCCGCAGTTGTA+AGG 0.441833 7_3:-77463702 None:intergenic
TAATTAGTTCTTCACCTTCA+GGG 0.442192 7_3:-77461066 None:intergenic
ATATTACAACCAATGCAAAA+AGG 0.444775 7_3:+77464481 Msa1125990:CDS
CAGGGGTTGCTTCTTTGATG+TGG 0.445907 7_3:-77461048 None:intergenic
AGTTCTTGTGAGAGGGTTGG+AGG 0.446987 7_3:+77460817 Msa1125990:CDS
CCTTTACCATCCTCCATAAG+AGG 0.448559 7_3:-77460791 None:intergenic
ACAACTGCGGCCACAGAAGC+TGG 0.453498 7_3:+77463706 Msa1125990:CDS
TGAGCCTGAGGTTCCAAGTA+AGG 0.455105 7_3:+77465650 Msa1125990:CDS
GATTACTGATTTGCTTGCTC+CGG 0.455133 7_3:+77460721 Msa1125990:CDS
GTGAAAATGAGAGCGGGGTA+AGG 0.456226 7_3:-77459784 None:intergenic
CTTGTGTCTAAATCCCATCT+TGG 0.459939 7_3:+77465957 Msa1125990:three_prime_UTR
ACTTGCTCGGTTGTCTGTTG+TGG 0.461278 7_3:+77465830 Msa1125990:three_prime_UTR
AGGATGTAATGTGATATCTA+AGG 0.461712 7_3:+77465927 Msa1125990:three_prime_UTR
GCAAAGAGAACCAACCTTCT+GGG 0.463613 7_3:-77463122 None:intergenic
GGTAAGGGAATGGTAGCGTT+CGG 0.465385 7_3:-77459768 None:intergenic
GCTTATGGTCAAACCGGTAC+CGG 0.465857 7_3:+77460384 Msa1125990:CDS
GTTCTTTGCCACATCTTCCT+CGG 0.465992 7_3:-77465067 None:intergenic
ATGAGGCTGTAAATGAGTTA+GGG 0.467123 7_3:+77464726 Msa1125990:CDS
AATTTCAAAGGTTAGTTTGG+AGG 0.468206 7_3:+77460748 Msa1125990:CDS
TCAGGAAGAGATTGAGAAGA+AGG 0.468367 7_3:+77462053 Msa1125990:CDS
ACCTTGGTCATATTCCATAC+AGG 0.468931 7_3:+77461345 Msa1125990:CDS
AAATGTTGTGCGTTTGCATA+AGG 0.469562 7_3:+77463505 Msa1125990:CDS
TGGAGTTCTTGTGAGAGGGT+TGG 0.470076 7_3:+77460814 Msa1125990:CDS
CCACCACCATTAATTCAATT+GGG 0.472536 7_3:-77465802 None:intergenic
AGTTCTCTTTGTTGTGCAGA+AGG 0.472884 7_3:-77460297 None:intergenic
TTGTGTCTAAATCCCATCTT+GGG 0.473561 7_3:+77465958 Msa1125990:three_prime_UTR
CCAAACTAATCGAAAATGTC+TGG 0.475096 7_3:+77459874 Msa1125990:exon
ATTTATACTCTTCTCGAAAG+AGG 0.476525 7_3:+77460866 Msa1125990:CDS
GTTTACTTCGTGATTCACTT+GGG 0.477940 7_3:+77461480 Msa1125990:CDS
CACATTGGATTATGCACATA+GGG 0.482800 7_3:+77461571 Msa1125990:CDS
AGCTATATTTCATCCCAAGA+TGG 0.485104 7_3:-77465971 None:intergenic
GAAATTGAACGCCTTAAGTC+AGG 0.486114 7_3:+77461870 Msa1125990:CDS
TCAGAAAATATATCTCGTTC+CGG 0.490535 7_3:+77461124 Msa1125990:CDS
GGGGAGTTGCCTCCAGAAGC+AGG 0.490766 7_3:+77460599 Msa1125990:CDS
AAAGCAACTCACCTGACTTA+AGG 0.490808 7_3:-77461881 None:intergenic
GGCTGATCAGATTGAGCAGA+TGG 0.491400 7_3:+77462323 Msa1125990:CDS
AAACACATGCTTGATGAGCT+AGG 0.492131 7_3:-77462885 None:intergenic
CTAACCTTTGAAATTTCCTC+CGG 0.492328 7_3:-77460740 None:intergenic
TGAATCTTCTTCTGATGTAA+AGG 0.493394 7_3:+77465743 Msa1125990:CDS
TCTGGAGGCAACTCCCCATT+CGG 0.494521 7_3:-77460593 None:intergenic
GATGAAATCAACTCTTATCA+AGG 0.496778 7_3:+77461836 Msa1125990:CDS
ACTGAATTTGGTGGATCTTG+CGG 0.498055 7_3:+77461099 Msa1125990:CDS
TCGATATACCGTCAATGAAA+AGG 0.498711 7_3:+77462704 Msa1125990:CDS
TCTAAAACTTCATTTACTAT+CGG 0.500281 7_3:-77460339 None:intergenic
TACTGATTTGCTTGCTCCGG+AGG 0.500556 7_3:+77460724 Msa1125990:CDS
TCTTCTAAGCAATGAACAGC+GGG 0.501914 7_3:-77461539 None:intergenic
TTCACGTTCTTCTGCAGATG+TGG 0.503980 7_3:-77465378 None:intergenic
CACAATTGAATCTTATCAGA+AGG 0.504661 7_3:+77462350 Msa1125990:CDS
CGTTGAGTCGTAGATCTAAA+GGG 0.504791 7_3:+77459711 Msa1125990:five_prime_UTR
TATATCTCGTTCCGGCGCTA+GGG 0.505296 7_3:+77461132 Msa1125990:CDS
GCTATATTTCATCCCAAGAT+GGG 0.508639 7_3:-77465970 None:intergenic
TAGGGTCGTGCTAGAGAAGC+TGG 0.509761 7_3:+77461266 Msa1125990:intron
CCCAATTGAATTAATGGTGG+TGG 0.511093 7_3:+77465802 Msa1125990:exon
TTGCCGGCAAACACATCGAT+AGG 0.515439 7_3:+77460141 Msa1125990:CDS
ACGTTGAGTCGTAGATCTAA+AGG 0.515890 7_3:+77459710 Msa1125990:five_prime_UTR
CCTCTTATGGAGGATGGTAA+AGG 0.516458 7_3:+77460791 Msa1125990:CDS
AATTAGTTCTTCACCTTCAG+GGG 0.516668 7_3:-77461065 None:intergenic
GTACCCTTACTTGGAACCTC+AGG 0.521316 7_3:-77465654 None:intergenic
TCTTGAAGAGTTTGTAGCAC+GGG 0.523819 7_3:+77464036 Msa1125990:CDS
TGAAAATGAGAGCGGGGTAA+GGG 0.524760 7_3:-77459783 None:intergenic
ATGAGAGCGGGGTAAGGGAA+TGG 0.526307 7_3:-77459778 None:intergenic
AGAAGAAACTTTGAGCACAT+TGG 0.527349 7_3:+77461556 Msa1125990:CDS
TCAAGCGGAACTTGCCCAGA+AGG 0.527458 7_3:+77463108 Msa1125990:CDS
TTTACTTCGTGATTCACTTG+GGG 0.527789 7_3:+77461481 Msa1125990:CDS
GCGGAACTTGCCCAGAAGGT+TGG 0.529635 7_3:+77463112 Msa1125990:CDS
TTTCCCGGAATTCCTCAAGA+AGG 0.529661 7_3:-77465710 None:intergenic
AAAATCTGCTTAACAGCCCT+CGG 0.532341 7_3:-77460629 None:intergenic
AGCAATGAGTTTCTCCGACT+CGG 0.536022 7_3:-77464209 None:intergenic
ATATCTGAACAGAGAAAAGC+AGG 0.537704 7_3:+77462735 Msa1125990:CDS
AAAGGAGATTTCTGAGCGAT+CGG 0.540594 7_3:+77463976 Msa1125990:CDS
ATCTCGTTCCGGCGCTAGGG+AGG 0.540871 7_3:+77461135 Msa1125990:CDS
CATTAATTCAATTGGGTGAG+AGG 0.541602 7_3:-77465795 None:intergenic
TTCCCGGAATTCCTCAAGAA+GGG 0.541778 7_3:-77465709 None:intergenic
GGCAAGCTCAGATGCATCGT+TGG 0.542825 7_3:+77463526 Msa1125990:CDS
TTTATACTCTTCTCGAAAGA+GGG 0.544349 7_3:+77460867 Msa1125990:CDS
TTCTGCACGAGCAGCAGCCG+AGG 0.544773 7_3:+77465050 Msa1125990:CDS
GCCAATTGAAGCCCTTCTTG+AGG 0.545654 7_3:+77465698 Msa1125990:CDS
GAAATGATTAACCTTGTCGA+AGG 0.549603 7_3:-77460171 None:intergenic
CTTGTTGATCTTAGGGAGAG+TGG 0.551246 7_3:+77464411 Msa1125990:CDS
AAAGGTGGAGTTCTTGTGAG+AGG 0.552341 7_3:+77460809 Msa1125990:CDS
TTCAATTGAATGACCGTGGG+AGG 0.555275 7_3:-77463570 None:intergenic
CTTACTGGTGTTGTACCACT+AGG 0.557477 7_3:-77465624 None:intergenic
AATACACCGCCCCTTCCCCA+TGG 0.558653 7_3:-77466025 None:intergenic
AAGGTGGAGTTCTTGTGAGA+GGG 0.562194 7_3:+77460810 Msa1125990:CDS
ATACACCGCCCCTTCCCCAT+GGG 0.562424 7_3:-77466024 None:intergenic
GTGTGGTAAACTGAATTTGG+TGG 0.562701 7_3:+77461090 Msa1125990:CDS
CTTTACTTAACAAACAATCC+AGG 0.562813 7_3:+77460915 Msa1125990:CDS
TGCTCCGGAGGAAATTTCAA+AGG 0.564496 7_3:+77460736 Msa1125990:CDS
GAGACACATACACCGCCCTC+AGG 0.567781 7_3:-77463466 None:intergenic
ATAACACATACCTTTGCTGC+AGG 0.568335 7_3:-77464593 None:intergenic
GGAATCACTCCTGCTTCTGG+AGG 0.569628 7_3:-77460608 None:intergenic
AAATATTGAGCCAGCTTCTG+TGG 0.569706 7_3:-77463716 None:intergenic
ATCAAAGAAGCAACCCCTGA+AGG 0.571587 7_3:+77461052 Msa1125990:CDS
ACATCTCAAGTGTATTTGCA+TGG 0.571954 7_3:-77465433 None:intergenic
TGCAGCAAAGCATTGCCGTA+TGG 0.572013 7_3:+77464563 Msa1125990:CDS
AACACATGCTTGATGAGCTA+GGG 0.572321 7_3:-77462884 None:intergenic
AAGAAGGGCTTCAATTGGCA+AGG 0.572739 7_3:-77465694 None:intergenic
CAGCTGCCTCTTATGGAGGA+TGG 0.572792 7_3:+77460785 Msa1125990:CDS
TTCTTCAATTGAATGACCGT+GGG 0.577395 7_3:-77463573 None:intergenic
CCTCTGCAACATGCTGCACA+TGG 0.578113 7_3:-77465023 None:intergenic
AAGCTCAGATGCATCGTTGG+AGG 0.578206 7_3:+77463529 Msa1125990:CDS
