Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334380 | XP_013464717.1 | 97.238 | 688 | 19 | 0 | 1 | 688 | 1 | 688 | 0.0 | 1379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334380 | sp|Q94AN2|CHER1_ARATH | 72.319 | 690 | 185 | 4 | 2 | 685 | 11 | 700 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045620 | Msa0334380 | 0.800483 | 1.411013e-48 | -8.615850e-47 |
| Msa0334380 | Msa0515110 | 0.817982 | 2.485813e-52 | -8.615850e-47 |
| Msa0334380 | Msa0536410 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
| Msa0334380 | Msa0576330 | 0.806949 | 6.415608e-50 | -8.615850e-47 |
| Msa0334380 | Msa0687370 | 0.824191 | 9.225455e-54 | -8.615850e-47 |
| Msa0334380 | Msa1085680 | 0.812220 | 4.730410e-51 | -8.615850e-47 |
| Msa0334380 | Msa1105580 | 0.801082 | 1.064741e-48 | -8.615850e-47 |
| Msa0334380 | Msa1188930 | 0.817977 | 2.492338e-52 | -8.615850e-47 |
| Msa0334380 | Msa1278030 | 0.821548 | 3.808612e-53 | -8.615850e-47 |
| Msa0334380 | Msa1385570 | 0.838127 | 3.458385e-57 | -8.615850e-47 |
| Msa0334380 | Msa1454410 | 0.804071 | 2.575348e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334380 | MtrunA17_Chr2g0317791 | 97.238 | 688 | 19 | 0 | 1 | 688 | 1 | 688 | 0.0 | 1379 |
| Msa0334380 | MtrunA17_Chr8g0359941 | 79.124 | 685 | 136 | 4 | 4 | 685 | 15 | 695 | 0.0 | 1137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334380 | AT3G15380.1 | 72.319 | 690 | 185 | 4 | 2 | 685 | 11 | 700 | 0.0 | 1037 |
Find 181 sgRNAs with CRISPR-Local
Find 453 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAGGAGTTTCTCATTTC+TGG | 0.112317 | 2_4:-52702087 | None:intergenic |
| GTTCTACATGTTATGGATTT+TGG | 0.116753 | 2_4:+52704909 | Msa0334380:CDS |
| TTCACCTGTTTGGTTGTTAT+TGG | 0.137699 | 2_4:+52705085 | Msa0334380:CDS |
| CTTTAAGATTTATACCTAAA+TGG | 0.140642 | 2_4:-52701016 | None:intergenic |
| GTCATATTTCCTAGTGTTAA+TGG | 0.160201 | 2_4:+52702135 | Msa0334380:CDS |
| TTCTCACTCAGCTGTCTTAA+AGG | 0.173733 | 2_4:+52702559 | Msa0334380:CDS |
| TTGTCATCTTTATTGCCTTT+TGG | 0.182798 | 2_4:+52700948 | Msa0334380:CDS |
| ATCTGTCGCCTCTTATTATT+GGG | 0.194594 | 2_4:+52705152 | Msa0334380:CDS |
| GATCTGTCGCCTCTTATTAT+TGG | 0.203692 | 2_4:+52705151 | Msa0334380:CDS |
| TCTGACAAATTGGTTGTTCT+AGG | 0.245442 | 2_4:+52707096 | Msa0334380:three_prime_UTR |
| CGCGTGAAGATTCACTTGTC+TGG | 0.248425 | 2_4:+52701980 | Msa0334380:CDS |
| ATCGAACGAAAAGGAATTTC+AGG | 0.255259 | 2_4:-52705427 | None:intergenic |
| TTCCCTTTGTATATAATATA+TGG | 0.258012 | 2_4:+52707021 | Msa0334380:three_prime_UTR |
| GCCATCCTCTTTCACCTGTT+TGG | 0.266801 | 2_4:+52705075 | Msa0334380:CDS |
| TCACCTGTTTGGTTGTTATT+GGG | 0.270892 | 2_4:+52705086 | Msa0334380:CDS |
| CCCGGCCGGAGCTGAATAAA+TGG | 0.271388 | 2_4:-52704939 | None:intergenic |
| TCAACAAAGGAGACCCATTT+AGG | 0.275666 | 2_4:+52701002 | Msa0334380:CDS |
| ACAATGTTCTACTACCTAAA+AGG | 0.276175 | 2_4:+52703058 | Msa0334380:CDS |
| TTGCAGTGTTCTACATGTTA+TGG | 0.282895 | 2_4:+52704902 | Msa0334380:CDS |
| TAAGTCTTTGCATATCATTT+TGG | 0.285338 | 2_4:-52706876 | None:intergenic |
| CTTTGTTTCTCTCTGTGATT+TGG | 0.295140 | 2_4:+52702957 | Msa0334380:CDS |
| TCCTTTGTTGAAAGCAAAAC+TGG | 0.298075 | 2_4:-52700990 | None:intergenic |
| TGGTTTATTAGGCTTACTTT+TGG | 0.316715 | 2_4:+52701793 | Msa0334380:intron |
| GATCCTTACATTCACATATA+TGG | 0.329782 | 2_4:+52703915 | Msa0334380:CDS |
| ATCAGCTATTGCAACAGATT+TGG | 0.332889 | 2_4:+52705951 | Msa0334380:CDS |
| ATGCAGGTTTGTTGGGCTCT+TGG | 0.341214 | 2_4:+52706718 | Msa0334380:intron |
| ACTATCCATATGGGTGGAAA+TGG | 0.343443 | 2_4:+52700884 | Msa0334380:CDS |
| CTTCAAAATGAGGGGTTCTT+CGG | 0.346859 | 2_4:+52700859 | Msa0334380:exon |
| TTTCTGCAGATTGCTATAAC+TGG | 0.353625 | 2_4:+52705910 | Msa0334380:intron |
| TATTGTTCGGCGCATCCTTA+TGG | 0.353828 | 2_4:+52704125 | Msa0334380:CDS |
| ATTCCGGTTCACTGATTTGA+TGG | 0.357743 | 2_4:-52705653 | None:intergenic |
| AGTGAATCTTCACGCGGAAC+AGG | 0.360197 | 2_4:-52701973 | None:intergenic |
| TTCAAAATGAGGGGTTCTTC+GGG | 0.361658 | 2_4:+52700860 | Msa0334380:exon |
| CTTCATGTCTTTCAGTTGGA+TGG | 0.371868 | 2_4:+52703853 | Msa0334380:intron |
| TTTAAGATTTATACCTAAAT+GGG | 0.373357 | 2_4:-52701015 | None:intergenic |
| CAAATGTGTCTTTAAGCCTT+TGG | 0.373843 | 2_4:+52702468 | Msa0334380:CDS |
| TTGAAGCTCTAGCAATGAAT+TGG | 0.374024 | 2_4:-52702448 | None:intergenic |
| TATGGCAACTTCTGTCCTTA+AGG | 0.379154 | 2_4:+52704143 | Msa0334380:CDS |
| ATGGGATCATAAAGCATAAC+AGG | 0.379970 | 2_4:+52700903 | Msa0334380:CDS |
| TGATCCCATTTCCACCCATA+TGG | 0.380423 | 2_4:-52700889 | None:intergenic |
| AGGATACCATATGGTATGAT+TGG | 0.381943 | 2_4:-52704880 | None:intergenic |
| ATCAATTGGAGCTCAAATAC+TGG | 0.383717 | 2_4:+52701863 | Msa0334380:CDS |
| TTCTTCGGGTACTATCCATA+TGG | 0.386685 | 2_4:+52700874 | Msa0334380:CDS |
| AGTATTGGTTCTCTAGCTCT+TGG | 0.387761 | 2_4:+52705481 | Msa0334380:CDS |
| CCAGTCATGTGCCTGACAAC+TGG | 0.392677 | 2_4:+52705575 | Msa0334380:CDS |
| GCATGCAGGCCTTCATCAAT+TGG | 0.395402 | 2_4:+52701849 | Msa0334380:CDS |
| GTAACACATAAGTCTCTTCA+TGG | 0.400123 | 2_4:-52705458 | None:intergenic |
| AGGGAAGAACTCAAACTATA+AGG | 0.406375 | 2_4:-52707004 | None:intergenic |
| AACTCCTCTCTTCAACTTCA+AGG | 0.407170 | 2_4:+52702099 | Msa0334380:CDS |
| GTCCGTTACACACCGCATAT+TGG | 0.408374 | 2_4:+52705048 | Msa0334380:CDS |
| TTTAAGCCTTTGGCAGCAGA+TGG | 0.410816 | 2_4:+52702478 | Msa0334380:CDS |
| TTACCATGATATAAGCATTC+CGG | 0.413773 | 2_4:-52705669 | None:intergenic |
| TCCATTTATTCAGCTCCGGC+CGG | 0.414225 | 2_4:+52704938 | Msa0334380:CDS |
| GAAACAACAATATCTCCTTC+AGG | 0.416166 | 2_4:-52702015 | None:intergenic |
| TTACATCAATTGCTATTGTT+CGG | 0.423458 | 2_4:+52704112 | Msa0334380:CDS |
| TTGTTGTTTCAATGGATGAT+TGG | 0.424634 | 2_4:+52702028 | Msa0334380:CDS |
| GGCTCATCAACAGTGATTGC+TGG | 0.426887 | 2_4:+52705129 | Msa0334380:CDS |
| TGCTCGCAGTATATGCTTGT+TGG | 0.427523 | 2_4:+52701945 | Msa0334380:CDS |
| GTGTAAAATGCAGGTTTGTT+GGG | 0.429531 | 2_4:+52706711 | Msa0334380:intron |
| CTTCCATATATGTGAATGTA+AGG | 0.429797 | 2_4:-52703918 | None:intergenic |
| TATAGAAAACATACCACAAC+AGG | 0.431860 | 2_4:-52706138 | None:intergenic |
| AGACTTATGTGTTACAGTAT+TGG | 0.440425 | 2_4:+52705466 | Msa0334380:CDS |
| TAACATGGGAATATTTCATC+GGG | 0.444302 | 2_4:-52706908 | None:intergenic |
| AGGAGATATTGTTGTTTCAA+TGG | 0.446951 | 2_4:+52702020 | Msa0334380:CDS |
| ATTTCGTTGCTGCAATGCCT+TGG | 0.449324 | 2_4:+52702996 | Msa0334380:CDS |
| GCCTTCCCGATCCAGTTGTC+AGG | 0.450311 | 2_4:-52705586 | None:intergenic |
| TGTGTAAAATGCAGGTTTGT+TGG | 0.452116 | 2_4:+52706710 | Msa0334380:intron |
| CCATTTATTCAGCTCCGGCC+GGG | 0.453264 | 2_4:+52704939 | Msa0334380:CDS |
| GCGTGAAGATTCACTTGTCT+GGG | 0.458171 | 2_4:+52701981 | Msa0334380:CDS |
| GGAGATGTTATATTGTTCCT+TGG | 0.458625 | 2_4:+52706015 | Msa0334380:CDS |
| TGTCTTTCAGTTGGATGGAT+AGG | 0.459269 | 2_4:+52703858 | Msa0334380:intron |
| ATGTGCCTGACAACTGGATC+GGG | 0.459928 | 2_4:+52705581 | Msa0334380:CDS |
| CCAGTTGTCAGGCACATGAC+TGG | 0.460652 | 2_4:-52705575 | None:intergenic |
| GACTGGAGACTTTCAGTTTG+CGG | 0.460819 | 2_4:-52705558 | None:intergenic |
| AAGAATAACATCCTACGGAT+TGG | 0.462361 | 2_4:+52705976 | Msa0334380:CDS |
| AACCATATATTATATACAAA+GGG | 0.469218 | 2_4:-52707023 | None:intergenic |
| ATCTCCACTCTTGCCTGTTG+TGG | 0.469830 | 2_4:+52706125 | Msa0334380:CDS |
| GTTACACAATTTCTCATAGC+AGG | 0.473826 | 2_4:+52705108 | Msa0334380:CDS |