AATGCCCTTGTGGAGCACCT+TGG 0.582656 7_3:+77461329 Msa1125990:CDS
AGCAGCAGCCGAGGAAGATG+TGG 0.583212 7_3:+77465059 Msa1125990:CDS
TGGAGGTACTCCTGCAGCAA+AGG 0.583971 7_3:+77464583 Msa1125990:CDS
ACGAAGCAATGCGCCGCAAG+TGG 0.584260 7_3:+77460073 Msa1125990:CDS
CTTCTTCAATTGAATGACCG+TGG 0.584778 7_3:-77463574 None:intergenic
TTACTTCGTGATTCACTTGG+GGG 0.585368 7_3:+77461482 Msa1125990:CDS
ATGTTTCAACCAGCAACTTG+AGG 0.586402 7_3:+77462467 Msa1125990:intron
TGAGGCTGTAAATGAGTTAG+GGG 0.588970 7_3:+77464727 Msa1125990:CDS
TGCCGGCAAACACATCGATA+GGG 0.591445 7_3:+77460142 Msa1125990:CDS
ATGTTTAGAGAGAATCACTC+AGG 0.592534 7_3:+77465452 Msa1125990:CDS
GGGTGTGTGAAAATGAGAGC+GGG 0.594707 7_3:-77459790 None:intergenic
GGTGAAGAACTAATTAAGTG+TGG 0.594781 7_3:+77461073 Msa1125990:CDS
AAGAACAAGTCATTCTTCGA+TGG 0.597882 7_3:+77464438 Msa1125990:CDS
ATGTATTACCTCCCTAGCGC+CGG 0.599821 7_3:-77461143 None:intergenic
GAACAGAACGGACATCTACA+AGG 0.603630 7_3:+77463169 Msa1125990:CDS
CAAGGTGCTTGCCAGTAGAG+AGG 0.604034 7_3:+77462665 Msa1125990:CDS
ATTGTAGAGTGGGCCGAATG+GGG 0.605112 7_3:+77460580 Msa1125990:intron
AAGCTGCTTCCATTGAACAC+AGG 0.606159 7_3:+77465477 Msa1125990:CDS
GAACGGACATCTACAAGGTG+TGG 0.606575 7_3:+77463174 Msa1125990:CDS
CTTATGGAGGATGGTAAAGG+TGG 0.606629 7_3:+77460794 Msa1125990:CDS
TTATTGTAGAGTGGGCCGAA+TGG 0.607043 7_3:+77460578 Msa1125990:intron
GCACATTGGATTATGCACAT+AGG 0.608499 7_3:+77461570 Msa1125990:CDS
TGTCGCTATAATGCACGTCT+TGG 0.609364 7_3:-77461510 None:intergenic
AGCTGCTTCCATTGAACACA+GGG 0.609438 7_3:+77465478 Msa1125990:CDS
AGGAGAATGCAAAAGATCCA+AGG 0.609671 7_3:+77460425 Msa1125990:CDS
TCGTTACAAGTCACCACTTG+CGG 0.611168 7_3:-77460086 None:intergenic
TTCTAAGCAATGAACAGCGG+GGG 0.612866 7_3:-77461537 None:intergenic
GGTGGTGGTATCAACTTGCT+CGG 0.614479 7_3:+77465817 Msa1125990:three_prime_UTR
GCTGATCAGATTGAGCAGAT+GGG 0.615061 7_3:+77462324 Msa1125990:CDS
AAAGCAGCTGCCTCTTATGG+AGG 0.615652 7_3:+77460781 Msa1125990:CDS
GCGAGTGATTAATGCCCTTG+TGG 0.616893 7_3:+77461319 Msa1125990:CDS
AAAGAGATTCAATCTTAGCG+TGG 0.620048 7_3:+77463946 Msa1125990:intron
GAGCCTGAGGTTCCAAGTAA+GGG 0.621669 7_3:+77465651 Msa1125990:CDS
GCTGCAGGAGTACCTCCATA+CGG 0.623230 7_3:-77464578 None:intergenic
CGATGGACATGTGTCATCAG+TGG 0.625704 7_3:+77464455 Msa1125990:CDS
CAGAAGCAGGAGTGATTCCG+AGG 0.626891 7_3:+77460612 Msa1125990:CDS
AAATGGGGTCTATATTCCAA+AGG 0.630492 7_3:+77462020 Msa1125990:CDS
AGCAAAGCATTGCCGTATGG+AGG 0.630722 7_3:+77464566 Msa1125990:CDS
ATCTTGAAGAGTTTGTAGCA+CGG 0.633283 7_3:+77464035 Msa1125990:CDS
CCATGTGCAGCATGTTGCAG+AGG 0.638969 7_3:+77465023 Msa1125990:CDS
TATGACCAAGGTGCTCCACA+AGG 0.639953 7_3:-77461334 None:intergenic
TCATCTGCCATATCCTCCCA+CGG 0.644594 7_3:+77463557 Msa1125990:CDS
AGAGAAAATGAAAGACCTGA+GGG 0.646065 7_3:+77463451 Msa1125990:CDS
GGTGTATGTGTCTCATATTG+AGG 0.648593 7_3:+77463475 Msa1125990:CDS
GGAGAACGTGGAATAAGAGA+CGG 0.650519 7_3:-77465774 None:intergenic
TGGCAAAATTGTGAAGACAA+AGG 0.651471 7_3:+77459647 Msa1125990:five_prime_UTR
AAACTTGAACAAGACTAGCA+AGG 0.654128 7_3:+77462647 Msa1125990:CDS
AGCTGTCTTTCAACACAACA+TGG 0.654858 7_3:+77463751 Msa1125990:CDS
AGAAGCAGGAGTGATTCCGA+GGG 0.655095 7_3:+77460613 Msa1125990:CDS
ACCTGTATGGAATATGACCA+AGG 0.656221 7_3:-77461346 None:intergenic
AATTGGGTGAGAGGAGAACG+TGG 0.659642 7_3:-77465786 None:intergenic
TTCTTCTAAGCAATGAACAG+CGG 0.660743 7_3:-77461540 None:intergenic
AAGAGAAAATGAAAGACCTG+AGG 0.661629 7_3:+77463450 Msa1125990:CDS
ACCAGTAAGATGTGAGCCTG+AGG 0.663461 7_3:+77465638 Msa1125990:CDS
GGAGCAATCAAAATCCGAGT+CGG 0.665209 7_3:+77464195 Msa1125990:intron
TACACCGCCCCTTCCCCATG+GGG 0.675110 7_3:-77466023 None:intergenic
GAATCAGTTCCTTACAACTG+CGG 0.678491 7_3:+77463693 Msa1125990:intron
TCACCCAATTGAATTAATGG+TGG 0.679217 7_3:+77465799 Msa1125990:exon
ACATCGTTGTCTGAACAGAA+CGG 0.680443 7_3:+77463157 Msa1125990:CDS
TGTTTAGAGAGAATCACTCA+GGG 0.684514 7_3:+77465453 Msa1125990:CDS
ATGACCAAGGTGCTCCACAA+GGG 0.696272 7_3:-77461333 None:intergenic
CTTCTAAGCAATGAACAGCG+GGG 0.703813 7_3:-77461538 None:intergenic
ACACCGCCCCTTCCCCATGG+GGG 0.704634 7_3:-77466022 None:intergenic
TTGCAGGACTATGAGCCTAG+TGG 0.711227 7_3:+77465609 Msa1125990:intron
TGGGTGTGTGAAAATGAGAG+CGG 0.716302 7_3:-77459791 None:intergenic
ACAAGTGAAGAGGACACATG+AGG 0.719990 7_3:+77464709 Msa1125990:CDS
GAAAATGAAAGACCTGAGGG+CGG 0.741209 7_3:+77463454 Msa1125990:CDS
CAACAAACTTGATACCACTG+AGG 0.766437 7_3:+77462539 Msa1125990:CDS
GGTGTGTGAAAATGAGAGCG+GGG 0.781251 7_3:-77459789 None:intergenic
ACAATGATATCAGACCTCAG+TGG 0.807291 7_3:-77462553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTAATGTCT+TGG + chr7_3:77462195-77462214 Msa1125990:intron 10.0%
!!! ATACATTATTATATTTTTCT+TGG + chr7_3:77464304-77464323 Msa1125990:intron 10.0%
!!! TTGGATTTTTTATTATCTAA+CGG - chr7_3:77459689-77459708 None:intergenic 15.0%
!!! TTTAATTTGTTGCATTTTTT+TGG + chr7_3:77460261-77460280 Msa1125990:intron 15.0%
!! ATGAATATACATTGATATTT+AGG + chr7_3:77461441-77461460 Msa1125990:intron 15.0%
!! TGAATATACATTGATATTTA+GGG + chr7_3:77461442-77461461 Msa1125990:intron 15.0%
!! ATGAAAATGAATCTTATAAA+AGG - chr7_3:77461755-77461774 None:intergenic 15.0%
!!! TTTTATATTCTAATTGGTTT+AGG + chr7_3:77461800-77461819 Msa1125990:intron 15.0%
!!! TTTGTTTTCTTAAAAAACTA+TGG + chr7_3:77462373-77462392 Msa1125990:intron 15.0%
!! ATTATATTTATTTATGTCTC+CGG + chr7_3:77463025-77463044 Msa1125990:intron 15.0%
!! TAATAACTTAAGAAATAGAA+AGG - chr7_3:77465309-77465328 None:intergenic 15.0%
!! TAATATCTATATTTGATCAT+TGG - chr7_3:77465550-77465569 None:intergenic 15.0%
!! AAAAAATGAACGAAATGAAA+GGG - chr7_3:77459952-77459971 None:intergenic 20.0%
!!! AACGTTTTTTAGAAGTTATT+AGG + chr7_3:77460196-77460215 Msa1125990:intron 20.0%
!!! ACGTTTTTTAGAAGTTATTA+GGG + chr7_3:77460197-77460216 Msa1125990:intron 20.0%
!! GTTATTAGGGAATTAATTAA+TGG + chr7_3:77460210-77460229 Msa1125990:intron 20.0%
!!! TCTAAAACTTCATTTACTAT+CGG - chr7_3:77460342-77460361 None:intergenic 20.0%
!!! ATAGTAAATGAAGTTTTAGA+AGG + chr7_3:77460342-77460361 Msa1125990:CDS 20.0%
!!! AATTGTACTATTTTTGCTTA+TGG + chr7_3:77460369-77460388 Msa1125990:CDS 20.0%
!!! TAATGATTTTTATTGTAGAG+TGG + chr7_3:77460569-77460588 Msa1125990:intron 20.0%
!!! AATGATTTTTATTGTAGAGT+GGG + chr7_3:77460570-77460589 Msa1125990:intron 20.0%
!!! GTTTTTAGAATTGTATAATG+AGG + chr7_3:77460697-77460716 Msa1125990:CDS 20.0%
!!! AATAAAAGTTTGCTTACATT+AGG + chr7_3:77461296-77461315 Msa1125990:CDS 20.0%
!!! ATAAAAGTTTGCTTACATTA+GGG + chr7_3:77461297-77461316 Msa1125990:CDS 20.0%
!! TCATTAATGTATTGGATAAA+AGG - chr7_3:77461711-77461730 None:intergenic 20.0%
!! TACATGTATCATTAATGTAT+TGG - chr7_3:77461719-77461738 None:intergenic 20.0%
!! ATACATTAATGATACATGTA+TGG + chr7_3:77461719-77461738 Msa1125990:intron 20.0%
!!! TTTATTTTCTCTGTTTTGAT+TGG + chr7_3:77462973-77462992 Msa1125990:intron 20.0%
!! CAATCAAAGAATGAATTAAA+GGG - chr7_3:77463872-77463891 None:intergenic 20.0%
!! ACAATCAAAGAATGAATTAA+AGG - chr7_3:77463873-77463892 None:intergenic 20.0%
!!! TTTTGAGATCTACTTTTTTT+TGG + chr7_3:77464341-77464360 Msa1125990:intron 20.0%
!!! TTTTTGTTGTATAATGTGTT+CGG + chr7_3:77464817-77464836 Msa1125990:intron 20.0%
!! ATAGAATAATGTCAGATTAT+AGG - chr7_3:77465147-77465166 None:intergenic 20.0%
!!! ATTCATATGAATTATTTTCC+CGG - chr7_3:77465728-77465747 None:intergenic 20.0%
!!! GCTCAAATAATAGTTATTTT+TGG + chr7_3:77465991-77466010 Msa1125990:three_prime_UTR 20.0%
!!! TTTTATCTATCTTATTCCAA+TGG + chr7_3:77466047-77466066 Msa1125990:three_prime_UTR 20.0%
! AAAATGTCTGGTAAAGAAAA+AGG + chr7_3:77459886-77459905 Msa1125990:exon 25.0%
! GAAAAAATGAACGAAATGAA+AGG - chr7_3:77459953-77459972 None:intergenic 25.0%
! GAATTAATTAATGGTAGACT+GGG + chr7_3:77460219-77460238 Msa1125990:intron 25.0%
!!! TTTGTTGCATTTTTTTGGTT+AGG + chr7_3:77460266-77460285 Msa1125990:intron 25.0%
!!! CATTTTTTTGGTTAGGTTTT+TGG + chr7_3:77460273-77460292 Msa1125990:intron 25.0%
! AGTAATAATCTACACATACA+TGG + chr7_3:77460522-77460541 Msa1125990:intron 25.0%
!! TGAGCTTTGTAATATTTGTT+AGG + chr7_3:77461247-77461266 Msa1125990:intron 25.0%
!! GAGCTTTGTAATATTTGTTA+GGG + chr7_3:77461248-77461267 Msa1125990:intron 25.0%
! TTCAAAAGTAAAAACCTGTA+TGG - chr7_3:77461362-77461381 None:intergenic 25.0%
! ATTTCAAGAAAAATACTGAC+AGG - chr7_3:77461657-77461676 None:intergenic 25.0%
!!! ACCTGCTTTTATATTCTAAT+TGG + chr7_3:77461794-77461813 Msa1125990:intron 25.0%
! ACCAATTAGAATATAAAAGC+AGG - chr7_3:77461798-77461817 None:intergenic 25.0%
!!! GAGTTGATTTCATCATTTTT+TGG - chr7_3:77461830-77461849 None:intergenic 25.0%
! AAACGCATACATCAATATAA+GGG - chr7_3:77462287-77462306 None:intergenic 25.0%
!!! ATCAAGTTTGTTGCTTAAAT+CGG - chr7_3:77462532-77462551 None:intergenic 25.0%
! ATGTAATGACAATAAAGAGA+CGG - chr7_3:77462584-77462603 None:intergenic 25.0%
! ATTCGACATAACAACTTTAA+GGG + chr7_3:77462602-77462621 Msa1125990:intron 25.0%
! TTCTCTACCTATATAATTAC+CGG - chr7_3:77463047-77463066 None:intergenic 25.0%
! ACAAATGTCAAACAATGAAT+TGG - chr7_3:77463372-77463391 None:intergenic 25.0%
! TAATGGAATATGACAAAACA+AGG - chr7_3:77463847-77463866 None:intergenic 25.0%
! GAATGAATTAAAGGGAATAA+TGG - chr7_3:77463864-77463883 None:intergenic 25.0%
! TTGCATTAACATATGTTGTT+TGG + chr7_3:77464118-77464137 Msa1125990:intron 25.0%
! ATATTACAACCAATGCAAAA+AGG + chr7_3:77464481-77464500 Msa1125990:CDS 25.0%
!!! GTTATTTCTCCTAGTTTTTT+TGG + chr7_3:77464611-77464630 Msa1125990:intron 25.0%
!! TGATGTTAATTTGGGATATA+TGG + chr7_3:77464844-77464863 Msa1125990:intron 25.0%
!! GATGTTAATTTGGGATATAT+GGG + chr7_3:77464845-77464864 Msa1125990:intron 25.0%
!! ATGTTAATTTGGGATATATG+GGG + chr7_3:77464846-77464865 Msa1125990:intron 25.0%
!! TCAATTGTAAGCTTTAGTTA+TGG + chr7_3:77464904-77464923 Msa1125990:intron 25.0%
! TCGTTATCTCATTAATCAAT+AGG + chr7_3:77464950-77464969 Msa1125990:intron 25.0%
! CATTATCGGTCAAATATATT+TGG - chr7_3:77465222-77465241 None:intergenic 25.0%
! GTTATATCTATGATATTTGC+AGG - chr7_3:77465245-77465264 None:intergenic 25.0%
! AACTTAAGAAATAGAAAGGA+TGG - chr7_3:77465305-77465324 None:intergenic 25.0%
!! AACTTTTCAGCAGAATTATA+TGG + chr7_3:77465508-77465527 Msa1125990:CDS 25.0%
!!! TTATATGGTAGGTTATTTTG+TGG + chr7_3:77465523-77465542 Msa1125990:intron 25.0%
! CGAAATCTGGTTAATATTAA+AGG + chr7_3:77465907-77465926 Msa1125990:three_prime_UTR 25.0%
! GATTGAAAAAATAACACCAT+TGG - chr7_3:77466066-77466085 None:intergenic 25.0%
!!! TGGTGTTATTTTTTCAATCT+TGG + chr7_3:77466067-77466086 Msa1125990:three_prime_UTR 25.0%
!!! TGTTATTTTTTCAATCTTGG+TGG + chr7_3:77466070-77466089 Msa1125990:three_prime_UTR 25.0%
!!! AATTTTGCCATTGTCGTTTT+GGG - chr7_3:77459637-77459656 None:intergenic 30.0%
TTTCTTTCTCTTTCTCTTCT+GGG - chr7_3:77459813-77459832 None:intergenic 30.0%
! TTTTCTTTCTCTTTCTCTTC+TGG - chr7_3:77459814-77459833 None:intergenic 30.0%
TGCATTTCAAAATCTAACAC+TGG + chr7_3:77460013-77460032 Msa1125990:intron 30.0%
GGAATTAATTAATGGTAGAC+TGG + chr7_3:77460218-77460237 Msa1125990:intron 30.0%
! ATTTTTGCTTATGGTCAAAC+CGG + chr7_3:77460378-77460397 Msa1125990:CDS 30.0%
! TTCCATGGTAAATGTTTTTC+CGG - chr7_3:77460406-77460425 None:intergenic 30.0%
! GGAAATTTCAAAGGTTAGTT+TGG + chr7_3:77460745-77460764 Msa1125990:CDS 30.0%
!! AATTTCAAAGGTTAGTTTGG+AGG + chr7_3:77460748-77460767 Msa1125990:CDS 30.0%
ATTTATACTCTTCTCGAAAG+AGG + chr7_3:77460866-77460885 Msa1125990:CDS 30.0%
TTTATACTCTTCTCGAAAGA+GGG + chr7_3:77460867-77460886 Msa1125990:CDS 30.0%
CTTTACTTAACAAACAATCC+AGG + chr7_3:77460915-77460934 Msa1125990:CDS 30.0%
! TAATTAGTTCTTCACCTTCA+GGG - chr7_3:77461069-77461088 None:intergenic 30.0%
! TTAATTAGTTCTTCACCTTC+AGG - chr7_3:77461070-77461089 None:intergenic 30.0%
TAAGTGTGGTAAACTGAATT+TGG + chr7_3:77461087-77461106 Msa1125990:CDS 30.0%
TCAGAAAATATATCTCGTTC+CGG + chr7_3:77461124-77461143 Msa1125990:CDS 30.0%
GAACATTAAAAATAAGCCAG+AGG + chr7_3:77461598-77461617 Msa1125990:CDS 30.0%
TCTTTCAGTCATGTATTTGA+TGG + chr7_3:77461685-77461704 Msa1125990:intron 30.0%
GATGAAATCAACTCTTATCA+AGG + chr7_3:77461836-77461855 Msa1125990:CDS 30.0%
ACTCTTATCAAGGATCTTTA+CGG + chr7_3:77461846-77461865 Msa1125990:CDS 30.0%
GTAAGAAATCTAAGGATTCA+CGG - chr7_3:77461937-77461956 None:intergenic 30.0%
! AAATTTGTGATCCTTTTCAG+AGG + chr7_3:77461978-77461997 Msa1125990:intron 30.0%
GAAACGCATACATCAATATA+AGG - chr7_3:77462288-77462307 None:intergenic 30.0%
CACAATTGAATCTTATCAGA+AGG + chr7_3:77462350-77462369 Msa1125990:CDS 30.0%
CATTCGACATAACAACTTTA+AGG + chr7_3:77462601-77462620 Msa1125990:intron 30.0%
TGTTAAAGTTCTGTAATGAC+TGG + chr7_3:77462822-77462841 Msa1125990:intron 30.0%
GTTAAAGTTCTGTAATGACT+GGG + chr7_3:77462823-77462842 Msa1125990:intron 30.0%
CATAGTTAACATTAACCCAA+TGG - chr7_3:77462850-77462869 None:intergenic 30.0%
GCTTCATTATTTGCGAAAAT+TGG + chr7_3:77462943-77462962 Msa1125990:CDS 30.0%
CATTATTTGCGAAAATTGGT+AGG + chr7_3:77462947-77462966 Msa1125990:intron 30.0%
TATGTCTCCGGTAATTATAT+AGG + chr7_3:77463037-77463056 Msa1125990:intron 30.0%
!! TGTAGTGAACAATTTTCAAG+CGG + chr7_3:77463093-77463112 Msa1125990:CDS 30.0%
CTTATCATGAATTCCCAAAA+AGG - chr7_3:77463215-77463234 None:intergenic 30.0%
!! CTTTTTGGGAATTCATGATA+AGG + chr7_3:77463213-77463232 Msa1125990:CDS 30.0%