| AACAATGATGGCAACCCAAA+AGG | 0.474038 | 2_4:-52700963 | None:intergenic |
| TGGCCTGTGTTGATCGTTTG+TGG | 0.475648 | 2_4:+52702923 | Msa0334380:CDS |
| AATAGCAATTGATGTAAGAA+TGG | 0.476234 | 2_4:-52704106 | None:intergenic |
| AAGGCATTGCAGCAACGAAA+TGG | 0.477500 | 2_4:-52702994 | None:intergenic |
| CAACCATGATAAAAGTCATA+AGG | 0.481385 | 2_4:-52704080 | None:intergenic |
| AGAATAACATCCTACGGATT+GGG | 0.481832 | 2_4:+52705977 | Msa0334380:CDS |
| TTTCTCCATTTATTCAGCTC+CGG | 0.482821 | 2_4:+52704934 | Msa0334380:CDS |
| TCTAATCAAGTTTATCAAAG+TGG | 0.482823 | 2_4:+52701892 | Msa0334380:CDS |
| ATCATGACCCCAATAATAAG+AGG | 0.483599 | 2_4:-52705160 | None:intergenic |
| GGATACCATATGGTATGATT+GGG | 0.485559 | 2_4:-52704879 | None:intergenic |
| ATTGGGCATGTCAATGTGAT+TGG | 0.488268 | 2_4:+52705994 | Msa0334380:CDS |
| CATATAACCTCATGGAAAAG+AGG | 0.493772 | 2_4:+52704995 | Msa0334380:CDS |
| AGTTTATCAAAGTGGATTGA+AGG | 0.494393 | 2_4:+52701900 | Msa0334380:CDS |
| TAACCCAATAACAACCAAAC+AGG | 0.495118 | 2_4:-52705089 | None:intergenic |
| GGACCATCAAATCAGTGAAC+CGG | 0.495664 | 2_4:+52705650 | Msa0334380:CDS |
| AACAACCAAACAGGTGAAAG+AGG | 0.496513 | 2_4:-52705080 | None:intergenic |
| TGAATGGACTTATCAATGAC+AGG | 0.497226 | 2_4:-52702524 | None:intergenic |
| CTATCCATATGGGTGGAAAT+GGG | 0.500757 | 2_4:+52700885 | Msa0334380:CDS |
| AGGATCATGCTCACCAATGA+TGG | 0.503621 | 2_4:-52703898 | None:intergenic |
| CTGTGTTGATCGTTTGTGGT+GGG | 0.508004 | 2_4:+52702927 | Msa0334380:CDS |
| AACAAGAGAGAGATGTAGAC+AGG | 0.508373 | 2_4:-52700810 | None:intergenic |
| GATGCTATAACACCCATCAT+TGG | 0.509677 | 2_4:+52703885 | Msa0334380:CDS |
| ATTGAGAGTTTCAATGAGAA+GGG | 0.509758 | 2_4:-52706851 | None:intergenic |
| AAAACTGGAGTTAACAATGA+TGG | 0.512242 | 2_4:-52700975 | None:intergenic |
| CTGCTGCTCATATAACCTCA+TGG | 0.512269 | 2_4:+52704987 | Msa0334380:CDS |
| CTCCAATATGCGGTGTGTAA+CGG | 0.517980 | 2_4:-52705050 | None:intergenic |
| CATTGAGAGTTTCAATGAGA+AGG | 0.518594 | 2_4:-52706852 | None:intergenic |
| ATTTGAGCTCCAATTGATGA+AGG | 0.519919 | 2_4:-52701858 | None:intergenic |
| TAGATACAGTCTTCAAAATG+AGG | 0.524274 | 2_4:+52700849 | Msa0334380:exon |
| TGGTTAAGAATAACATCCTA+CGG | 0.524720 | 2_4:+52705971 | Msa0334380:CDS |
| GAGGAAAAGATCGAACGAAA+AGG | 0.525477 | 2_4:-52705436 | None:intergenic |
| TAGGTTGCTGCAAAAGTGAT+AGG | 0.528922 | 2_4:+52704832 | Msa0334380:intron |
| GTGATCTGTGATCATTGTTG+TGG | 0.533821 | 2_4:+52705018 | Msa0334380:CDS |
| CATCATTCTCTCATACTGTC+AGG | 0.534176 | 2_4:+52706792 | Msa0334380:CDS |
| CAGAGATACATGGCTGACAT+AGG | 0.535311 | 2_4:+52702893 | Msa0334380:intron |
| TGCTGCAATGCCTTGGATAA+CGG | 0.535787 | 2_4:+52703003 | Msa0334380:CDS |
| ATAACATGGGAATATTTCAT+CGG | 0.535854 | 2_4:-52706909 | None:intergenic |
| GAACCGGAATGCTTATATCA+TGG | 0.540249 | 2_4:+52705666 | Msa0334380:CDS |
| AACACTGCAAGGATACCATA+TGG | 0.542211 | 2_4:-52704889 | None:intergenic |
| TAAGGACAGAAGTTGCCATA+AGG | 0.544009 | 2_4:-52704140 | None:intergenic |
| GTCATTCTGAACAACCCGGC+CGG | 0.546462 | 2_4:-52704953 | None:intergenic |
| TTAAGCCTTTGGCAGCAGAT+GGG | 0.546941 | 2_4:+52702479 | Msa0334380:CDS |
| AGAGACAGAAGTGGTGTGAA+AGG | 0.547142 | 2_4:-52700777 | None:intergenic |
| AGAATTGATATACTTGTGAA+TGG | 0.547515 | 2_4:-52702540 | None:intergenic |
| CATACCACAACAGGCAAGAG+TGG | 0.553297 | 2_4:-52706129 | None:intergenic |
| AAACCATATATTATATACAA+AGG | 0.554450 | 2_4:-52707024 | None:intergenic |
| AGCCTTTGGCAGCAGATGGG+TGG | 0.556537 | 2_4:+52702482 | Msa0334380:CDS |
| AATCTATTTACAGAGATACA+TGG | 0.560146 | 2_4:+52702883 | Msa0334380:intron |
| TGATCTGTGATCATTGTTGT+GGG | 0.560312 | 2_4:+52705019 | Msa0334380:CDS |
| CCATTGAGAAAACAATAACA+TGG | 0.561968 | 2_4:-52706923 | None:intergenic |
| TCTTCGGGTACTATCCATAT+GGG | 0.562313 | 2_4:+52700875 | Msa0334380:CDS |
| AGAGTTTCAATGAGAAGGGG+AGG | 0.562319 | 2_4:-52706847 | None:intergenic |
| AGTTTCTCATTTCTGGTGTG+AGG | 0.565020 | 2_4:-52702080 | None:intergenic |
| CTCCACCCATCTGCTGCCAA+AGG | 0.570395 | 2_4:-52702484 | None:intergenic |
| TGTCAGGATTCTGACGAGCA+TGG | 0.570944 | 2_4:+52706808 | Msa0334380:CDS |
| AGATACAGTCTTCAAAATGA+GGG | 0.575665 | 2_4:+52700850 | Msa0334380:exon |
| TATATGAGCAGCAGTTAGAG+TGG | 0.582084 | 2_4:-52704978 | None:intergenic |
| AATAAAACCACCGTTATCCA+AGG | 0.582647 | 2_4:-52703013 | None:intergenic |
| CTTACATTCACATATATGGA+AGG | 0.582819 | 2_4:+52703919 | Msa0334380:CDS |
| GGATCATGCTCACCAATGAT+GGG | 0.585240 | 2_4:-52703897 | None:intergenic |
| GTCAGGATTCTGACGAGCAT+GGG | 0.587543 | 2_4:+52706809 | Msa0334380:CDS |
| ATATAACCTCATGGAAAAGA+GGG | 0.587592 | 2_4:+52704996 | Msa0334380:CDS |
| CATGTGCCTGACAACTGGAT+CGG | 0.591232 | 2_4:+52705580 | Msa0334380:CDS |
| GACTACAAAGGAAATGTGTG+TGG | 0.591493 | 2_4:+52701820 | Msa0334380:CDS |
| TTAAAATCCTTCTCAAAACT+CGG | 0.592193 | 2_4:+52707179 | Msa0334380:three_prime_UTR |
| ACCAAACAGGTGAAAGAGGA+TGG | 0.592919 | 2_4:-52705076 | None:intergenic |
| TTGGGGTCATGATGAAGCAT+CGG | 0.601645 | 2_4:+52705170 | Msa0334380:CDS |
| TGGGTTTGTGATTATCCTGA+AGG | 0.603089 | 2_4:+52702000 | Msa0334380:CDS |
| CAAATCACAGAGAGAAACAA+AGG | 0.607234 | 2_4:-52702956 | None:intergenic |
| GTGAATCTTCACGCGGAACA+GGG | 0.608187 | 2_4:-52701972 | None:intergenic |
| CCTGTGTTGATCGTTTGTGG+TGG | 0.608362 | 2_4:+52702926 | Msa0334380:CDS |
| GTGTGTGGGGACAAGCATGC+AGG | 0.612803 | 2_4:+52701835 | Msa0334380:CDS |
| CATTGACATGCCCAATCCGT+AGG | 0.613058 | 2_4:-52705987 | None:intergenic |
| TTGAGAGTTTCAATGAGAAG+GGG | 0.621535 | 2_4:-52706850 | None:intergenic |
| GGATAGTCAGTTGAAACTTG+CGG | 0.621722 | 2_4:+52701921 | Msa0334380:CDS |
| ACTACAAAGGAAATGTGTGT+GGG | 0.628516 | 2_4:+52701821 | Msa0334380:CDS |
| TTACATTCACATATATGGAA+GGG | 0.631269 | 2_4:+52703920 | Msa0334380:CDS |
| TCGGGTACTATCCATATGGG+TGG | 0.634463 | 2_4:+52700878 | Msa0334380:CDS |
| CATTGAGAAAACAATAACAT+GGG | 0.637708 | 2_4:-52706922 | None:intergenic |
| ATTATCTCACCATTAACACT+AGG | 0.639078 | 2_4:-52702144 | None:intergenic |
| GAAGAACTCAAACTATAAGG+TGG | 0.641226 | 2_4:-52707001 | None:intergenic |
| GGAAATATGACAGGATAACA+AGG | 0.643638 | 2_4:-52702123 | None:intergenic |
| TTAACACTAGGAAATATGAC+AGG | 0.644351 | 2_4:-52702132 | None:intergenic |
| ATACATGGCTGACATAGGAA+AGG | 0.648575 | 2_4:+52702898 | Msa0334380:CDS |
| CTGACAGTATGAGAGAATGA+TGG | 0.648779 | 2_4:-52706791 | None:intergenic |
| TGCAATGCCTTGGATAACGG+TGG | 0.651035 | 2_4:+52703006 | Msa0334380:CDS |
| ATAACATGTAGAACACTGCA+AGG | 0.651424 | 2_4:-52704900 | None:intergenic |
| AGGTCCTTGAAGTTGAAGAG+AGG | 0.651499 | 2_4:-52702103 | None:intergenic |
| TCTGTCGCCTCTTATTATTG+GGG | 0.654026 | 2_4:+52705153 | Msa0334380:CDS |
| AGAACAACAAGAGACAGAAG+TGG | 0.656657 | 2_4:-52700786 | None:intergenic |
| GGCAGTCATTCTGAACAACC+CGG | 0.660821 | 2_4:-52704957 | None:intergenic |
| GCATTGCAGCAACGAAATGG+CGG | 0.662646 | 2_4:-52702991 | None:intergenic |
| GCCTGACAACTGGATCGGGA+AGG | 0.663993 | 2_4:+52705585 | Msa0334380:CDS |
| CCACCACAAACGATCAACAC+AGG | 0.667874 | 2_4:-52702926 | None:intergenic |
| GATACAGTCTTCAAAATGAG+GGG | 0.674233 | 2_4:+52700851 | Msa0334380:exon |
| GAATGGACTTATCAATGACA+GGG | 0.677790 | 2_4:-52702523 | None:intergenic |
| TGGCTGACATAGGAAAGGCA+TGG | 0.696862 | 2_4:+52702903 | Msa0334380:CDS |
| CTACAAAGGAAATGTGTGTG+GGG | 0.698776 | 2_4:+52701822 | Msa0334380:CDS |
| AGGATGGCAACTCCAATATG+CGG | 0.707650 | 2_4:-52705060 | None:intergenic |
| ACACATAAGTCTCTTCATGG+AGG | 0.723284 | 2_4:-52705455 | None:intergenic |
| CAGACAAGTGAATCTTCACG+CGG | 0.725966 | 2_4:-52701979 | None:intergenic |
| AACATGGGAATATTTCATCG+GGG | 0.736434 | 2_4:-52706907 | None:intergenic |
| ACTTGTGAGTGTCTAACATG+AGG | 0.749930 | 2_4:-52706077 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTAAATTTAAATAAATAA+AGG | + | chr2_4:52703385-52703404 | Msa0334380:intron | 10.0% |
| !!! | CTAATATTTAATATTTTTCT+AGG | - | chr2_4:52703687-52703706 | None:intergenic | 10.0% |
| !!! | ATTGATATTTTTCAATTTAA+GGG | - | chr2_4:52704350-52704369 | None:intergenic | 10.0% |
| !!! | AATTGATATTTTTCAATTTA+AGG | - | chr2_4:52704351-52704370 | None:intergenic | 10.0% |
| !!! | ATTGATATTCTTTAATTTAA+AGG | + | chr2_4:52704502-52704521 | Msa0334380:intron | 10.0% |
| !!! | TTTAAGATTTATACCTAAAT+GGG | - | chr2_4:52701018-52701037 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTAACATTCAAC+TGG | + | chr2_4:52702595-52702614 | Msa0334380:intron | 15.0% |
| !! | TAAACTATACAATAATTACA+AGG | + | chr2_4:52703449-52703468 | Msa0334380:intron | 15.0% |
| !!! | AATGTTCATAAATTTTCTAA+TGG | - | chr2_4:52703544-52703563 | None:intergenic | 15.0% |
| !!! | ATAATATGTATGTCTTTTAT+TGG | + | chr2_4:52704430-52704449 | Msa0334380:intron | 15.0% |
| !!! | TTACTAAAGACATTTTTTTA+TGG | + | chr2_4:52704466-52704485 | Msa0334380:intron | 15.0% |
| !! | TTTGAAAAAAATATTTGTCT+GGG | + | chr2_4:52704603-52704622 | Msa0334380:intron | 15.0% |
| !!! | TTTTAATACTCATAGATAAT+TGG | - | chr2_4:52705330-52705349 | None:intergenic | 15.0% |
| !! | AACCATATATTATATACAAA+GGG | - | chr2_4:52707026-52707045 | None:intergenic | 15.0% |
| !! | AAACCATATATTATATACAA+AGG | - | chr2_4:52707027-52707046 | None:intergenic | 15.0% |
| !!! | CTTTAAGATTTATACCTAAA+TGG | - | chr2_4:52701019-52701038 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTCTGTTTCTTAT+TGG | + | chr2_4:52701078-52701097 | Msa0334380:intron | 20.0% |
| !!! | TTTAGTTTCTGTTTCTTATT+GGG | + | chr2_4:52701079-52701098 | Msa0334380:intron | 20.0% |
| !! | ATGTACTGTAAAATTATTAG+AGG | - | chr2_4:52701152-52701171 | None:intergenic | 20.0% |
| !! | TTACATTGTGTTTATAAGTA+GGG | + | chr2_4:52701283-52701302 | Msa0334380:intron | 20.0% |
| !!! | TTTATTCTTCCTTTTTGTTA+TGG | + | chr2_4:52701743-52701762 | Msa0334380:intron | 20.0% |
| !! | ATTTGTAAAAACTGATACTA+TGG | + | chr2_4:52701773-52701792 | Msa0334380:intron | 20.0% |
| !!! | TATCCTTTCGATAATTTTTT+TGG | + | chr2_4:52702316-52702335 | Msa0334380:intron | 20.0% |
| !! | TATCCAAAAAAATTATCGAA+AGG | - | chr2_4:52702322-52702341 | None:intergenic | 20.0% |
| !! | AACAACATATAATACACATA+AGG | - | chr2_4:52702838-52702857 | None:intergenic | 20.0% |
| !!! | TACCAAATATTTGTTTCTTA+AGG | + | chr2_4:52703108-52703127 | Msa0334380:intron | 20.0% |
| !! | TTCCTTAAGAAACAAATATT+TGG | - | chr2_4:52703113-52703132 | None:intergenic | 20.0% |
| !! | ATGGTGATATAAAAATAAGT+AGG | - | chr2_4:52703220-52703239 | None:intergenic | 20.0% |
| !!! | TTATTTTTATATCACCATGT+TGG | + | chr2_4:52703222-52703241 | Msa0334380:intron | 20.0% |
| !! | GCATATCTTATAATGTAAAT+AGG | - | chr2_4:52703421-52703440 | None:intergenic | 20.0% |
| !! | TATTGTATAGTTTACTTCAT+AGG | - | chr2_4:52703443-52703462 | None:intergenic | 20.0% |
| !!! | ACACAAAAAGTATTTATTTC+TGG | + | chr2_4:52703655-52703674 | Msa0334380:intron | 20.0% |
| !! | TAAATCTTACAAACAGATTT+CGG | + | chr2_4:52704022-52704041 | Msa0334380:intron | 20.0% |
| !!! | ATTGTTATTTCGAAAATATG+AGG | - | chr2_4:52704322-52704341 | None:intergenic | 20.0% |
| !!! | CTTTGAAAAAAATATTTGTC+TGG | + | chr2_4:52704602-52704621 | Msa0334380:intron | 20.0% |
| !! | TTGAAAAAAATATTTGTCTG+GGG | + | chr2_4:52704604-52704623 | Msa0334380:intron | 20.0% |
| !!! | ATATTTTTACGATAATTCCA+AGG | + | chr2_4:52705244-52705263 | Msa0334380:intron | 20.0% |
| !! | AACAATTTATAAACCAACAT+TGG | - | chr2_4:52705287-52705306 | None:intergenic | 20.0% |
| !! | GGTTTATAAATTGTTGAAAA+AGG | + | chr2_4:52705292-52705311 | Msa0334380:intron | 20.0% |
| !! | AGATAAATTTGTAACTATCA+TGG | - | chr2_4:52705366-52705385 | None:intergenic | 20.0% |
| !!! | TATATATGTGCTTATTGTTT+TGG | + | chr2_4:52705745-52705764 | Msa0334380:intron | 20.0% |
| !! | TTCTAACATAATACTTCTTT+AGG | - | chr2_4:52705805-52705824 | None:intergenic | 20.0% |
| !! | TTTAACCATATCATAAAACA+TGG | + | chr2_4:52706201-52706220 | Msa0334380:intron | 20.0% |
| !!! | AATTACCATGTTTTATGATA+TGG | - | chr2_4:52706209-52706228 | None:intergenic | 20.0% |
| !!! | TTTTATTATATGAAATCCAG+AGG | + | chr2_4:52706273-52706292 | Msa0334380:intron | 20.0% |
| !!! | GTTTAAAACTTTGCTTAAAT+AGG | - | chr2_4:52706589-52706608 | None:intergenic | 20.0% |
| !! | TGATAATTGTTTGCAATAAA+GGG | - | chr2_4:52706668-52706687 | None:intergenic | 20.0% |
| !! | ATATATATTGTGTAAAATGC+AGG | + | chr2_4:52706702-52706721 | Msa0334380:intron | 20.0% |
| !! | TTCCCTTTGTATATAATATA+TGG | + | chr2_4:52707021-52707040 | Msa0334380:three_prime_UTR | 20.0% |
| !!! | TATGTATTTTTCTGACAAAT+TGG | + | chr2_4:52707086-52707105 | Msa0334380:three_prime_UTR | 20.0% |
| !! | TAGGATATATATCATGTTAT+GGG | + | chr2_4:52707115-52707134 | Msa0334380:intron | 20.0% |
| ! | AAGAAACAGAAACTAAAACT+TGG | - | chr2_4:52701076-52701095 | None:intergenic | 25.0% |
| !! | TTCTTATTGGGTTTCTTTTA+TGG | + | chr2_4:52701091-52701110 | Msa0334380:intron | 25.0% |
| !!! | TCTTTTATGGTGTTTTGTTT+TGG | + | chr2_4:52701104-52701123 | Msa0334380:intron | 25.0% |
| ! | TTTACAGTACATGATTCAAT+TGG | + | chr2_4:52701160-52701179 | Msa0334380:intron | 25.0% |
| !!! | CAATGTTTTAAAAATCGATC+CGG | - | chr2_4:52701195-52701214 | None:intergenic | 25.0% |
| ! | CTACTTATAAACACAATGTA+AGG | - | chr2_4:52701284-52701303 | None:intergenic | 25.0% |
| ! | CTTACATTGTGTTTATAAGT+AGG | + | chr2_4:52701282-52701301 | Msa0334380:intron | 25.0% |
| ! | TGACAATGTATTTATAAGTG+CGG | + | chr2_4:52701356-52701375 | Msa0334380:intron | 25.0% |
| ! | ATTACACAACCATAACAAAA+AGG | - | chr2_4:52701755-52701774 | None:intergenic | 25.0% |
| ! | AACTGATACTATGGTTTATT+AGG | + | chr2_4:52701782-52701801 | Msa0334380:intron | 25.0% |
| ! | TCTAATCAAGTTTATCAAAG+TGG | + | chr2_4:52701892-52701911 | Msa0334380:CDS | 25.0% |
| ! | CATCTATGAATGCATTAAAA+TGG | - | chr2_4:52702174-52702193 | None:intergenic | 25.0% |
| !! | ATTACTTTGATTTCTGATTC+TGG | + | chr2_4:52702239-52702258 | Msa0334380:intron | 25.0% |
| !!! | TTTTTTGGATATGCATATGT+CGG | + | chr2_4:52702331-52702350 | Msa0334380:intron | 25.0% |
| ! | AGAATTGATATACTTGTGAA+TGG | - | chr2_4:52702543-52702562 | None:intergenic | 25.0% |
| ! | TTAAATTAGTGTATTCTTCG+TGG | + | chr2_4:52702626-52702645 | Msa0334380:intron | 25.0% |
| ! | GTTACAAAAAAATGTGAACT+TGG | - | chr2_4:52702774-52702793 | None:intergenic | 25.0% |
| ! | ATAATACACATAAGGCTTAA+TGG | - | chr2_4:52702830-52702849 | None:intergenic | 25.0% |
| ! | AATCTATTTACAGAGATACA+TGG | + | chr2_4:52702883-52702902 | Msa0334380:intron | 25.0% |
| ! | TGAATTAGAGAAAAAGAGAA+AGG | + | chr2_4:52703295-52703314 | Msa0334380:intron | 25.0% |
| ! | CAAAATGCATAGAAGAATAA+GGG | - | chr2_4:52703625-52703644 | None:intergenic | 25.0% |
| !! | CTTATTCTTCTATGCATTTT+GGG | + | chr2_4:52703624-52703643 | Msa0334380:intron | 25.0% |
| ! | TATATTCGTCATAAACATTC+AGG | - | chr2_4:52703713-52703732 | None:intergenic | 25.0% |
| ! | TTACATTCACATATATGGAA+GGG | + | chr2_4:52703920-52703939 | Msa0334380:CDS | 25.0% |
| ! | GAATGAGTATATACTAACTT+GGG | - | chr2_4:52703960-52703979 | None:intergenic | 25.0% |