! TTCTTAAAGCCTCTTTTTGT+TGG + chr7_3:77463301-77463320 Msa1125990:intron 30.0%
! TCTTAAAGCCTCTTTTTGTT+GGG + chr7_3:77463302-77463321 Msa1125990:intron 30.0%
AGGCAACAAAAAAAGGATTA+AGG - chr7_3:77463410-77463429 None:intergenic 30.0%
GTGTTGAAAACAATGAAAAG+TGG - chr7_3:77463650-77463669 None:intergenic 30.0%
!! TGAATTGACACTTTTTGCTA+GGG + chr7_3:77463774-77463793 Msa1125990:CDS 30.0%
!! TGATTTTAAGAAAGCTTACG+AGG + chr7_3:77464087-77464106 Msa1125990:CDS 30.0%
! AACATATGTTGTTTGGAAGA+TGG + chr7_3:77464125-77464144 Msa1125990:intron 30.0%
!! TATATTTTTCTTGGCCTTCA+TGG + chr7_3:77464313-77464332 Msa1125990:intron 30.0%
ATCTCAAAAATCATCCATGA+AGG - chr7_3:77464330-77464349 None:intergenic 30.0%
!!! TTTTTGGTTGTGTCATCTAA+TGG + chr7_3:77464357-77464376 Msa1125990:intron 30.0%
TTGTGTCATCTAATGGTTAT+TGG + chr7_3:77464364-77464383 Msa1125990:intron 30.0%
! TTTTTCTGCTTGTATGCAAA+AGG - chr7_3:77464517-77464536 None:intergenic 30.0%
TAACACTACAGGAATTAAAC+AGG - chr7_3:77464667-77464686 None:intergenic 30.0%
TTCGGCATATGATGTTAATT+TGG + chr7_3:77464835-77464854 Msa1125990:intron 30.0%
TCGGCATATGATGTTAATTT+GGG + chr7_3:77464836-77464855 Msa1125990:intron 30.0%
CAACGTGATATCAATTACTT+TGG + chr7_3:77464980-77464999 Msa1125990:intron 30.0%
GATATCAATTACTTTGGTAC+AGG + chr7_3:77464986-77465005 Msa1125990:intron 30.0%
ATGATATTTGCAGGCATTAT+CGG - chr7_3:77465236-77465255 None:intergenic 30.0%
AAATAGAAAGGATGGAATGA+TGG - chr7_3:77465297-77465316 None:intergenic 30.0%
! ATTCATGTGATCCTTTTTCT+TGG + chr7_3:77465341-77465360 Msa1125990:intron 30.0%
GAAAAAATACGCCAAGAAAA+AGG - chr7_3:77465355-77465374 None:intergenic 30.0%
TTTCAGCAGAATTATATGGT+AGG + chr7_3:77465512-77465531 Msa1125990:intron 30.0%
TGAATCTTCTTCTGATGTAA+AGG + chr7_3:77465743-77465762 Msa1125990:CDS 30.0%
AGGATGTAATGTGATATCTA+AGG + chr7_3:77465927-77465946 Msa1125990:three_prime_UTR 30.0%
TCAAAAACCCAAAACGACAA+TGG + chr7_3:77459627-77459646 Msa1125990:five_prime_UTR 35.0%
!! CAATTTTGCCATTGTCGTTT+TGG - chr7_3:77459638-77459657 None:intergenic 35.0%
TGGCAAAATTGTGAAGACAA+AGG + chr7_3:77459647-77459666 Msa1125990:five_prime_UTR 35.0%
!! CCAGACATTTTCGATTAGTT+TGG - chr7_3:77459877-77459896 None:intergenic 35.0%
CCAAACTAATCGAAAATGTC+TGG + chr7_3:77459874-77459893 Msa1125990:exon 35.0%
CACTGGAATCGATAATTTGA+AGG + chr7_3:77460030-77460049 Msa1125990:intron 35.0%
GAAATGATTAACCTTGTCGA+AGG - chr7_3:77460174-77460193 None:intergenic 35.0%
TACCGGAAAAACATTTACCA+TGG + chr7_3:77460401-77460420 Msa1125990:CDS 35.0%
GGAAAAACATTTACCATGGA+AGG + chr7_3:77460405-77460424 Msa1125990:CDS 35.0%
TTGGACGCAAAATTATACCT+TGG - chr7_3:77460445-77460464 None:intergenic 35.0%
CTGTTTATGCAGTAAAGCAT+TGG - chr7_3:77460464-77460483 None:intergenic 35.0%
!! CTAACCTTTGAAATTTCCTC+CGG - chr7_3:77460743-77460762 None:intergenic 35.0%
ACAGAAAAGAAACAATCACC+TGG - chr7_3:77460936-77460955 None:intergenic 35.0%
! AATTAGTTCTTCACCTTCAG+GGG - chr7_3:77461068-77461087 None:intergenic 35.0%
GGTGAAGAACTAATTAAGTG+TGG + chr7_3:77461073-77461092 Msa1125990:CDS 35.0%
TATCATGTACACTACATCAC+AGG + chr7_3:77461185-77461204 Msa1125990:intron 35.0%
ATCATGTACACTACATCACA+GGG + chr7_3:77461186-77461205 Msa1125990:intron 35.0%
!! TTTGATAACGCGTCATTCAA+TGG + chr7_3:77461384-77461403 Msa1125990:intron 35.0%
CATGTAAGCATACAGCAAAA+GGG - chr7_3:77461424-77461443 None:intergenic 35.0%
TCATGTAAGCATACAGCAAA+AGG - chr7_3:77461425-77461444 None:intergenic 35.0%
GTTTACTTCGTGATTCACTT+GGG + chr7_3:77461480-77461499 Msa1125990:CDS 35.0%
TTTACTTCGTGATTCACTTG+GGG + chr7_3:77461481-77461500 Msa1125990:CDS 35.0%
TTCTTCTAAGCAATGAACAG+CGG - chr7_3:77461543-77461562 None:intergenic 35.0%
AGAAGAAACTTTGAGCACAT+TGG + chr7_3:77461556-77461575 Msa1125990:CDS 35.0%
CACATTGGATTATGCACATA+GGG + chr7_3:77461571-77461590 Msa1125990:CDS 35.0%
CAGGTGAAAAACAATGCTAT+AGG - chr7_3:77461779-77461798 None:intergenic 35.0%
GAACTGAGGTAAGAAATCTA+AGG - chr7_3:77461945-77461964 None:intergenic 35.0%
! AGTAGCATAAACCTCTGAAA+AGG - chr7_3:77461992-77462011 None:intergenic 35.0%
TATGCTACTCGTGAGAAAAA+TGG + chr7_3:77462003-77462022 Msa1125990:CDS 35.0%
ATGCTACTCGTGAGAAAAAT+GGG + chr7_3:77462004-77462023 Msa1125990:CDS 35.0%
AAATGGGGTCTATATTCCAA+AGG + chr7_3:77462020-77462039 Msa1125990:CDS 35.0%
TCCAAAGGAAAGATACTATC+AGG + chr7_3:77462035-77462054 Msa1125990:CDS 35.0%
TCCTGATAGTATCTTTCCTT+TGG - chr7_3:77462039-77462058 None:intergenic 35.0%
GAAACAAACCAAGACTAAGA+AGG - chr7_3:77462083-77462102 None:intergenic 35.0%
AATAGTCATATCGCTACAGT+TGG - chr7_3:77462105-77462124 None:intergenic 35.0%
! GTTACATAGACCAAAAGTGT+CGG - chr7_3:77462146-77462165 None:intergenic 35.0%
!! ACTTAGAGTAGTGGGTTAAA+TGG - chr7_3:77462264-77462283 None:intergenic 35.0%
TATAAGGGACTTAGAGTAGT+GGG - chr7_3:77462272-77462291 None:intergenic 35.0%
ATATAAGGGACTTAGAGTAG+TGG - chr7_3:77462273-77462292 None:intergenic 35.0%
TGTATGCGTTTCTTCTGTTA+AGG + chr7_3:77462296-77462315 Msa1125990:intron 35.0%
AAACTTGAACAAGACTAGCA+AGG + chr7_3:77462647-77462666 Msa1125990:CDS 35.0%
TCGATATACCGTCAATGAAA+AGG + chr7_3:77462704-77462723 Msa1125990:CDS 35.0%
! GATGAACTCCTTTTCATTGA+CGG - chr7_3:77462715-77462734 None:intergenic 35.0%
ATATCTGAACAGAGAAAAGC+AGG + chr7_3:77462735-77462754 Msa1125990:CDS 35.0%
CTGTAATGTTCATTTGAGTG+AGG + chr7_3:77462796-77462815 Msa1125990:intron 35.0%
TGATTTAGAGAAAGCTCTTC+AGG + chr7_3:77462915-77462934 Msa1125990:CDS 35.0%
TATTTGCGAAAATTGGTAGG+TGG + chr7_3:77462950-77462969 Msa1125990:intron 35.0%
CATGAATTCCCAAAAAGGAA+TGG - chr7_3:77463210-77463229 None:intergenic 35.0%
ACAAAAAGCCCAACAAAAAG+AGG - chr7_3:77463313-77463332 None:intergenic 35.0%
!!! ATCCTTTTTTTGTTGCCTGT+AGG + chr7_3:77463412-77463431 Msa1125990:intron 35.0%
AAGAGAAAATGAAAGACCTG+AGG + chr7_3:77463450-77463469 Msa1125990:CDS 35.0%
AGAGAAAATGAAAGACCTGA+GGG + chr7_3:77463451-77463470 Msa1125990:CDS 35.0%
AAATGTTGTGCGTTTGCATA+AGG + chr7_3:77463505-77463524 Msa1125990:CDS 35.0%
TTCTTCAATTGAATGACCGT+GGG - chr7_3:77463576-77463595 None:intergenic 35.0%
!! GTGAATTGACACTTTTTGCT+AGG + chr7_3:77463773-77463792 Msa1125990:CDS 35.0%
AAAGAGATTCAATCTTAGCG+TGG + chr7_3:77463946-77463965 Msa1125990:intron 35.0%
TCTTAGCGTGGAACAAATAA+AGG + chr7_3:77463958-77463977 Msa1125990:CDS 35.0%
ATCTTGAAGAGTTTGTAGCA+CGG + chr7_3:77464035-77464054 Msa1125990:CDS 35.0%
CATCTTGTTCTATTCTGTAC+AGG + chr7_3:77464174-77464193 Msa1125990:intron 35.0%
! AAGTCCATCTTGTCAGTTTT+TGG + chr7_3:77464269-77464288 Msa1125990:intron 35.0%
GTCATCTAATGGTTATTGGT+TGG + chr7_3:77464368-77464387 Msa1125990:intron 35.0%
!! ACTCAAAGCTTGTTGATCTT+AGG + chr7_3:77464403-77464422 Msa1125990:CDS 35.0%