| ! | AGAATGAGTATATACTAACT+TGG | - | chr2_4:52703961-52703980 | None:intergenic | 25.0% |
| !! | TATCCTTATGACTTTTATCA+TGG | + | chr2_4:52704077-52704096 | Msa0334380:CDS | 25.0% |
| ! | AATAGCAATTGATGTAAGAA+TGG | - | chr2_4:52704109-52704128 | None:intergenic | 25.0% |
| !! | TTACATCAATTGCTATTGTT+CGG | + | chr2_4:52704112-52704131 | Msa0334380:CDS | 25.0% |
| !!! | TAAGTTTGCTGATTGATATT+TGG | + | chr2_4:52704217-52704236 | Msa0334380:intron | 25.0% |
| !!! | ATGTCTTTTATTGGTTTTGA+TGG | + | chr2_4:52704439-52704458 | Msa0334380:intron | 25.0% |
| !!! | CTAAAGACATTTTTTTATGG+AGG | + | chr2_4:52704469-52704488 | Msa0334380:intron | 25.0% |
| !!! | TTTGCTATTTCGTAAATTTG+AGG | + | chr2_4:52704530-52704549 | Msa0334380:intron | 25.0% |
| !!! | TTGCTATTTCGTAAATTTGA+GGG | + | chr2_4:52704531-52704550 | Msa0334380:intron | 25.0% |
| ! | AATCAATCAGATTGATTGAA+TGG | - | chr2_4:52704793-52704812 | None:intergenic | 25.0% |
| ! | TGCATTATGCATTTCATATA+CGG | - | chr2_4:52705215-52705234 | None:intergenic | 25.0% |
| ! | TTAGAAAAAAATGAGACGAT+TGG | - | chr2_4:52705618-52705637 | None:intergenic | 25.0% |
| !!! | AATCGTCTCATTTTTTTCTA+AGG | + | chr2_4:52705617-52705636 | Msa0334380:CDS | 25.0% |
| ! | ATGCACACATAAATGATAAA+TGG | - | chr2_4:52705717-52705736 | None:intergenic | 25.0% |
| ! | TAATCTAATTGAAAGAGTAG+TGG | + | chr2_4:52706161-52706180 | Msa0334380:intron | 25.0% |
| ! | AATTTCAATTATCATCTAGC+TGG | + | chr2_4:52706225-52706244 | Msa0334380:intron | 25.0% |
| !! | AGGTTTTTATTCCAAACAAA+TGG | + | chr2_4:52706293-52706312 | Msa0334380:intron | 25.0% |
| ! | TATTATGAGTACTAAGTGTT+GGG | - | chr2_4:52706513-52706532 | None:intergenic | 25.0% |
| ! | TTATTATGAGTACTAAGTGT+TGG | - | chr2_4:52706514-52706533 | None:intergenic | 25.0% |
| ! | CTGATAATTGTTTGCAATAA+AGG | - | chr2_4:52706669-52706688 | None:intergenic | 25.0% |
| !! | ATTGTTGTAACTCTTTTCTT+TGG | + | chr2_4:52706745-52706764 | Msa0334380:CDS | 25.0% |
| !! | TAAGTCTTTGCATATCATTT+TGG | - | chr2_4:52706879-52706898 | None:intergenic | 25.0% |
| ! | ATAACATGGGAATATTTCAT+CGG | - | chr2_4:52706912-52706931 | None:intergenic | 25.0% |
| ! | CATTGAGAAAACAATAACAT+GGG | - | chr2_4:52706925-52706944 | None:intergenic | 25.0% |
| ! | CTAGGATATATATCATGTTA+TGG | + | chr2_4:52707114-52707133 | Msa0334380:intron | 25.0% |
| ! | TTAAAATCCTTCTCAAAACT+CGG | + | chr2_4:52707179-52707198 | Msa0334380:three_prime_UTR | 25.0% |
| TAGATACAGTCTTCAAAATG+AGG | + | chr2_4:52700849-52700868 | Msa0334380:exon | 30.0% | |
| AGATACAGTCTTCAAAATGA+GGG | + | chr2_4:52700850-52700869 | Msa0334380:exon | 30.0% | |
| ! | TTGTCATCTTTATTGCCTTT+TGG | + | chr2_4:52700948-52700967 | Msa0334380:CDS | 30.0% |
| ! | TGTCATCTTTATTGCCTTTT+GGG | + | chr2_4:52700949-52700968 | Msa0334380:CDS | 30.0% |
| AAAACTGGAGTTAACAATGA+TGG | - | chr2_4:52700978-52700997 | None:intergenic | 30.0% | |
| !!! | TTGTTTTGGAAACTTTGCAA+TGG | + | chr2_4:52701118-52701137 | Msa0334380:intron | 30.0% |
| TTAAAGAGTCTCACATTGAA+TGG | + | chr2_4:52701251-52701270 | Msa0334380:intron | 30.0% | |
| TAAAGAGTCTCACATTGAAT+GGG | + | chr2_4:52701252-52701271 | Msa0334380:intron | 30.0% | |
| GCACTTATAAATACATTGTC+AGG | - | chr2_4:52701357-52701376 | None:intergenic | 30.0% | |
| CTGATACCATCTTAGAATTT+GGG | - | chr2_4:52701430-52701449 | None:intergenic | 30.0% | |
| TCTGATACCATCTTAGAATT+TGG | - | chr2_4:52701431-52701450 | None:intergenic | 30.0% | |
| ! | TACATGGGTTAATAACTGAA+CGG | + | chr2_4:52701550-52701569 | Msa0334380:intron | 30.0% |
| ! | TAACTATTAGAATTCGGGTT+GGG | - | chr2_4:52701618-52701637 | None:intergenic | 30.0% |
| CTCAGTAACTATTAGAATTC+GGG | - | chr2_4:52701623-52701642 | None:intergenic | 30.0% | |
| CCTCAGTAACTATTAGAATT+CGG | - | chr2_4:52701624-52701643 | None:intergenic | 30.0% | |
| !!! | CTCTAATATTGTTGCTTTTG+TGG | + | chr2_4:52701651-52701670 | Msa0334380:intron | 30.0% |
| ! | TGGTTTATTAGGCTTACTTT+TGG | + | chr2_4:52701793-52701812 | Msa0334380:intron | 30.0% |
| !! | GGTTTATTAGGCTTACTTTT+GGG | + | chr2_4:52701794-52701813 | Msa0334380:intron | 30.0% |
| !! | AGTTTATCAAAGTGGATTGA+AGG | + | chr2_4:52701900-52701919 | Msa0334380:CDS | 30.0% |
| !! | AGGAGATATTGTTGTTTCAA+TGG | + | chr2_4:52702020-52702039 | Msa0334380:CDS | 30.0% |
| !! | TTGTTGTTTCAATGGATGAT+TGG | + | chr2_4:52702028-52702047 | Msa0334380:CDS | 30.0% |
| TTAACACTAGGAAATATGAC+AGG | - | chr2_4:52702135-52702154 | None:intergenic | 30.0% | |
| GTCATATTTCCTAGTGTTAA+TGG | + | chr2_4:52702135-52702154 | Msa0334380:CDS | 30.0% | |
| ATTATCTCACCATTAACACT+AGG | - | chr2_4:52702147-52702166 | None:intergenic | 30.0% | |
| TGTATTTCAAACCATAGTGA+AGG | - | chr2_4:52702385-52702404 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTTGTGTAGTTCAC+TGG | + | chr2_4:52702420-52702439 | Msa0334380:intron | 30.0% |
| TAGAAAGGATGAGTAAAAAC+AGG | - | chr2_4:52702736-52702755 | None:intergenic | 30.0% | |
| TAAGAGTGAAAATGCTAGAA+AGG | - | chr2_4:52702751-52702770 | None:intergenic | 30.0% | |
| ACAATGTTCTACTACCTAAA+AGG | + | chr2_4:52703058-52703077 | Msa0334380:CDS | 30.0% | |
| TTCAACAGTATATATCAGAG+AGG | - | chr2_4:52703279-52703298 | None:intergenic | 30.0% | |
| ! | CAACGGAGTTCATTTTATAT+AGG | + | chr2_4:52703348-52703367 | Msa0334380:intron | 30.0% |
| CCAAAATGCATAGAAGAATA+AGG | - | chr2_4:52703626-52703645 | None:intergenic | 30.0% | |
| ! | CCTTATTCTTCTATGCATTT+TGG | + | chr2_4:52703623-52703642 | Msa0334380:intron | 30.0% |
| GTTATATACGCAAGTACAAT+AGG | - | chr2_4:52703750-52703769 | None:intergenic | 30.0% | |
| GATCCTTACATTCACATATA+TGG | + | chr2_4:52703915-52703934 | Msa0334380:CDS | 30.0% | |
| CTTCCATATATGTGAATGTA+AGG | - | chr2_4:52703921-52703940 | None:intergenic | 30.0% | |
| CTTACATTCACATATATGGA+AGG | + | chr2_4:52703919-52703938 | Msa0334380:CDS | 30.0% | |
| CAACCATGATAAAAGTCATA+AGG | - | chr2_4:52704083-52704102 | None:intergenic | 30.0% | |
| TCAAAACTATGGTTGGAAAA+AGG | - | chr2_4:52704382-52704401 | None:intergenic | 30.0% | |
| !!! | TTTTCCAACCATAGTTTTGA+AGG | + | chr2_4:52704382-52704401 | Msa0334380:intron | 30.0% |
| AAAACCTTCAAAACTATGGT+TGG | - | chr2_4:52704389-52704408 | None:intergenic | 30.0% | |
| GCATAAAACCTTCAAAACTA+TGG | - | chr2_4:52704393-52704412 | None:intergenic | 30.0% | |
| AGATTGATTGAATGGTACAA+TGG | - | chr2_4:52704785-52704804 | None:intergenic | 30.0% | |
| ! | CAATCTGATTGATTCTAATG+CGG | + | chr2_4:52704799-52704818 | Msa0334380:intron | 30.0% |
| ! | GTTCTACATGTTATGGATTT+TGG | + | chr2_4:52704909-52704928 | Msa0334380:CDS | 30.0% |
| ATATAACCTCATGGAAAAGA+GGG | + | chr2_4:52704996-52705015 | Msa0334380:CDS | 30.0% | |
| TTTACGATAATTCCAAGGAT+TGG | + | chr2_4:52705249-52705268 | Msa0334380:intron | 30.0% | |
| AGACTTATGTGTTACAGTAT+TGG | + | chr2_4:52705466-52705485 | Msa0334380:CDS | 30.0% | |
| !!! | TTTTTCTAAGGTGTATTGAG+TGG | + | chr2_4:52705629-52705648 | Msa0334380:CDS | 30.0% |
| TTACCATGATATAAGCATTC+CGG | - | chr2_4:52705672-52705691 | None:intergenic | 30.0% | |
| CATGGTAAACTTTGTTAGTA+TGG | + | chr2_4:52705684-52705703 | Msa0334380:intron | 30.0% | |
| GTGCAATCATTCATCAAATA+AGG | + | chr2_4:52705767-52705786 | Msa0334380:intron | 30.0% | |
| AATGCATTCTACATTTCACT+AGG | + | chr2_4:52705845-52705864 | Msa0334380:intron | 30.0% | |
| TTCACTAGGTATATGATTTC+TGG | + | chr2_4:52705859-52705878 | Msa0334380:intron | 30.0% | |
| TGGTTAAGAATAACATCCTA+CGG | + | chr2_4:52705971-52705990 | Msa0334380:CDS | 30.0% | |
| TATAGAAAACATACCACAAC+AGG | - | chr2_4:52706141-52706160 | None:intergenic | 30.0% | |
| ! | TTGTTTGGAATAAAAACCTC+TGG | - | chr2_4:52706292-52706311 | None:intergenic | 30.0% |
| AAACGTTGGATATATAAGAG+AGG | + | chr2_4:52706376-52706395 | Msa0334380:intron | 30.0% | |
| AACGTTGGATATATAAGAGA+GGG | + | chr2_4:52706377-52706396 | Msa0334380:intron | 30.0% | |
| !!! | TGATGCCTTAAGGTTTTTTT+AGG | + | chr2_4:52706411-52706430 | Msa0334380:intron | 30.0% |
| ! | ATTATGAGTACTAAGTGTTG+GGG | - | chr2_4:52706512-52706531 | None:intergenic | 30.0% |
| CAATTATCAGAATCTCACAT+TGG | + | chr2_4:52706679-52706698 | Msa0334380:intron | 30.0% | |
| ATTGAGAGTTTCAATGAGAA+GGG | - | chr2_4:52706854-52706873 | None:intergenic | 30.0% | |
| TAACATGGGAATATTTCATC+GGG | - | chr2_4:52706911-52706930 | None:intergenic | 30.0% | |
| CCATTGAGAAAACAATAACA+TGG | - | chr2_4:52706926-52706945 | None:intergenic | 30.0% | |
| ! | CCATGTTATTGTTTTCTCAA+TGG | + | chr2_4:52706923-52706942 | Msa0334380:three_prime_UTR | 30.0% |
| !!! | TAGATTTTTTACAGCACTTC+AGG | + | chr2_4:52706946-52706965 | Msa0334380:three_prime_UTR | 30.0% |
| ATATATATCATGTTATGGGC+AGG | + | chr2_4:52707119-52707138 | Msa0334380:intron | 30.0% | |
| GATACAGTCTTCAAAATGAG+GGG | + | chr2_4:52700851-52700870 | Msa0334380:exon | 35.0% | |
| ATGGGATCATAAAGCATAAC+AGG | + | chr2_4:52700903-52700922 | Msa0334380:CDS | 35.0% | |
| ! | TCCAGTTTTGCTTTCAACAA+AGG | + | chr2_4:52700989-52701008 | Msa0334380:CDS | 35.0% |
| TCCTTTGTTGAAAGCAAAAC+TGG | - | chr2_4:52700993-52701012 | None:intergenic | 35.0% | |
| !! | TTTTGGAAACTTTGCAATGG+AGG | + | chr2_4:52701121-52701140 | Msa0334380:intron | 35.0% |
| !!! | GTTTTAAAAATCGATCCGGA+CGG | - | chr2_4:52701191-52701210 | None:intergenic | 35.0% |
| ACATTCTTCACATTACAAGC+AGG | + | chr2_4:52701306-52701325 | Msa0334380:intron | 35.0% | |
| TTCTCACATTGGATGAGATA+TGG | + | chr2_4:52701331-52701350 | Msa0334380:intron | 35.0% | |
| ! | ACTCAACCCAAATTCTAAGA+TGG | + | chr2_4:52701421-52701440 | Msa0334380:intron | 35.0% |
| TCAGTTATTAACCCATGTAC+AGG | - | chr2_4:52701549-52701568 | None:intergenic | 35.0% | |
| CTAACTCAACCTTACAAAAC+CGG | - | chr2_4:52701594-52701613 | None:intergenic | 35.0% | |
| GTAACTATTAGAATTCGGGT+TGG | - | chr2_4:52701619-52701638 | None:intergenic | 35.0% | |
| CCGAATTCTAATAGTTACTG+AGG | + | chr2_4:52701621-52701640 | Msa0334380:intron | 35.0% | |
| AAAGTGTGGAAGTTAGAAGT+GGG | + | chr2_4:52701688-52701707 | Msa0334380:intron | 35.0% | |
| ACTACAAAGGAAATGTGTGT+GGG | + | chr2_4:52701821-52701840 | Msa0334380:CDS | 35.0% | |
| ATTTGAGCTCCAATTGATGA+AGG | - | chr2_4:52701861-52701880 | None:intergenic | 35.0% | |
| ATCAATTGGAGCTCAAATAC+TGG | + | chr2_4:52701863-52701882 | Msa0334380:CDS | 35.0% | |
| GAAACAACAATATCTCCTTC+AGG | - | chr2_4:52702018-52702037 | None:intergenic | 35.0% | |
| GGAAATATGACAGGATAACA+AGG | - | chr2_4:52702126-52702145 | None:intergenic | 35.0% | |
| ATGCTTATGATTGTGTCGTA+TGG | + | chr2_4:52702212-52702231 | Msa0334380:intron | 35.0% | |
| ! | TGGTATTTTCTCCTTCACTA+TGG | + | chr2_4:52702371-52702390 | Msa0334380:intron | 35.0% |
| ! | TTGAAGCTCTAGCAATGAAT+TGG | - | chr2_4:52702451-52702470 | None:intergenic | 35.0% |
| CAAATGTGTCTTTAAGCCTT+TGG | + | chr2_4:52702468-52702487 | Msa0334380:CDS | 35.0% | |
| ! | GAATGGACTTATCAATGACA+GGG | - | chr2_4:52702526-52702545 | None:intergenic | 35.0% |
| ! | TGAATGGACTTATCAATGAC+AGG | - | chr2_4:52702527-52702546 | None:intergenic | 35.0% |
| AATTAGTGTATTCTTCGTGG+TGG | + | chr2_4:52702629-52702648 | Msa0334380:intron | 35.0% | |
| GATGCTTGCAAATGTACATT+TGG | + | chr2_4:52702691-52702710 | Msa0334380:intron | 35.0% | |
| CAAATCACAGAGAGAAACAA+AGG | - | chr2_4:52702959-52702978 | None:intergenic | 35.0% | |
| ! | CTTTGTTTCTCTCTGTGATT+TGG | + | chr2_4:52702957-52702976 | Msa0334380:CDS | 35.0% |
| AATAAAACCACCGTTATCCA+AGG | - | chr2_4:52703016-52703035 | None:intergenic | 35.0% | |
| TACCTAAAAGGTTAGAATCC+TGG | + | chr2_4:52703070-52703089 | Msa0334380:intron | 35.0% | |
| GGAAGTTTCAATTTCAGAAG+AGG | + | chr2_4:52703129-52703148 | Msa0334380:intron | 35.0% | |
| ATGCAGCTGAGAATTAAGAA+AGG | - | chr2_4:52703195-52703214 | None:intergenic | 35.0% | |
| TTTCTTAATTCTCAGCTGCA+TGG | + | chr2_4:52703194-52703213 | Msa0334380:intron | 35.0% | |
| GAAGAATAAGGGATAAGATC+TGG | - | chr2_4:52703614-52703633 | None:intergenic | 35.0% | |
| ATCCAACTGAAAGACATGAA+GGG | - | chr2_4:52703854-52703873 | None:intergenic | 35.0% | |
| GATAAATTCGTCAATGCAGA+GGG | - | chr2_4:52703999-52704018 | None:intergenic | 35.0% | |
| TGATAAATTCGTCAATGCAG+AGG | - | chr2_4:52704000-52704019 | None:intergenic | 35.0% | |
| TACAAACAGATTTCGGTTTC+AGG | + | chr2_4:52704029-52704048 | Msa0334380:intron | 35.0% | |
| GAGATAGTTGTCTTACCTTA+AGG | - | chr2_4:52704161-52704180 | None:intergenic | 35.0% | |
| GTCCTTGAAATTGTAACATG+CGG | + | chr2_4:52704285-52704304 | Msa0334380:intron | 35.0% | |
| AACCGCATGTTACAATTTCA+AGG | - | chr2_4:52704290-52704309 | None:intergenic | 35.0% | |
| !! | TTTTAGTCCGTGAAAGTGTA+AGG | - | chr2_4:52704572-52704591 | None:intergenic | 35.0% |
| AGACAAATTTGACCCTGAAT+GGG | - | chr2_4:52704637-52704656 | None:intergenic | 35.0% | |
| AAGACAAATTTGACCCTGAA+TGG | - | chr2_4:52704638-52704657 | None:intergenic | 35.0% | |
| GGTTCTGTGAATTACTTAAG+AGG | - | chr2_4:52704674-52704693 | None:intergenic | 35.0% | |
| TAACCCTTATGCACATTATG+TGG | + | chr2_4:52704711-52704730 | Msa0334380:intron | 35.0% | |
| GTACCACATAATGTGCATAA+GGG | - | chr2_4:52704717-52704736 | None:intergenic | 35.0% | |
| TGTACCACATAATGTGCATA+AGG | - | chr2_4:52704718-52704737 | None:intergenic | 35.0% | |
| ! | GTTTTCCCAATCATACCATA+TGG | + | chr2_4:52704874-52704893 | Msa0334380:CDS | 35.0% |
| GGATACCATATGGTATGATT+GGG | - | chr2_4:52704882-52704901 | None:intergenic | 35.0% | |
| AGGATACCATATGGTATGAT+TGG | - | chr2_4:52704883-52704902 | None:intergenic | 35.0% | |
| ATAACATGTAGAACACTGCA+AGG | - | chr2_4:52704903-52704922 | None:intergenic | 35.0% | |
| TTGCAGTGTTCTACATGTTA+TGG | + | chr2_4:52704902-52704921 | Msa0334380:CDS | 35.0% | |
| TTTCTCCATTTATTCAGCTC+CGG | + | chr2_4:52704934-52704953 | Msa0334380:CDS | 35.0% | |
| CATATAACCTCATGGAAAAG+AGG | + | chr2_4:52704995-52705014 | Msa0334380:CDS | 35.0% | |
| TGATCTGTGATCATTGTTGT+GGG | + | chr2_4:52705019-52705038 | Msa0334380:CDS | 35.0% | |
| TTCACCTGTTTGGTTGTTAT+TGG | + | chr2_4:52705085-52705104 | Msa0334380:CDS | 35.0% | |
| ! | TCACCTGTTTGGTTGTTATT+GGG | + | chr2_4:52705086-52705105 | Msa0334380:CDS | 35.0% |
| TAACCCAATAACAACCAAAC+AGG | - | chr2_4:52705092-52705111 | None:intergenic | 35.0% | |
| GTTACACAATTTCTCATAGC+AGG | + | chr2_4:52705108-52705127 | Msa0334380:CDS | 35.0% | |
| ATCTGTCGCCTCTTATTATT+GGG | + | chr2_4:52705152-52705171 | Msa0334380:CDS | 35.0% | |
| ATCATGACCCCAATAATAAG+AGG | - | chr2_4:52705163-52705182 | None:intergenic | 35.0% | |
| ATCGAACGAAAAGGAATTTC+AGG | - | chr2_4:52705430-52705449 | None:intergenic | 35.0% | |
| GTAACACATAAGTCTCTTCA+TGG | - | chr2_4:52705461-52705480 | None:intergenic | 35.0% | |
| GTTATAGCAATCTGCAGAAA+AGG | - | chr2_4:52705910-52705929 | None:intergenic | 35.0% | |
| TTTCTGCAGATTGCTATAAC+TGG | + | chr2_4:52705910-52705929 | Msa0334380:intron | 35.0% | |
| ATCAGCTATTGCAACAGATT+TGG | + | chr2_4:52705951-52705970 | Msa0334380:CDS | 35.0% | |