!! CTCAAAGCTTGTTGATCTTA+GGG + chr7_3:77464404-77464423 Msa1125990:CDS 35.0%
AAGAACAAGTCATTCTTCGA+TGG + chr7_3:77464438-77464457 Msa1125990:CDS 35.0%
CAACCAATGCAAAAAGGAAA+TGG + chr7_3:77464487-77464506 Msa1125990:CDS 35.0%
GGATGTAGACCAAAAAAACT+AGG - chr7_3:77464623-77464642 None:intergenic 35.0%
AGTGTTAGAATGTGACTAAG+AGG - chr7_3:77464644-77464663 None:intergenic 35.0%
TAGTGTTAGTACTGCTCATT+CGG + chr7_3:77464679-77464698 Msa1125990:intron 35.0%
ATGAGGCTGTAAATGAGTTA+GGG + chr7_3:77464726-77464745 Msa1125990:CDS 35.0%
CTCTGTCGCAAAAATATGTT+TGG - chr7_3:77464753-77464772 None:intergenic 35.0%
! GAGTTATATGGCATTAGCTT+TGG + chr7_3:77464881-77464900 Msa1125990:intron 35.0%
ACATCTCAAGTGTATTTGCA+TGG - chr7_3:77465436-77465455 None:intergenic 35.0%
ATGTTTAGAGAGAATCACTC+AGG + chr7_3:77465452-77465471 Msa1125990:CDS 35.0%
TGTTTAGAGAGAATCACTCA+GGG + chr7_3:77465453-77465472 Msa1125990:CDS 35.0%
CATTAATTCAATTGGGTGAG+AGG - chr7_3:77465798-77465817 None:intergenic 35.0%
CTCTCACCCAATTGAATTAA+TGG + chr7_3:77465796-77465815 Msa1125990:CDS 35.0%
TCACCCAATTGAATTAATGG+TGG + chr7_3:77465799-77465818 Msa1125990:exon 35.0%
CCACCACCATTAATTCAATT+GGG - chr7_3:77465805-77465824 None:intergenic 35.0%
ACCACCACCATTAATTCAAT+TGG - chr7_3:77465806-77465825 None:intergenic 35.0%
AGTTTGAAGAATGCGAAATC+TGG + chr7_3:77465894-77465913 Msa1125990:three_prime_UTR 35.0%
TTGTGTCTAAATCCCATCTT+GGG + chr7_3:77465958-77465977 Msa1125990:three_prime_UTR 35.0%
GCTATATTTCATCCCAAGAT+GGG - chr7_3:77465973-77465992 None:intergenic 35.0%
AGCTATATTTCATCCCAAGA+TGG - chr7_3:77465974-77465993 None:intergenic 35.0%
! AGATCTACGACTCAACGTTT+TGG - chr7_3:77459708-77459727 None:intergenic 40.0%
ACGTTGAGTCGTAGATCTAA+AGG + chr7_3:77459710-77459729 Msa1125990:five_prime_UTR 40.0%
CGTTGAGTCGTAGATCTAAA+GGG + chr7_3:77459711-77459730 Msa1125990:five_prime_UTR 40.0%
! TTCAAGTTCTACTTCGTTGC+AGG + chr7_3:77459917-77459936 Msa1125990:CDS 40.0%
!! GCTGTTTCTCAGAATATTGC+CGG + chr7_3:77460125-77460144 Msa1125990:CDS 40.0%
! AGTTCTCTTTGTTGTGCAGA+AGG - chr7_3:77460300-77460319 None:intergenic 40.0%
! GGTAAATGTTTTTCCGGTAC+CGG - chr7_3:77460400-77460419 None:intergenic 40.0%
! TCTTTTGCATTCTCCTTCCA+TGG - chr7_3:77460421-77460440 None:intergenic 40.0%
AGGAGAATGCAAAAGATCCA+AGG + chr7_3:77460425-77460444 Msa1125990:CDS 40.0%
AAAATCTGCTTAACAGCCCT+CGG - chr7_3:77460632-77460651 None:intergenic 40.0%
!! GATTACTGATTTGCTTGCTC+CGG + chr7_3:77460721-77460740 Msa1125990:CDS 40.0%
AAAAAAGCAGCTGCCTCTTA+TGG + chr7_3:77460778-77460797 Msa1125990:CDS 40.0%
GTGTGGTAAACTGAATTTGG+TGG + chr7_3:77461090-77461109 Msa1125990:CDS 40.0%
! ACTGAATTTGGTGGATCTTG+CGG + chr7_3:77461099-77461118 Msa1125990:CDS 40.0%
TCATGTACACTACATCACAG+GGG + chr7_3:77461187-77461206 Msa1125990:intron 40.0%
ACCTTGGTCATATTCCATAC+AGG + chr7_3:77461345-77461364 Msa1125990:CDS 40.0%
ACCTGTATGGAATATGACCA+AGG - chr7_3:77461349-77461368 None:intergenic 40.0%
CGTTTACTTCGTGATTCACT+TGG + chr7_3:77461479-77461498 Msa1125990:CDS 40.0%
TTACTTCGTGATTCACTTGG+GGG + chr7_3:77461482-77461501 Msa1125990:CDS 40.0%
TCTTCTAAGCAATGAACAGC+GGG - chr7_3:77461542-77461561 None:intergenic 40.0%
GCACATTGGATTATGCACAT+AGG + chr7_3:77461570-77461589 Msa1125990:CDS 40.0%
CACAATCAACAACAAACCTC+TGG - chr7_3:77461617-77461636 None:intergenic 40.0%
GAAATTGAACGCCTTAAGTC+AGG + chr7_3:77461870-77461889 Msa1125990:CDS 40.0%
AAAGCAACTCACCTGACTTA+AGG - chr7_3:77461884-77461903 None:intergenic 40.0%
TTGTCAACAATGCAGAACTG+AGG - chr7_3:77461959-77461978 None:intergenic 40.0%
TGCTACTCGTGAGAAAAATG+GGG + chr7_3:77462005-77462024 Msa1125990:CDS 40.0%
TCAGGAAGAGATTGAGAAGA+AGG + chr7_3:77462053-77462072 Msa1125990:CDS 40.0%
AAGGTAGTCCTTCTTAGTCT+TGG + chr7_3:77462072-77462091 Msa1125990:intron 40.0%
! TTCATCAAGACCGACACTTT+TGG + chr7_3:77462133-77462152 Msa1125990:intron 40.0%
CGTTTCTTCTGTTAAGGCTA+TGG + chr7_3:77462302-77462321 Msa1125990:intron 40.0%
ATGTTTCAACCAGCAACTTG+AGG + chr7_3:77462467-77462486 Msa1125990:intron 40.0%
! TTCTCATATCCTCAAGTTGC+TGG - chr7_3:77462479-77462498 None:intergenic 40.0%
CAACAAACTTGATACCACTG+AGG + chr7_3:77462539-77462558 Msa1125990:CDS 40.0%
ACAATGATATCAGACCTCAG+TGG - chr7_3:77462556-77462575 None:intergenic 40.0%
!! CTTTAGTTCTTCCTCTCTAC+TGG - chr7_3:77462679-77462698 None:intergenic 40.0%
ACAGAGAAAAGCAGGTATTC+AGG + chr7_3:77462743-77462762 Msa1125990:intron 40.0%
AACACATGCTTGATGAGCTA+GGG - chr7_3:77462887-77462906 None:intergenic 40.0%
AAACACATGCTTGATGAGCT+AGG - chr7_3:77462888-77462907 None:intergenic 40.0%
ACATCGTTGTCTGAACAGAA+CGG + chr7_3:77463157-77463176 Msa1125990:CDS 40.0%
! AAGCTCTGCCATTCCTTTTT+GGG + chr7_3:77463199-77463218 Msa1125990:CDS 40.0%
AGTGTCAACAACAAGAACAG+CGG - chr7_3:77463261-77463280 None:intergenic 40.0%
ATTCACTTGAGCTTCTTGTC+TGG + chr7_3:77463342-77463361 Msa1125990:intron 40.0%
!!! CTTTTTTTGTTGCCTGTAGG+CGG + chr7_3:77463415-77463434 Msa1125990:intron 40.0%
GGTGTATGTGTCTCATATTG+AGG + chr7_3:77463475-77463494 Msa1125990:CDS 40.0%
CTTCTTCAATTGAATGACCG+TGG - chr7_3:77463577-77463596 None:intergenic 40.0%
GAATCAGTTCCTTACAACTG+CGG + chr7_3:77463693-77463712 Msa1125990:intron 40.0%
AAATATTGAGCCAGCTTCTG+TGG - chr7_3:77463719-77463738 None:intergenic 40.0%
AGCTGTCTTTCAACACAACA+TGG + chr7_3:77463751-77463770 Msa1125990:CDS 40.0%
AAAGGAGATTTCTGAGCGAT+CGG + chr7_3:77463976-77463995 Msa1125990:CDS 40.0%
TCTTGAAGAGTTTGTAGCAC+GGG + chr7_3:77464036-77464055 Msa1125990:CDS 40.0%
CAATGCTCTCTGTTTGCATT+TGG - chr7_3:77464066-77464085 None:intergenic 40.0%
ATCGCCAAAAACTGACAAGA+TGG - chr7_3:77464276-77464295 None:intergenic 40.0%
!! CTGCCATTTCCTTTTTGCAT+TGG - chr7_3:77464493-77464512 None:intergenic 40.0%
ATAACACATACCTTTGCTGC+AGG - chr7_3:77464596-77464615 None:intergenic 40.0%
ATGAGCAGTACTAACACTAC+AGG - chr7_3:77464678-77464697 None:intergenic 40.0%
CATGAGGCTGTAAATGAGTT+AGG + chr7_3:77464725-77464744 Msa1125990:CDS 40.0%
TGAGGCTGTAAATGAGTTAG+GGG + chr7_3:77464727-77464746 Msa1125990:CDS 40.0%
! ATTTGGGATATATGGGGATG+CGG + chr7_3:77464852-77464871 Msa1125990:intron 40.0%
!!! GATTTTTTGCAGCAGTTCGA+TGG + chr7_3:77465096-77465115 Msa1125990:CDS 40.0%
! GAGTATTGTGGTCTGGATAT+TGG + chr7_3:77465120-77465139 Msa1125990:intron 40.0%
CTTCAGCTGCAATTTGCAAA+TGG - chr7_3:77465179-77465198 None:intergenic 40.0%
! TGATTTGTGTTGTGTCTTGC+AGG + chr7_3:77465593-77465612 Msa1125990:intron 40.0%
GAGTCTATTGTACCCTTACT+TGG - chr7_3:77465666-77465685 None:intergenic 40.0%
CCCAATTGAATTAATGGTGG+TGG + chr7_3:77465802-77465821 Msa1125990:exon 40.0%
CTTGTGTCTAAATCCCATCT+TGG + chr7_3:77465957-77465976 Msa1125990:three_prime_UTR 40.0%