| AAGAATAACATCCTACGGAT+TGG | + | chr2_4:52705976-52705995 | Msa0334380:CDS | 35.0% | |
| AGAATAACATCCTACGGATT+GGG | + | chr2_4:52705977-52705996 | Msa0334380:CDS | 35.0% | |
| GGAGATGTTATATTGTTCCT+TGG | + | chr2_4:52706015-52706034 | Msa0334380:CDS | 35.0% | |
| CTAATTGAAAGAGTAGTGGT+TGG | + | chr2_4:52706165-52706184 | Msa0334380:intron | 35.0% | |
| ACACTAAGGAACCATTTGTT+TGG | - | chr2_4:52706307-52706326 | None:intergenic | 35.0% | |
| AACAAATGGTTCCTTAGTGT+TGG | + | chr2_4:52706307-52706326 | Msa0334380:intron | 35.0% | |
| ACAAATGGTTCCTTAGTGTT+GGG | + | chr2_4:52706308-52706327 | Msa0334380:intron | 35.0% | |
| ! | CCTTAAGGCATCATGTATAT+GGG | - | chr2_4:52706404-52706423 | None:intergenic | 35.0% |
| ! | ACCTTAAGGCATCATGTATA+TGG | - | chr2_4:52706405-52706424 | None:intergenic | 35.0% |
| !!! | TGCCTTAAGGTTTTTTTAGG+TGG | + | chr2_4:52706414-52706433 | Msa0334380:intron | 35.0% |
| CTCCACCTAAAAAAACCTTA+AGG | - | chr2_4:52706419-52706438 | None:intergenic | 35.0% | |
| TGTGTAAAATGCAGGTTTGT+TGG | + | chr2_4:52706710-52706729 | Msa0334380:intron | 35.0% | |
| ! | GTGTAAAATGCAGGTTTGTT+GGG | + | chr2_4:52706711-52706730 | Msa0334380:intron | 35.0% |
| TTGAGAGTTTCAATGAGAAG+GGG | - | chr2_4:52706853-52706872 | None:intergenic | 35.0% | |
| CATTGAGAGTTTCAATGAGA+AGG | - | chr2_4:52706855-52706874 | None:intergenic | 35.0% | |
| AACATGGGAATATTTCATCG+GGG | - | chr2_4:52706910-52706929 | None:intergenic | 35.0% | |
| GAAGAACTCAAACTATAAGG+TGG | - | chr2_4:52707004-52707023 | None:intergenic | 35.0% | |
| AGGGAAGAACTCAAACTATA+AGG | - | chr2_4:52707007-52707026 | None:intergenic | 35.0% | |
| TCTGACAAATTGGTTGTTCT+AGG | + | chr2_4:52707096-52707115 | Msa0334380:three_prime_UTR | 35.0% | |
| AGAACAACAAGAGACAGAAG+TGG | - | chr2_4:52700789-52700808 | None:intergenic | 40.0% | |
| AACAAGAGAGAGATGTAGAC+AGG | - | chr2_4:52700813-52700832 | None:intergenic | 40.0% | |
| CTTCAAAATGAGGGGTTCTT+CGG | + | chr2_4:52700859-52700878 | Msa0334380:exon | 40.0% | |
| TTCAAAATGAGGGGTTCTTC+GGG | + | chr2_4:52700860-52700879 | Msa0334380:exon | 40.0% | |
| TTCTTCGGGTACTATCCATA+TGG | + | chr2_4:52700874-52700893 | Msa0334380:CDS | 40.0% | |
| TCTTCGGGTACTATCCATAT+GGG | + | chr2_4:52700875-52700894 | Msa0334380:CDS | 40.0% | |
| ACTATCCATATGGGTGGAAA+TGG | + | chr2_4:52700884-52700903 | Msa0334380:CDS | 40.0% | |
| CTATCCATATGGGTGGAAAT+GGG | + | chr2_4:52700885-52700904 | Msa0334380:CDS | 40.0% | |
| AACAATGATGGCAACCCAAA+AGG | - | chr2_4:52700966-52700985 | None:intergenic | 40.0% | |
| TCAACAAAGGAGACCCATTT+AGG | + | chr2_4:52701002-52701021 | Msa0334380:CDS | 40.0% | |
| ATTCAATTGGTTGAACCGTC+CGG | + | chr2_4:52701173-52701192 | Msa0334380:intron | 40.0% | |
| ! | ACAAGCAGGTTTTCTCACAT+TGG | + | chr2_4:52701320-52701339 | Msa0334380:intron | 40.0% |
| CCTTACAAAACCTGCTTGTA+AGG | - | chr2_4:52701392-52701411 | None:intergenic | 40.0% | |
| !! | CCTTACAAGCAGGTTTTGTA+AGG | + | chr2_4:52701389-52701408 | Msa0334380:intron | 40.0% |
| GATAACAGAAACCTGATAGC+AGG | - | chr2_4:52701478-52701497 | None:intergenic | 40.0% | |
| TTTCTGTTATCAGCCCACTA+GGG | + | chr2_4:52701487-52701506 | Msa0334380:intron | 40.0% | |
| ACGTGATATTGCCTGTACAT+GGG | + | chr2_4:52701535-52701554 | Msa0334380:intron | 40.0% | |
| !! | CCTTACAAAACCGGTTTGTA+AGG | - | chr2_4:52701585-52701604 | None:intergenic | 40.0% |
| !! | CCTTACAAACCGGTTTTGTA+AGG | + | chr2_4:52701582-52701601 | Msa0334380:intron | 40.0% |
| !! | CGGTTTTGTAAGGTTGAGTT+AGG | + | chr2_4:52701592-52701611 | Msa0334380:intron | 40.0% |
| ! | GAAAGTGTGGAAGTTAGAAG+TGG | + | chr2_4:52701687-52701706 | Msa0334380:intron | 40.0% |
| !! | ACTTTTGGGCTAGACTACAA+AGG | + | chr2_4:52701808-52701827 | Msa0334380:CDS | 40.0% |
| GACTACAAAGGAAATGTGTG+TGG | + | chr2_4:52701820-52701839 | Msa0334380:CDS | 40.0% | |
| CTACAAAGGAAATGTGTGTG+GGG | + | chr2_4:52701822-52701841 | Msa0334380:CDS | 40.0% | |
| GGATAGTCAGTTGAAACTTG+CGG | + | chr2_4:52701921-52701940 | Msa0334380:CDS | 40.0% | |
| TGGGTTTGTGATTATCCTGA+AGG | + | chr2_4:52702000-52702019 | Msa0334380:CDS | 40.0% | |
| !! | AGTTTCTCATTTCTGGTGTG+AGG | - | chr2_4:52702083-52702102 | None:intergenic | 40.0% |
| AGAGAGGAGTTTCTCATTTC+TGG | - | chr2_4:52702090-52702109 | None:intergenic | 40.0% | |
| AACTCCTCTCTTCAACTTCA+AGG | + | chr2_4:52702099-52702118 | Msa0334380:CDS | 40.0% | |
| AAGAAGAGGAGAGGATGTTA+GGG | + | chr2_4:52702284-52702303 | Msa0334380:intron | 40.0% | |
| CGGCATATTAGTTGTTATGC+TGG | + | chr2_4:52702351-52702370 | Msa0334380:intron | 40.0% | |
| TTCTCACTCAGCTGTCTTAA+AGG | + | chr2_4:52702559-52702578 | Msa0334380:CDS | 40.0% | |
| ATACATGGCTGACATAGGAA+AGG | + | chr2_4:52702898-52702917 | Msa0334380:CDS | 40.0% | |
| ! | AGCCAGGATTCTAACCTTTT+AGG | - | chr2_4:52703075-52703094 | None:intergenic | 40.0% |
| GTAAACAAAATAGCTCAGCC+AGG | - | chr2_4:52703091-52703110 | None:intergenic | 40.0% | |
| ATGCAGGGTAATTACCAACA+TGG | - | chr2_4:52703239-52703258 | None:intergenic | 40.0% | |
| ! | ACAAAACGATGGTTGATGCA+GGG | - | chr2_4:52703254-52703273 | None:intergenic | 40.0% |
| CGTTGTGTAGTTCAAACACA+CGG | - | chr2_4:52703333-52703352 | None:intergenic | 40.0% | |
| CGTGTGTTTGAACTACACAA+CGG | + | chr2_4:52703331-52703350 | Msa0334380:intron | 40.0% | |
| TGATAGCAAAACCGTTCATC+TGG | + | chr2_4:52703575-52703594 | Msa0334380:intron | 40.0% | |
| CATTTCCAAGTCCAGATGAA+CGG | - | chr2_4:52703589-52703608 | None:intergenic | 40.0% | |
| AAGGGAAGGCAACATTAACT+CGG | - | chr2_4:52703836-52703855 | None:intergenic | 40.0% | |
| AACTGAAAGACATGAAGGGA+AGG | - | chr2_4:52703850-52703869 | None:intergenic | 40.0% | |
| TTCCCTTCATGTCTTTCAGT+TGG | + | chr2_4:52703849-52703868 | Msa0334380:intron | 40.0% | |
| CATCCAACTGAAAGACATGA+AGG | - | chr2_4:52703855-52703874 | None:intergenic | 40.0% | |
| CTTCATGTCTTTCAGTTGGA+TGG | + | chr2_4:52703853-52703872 | Msa0334380:intron | 40.0% | |
| TGTCTTTCAGTTGGATGGAT+AGG | + | chr2_4:52703858-52703877 | Msa0334380:intron | 40.0% | |
| GATGCTATAACACCCATCAT+TGG | + | chr2_4:52703885-52703904 | Msa0334380:CDS | 40.0% | |
| TAAGGACAGAAGTTGCCATA+AGG | - | chr2_4:52704143-52704162 | None:intergenic | 40.0% | |
| TATGGCAACTTCTGTCCTTA+AGG | + | chr2_4:52704143-52704162 | Msa0334380:CDS | 40.0% | |
| ACAAATTTGACCCTGAATGG+GGG | - | chr2_4:52704635-52704654 | None:intergenic | 40.0% | |
| GACAAATTTGACCCTGAATG+GGG | - | chr2_4:52704636-52704655 | None:intergenic | 40.0% | |
| GTTAGATACGTGTAACATGC+TGG | - | chr2_4:52704695-52704714 | None:intergenic | 40.0% | |
| CTAATGCGGATATTGCTGAT+AGG | + | chr2_4:52704813-52704832 | Msa0334380:intron | 40.0% | |
| TAGGTTGCTGCAAAAGTGAT+AGG | + | chr2_4:52704832-52704851 | Msa0334380:intron | 40.0% | |
| AACACTGCAAGGATACCATA+TGG | - | chr2_4:52704892-52704911 | None:intergenic | 40.0% | |
| TATATGAGCAGCAGTTAGAG+TGG | - | chr2_4:52704981-52705000 | None:intergenic | 40.0% | |
| GTGATCTGTGATCATTGTTG+TGG | + | chr2_4:52705018-52705037 | Msa0334380:CDS | 40.0% | |
| AACAACCAAACAGGTGAAAG+AGG | - | chr2_4:52705083-52705102 | None:intergenic | 40.0% | |
| GATCTGTCGCCTCTTATTAT+TGG | + | chr2_4:52705151-52705170 | Msa0334380:CDS | 40.0% | |
| TCTGTCGCCTCTTATTATTG+GGG | + | chr2_4:52705153-52705172 | Msa0334380:CDS | 40.0% | |
| GAGGAAAAGATCGAACGAAA+AGG | - | chr2_4:52705439-52705458 | None:intergenic | 40.0% | |
| ACACATAAGTCTCTTCATGG+AGG | - | chr2_4:52705458-52705477 | None:intergenic | 40.0% | |
| !! | AGTATTGGTTCTCTAGCTCT+TGG | + | chr2_4:52705481-52705500 | Msa0334380:CDS | 40.0% |
| !! | ATTCCGGTTCACTGATTTGA+TGG | - | chr2_4:52705656-52705675 | None:intergenic | 40.0% |
| GAACCGGAATGCTTATATCA+TGG | + | chr2_4:52705666-52705685 | Msa0334380:CDS | 40.0% | |
| ATTGGGCATGTCAATGTGAT+TGG | + | chr2_4:52705994-52706013 | Msa0334380:CDS | 40.0% | |
| ! | GACTGACACATAGTTTTCCA+AGG | - | chr2_4:52706035-52706054 | None:intergenic | 40.0% |
| ACTTGTGAGTGTCTAACATG+AGG | - | chr2_4:52706080-52706099 | None:intergenic | 40.0% | |
| TAGTGGTTGGAGATCACTTA+CGG | + | chr2_4:52706178-52706197 | Msa0334380:intron | 40.0% | |
| ACACTTGAAACCCAACACTA+AGG | - | chr2_4:52706321-52706340 | None:intergenic | 40.0% | |
| CCCATATACATGATGCCTTA+AGG | + | chr2_4:52706401-52706420 | Msa0334380:intron | 40.0% | |
| !!! | GGTTTTTTTAGGTGGAGATG+TGG | + | chr2_4:52706422-52706441 | Msa0334380:intron | 40.0% |
| TTGCTCGACTCAATCTATAC+CGG | + | chr2_4:52706634-52706653 | Msa0334380:intron | 40.0% | |
| CTGACAGTATGAGAGAATGA+TGG | - | chr2_4:52706794-52706813 | None:intergenic | 40.0% | |
| CATCATTCTCTCATACTGTC+AGG | + | chr2_4:52706792-52706811 | Msa0334380:CDS | 40.0% | |
| AGAGACAGAAGTGGTGTGAA+AGG | - | chr2_4:52700780-52700799 | None:intergenic | 45.0% | |
| TGATCCCATTTCCACCCATA+TGG | - | chr2_4:52700892-52700911 | None:intergenic | 45.0% | |
| CAAAACCTGCTTGTAAGGTG+AGG | - | chr2_4:52701387-52701406 | None:intergenic | 45.0% | |
| GTTTCTGTTATCAGCCCACT+AGG | + | chr2_4:52701486-52701505 | Msa0334380:intron | 45.0% | |
| GACGTGATATTGCCTGTACA+TGG | + | chr2_4:52701534-52701553 | Msa0334380:intron | 45.0% | |
| GCAGTCTTCACCTTACAAAC+CGG | + | chr2_4:52701572-52701591 | Msa0334380:intron | 45.0% | |
| !!! | TGTTGCTTTTGTGGTTGCTG+AGG | + | chr2_4:52701660-52701679 | Msa0334380:intron | 45.0% |
| TTGCTGAGGAACTGAAAGTG+TGG | + | chr2_4:52701674-52701693 | Msa0334380:intron | 45.0% | |
| TGCTCGCAGTATATGCTTGT+TGG | + | chr2_4:52701945-52701964 | Msa0334380:CDS | 45.0% | |
| CAGACAAGTGAATCTTCACG+CGG | - | chr2_4:52701982-52702001 | None:intergenic | 45.0% | |
| GCGTGAAGATTCACTTGTCT+GGG | + | chr2_4:52701981-52702000 | Msa0334380:CDS | 45.0% | |
| AGGTCCTTGAAGTTGAAGAG+AGG | - | chr2_4:52702106-52702125 | None:intergenic | 45.0% | |
| GAAGAAGAGGAGAGGATGTT+AGG | + | chr2_4:52702283-52702302 | Msa0334380:intron | 45.0% | |
| TTTAAGCCTTTGGCAGCAGA+TGG | + | chr2_4:52702478-52702497 | Msa0334380:CDS | 45.0% | |
| TTAAGCCTTTGGCAGCAGAT+GGG | + | chr2_4:52702479-52702498 | Msa0334380:CDS | 45.0% | |
| CAGAGATACATGGCTGACAT+AGG | + | chr2_4:52702893-52702912 | Msa0334380:intron | 45.0% | |
| ! | CTGTGTTGATCGTTTGTGGT+GGG | + | chr2_4:52702927-52702946 | Msa0334380:CDS | 45.0% |
| !! | AAGGCATTGCAGCAACGAAA+TGG | - | chr2_4:52702997-52703016 | None:intergenic | 45.0% |
| ATTTCGTTGCTGCAATGCCT+TGG | + | chr2_4:52702996-52703015 | Msa0334380:CDS | 45.0% | |
| TGCTGCAATGCCTTGGATAA+CGG | + | chr2_4:52703003-52703022 | Msa0334380:CDS | 45.0% | |
| ! | CACAAAACGATGGTTGATGC+AGG | - | chr2_4:52703255-52703274 | None:intergenic | 45.0% |
| TCAGAGAGGACACAAAACGA+TGG | - | chr2_4:52703265-52703284 | None:intergenic | 45.0% | |
| GAATCGCACAAACACTTCTC+CGG | + | chr2_4:52703501-52703520 | Msa0334380:intron | 45.0% | |
| ACACTTCTCCGGTTGTATGT+AGG | + | chr2_4:52703512-52703531 | Msa0334380:intron | 45.0% | |
| CAAAACCGTTCATCTGGACT+TGG | + | chr2_4:52703581-52703600 | Msa0334380:intron | 45.0% | |
| GGATCATGCTCACCAATGAT+GGG | - | chr2_4:52703900-52703919 | None:intergenic | 45.0% | |
| AGGATCATGCTCACCAATGA+TGG | - | chr2_4:52703901-52703920 | None:intergenic | 45.0% | |
| TATTGTTCGGCGCATCCTTA+TGG | + | chr2_4:52704125-52704144 | Msa0334380:CDS | 45.0% | |
| GACCGATCCTTACACTTTCA+CGG | + | chr2_4:52704562-52704581 | Msa0334380:intron | 45.0% | |
| ! | GTCCGTGAAAGTGTAAGGAT+CGG | - | chr2_4:52704567-52704586 | None:intergenic | 45.0% |
| CTGCTGCTCATATAACCTCA+TGG | + | chr2_4:52704987-52705006 | Msa0334380:CDS | 45.0% | |
| ! | AGATCACCCTCTTTTCCATG+AGG | - | chr2_4:52705005-52705024 | None:intergenic | 45.0% |
| CTCCAATATGCGGTGTGTAA+CGG | - | chr2_4:52705053-52705072 | None:intergenic | 45.0% | |
| AGGATGGCAACTCCAATATG+CGG | - | chr2_4:52705063-52705082 | None:intergenic | 45.0% | |
| ACCAAACAGGTGAAAGAGGA+TGG | - | chr2_4:52705079-52705098 | None:intergenic | 45.0% | |
| TTGGGGTCATGATGAAGCAT+CGG | + | chr2_4:52705170-52705189 | Msa0334380:CDS | 45.0% | |
| !! | AATTCCAAGGATTGGCTCTG+AGG | + | chr2_4:52705257-52705276 | Msa0334380:intron | 45.0% |
| GACTGGAGACTTTCAGTTTG+CGG | - | chr2_4:52705561-52705580 | None:intergenic | 45.0% | |
| GGACCATCAAATCAGTGAAC+CGG | + | chr2_4:52705650-52705669 | Msa0334380:CDS | 45.0% | |
| ! | GATTATGTCCCACATCGACT+AGG | + | chr2_4:52706345-52706364 | Msa0334380:intron | 45.0% |
| ACTAGGAATGGAGGAAACGT+TGG | + | chr2_4:52706362-52706381 | Msa0334380:intron | 45.0% | |
| TGTGGTGTCCAAGTCTCTTT+AGG | + | chr2_4:52706440-52706459 | Msa0334380:intron | 45.0% | |
| GTGGTGTCCAAGTCTCTTTA+GGG | + | chr2_4:52706441-52706460 | Msa0334380:intron | 45.0% | |
| TGGTGTCCAAGTCTCTTTAG+GGG | + | chr2_4:52706442-52706461 | Msa0334380:intron | 45.0% | |
| GCAATAAAGGGTTGCATGAC+CGG | - | chr2_4:52706656-52706675 | None:intergenic | 45.0% | |
| AGAGTTTCAATGAGAAGGGG+AGG | - | chr2_4:52706850-52706869 | None:intergenic | 45.0% | |
| !!! | CACAAGACCGAGTTTTGAGA+AGG | - | chr2_4:52707189-52707208 | None:intergenic | 45.0% |
| TCGGGTACTATCCATATGGG+TGG | + | chr2_4:52700878-52700897 | Msa0334380:CDS | 50.0% | |
| ACAGTCCTCACCTTACAAGC+AGG | + | chr2_4:52701379-52701398 | Msa0334380:intron | 50.0% | |
| AGAGTCCGTCCAAGATCCAT+TGG | + | chr2_4:52701448-52701467 | Msa0334380:intron | 50.0% | |
| GAGTCCGTCCAAGATCCATT+GGG | + | chr2_4:52701449-52701468 | Msa0334380:intron | 50.0% | |
| ACGTCCATGACTGCACATCT+GGG | - | chr2_4:52701519-52701538 | None:intergenic | 50.0% | |
| GCATGCAGGCCTTCATCAAT+TGG | + | chr2_4:52701849-52701868 | Msa0334380:CDS | 50.0% | |
| GTGAATCTTCACGCGGAACA+GGG | - | chr2_4:52701975-52701994 | None:intergenic | 50.0% | |
| AGTGAATCTTCACGCGGAAC+AGG | - | chr2_4:52701976-52701995 | None:intergenic | 50.0% | |
| CGCGTGAAGATTCACTTGTC+TGG | + | chr2_4:52701980-52701999 | Msa0334380:CDS | 50.0% | |
| TTGCTCCTCGCAAGAAGAAG+AGG | + | chr2_4:52702270-52702289 | Msa0334380:intron | 50.0% | |
| TGGCTGACATAGGAAAGGCA+TGG | + | chr2_4:52702903-52702922 | Msa0334380:CDS | 50.0% | |
| ! | TGGCCTGTGTTGATCGTTTG+TGG | + | chr2_4:52702923-52702942 | Msa0334380:CDS | 50.0% |
| CCACCACAAACGATCAACAC+AGG | - | chr2_4:52702929-52702948 | None:intergenic | 50.0% | |
| ! | CCTGTGTTGATCGTTTGTGG+TGG | + | chr2_4:52702926-52702945 | Msa0334380:CDS | 50.0% |
| GCATTGCAGCAACGAAATGG+CGG | - | chr2_4:52702994-52703013 | None:intergenic | 50.0% | |
| ! | TGCAATGCCTTGGATAACGG+TGG | + | chr2_4:52703006-52703025 | Msa0334380:CDS | 50.0% |
| TTCTCCGGTTGTATGTAGGC+AGG | + | chr2_4:52703516-52703535 | Msa0334380:intron | 50.0% | |
| TCTCCGGTTGTATGTAGGCA+GGG | + | chr2_4:52703517-52703536 | Msa0334380:intron | 50.0% | |
| TCCATTTATTCAGCTCCGGC+CGG | + | chr2_4:52704938-52704957 | Msa0334380:CDS | 50.0% | |
| GGCAGTCATTCTGAACAACC+CGG | - | chr2_4:52704960-52704979 | None:intergenic | 50.0% | |
| GTCCGTTACACACCGCATAT+TGG | + | chr2_4:52705048-52705067 | Msa0334380:CDS | 50.0% | |
| GCCATCCTCTTTCACCTGTT+TGG | + | chr2_4:52705075-52705094 | Msa0334380:CDS | 50.0% | |
| GGCTCATCAACAGTGATTGC+TGG | + | chr2_4:52705129-52705148 | Msa0334380:CDS | 50.0% | |