TGAAAATGAGAGCGGGGTAA+GGG - chr7_3:77459786-77459805 None:intergenic 45.0%
TGGGTGTGTGAAAATGAGAG+CGG - chr7_3:77459794-77459813 None:intergenic 45.0%
CGTAACTCGTCGTCACTAAA+CGG - chr7_3:77460056-77460075 None:intergenic 45.0%
TCGTTACAAGTCACCACTTG+CGG - chr7_3:77460089-77460108 None:intergenic 45.0%
AACCCTATCGATGTGTTTGC+CGG - chr7_3:77460147-77460166 None:intergenic 45.0%
! TAGGGTTTTCACCTTCGACA+AGG + chr7_3:77460160-77460179 Msa1125990:CDS 45.0%
TTATTGTAGAGTGGGCCGAA+TGG + chr7_3:77460578-77460597 Msa1125990:intron 45.0%
TATTGTAGAGTGGGCCGAAT+GGG + chr7_3:77460579-77460598 Msa1125990:intron 45.0%
! CAGATTTTTGACACGCTCGA+GGG + chr7_3:77460644-77460663 Msa1125990:CDS 45.0%
TGCTCCGGAGGAAATTTCAA+AGG + chr7_3:77460736-77460755 Msa1125990:CDS 45.0%
CCTTTACCATCCTCCATAAG+AGG - chr7_3:77460794-77460813 None:intergenic 45.0%
CCTCTTATGGAGGATGGTAA+AGG + chr7_3:77460791-77460810 Msa1125990:CDS 45.0%
CTTATGGAGGATGGTAAAGG+TGG + chr7_3:77460794-77460813 Msa1125990:CDS 45.0%
AAAGGTGGAGTTCTTGTGAG+AGG + chr7_3:77460809-77460828 Msa1125990:CDS 45.0%
AAGGTGGAGTTCTTGTGAGA+GGG + chr7_3:77460810-77460829 Msa1125990:CDS 45.0%
! AGTTTCTGCAGTGCGTCTTT+TGG - chr7_3:77460897-77460916 None:intergenic 45.0%
ATCAAAGAAGCAACCCCTGA+AGG + chr7_3:77461052-77461071 Msa1125990:CDS 45.0%
! CTGAATTTGGTGGATCTTGC+GGG + chr7_3:77461100-77461119 Msa1125990:CDS 45.0%
CGCTAGGGAGGTAATACATT+CGG + chr7_3:77461147-77461166 Msa1125990:intron 45.0%
TGTCGCTATAATGCACGTCT+TGG - chr7_3:77461513-77461532 None:intergenic 45.0%
TTCTAAGCAATGAACAGCGG+GGG - chr7_3:77461540-77461559 None:intergenic 45.0%
CTTCTAAGCAATGAACAGCG+GGG - chr7_3:77461541-77461560 None:intergenic 45.0%
GCTGATCAGATTGAGCAGAT+GGG + chr7_3:77462324-77462343 Msa1125990:CDS 45.0%
GCATTACAGAGACAACAAGC+AGG - chr7_3:77462431-77462450 None:intergenic 45.0%
TCTGTAATGACTGGGACCAT+TGG + chr7_3:77462831-77462850 Msa1125990:intron 45.0%
CTGTAATGACTGGGACCATT+GGG + chr7_3:77462832-77462851 Msa1125990:intron 45.0%
GCAAAGAGAACCAACCTTCT+GGG - chr7_3:77463125-77463144 None:intergenic 45.0%
TGCAAAGAGAACCAACCTTC+TGG - chr7_3:77463126-77463145 None:intergenic 45.0%
GAACAGAACGGACATCTACA+AGG + chr7_3:77463169-77463188 Msa1125990:CDS 45.0%
! GAAGCTCTGCCATTCCTTTT+TGG + chr7_3:77463198-77463217 Msa1125990:CDS 45.0%
AACAACAAGAACAGCGGCTT+TGG - chr7_3:77463255-77463274 None:intergenic 45.0%
CGCCTACAGGCAACAAAAAA+AGG - chr7_3:77463417-77463436 None:intergenic 45.0%
GAAAATGAAAGACCTGAGGG+CGG + chr7_3:77463454-77463473 Msa1125990:CDS 45.0%
TTCAATTGAATGACCGTGGG+AGG - chr7_3:77463573-77463592 None:intergenic 45.0%
GGAGCAATCAAAATCCGAGT+CGG + chr7_3:77464195-77464214 Msa1125990:intron 45.0%
AGCAATGAGTTTCTCCGACT+CGG - chr7_3:77464212-77464231 None:intergenic 45.0%
!! TGGTTATTGGTTGGTCTTGC+AGG + chr7_3:77464377-77464396 Msa1125990:intron 45.0%
CTTGTTGATCTTAGGGAGAG+TGG + chr7_3:77464411-77464430 Msa1125990:CDS 45.0%
! AGTACTGCTCATTCGGCTTT+TGG + chr7_3:77464686-77464705 Msa1125990:CDS 45.0%
ACAAGTGAAGAGGACACATG+AGG + chr7_3:77464709-77464728 Msa1125990:CDS 45.0%
TTGCGACAGAGTCACTTATC+AGG + chr7_3:77464762-77464781 Msa1125990:CDS 45.0%
AGAGTCACTTATCAGGTGTG+TGG + chr7_3:77464769-77464788 Msa1125990:intron 45.0%
! TTTGGGATATATGGGGATGC+GGG + chr7_3:77464853-77464872 Msa1125990:intron 45.0%
GTTCTTTGCCACATCTTCCT+CGG - chr7_3:77465070-77465089 None:intergenic 45.0%
! CAGTTCGATGGTGAGTATTG+TGG + chr7_3:77465108-77465127 Msa1125990:intron 45.0%
TTCACGTTCTTCTGCAGATG+TGG - chr7_3:77465381-77465400 None:intergenic 45.0%
AAGCTGCTTCCATTGAACAC+AGG + chr7_3:77465477-77465496 Msa1125990:CDS 45.0%
AGCTGCTTCCATTGAACACA+GGG + chr7_3:77465478-77465497 Msa1125990:CDS 45.0%
TTCACATGCCCTGTGTTCAA+TGG - chr7_3:77465489-77465508 None:intergenic 45.0%
!! CTTACTGGTGTTGTACCACT+AGG - chr7_3:77465627-77465646 None:intergenic 45.0%
AAGAAGGGCTTCAATTGGCA+AGG - chr7_3:77465697-77465716 None:intergenic 45.0%
TCCTCAAGAAGGGCTTCAAT+TGG - chr7_3:77465702-77465721 None:intergenic 45.0%
AAGCCCTTCTTGAGGAATTC+CGG + chr7_3:77465706-77465725 Msa1125990:CDS 45.0%
TTCCCGGAATTCCTCAAGAA+GGG - chr7_3:77465712-77465731 None:intergenic 45.0%
TTTCCCGGAATTCCTCAAGA+AGG - chr7_3:77465713-77465732 None:intergenic 45.0%
GGAGAACGTGGAATAAGAGA+CGG - chr7_3:77465777-77465796 None:intergenic 45.0%
!! TAATTAATAATACAATAAAA+AGG - chr7_3:77463621-77463640 None:intergenic 5.0%
! GTAAGGGAATGGTAGCGTTC+GGG - chr7_3:77459770-77459789 None:intergenic 50.0%
! GGTAAGGGAATGGTAGCGTT+CGG - chr7_3:77459771-77459790 None:intergenic 50.0%
GTGAAAATGAGAGCGGGGTA+AGG - chr7_3:77459787-77459806 None:intergenic 50.0%
GGTGTGTGAAAATGAGAGCG+GGG - chr7_3:77459792-77459811 None:intergenic 50.0%
GGGTGTGTGAAAATGAGAGC+GGG - chr7_3:77459793-77459812 None:intergenic 50.0%
TTGCCGGCAAACACATCGAT+AGG + chr7_3:77460141-77460160 Msa1125990:CDS 50.0%
TGCCGGCAAACACATCGATA+GGG + chr7_3:77460142-77460161 Msa1125990:CDS 50.0%
GCTTATGGTCAAACCGGTAC+CGG + chr7_3:77460384-77460403 Msa1125990:CDS 50.0%
ATTGTAGAGTGGGCCGAATG+GGG + chr7_3:77460580-77460599 Msa1125990:intron 50.0%
AGAAGCAGGAGTGATTCCGA+GGG + chr7_3:77460613-77460632 Msa1125990:CDS 50.0%
! GCAGATTTTTGACACGCTCG+AGG + chr7_3:77460643-77460662 Msa1125990:CDS 50.0%
!! TACTGATTTGCTTGCTCCGG+AGG + chr7_3:77460724-77460743 Msa1125990:CDS 50.0%
AAAGCAGCTGCCTCTTATGG+AGG + chr7_3:77460781-77460800 Msa1125990:CDS 50.0%
TGGAGTTCTTGTGAGAGGGT+TGG + chr7_3:77460814-77460833 Msa1125990:CDS 50.0%
AGTTCTTGTGAGAGGGTTGG+AGG + chr7_3:77460817-77460836 Msa1125990:CDS 50.0%
CAGGGGTTGCTTCTTTGATG+TGG - chr7_3:77461051-77461070 None:intergenic 50.0%
ATATATCTCGTTCCGGCGCT+AGG + chr7_3:77461131-77461150 Msa1125990:CDS 50.0%
TATATCTCGTTCCGGCGCTA+GGG + chr7_3:77461132-77461151 Msa1125990:CDS 50.0%
ATGTATTACCTCCCTAGCGC+CGG - chr7_3:77461146-77461165 None:intergenic 50.0%
GCGAGTGATTAATGCCCTTG+TGG + chr7_3:77461319-77461338 Msa1125990:CDS 50.0%
! ATGACCAAGGTGCTCCACAA+GGG - chr7_3:77461336-77461355 None:intergenic 50.0%
! TATGACCAAGGTGCTCCACA+AGG - chr7_3:77461337-77461356 None:intergenic 50.0%
GGCTGATCAGATTGAGCAGA+TGG + chr7_3:77462323-77462342 Msa1125990:CDS 50.0%
GAACGGACATCTACAAGGTG+TGG + chr7_3:77463174-77463193 Msa1125990:CDS 50.0%
TCAAATCGATAGCCGCCTAC+AGG - chr7_3:77463430-77463449 None:intergenic 50.0%
AAGCTCAGATGCATCGTTGG+AGG + chr7_3:77463529-77463548 Msa1125990:CDS 50.0%
TCATCTGCCATATCCTCCCA+CGG + chr7_3:77463557-77463576 Msa1125990:CDS 50.0%
TGAATGACCGTGGGAGGATA+TGG - chr7_3:77463567-77463586 None:intergenic 50.0%
CGATGGACATGTGTCATCAG+TGG + chr7_3:77464455-77464474 Msa1125990:CDS 50.0%
!! TGCAGCAAAGCATTGCCGTA+TGG + chr7_3:77464563-77464582 Msa1125990:CDS 50.0%
!! AGCAAAGCATTGCCGTATGG+AGG + chr7_3:77464566-77464585 Msa1125990:CDS 50.0%
! CGGCTTTTGGACAAGTGAAG+AGG + chr7_3:77464699-77464718 Msa1125990:CDS 50.0%
GTCACTTATCAGGTGTGTGG+TGG + chr7_3:77464772-77464791 Msa1125990:intron 50.0%
TTGGGATATATGGGGATGCG+GGG + chr7_3:77464854-77464873 Msa1125990:intron 50.0%
ATGCGGGGGAGTGAGTTATA+TGG + chr7_3:77464869-77464888 Msa1125990:intron 50.0%
! CGATGGTGAGTATTGTGGTC+TGG + chr7_3:77465113-77465132 Msa1125990:intron 50.0%
TTGCAGGACTATGAGCCTAG+TGG + chr7_3:77465609-77465628 Msa1125990:intron 50.0%
ACCAGTAAGATGTGAGCCTG+AGG + chr7_3:77465638-77465657 Msa1125990:CDS 50.0%
ACCTCAGGCTCACATCTTAC+TGG - chr7_3:77465642-77465661 None:intergenic 50.0%
TGAGCCTGAGGTTCCAAGTA+AGG + chr7_3:77465650-77465669 Msa1125990:CDS 50.0%
GAGCCTGAGGTTCCAAGTAA+GGG + chr7_3:77465651-77465670 Msa1125990:CDS 50.0%
GTACCCTTACTTGGAACCTC+AGG - chr7_3:77465657-77465676 None:intergenic 50.0%
GCCAATTGAAGCCCTTCTTG+AGG + chr7_3:77465698-77465717 Msa1125990:CDS 50.0%
AGCCCTTCTTGAGGAATTCC+GGG + chr7_3:77465707-77465726 Msa1125990:CDS 50.0%
AATTGGGTGAGAGGAGAACG+TGG - chr7_3:77465789-77465808 None:intergenic 50.0%
! GGTGGTGGTATCAACTTGCT+CGG + chr7_3:77465817-77465836 Msa1125990:three_prime_UTR 50.0%
ACTTGCTCGGTTGTCTGTTG+TGG + chr7_3:77465830-77465849 Msa1125990:three_prime_UTR 50.0%
ATGAGAGCGGGGTAAGGGAA+TGG - chr7_3:77459781-77459800 None:intergenic 55.0%
TCTGGAGGCAACTCCCCATT+CGG - chr7_3:77460596-77460615 None:intergenic 55.0%
GGAATCACTCCTGCTTCTGG+AGG - chr7_3:77460611-77460630 None:intergenic 55.0%
CTCGGAATCACTCCTGCTTC+TGG - chr7_3:77460614-77460633 None:intergenic 55.0%
CAGAAGCAGGAGTGATTCCG+AGG + chr7_3:77460612-77460631 Msa1125990:CDS 55.0%
CAGCTGCCTCTTATGGAGGA+TGG + chr7_3:77460785-77460804 Msa1125990:CDS 55.0%
TAGGGTCGTGCTAGAGAAGC+TGG + chr7_3:77461266-77461285 Msa1125990:intron 55.0%
! AATGCCCTTGTGGAGCACCT+TGG + chr7_3:77461329-77461348 Msa1125990:CDS 55.0%
! CAAGGTGCTTGCCAGTAGAG+AGG + chr7_3:77462665-77462684 Msa1125990:CDS 55.0%
TCAAGCGGAACTTGCCCAGA+AGG + chr7_3:77463108-77463127 Msa1125990:CDS 55.0%
GGCAAGCTCAGATGCATCGT+TGG + chr7_3:77463526-77463545 Msa1125990:CDS 55.0%
CTTCTGTGGCCGCAGTTGTA+AGG - chr7_3:77463705-77463724 None:intergenic 55.0%
!! GCTGCAGGAGTACCTCCATA+CGG - chr7_3:77464581-77464600 None:intergenic 55.0%
!! TGGAGGTACTCCTGCAGCAA+AGG + chr7_3:77464583-77464602 Msa1125990:CDS 55.0%
TGGGATATATGGGGATGCGG+GGG + chr7_3:77464855-77464874 Msa1125990:intron 55.0%
CCTCTGCAACATGCTGCACA+TGG - chr7_3:77465026-77465045 None:intergenic 55.0%
CCATGTGCAGCATGTTGCAG+AGG + chr7_3:77465023-77465042 Msa1125990:CDS 55.0%
CGTTCTTCTGCAGATGTGGC+TGG - chr7_3:77465377-77465396 None:intergenic 55.0%
! TTTTGGCAACTCCTCCCCCA+TGG + chr7_3:77466008-77466027 Msa1125990:three_prime_UTR 55.0%
TTTGGCAACTCCTCCCCCAT+GGG + chr7_3:77466009-77466028 Msa1125990:three_prime_UTR 55.0%
ACGAAGCAATGCGCCGCAAG+TGG + chr7_3:77460073-77460092 Msa1125990:CDS 60.0%
GCGGAACTTGCCCAGAAGGT+TGG + chr7_3:77463112-77463131 Msa1125990:CDS 60.0%
GAGACACATACACCGCCCTC+AGG - chr7_3:77463469-77463488 None:intergenic 60.0%
ACAACTGCGGCCACAGAAGC+TGG + chr7_3:77463706-77463725 Msa1125990:CDS 60.0%
AGCAGCAGCCGAGGAAGATG+TGG + chr7_3:77465059-77465078 Msa1125990:CDS 60.0%
TTGGCAACTCCTCCCCCATG+GGG + chr7_3:77466010-77466029 Msa1125990:three_prime_UTR 60.0%
AACTCCTCCCCCATGGGGAA+GGG + chr7_3:77466015-77466034 Msa1125990:three_prime_UTR 60.0%
ATACACCGCCCCTTCCCCAT+GGG - chr7_3:77466027-77466046 None:intergenic 60.0%
AATACACCGCCCCTTCCCCA+TGG - chr7_3:77466028-77466047 None:intergenic 60.0%
GGGGAGTTGCCTCCAGAAGC+AGG + chr7_3:77460599-77460618 Msa1125990:CDS 65.0%
ATCTCGTTCCGGCGCTAGGG+AGG + chr7_3:77461135-77461154 Msa1125990:CDS 65.0%
TTCTGCACGAGCAGCAGCCG+AGG + chr7_3:77465050-77465069 Msa1125990:CDS 65.0%
CAACTCCTCCCCCATGGGGA+AGG + chr7_3:77466014-77466033 Msa1125990:three_prime_UTR 65.0%
ACTCCTCCCCCATGGGGAAG+GGG + chr7_3:77466016-77466035 Msa1125990:three_prime_UTR 65.0%
TACACCGCCCCTTCCCCATG+GGG - chr7_3:77466026-77466045 None:intergenic 65.0%
ACACCGCCCCTTCCCCATGG+GGG - chr7_3:77466025-77466044 None:intergenic 70.0%
CCTCCCCCATGGGGAAGGGG+CGG + chr7_3:77466019-77466038 Msa1125990:three_prime_UTR 75.0%
! CCGCCCCTTCCCCATGGGGG+AGG - chr7_3:77466022-77466041 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 77459616 77466194 77459616 ID=Msa1125990;Name=Msa1125990
chr7_3 mRNA 77459616 77466194 77459616 ID=Msa1125990-mRNA-1;Parent=Msa1125990;Name=Msa1125990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=273|1|1|1|1|1|23|379|1007
chr7_3 exon 77459616 77459938 77459616 ID=Msa1125990-mRNA-1:exon:21412;Parent=Msa1125990-mRNA-1
chr7_3 exon 77460052 77460181 77460052 ID=Msa1125990-mRNA-1:exon:21413;Parent=Msa1125990-mRNA-1
chr7_3 exon 77460288 77460446 77460288 ID=Msa1125990-mRNA-1:exon:21414;Parent=Msa1125990-mRNA-1
chr7_3 exon 77460587 77460936 77460587 ID=Msa1125990-mRNA-1:exon:21415;Parent=Msa1125990-mRNA-1
chr7_3 exon 77461018 77461156 77461018 ID=Msa1125990-mRNA-1:exon:21416;Parent=Msa1125990-mRNA-1
chr7_3 exon 77461269 77461366 77461269 ID=Msa1125990-mRNA-1:exon:21417;Parent=Msa1125990-mRNA-1
chr7_3 exon 77461463 77461619 77461463 ID=Msa1125990-mRNA-1:exon:21418;Parent=Msa1125990-mRNA-1
chr7_3 exon 77461822 77461891 77461822 ID=Msa1125990-mRNA-1:exon:21419;Parent=Msa1125990-mRNA-1
chr7_3 exon 77461998 77462074 77461998 ID=Msa1125990-mRNA-1:exon:21420;Parent=Msa1125990-mRNA-1
chr7_3 exon 77462318 77462371 77462318 ID=Msa1125990-mRNA-1:exon:21421;Parent=Msa1125990-mRNA-1
chr7_3 exon 77462480 77462560 77462480 ID=Msa1125990-mRNA-1:exon:21422;Parent=Msa1125990-mRNA-1
chr7_3 exon 77462645 77462756 77462645 ID=Msa1125990-mRNA-1:exon:21423;Parent=Msa1125990-mRNA-1
chr7_3 exon 77462878 77462964 77462878 ID=Msa1125990-mRNA-1:exon:21424;Parent=Msa1125990-mRNA-1
chr7_3 exon 77463059 77463234 77463059 ID=Msa1125990-mRNA-1:exon:21425;Parent=Msa1125990-mRNA-1
chr7_3 exon 77463434 77463595 77463434 ID=Msa1125990-mRNA-1:exon:21426;Parent=Msa1125990-mRNA-1
chr7_3 exon 77463700 77463807 77463700 ID=Msa1125990-mRNA-1:exon:21427;Parent=Msa1125990-mRNA-1
chr7_3 exon 77463950 77464108 77463950 ID=Msa1125990-mRNA-1:exon:21428;Parent=Msa1125990-mRNA-1
chr7_3 exon 77464196 77464279 77464196 ID=Msa1125990-mRNA-1:exon:21429;Parent=Msa1125990-mRNA-1
chr7_3 exon 77464399 77464604 77464399 ID=Msa1125990-mRNA-1:exon:21430;Parent=Msa1125990-mRNA-1
chr7_3 exon 77464682 77464783 77464682 ID=Msa1125990-mRNA-1:exon:21431;Parent=Msa1125990-mRNA-1