| TACACCTCAGAGCCAATCCT+TGG | - | chr2_4:52705264-52705283 | None:intergenic | 50.0% | |
| !! | GCTCTGAGGTGTACCAATGT+TGG | + | chr2_4:52705271-52705290 | Msa0334380:intron | 50.0% |
| CATGTGCCTGACAACTGGAT+CGG | + | chr2_4:52705580-52705599 | Msa0334380:CDS | 50.0% | |
| ATGTGCCTGACAACTGGATC+GGG | + | chr2_4:52705581-52705600 | Msa0334380:CDS | 50.0% | |
| CATTGACATGCCCAATCCGT+AGG | - | chr2_4:52705990-52706009 | None:intergenic | 50.0% | |
| ATCTCCACTCTTGCCTGTTG+TGG | + | chr2_4:52706125-52706144 | Msa0334380:CDS | 50.0% | |
| CATACCACAACAGGCAAGAG+TGG | - | chr2_4:52706132-52706151 | None:intergenic | 50.0% | |
| ! | TGTCCCACATCGACTAGGAA+TGG | + | chr2_4:52706350-52706369 | Msa0334380:intron | 50.0% |
| CCTCCATTCCTAGTCGATGT+GGG | - | chr2_4:52706356-52706375 | None:intergenic | 50.0% | |
| TCCTCCATTCCTAGTCGATG+TGG | - | chr2_4:52706357-52706376 | None:intergenic | 50.0% | |
| !! | ACTAAGTGTTGGGGAGTCCA+GGG | - | chr2_4:52706503-52706522 | None:intergenic | 50.0% |
| !! | TACTAAGTGTTGGGGAGTCC+AGG | - | chr2_4:52706504-52706523 | None:intergenic | 50.0% |
| !! | ATGCAGGTTTGTTGGGCTCT+TGG | + | chr2_4:52706718-52706737 | Msa0334380:intron | 50.0% |
| TGTCAGGATTCTGACGAGCA+TGG | + | chr2_4:52706808-52706827 | Msa0334380:CDS | 50.0% | |
| GTCAGGATTCTGACGAGCAT+GGG | + | chr2_4:52706809-52706828 | Msa0334380:CDS | 50.0% | |
| GCAGCCCAATGGATCTTGGA+CGG | - | chr2_4:52701456-52701475 | None:intergenic | 55.0% | |
| CGTCCATGACTGCACATCTG+GGG | - | chr2_4:52701518-52701537 | None:intergenic | 55.0% | |
| CACGTCCATGACTGCACATC+TGG | - | chr2_4:52701520-52701539 | None:intergenic | 55.0% | |
| CCTCTCCTCTTCTTCTTGCG+AGG | - | chr2_4:52702278-52702297 | None:intergenic | 55.0% | |
| CCTCGCAAGAAGAAGAGGAG+AGG | + | chr2_4:52702275-52702294 | Msa0334380:intron | 55.0% | |
| CTCCGGTTGTATGTAGGCAG+GGG | + | chr2_4:52703518-52703537 | Msa0334380:intron | 55.0% | |
| CCATTTATTCAGCTCCGGCC+GGG | + | chr2_4:52704939-52704958 | Msa0334380:CDS | 55.0% | |
| GTCATTCTGAACAACCCGGC+CGG | - | chr2_4:52704956-52704975 | None:intergenic | 55.0% | |
| CCAGTTGTCAGGCACATGAC+TGG | - | chr2_4:52705578-52705597 | None:intergenic | 55.0% | |
| CCAGTCATGTGCCTGACAAC+TGG | + | chr2_4:52705575-52705594 | Msa0334380:CDS | 55.0% | |
| ! | CCCACATCGACTAGGAATGG+AGG | + | chr2_4:52706353-52706372 | Msa0334380:intron | 55.0% |
| CCAGGACCCCTAAAGAGACT+TGG | - | chr2_4:52706451-52706470 | None:intergenic | 55.0% | |
| ! | CCAAGTCTCTTTAGGGGTCC+TGG | + | chr2_4:52706448-52706467 | Msa0334380:intron | 55.0% |
| !! | CGGAAATGGGCTAAACGTCC+AGG | - | chr2_4:52706469-52706488 | None:intergenic | 55.0% |
| GCAGGCAGCCCAATGGATCT+TGG | - | chr2_4:52701460-52701479 | None:intergenic | 60.0% | |
| CCTGATAGCAGGCAGCCCAA+TGG | - | chr2_4:52701467-52701486 | None:intergenic | 60.0% | |
| CCATTGGGCTGCCTGCTATC+AGG | + | chr2_4:52701464-52701483 | Msa0334380:intron | 60.0% | |
| ! | ATCTGGGGCGTGACCCTAGT+GGG | - | chr2_4:52701503-52701522 | None:intergenic | 60.0% |
| ACGCCCCAGATGTGCAGTCA+TGG | + | chr2_4:52701512-52701531 | Msa0334380:intron | 60.0% | |
| GTGTGTGGGGACAAGCATGC+AGG | + | chr2_4:52701835-52701854 | Msa0334380:CDS | 60.0% | |
| AGCCTTTGGCAGCAGATGGG+TGG | + | chr2_4:52702482-52702501 | Msa0334380:CDS | 60.0% | |
| CTCCACCCATCTGCTGCCAA+AGG | - | chr2_4:52702487-52702506 | None:intergenic | 60.0% | |
| GGCCCCTGCCTACATACAAC+CGG | - | chr2_4:52703523-52703542 | None:intergenic | 60.0% | |
| TGGGGTTGAGCCCCCATTCA+GGG | + | chr2_4:52704622-52704641 | Msa0334380:intron | 60.0% | |
| CCCGGCCGGAGCTGAATAAA+TGG | - | chr2_4:52704942-52704961 | None:intergenic | 60.0% | |
| GCCTGACAACTGGATCGGGA+AGG | + | chr2_4:52705585-52705604 | Msa0334380:CDS | 60.0% | |
| GCCTTCCCGATCCAGTTGTC+AGG | - | chr2_4:52705589-52705608 | None:intergenic | 60.0% | |
| ! | CATCTGGGGCGTGACCCTAG+TGG | - | chr2_4:52701504-52701523 | None:intergenic | 65.0% |
| CTGGGGTTGAGCCCCCATTC+AGG | + | chr2_4:52704621-52704640 | Msa0334380:intron | 65.0% | |
| !! | GGAGCGTCGGGAGCGGAAAT+GGG | - | chr2_4:52706482-52706501 | None:intergenic | 65.0% |
| ! | TTGGGGAGTCCAGGGAGCGT+CGG | - | chr2_4:52706495-52706514 | None:intergenic | 65.0% |
| !! | GGGAGCGTCGGGAGCGGAAA+TGG | - | chr2_4:52706483-52706502 | None:intergenic | 70.0% |
| TTTCCGCTCCCGACGCTCCC+TGG | + | chr2_4:52706483-52706502 | Msa0334380:intron | 70.0% | |
| !! | AGTCCAGGGAGCGTCGGGAG+CGG | - | chr2_4:52706489-52706508 | None:intergenic | 70.0% |
| !! | TGGGGAGTCCAGGGAGCGTC+GGG | - | chr2_4:52706494-52706513 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 52700757 | 52707227 | 52700757 | ID=Msa0334380;Name=Msa0334380 |
| chr2_4 | mRNA | 52700757 | 52707227 | 52700757 | ID=Msa0334380-mRNA-1;Parent=Msa0334380;Name=Msa0334380-mRNA-1;_AED=0.06;_eAED=0.06;_QI=109|1|1|1|0.9|0.81|11|289|688 |
| chr2_4 | exon | 52700757 | 52701023 | 52700757 | ID=Msa0334380-mRNA-1:exon:15864;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52701804 | 52702156 | 52701804 | ID=Msa0334380-mRNA-1:exon:15865;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52702435 | 52702580 | 52702435 | ID=Msa0334380-mRNA-1:exon:15866;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52702896 | 52703079 | 52702896 | ID=Msa0334380-mRNA-1:exon:15867;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52703868 | 52703941 | 52703868 | ID=Msa0334380-mRNA-1:exon:15868;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52704051 | 52704164 | 52704051 | ID=Msa0334380-mRNA-1:exon:15869;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52704835 | 52705191 | 52704835 | ID=Msa0334380-mRNA-1:exon:15870;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52705427 | 52705687 | 52705427 | ID=Msa0334380-mRNA-1:exon:15871;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52705919 | 52706146 | 52705919 | ID=Msa0334380-mRNA-1:exon:15872;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52706724 | 52707117 | 52706724 | ID=Msa0334380-mRNA-1:exon:15873;Parent=Msa0334380-mRNA-1 |
| chr2_4 | exon | 52707141 | 52707227 | 52707141 | ID=Msa0334380-mRNA-1:exon:15874;Parent=Msa0334380-mRNA-1 |
| chr2_4 | five_prime_UTR | 52700757 | 52700865 | 52700757 | ID=Msa0334380-mRNA-1:five_prime_utr;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52700866 | 52701023 | 52700866 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52701804 | 52702156 | 52701804 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52702435 | 52702580 | 52702435 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52702896 | 52703079 | 52702896 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52703868 | 52703941 | 52703868 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52704051 | 52704164 | 52704051 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52704835 | 52705191 | 52704835 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52705427 | 52705687 | 52705427 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52705919 | 52706146 | 52705919 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | CDS | 52706724 | 52706915 | 52706724 | ID=Msa0334380-mRNA-1:cds;Parent=Msa0334380-mRNA-1 |
| chr2_4 | three_prime_UTR | 52706916 | 52707117 | 52706916 | ID=Msa0334380-mRNA-1:three_prime_utr;Parent=Msa0334380-mRNA-1 |
| chr2_4 | three_prime_UTR | 52707141 | 52707227 | 52707141 | ID=Msa0334380-mRNA-1:three_prime_utr;Parent=Msa0334380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