chr7_3 exon 77465008 77465117 77465008 ID=Msa1125990-mRNA-1:exon:21432;Parent=Msa1125990-mRNA-1
chr7_3 exon 77465378 77465529 77465378 ID=Msa1125990-mRNA-1:exon:21433;Parent=Msa1125990-mRNA-1
chr7_3 exon 77465615 77466194 77465615 ID=Msa1125990-mRNA-1:exon:21434;Parent=Msa1125990-mRNA-1
chr7_3 five_prime_UTR 77459616 77459888 77459616 ID=Msa1125990-mRNA-1:five_prime_utr;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77459889 77459938 77459889 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77460052 77460181 77460052 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77460288 77460446 77460288 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77460587 77460936 77460587 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77461018 77461156 77461018 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77461269 77461366 77461269 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77461463 77461619 77461463 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77461822 77461891 77461822 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77461998 77462074 77461998 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77462318 77462371 77462318 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77462480 77462560 77462480 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77462645 77462756 77462645 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77462878 77462964 77462878 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77463059 77463234 77463059 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77463434 77463595 77463434 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77463700 77463807 77463700 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77463950 77464108 77463950 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77464196 77464279 77464196 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77464399 77464604 77464399 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77464682 77464783 77464682 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77465008 77465117 77465008 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77465378 77465529 77465378 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 CDS 77465615 77465815 77465615 ID=Msa1125990-mRNA-1:cds;Parent=Msa1125990-mRNA-1
chr7_3 three_prime_UTR 77465816 77466194 77465816 ID=Msa1125990-mRNA-1:three_prime_utr;Parent=Msa1125990-mRNA-1
Gene Sequence

>Msa1125990

ATGTCTGGTAAAGAAAAAGGTGTTAACGTTCAAGTTCTACTTCGTTGCAGGCCGTTTAGTGACGACGAGTTACGAAGCAATGCGCCGCAAGTGGTGACTTGTAACGATTACAGTAGAGAAGTTGCTGTTTCTCAGAATATTGCCGGCAAACACATCGATAGGGTTTTCACCTTCGACAAGGTTTTTGGTCCTTCTGCACAACAAAGAGAACTTTATGAACAAGCTGTTACACCGATAGTAAATGAAGTTTTAGAAGGATTTAATTGTACTATTTTTGCTTATGGTCAAACCGGTACCGGAAAAACATTTACCATGGAAGGAGAATGCAAAAGATCCAAGAGTGGGCCGAATGGGGAGTTGCCTCCAGAAGCAGGAGTGATTCCGAGGGCTGTTAAGCAGATTTTTGACACGCTCGAGGGTCAGAATGCTGAGTATAGTGTGAAAGTTACGTTTTTAGAATTGTATAATGAGGAGATTACTGATTTGCTTGCTCCGGAGGAAATTTCAAAGGTTAGTTTGGAGGAGAAGCAAAAAAAGCAGCTGCCTCTTATGGAGGATGGTAAAGGTGGAGTTCTTGTGAGAGGGTTGGAGGAAGAAATTGTGACGTGTGCGAGTGAAATTTATACTCTTCTCGAAAGAGGGTCTTCCAAAAGACGCACTGCAGAAACTTTACTTAACAAACAATCCAGTCGTTCACATTCGTTGTTTTCAATTACAATCCACATCAAAGAAGCAACCCCTGAAGGTGAAGAACTAATTAAGTGTGGTAAACTGAATTTGGTGGATCTTGCGGGTTCAGAAAATATATCTCGTTCCGGCGCTAGGGAGGGTCGTGCTAGAGAAGCTGGAGAGATTAATAAAAGTTTGCTTACATTAGGGCGAGTGATTAATGCCCTTGTGGAGCACCTTGGTCATATTCCATACAGGGATAGCAAGTTGACTCGTTTACTTCGTGATTCACTTGGGGGAAGAACCAAGACGTGCATTATAGCGACAGTATCCCCCGCTGTTCATTGCTTAGAAGAAACTTTGAGCACATTGGATTATGCACATAGGGCAAAGAACATTAAAAATAAGCCAGAGGTCAACCAAAAAATGATGAAATCAACTCTTATCAAGGATCTTTACGGTGAAATTGAACGCCTTAAGTCAGAGGTTTATGCTACTCGTGAGAAAAATGGGGTCTATATTCCAAAGGAAAGATACTATCAGGAAGAGATTGAGAAGAAGGCTATGGCTGATCAGATTGAGCAGATGGGCATCACAATTGAATCTTATCAGAAGCAACTTGAGGATATGAGAAACAAGTATGATGATCAAGTTCGTCAGTGCTCCGATTTAAGCAACAAACTTGATACCACTGAGAAAAACTTGAACAAGACTAGCAAGGTGCTTGCCAGTAGAGAGGAAGAACTAAAGAAGTGTCGATATACCGTCAATGAAAAGGAGTTCATCATATCTGAACAGAGAAAAGCAGAAAATGCCCTAGCTCATCAAGCATGTGTTTTACGAGCTGATTTAGAGAAAGCTCTTCAGGATAATGCTTCATTATTTGCGAAAATTGGTAGAGAAGATAAACTCAGCTCAGATAATAGAGCTGTAGTGAACAATTTTCAAGCGGAACTTGCCCAGAAGGTTGGTTCTCTTTGCAACACTGTTACAACATCGTTGTCTGAACAGAACGGACATCTACAAGGTGTGGAGAAGCTCTGCCATTCCTTTTTGGGAATTCATGATAAGGCGGCTATCGATTTGAAAGAGAAAATGAAAGACCTGAGGGCGGTGTATGTGTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCATAAGGCAAGCTCAGATGCATCGTTGGAGGAGTTATCATCTGCCATATCCTCCCACGGTCATTCAATTGAAGAATTCCTTACAACTGCGGCCACAGAAGCTGGCTCAATATTTGACGAGCTTCAGAGCTGTCTTTCAACACAACATGGTGAATTGACACTTTTTGCTAGGGAAGTACGCAATAGATTCAATCTTAGCGTGGAACAAATAAAGGAGATTTCTGAGCGATCGGAAGAATTAGTTGAAAAGCTTTTTGAAGAATCAAAAAATCTTGAAGAGTTTGTAGCACGGGCTGACCAAATGCAAACAGAGAGCATTGATGATTTTAAGAAAGCTTACGAGGAGCAATCAAAATCCGAGTCGGAGAAACTCATTGCTGATATGACTAGCTTGATTTCTGATCACATTCGTCGTCAAGTCCATCTTGTAGACTCAAAGCTTGTTGATCTTAGGGAGAGTGGCATAAAGAACAAGTCATTCTTCGATGGACATGTGTCATCAGTGGAAGATATTACAACCAATGCAAAAAGGAAATGGCAGTCCTTTTGCATACAAGCAGAAAAAGACGCAAAAGATACTGCTGATTACTCTGCAGCAAAGCATTGCCGTATGGAGGTACTCCTGCAGCAAAGTGTTAGTACTGCTCATTCGGCTTTTGGACAAGTGAAGAGGACACATGAGGCTGTAAATGAGTTAGGGGCCAAACATATTTTTGCGACAGAGTCACTTATCAGGAACGCTTGTGAGAGCCATGTGCAGCATGTTGCAGAGGTCAATTCTGCACGAGCAGCAGCCGAGGAAGATGTGGCAAAGAACACTGATGATTTTTTGCAGCAGTTCGATGCCACATCTGCAGAAGAACGTGAATCTGTATGTAGCGTCGTAAATGTTGTGAAAAGCCATGCAAATACACTTGAGATGTTTAGAGAGAATCACTCAGGGCAAGCTGCTTCCATTGAACACAGGGCATGTGAAACTTTTCAGCAGAATTATATGGACTATGAGCCTAGTGGTACAACACCAGTAAGATGTGAGCCTGAGGTTCCAAGTAAGGGTACAATAGACTCTCTTCGAACCTTGCCAATTGAAGCCCTTCTTGAGGAATTCCGGGAAAATAATTCATATGAATCTTCTTCTGATGTAAAGGAGTTGAAACCGTCTCTTATTCCACGTTCTCCTCTCACCCAATTGAATTAA

Protein sequence

>Msa1125990

MSGKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYSREVAVSQNIAGKHIDRVFTFDKVFGPSAQQRELYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTFTMEGECKRSKSGPNGELPPEAGVIPRAVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEEISKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTCASEIYTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKSEVYATREKNGVYIPKERYYQEEIEKKAMADQIEQMGITIESYQKQLEDMRNKYDDQVRQCSDLSNKLDTTEKNLNKTSKVLASREEELKKCRYTVNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFAKIGREDKLSSDNRAVVNNFQAELAQKVGSLCNTVTTSLSEQNGHLQGVEKLCHSFLGIHDKAAIDLKEKMKDLRAVYVSHIEAVQNVVRLHKASSDASLEELSSAISSHGHSIEEFLTTAATEAGSIFDELQSCLSTQHGELTLFAREVRNRFNLSVEQIKEISERSEELVEKLFEESKNLEEFVARADQMQTESIDDFKKAYEEQSKSESEKLIADMTSLISDHIRRQVHLVDSKLVDLRESGIKNKSFFDGHVSSVEDITTNAKRKWQSFCIQAEKDAKDTADYSAAKHCRMEVLLQQSVSTAHSAFGQVKRTHEAVNELGAKHIFATESLIRNACESHVQHVAEVNSARAAAEEDVAKNTDDFLQQFDATSAEERESVCSVVNVVKSHANTLEMFRENHSGQAASIEHRACETFQQNYMDYEPSGTTPVRCEPEVPSKGTIDSLRTLPIEALLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN*