Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105580 | XP_003622996.1 | 97.973 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105580 | sp|Q944R1|PLY15_ARATH | 75.231 | 432 | 97 | 4 | 23 | 444 | 39 | 470 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105580 | G7L2D3 | 97.973 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa1105580 | 0.841748 | 3.936820e-58 | -8.615850e-47 |
| Msa0006840 | Msa1105580 | 0.884159 | 2.432261e-71 | -8.615850e-47 |
| Msa0030070 | Msa1105580 | 0.805831 | 1.103773e-49 | -8.615850e-47 |
| Msa0031080 | Msa1105580 | 0.802613 | 5.162161e-49 | -8.615850e-47 |
| Msa0032130 | Msa1105580 | 0.830349 | 3.087632e-55 | -8.615850e-47 |
| Msa0032390 | Msa1105580 | 0.824692 | 7.033942e-54 | -8.615850e-47 |
| Msa0036810 | Msa1105580 | 0.833568 | 4.949596e-56 | -8.615850e-47 |
| Msa0041910 | Msa1105580 | 0.800145 | 1.653251e-48 | -8.615850e-47 |
| Msa0043840 | Msa1105580 | 0.800349 | 1.502571e-48 | -8.615850e-47 |
| Msa0045620 | Msa1105580 | 0.882472 | 1.012262e-70 | -8.615850e-47 |
| Msa0050530 | Msa1105580 | 0.875758 | 2.394045e-68 | -8.615850e-47 |
| Msa0057860 | Msa1105580 | 0.846674 | 1.872678e-59 | -8.615850e-47 |
| Msa0063190 | Msa1105580 | 0.810717 | 1.003325e-50 | -8.615850e-47 |
| Msa0073270 | Msa1105580 | 0.801090 | 1.060977e-48 | -8.615850e-47 |
| Msa0075840 | Msa1105580 | 0.834678 | 2.608272e-56 | -8.615850e-47 |
| Msa0079410 | Msa1105580 | 0.823552 | 1.302806e-53 | -8.615850e-47 |
| Msa0080370 | Msa1105580 | 0.806613 | 7.555112e-50 | -8.615850e-47 |
| Msa0080440 | Msa1105580 | 0.813287 | 2.762604e-51 | -8.615850e-47 |
| Msa0094180 | Msa1105580 | 0.815307 | 9.885841e-52 | -8.615850e-47 |
| Msa0100600 | Msa1105580 | 0.841272 | 5.255772e-58 | -8.615850e-47 |
| Msa0100890 | Msa1105580 | 0.863755 | 1.984368e-64 | -8.615850e-47 |
| Msa0102920 | Msa1105580 | 0.838825 | 2.284794e-57 | -8.615850e-47 |
| Msa0104570 | Msa1105580 | 0.815922 | 7.212456e-52 | -8.615850e-47 |
| Msa0605350 | Msa1105580 | 0.804541 | 2.056234e-49 | -8.615850e-47 |
| Msa0605520 | Msa1105580 | 0.823605 | 1.266036e-53 | -8.615850e-47 |
| Msa0606120 | Msa1105580 | 0.814883 | 1.228159e-51 | -8.615850e-47 |
| Msa0618840 | Msa1105580 | 0.824890 | 6.316901e-54 | -8.615850e-47 |
| Msa0618990 | Msa1105580 | 0.818920 | 1.523719e-52 | -8.615850e-47 |
| Msa0623310 | Msa1105580 | 0.871397 | 7.053020e-67 | -8.615850e-47 |
| Msa0626980 | Msa1105580 | 0.858068 | 1.061686e-62 | -8.615850e-47 |
| Msa0627360 | Msa1105580 | 0.859195 | 4.893263e-63 | -8.615850e-47 |
| Msa0646260 | Msa1105580 | 0.825923 | 3.596166e-54 | -8.615850e-47 |
| Msa0647440 | Msa1105580 | 0.808840 | 2.541195e-50 | -8.615850e-47 |
| Msa0658120 | Msa1105580 | 0.805672 | 1.192377e-49 | -8.615850e-47 |
| Msa0663290 | Msa1105580 | 0.840145 | 1.037125e-57 | -8.615850e-47 |
| Msa0664070 | Msa1105580 | 0.839671 | 1.378241e-57 | -8.615850e-47 |
| Msa0672420 | Msa1105580 | 0.827816 | 1.269719e-54 | -8.615850e-47 |
| Msa0673940 | Msa1105580 | 0.867622 | 1.195012e-65 | -8.615850e-47 |
| Msa0676200 | Msa1105580 | 0.832442 | 9.431527e-56 | -8.615850e-47 |
| Msa0684750 | Msa1105580 | 0.807278 | 5.465025e-50 | -8.615850e-47 |
| Msa0687370 | Msa1105580 | 0.876345 | 1.503875e-68 | -8.615850e-47 |
| Msa0688620 | Msa1105580 | 0.802339 | 5.879914e-49 | -8.615850e-47 |
| Msa0689830 | Msa1105580 | 0.836656 | 8.235901e-57 | -8.615850e-47 |
| Msa0702970 | Msa1105580 | 0.803903 | 2.791686e-49 | -8.615850e-47 |
| Msa0705140 | Msa1105580 | 0.811296 | 7.514440e-51 | -8.615850e-47 |
| Msa0707260 | Msa1105580 | 0.807578 | 4.720281e-50 | -8.615850e-47 |
| Msa0708020 | Msa1105580 | 0.815112 | 1.092526e-51 | -8.615850e-47 |
| Msa0708980 | Msa1105580 | 0.823321 | 1.474737e-53 | -8.615850e-47 |
| Msa0715510 | Msa1105580 | 0.825307 | 5.034915e-54 | -8.615850e-47 |
| Msa0716700 | Msa1105580 | 0.830259 | 3.247991e-55 | -8.615850e-47 |
| Msa0722700 | Msa1105580 | 0.830832 | 2.352037e-55 | -8.615850e-47 |
| Msa0732970 | Msa1105580 | 0.831443 | 1.664604e-55 | -8.615850e-47 |
| Msa0749190 | Msa1105580 | 0.802772 | 4.788133e-49 | -8.615850e-47 |
| Msa0750520 | Msa1105580 | 0.809692 | 1.668781e-50 | -8.615850e-47 |
| Msa0751720 | Msa1105580 | 0.848718 | 5.126256e-60 | -8.615850e-47 |
| Msa0761830 | Msa1105580 | 0.821298 | 4.350142e-53 | -8.615850e-47 |
| Msa0764770 | Msa1105580 | 0.879644 | 1.053435e-69 | -8.615850e-47 |
| Msa0771910 | Msa1105580 | 0.826412 | 2.752075e-54 | -8.615850e-47 |
| Msa0772420 | Msa1105580 | 0.815824 | 7.585911e-52 | -8.615850e-47 |
| Msa0773960 | Msa1105580 | 0.820138 | 8.035191e-53 | -8.615850e-47 |
| Msa0790330 | Msa1105580 | 0.813904 | 2.021358e-51 | -8.615850e-47 |
| Msa0799170 | Msa1105580 | 0.852750 | 3.762010e-61 | -8.615850e-47 |
| Msa0804170 | Msa1105580 | 0.810941 | 8.973228e-51 | -8.615850e-47 |
| Msa0810080 | Msa1105580 | 0.821995 | 3.001084e-53 | -8.615850e-47 |
| Msa0831820 | Msa1105580 | 0.865349 | 6.298439e-65 | -8.615850e-47 |
| Msa0835750 | Msa1105580 | 0.807725 | 4.392084e-50 | -8.615850e-47 |
| Msa0837610 | Msa1105580 | 0.844447 | 7.516355e-59 | -8.615850e-47 |
| Msa0837680 | Msa1105580 | 0.814762 | 1.305782e-51 | -8.615850e-47 |
| Msa0841500 | Msa1105580 | 0.803157 | 3.986351e-49 | -8.615850e-47 |
| Msa0125590 | Msa1105580 | 0.807376 | 5.210371e-50 | -8.615850e-47 |
| Msa0133920 | Msa1105580 | 0.801060 | 1.076167e-48 | -8.615850e-47 |
| Msa0136330 | Msa1105580 | 0.802846 | 4.622057e-49 | -8.615850e-47 |
| Msa0147680 | Msa1105580 | 0.861269 | 1.155037e-63 | -8.615850e-47 |
| Msa0154760 | Msa1105580 | 0.802110 | 6.555150e-49 | -8.615850e-47 |
| Msa0158760 | Msa1105580 | 0.800697 | 1.276134e-48 | -8.615850e-47 |
| Msa0168380 | Msa1105580 | 0.820677 | 6.045433e-53 | -8.615850e-47 |
| Msa0171060 | Msa1105580 | 0.802082 | 6.640088e-49 | -8.615850e-47 |
| Msa0185690 | Msa1105580 | 0.835080 | 2.066789e-56 | -8.615850e-47 |
| Msa0186560 | Msa1105580 | 0.838678 | 2.493105e-57 | -8.615850e-47 |
| Msa0204970 | Msa1105580 | 0.849141 | 3.912423e-60 | -8.615850e-47 |
| Msa0206370 | Msa1105580 | 0.837822 | 4.142721e-57 | -8.615850e-47 |
| Msa0219840 | Msa1105580 | 0.811619 | 6.394780e-51 | -8.615850e-47 |
| Msa0225800 | Msa1105580 | 0.833603 | 4.851142e-56 | -8.615850e-47 |
| Msa0235080 | Msa1105580 | 0.817797 | 2.736341e-52 | -8.615850e-47 |
| Msa0372100 | Msa1105580 | 0.829930 | 3.907358e-55 | -8.615850e-47 |
| Msa0383940 | Msa1105580 | 0.803309 | 3.706436e-49 | -8.615850e-47 |
| Msa0385730 | Msa1105580 | 0.843833 | 1.098705e-58 | -8.615850e-47 |
| Msa0387890 | Msa1105580 | 0.821386 | 4.150788e-53 | -8.615850e-47 |
| Msa0388620 | Msa1105580 | 0.824148 | 9.441605e-54 | -8.615850e-47 |
| Msa0401060 | Msa1105580 | 0.803411 | 3.530905e-49 | -8.615850e-47 |
| Msa0416210 | Msa1105580 | 0.817357 | 3.439403e-52 | -8.615850e-47 |
| Msa0421290 | Msa1105580 | 0.824028 | 1.007607e-53 | -8.615850e-47 |
| Msa0421750 | Msa1105580 | 0.801689 | 7.997065e-49 | -8.615850e-47 |
| Msa0427820 | Msa1105580 | 0.808773 | 2.627109e-50 | -8.615850e-47 |
| Msa0429970 | Msa1105580 | 0.805498 | 1.296494e-49 | -8.615850e-47 |
| Msa0432200 | Msa1105580 | 0.819024 | 1.443322e-52 | -8.615850e-47 |
| Msa0433630 | Msa1105580 | 0.851136 | 1.080034e-60 | -8.615850e-47 |
| Msa0434360 | Msa1105580 | 0.803936 | 2.747502e-49 | -8.615850e-47 |
| Msa0436100 | Msa1105580 | 0.807245 | 5.552691e-50 | -8.615850e-47 |
| Msa0458100 | Msa1105580 | 0.802065 | 6.694338e-49 | -8.615850e-47 |
| Msa0467250 | Msa1105580 | 0.818592 | 1.809170e-52 | -8.615850e-47 |
| Msa0477480 | Msa1105580 | 0.830199 | 3.359547e-55 | -8.615850e-47 |
| Msa0982960 | Msa1105580 | 0.805681 | 1.187095e-49 | -8.615850e-47 |
| Msa1008850 | Msa1105580 | 0.849077 | 4.075111e-60 | -8.615850e-47 |
| Msa1021560 | Msa1105580 | 0.951603 | 1.441275e-109 | -8.615850e-47 |
| Msa1026710 | Msa1105580 | 0.805847 | 1.095362e-49 | -8.615850e-47 |
| Msa1033420 | Msa1105580 | 0.824296 | 8.717289e-54 | -8.615850e-47 |
| Msa1041370 | Msa1105580 | 0.819159 | 1.344147e-52 | -8.615850e-47 |
| Msa1050260 | Msa1105580 | 0.822779 | 1.973016e-53 | -8.615850e-47 |
| Msa1060300 | Msa1105580 | 0.895557 | 8.555703e-76 | -8.615850e-47 |
| Msa1071410 | Msa1105580 | 0.808627 | 2.821670e-50 | -8.615850e-47 |
| Msa1073060 | Msa1105580 | 0.820047 | 8.428706e-53 | -8.615850e-47 |
| Msa1078300 | Msa1105580 | 0.823889 | 1.086177e-53 | -8.615850e-47 |
| Msa1081270 | Msa1105580 | 0.812907 | 3.347482e-51 | -8.615850e-47 |
| Msa1083630 | Msa1105580 | 0.809952 | 1.466975e-50 | -8.615850e-47 |
| Msa1085560 | Msa1105580 | 0.816644 | 4.972729e-52 | -8.615850e-47 |
| Msa1085680 | Msa1105580 | 0.888266 | 6.876228e-73 | -8.615850e-47 |
| Msa1088260 | Msa1105580 | 0.815335 | 9.747459e-52 | -8.615850e-47 |
| Msa1105540 | Msa1105580 | 0.974708 | 1.238832e-138 | -8.615850e-47 |
| Msa1105580 | Msa1124210 | 0.825615 | 4.255158e-54 | -8.615850e-47 |
| Msa1105580 | Msa1128620 | 0.831450 | 1.658080e-55 | -8.615850e-47 |
| Msa1105580 | Msa1130770 | 0.824025 | 1.009317e-53 | -8.615850e-47 |
| Msa1105580 | Msa1138800 | 0.813911 | 2.014232e-51 | -8.615850e-47 |
| Msa1105580 | Msa1144990 | 0.853544 | 2.227650e-61 | -8.615850e-47 |
| Msa1105580 | Msa1147560 | 0.807296 | 5.416171e-50 | -8.615850e-47 |
| Msa1105580 | Msa1148930 | 0.968955 | 2.031966e-129 | -8.615850e-47 |
| Msa1105580 | Msa1160930 | 0.802320 | 5.932155e-49 | -8.615850e-47 |
| Msa1105580 | Msa1162360 | 0.835476 | 1.640813e-56 | -8.615850e-47 |
| Msa1105580 | Msa1168310 | 0.813709 | 2.231454e-51 | -8.615850e-47 |
| Msa1105580 | Msa1180840 | 0.861102 | 1.298406e-63 | -8.615850e-47 |
| Msa1105580 | Msa1188340 | 0.837142 | 6.190066e-57 | -8.615850e-47 |
| Msa1105580 | Msa1188930 | 0.813377 | 2.639569e-51 | -8.615850e-47 |
| Msa1105580 | Msa1191550 | 0.835313 | 1.804119e-56 | -8.615850e-47 |
| Msa1105580 | Msa1206040 | 0.807679 | 4.493313e-50 | -8.615850e-47 |
| Msa1105580 | Msa1217890 | 0.820360 | 7.145611e-53 | -8.615850e-47 |
| Msa1105580 | Msa1220580 | 0.809260 | 2.066296e-50 | -8.615850e-47 |
| Msa1105580 | Msa1220720 | 0.822995 | 1.757224e-53 | -8.615850e-47 |
| Msa1105580 | Msa1226370 | 0.804040 | 2.614279e-49 | -8.615850e-47 |
| Msa1105580 | Msa1227760 | 0.852948 | 3.300770e-61 | -8.615850e-47 |
| Msa1105580 | Msa1231490 | 0.855758 | 5.089172e-62 | -8.615850e-47 |
| Msa1105580 | Msa1240940 | 0.830987 | 2.154084e-55 | -8.615850e-47 |
| Msa1105580 | Msa1255710 | 0.830247 | 3.270253e-55 | -8.615850e-47 |
| Msa1105580 | Msa1265570 | 0.827353 | 1.639277e-54 | -8.615850e-47 |
| Msa1105580 | Msa1270840 | 0.826279 | 2.960462e-54 | -8.615850e-47 |
| Msa1105580 | Msa1278030 | 0.848096 | 7.618897e-60 | -8.615850e-47 |
| Msa1105580 | Msa1281370 | 0.813041 | 3.128694e-51 | -8.615850e-47 |
| Msa1105580 | Msa1282300 | 0.841270 | 5.261051e-58 | -8.615850e-47 |
| Msa1105580 | Msa1288970 | -0.807004 | 6.247590e-50 | -8.615850e-47 |
| Msa1105580 | Msa1293840 | 0.804525 | 2.071717e-49 | -8.615850e-47 |
| Msa1105580 | Msa1294790 | 0.804135 | 2.498043e-49 | -8.615850e-47 |
| Msa1105580 | Msa1296860 | 0.836350 | 9.851100e-57 | -8.615850e-47 |
| Msa1105580 | Msa1297070 | 0.801936 | 7.115931e-49 | -8.615850e-47 |
| Msa1105580 | Msa1312240 | 0.805823 | 1.108198e-49 | -8.615850e-47 |
| Msa1105580 | Msa1328280 | 0.801230 | 9.930262e-49 | -8.615850e-47 |
| Msa1105580 | Msa1328870 | 0.802795 | 4.735158e-49 | -8.615850e-47 |
| Msa1105580 | Msa1334560 | 0.809709 | 1.654931e-50 | -8.615850e-47 |
| Msa1105580 | Msa1334670 | 0.829526 | 4.899984e-55 | -8.615850e-47 |
| Msa1105580 | Msa1342760 | 0.839076 | 1.966694e-57 | -8.615850e-47 |
| Msa1105580 | Msa1361680 | 0.815399 | 9.429632e-52 | -8.615850e-47 |
| Msa1105580 | Msa1362590 | 0.835525 | 1.595033e-56 | -8.615850e-47 |
| Msa1105580 | Msa1363690 | 0.824832 | 6.518894e-54 | -8.615850e-47 |
| Msa1105580 | Msa1365230 | 0.827148 | 1.836245e-54 | -8.615850e-47 |
| Msa1105580 | Msa1368170 | 0.826909 | 2.093972e-54 | -8.615850e-47 |
| Msa1105580 | Msa1369410 | 0.829756 | 4.309061e-55 | -8.615850e-47 |
| Msa1105580 | Msa1371800 | 0.874512 | 6.371598e-68 | -8.615850e-47 |
| Msa1105580 | Msa1372030 | 0.868712 | 5.325828e-66 | -8.615850e-47 |
| Msa1105580 | Msa1376310 | 0.875527 | 2.873066e-68 | -8.615850e-47 |
| Msa1105580 | Msa1378400 | 0.812498 | 4.113617e-51 | -8.615850e-47 |
| Msa1105580 | Msa1381800 | 0.803376 | 3.590961e-49 | -8.615850e-47 |
| Msa1105580 | Msa1385570 | 0.866056 | 3.766897e-65 | -8.615850e-47 |
| Msa1105580 | Msa1389310 | 0.815122 | 1.086787e-51 | -8.615850e-47 |
| Msa1105580 | Msa1389820 | 0.812786 | 3.557638e-51 | -8.615850e-47 |
| Msa1105580 | Msa1395050 | 0.804681 | 1.922353e-49 | -8.615850e-47 |
| Msa1105580 | Msa1396550 | 0.833944 | 3.985878e-56 | -8.615850e-47 |
| Msa1105580 | Msa1398490 | 0.833425 | 5.373992e-56 | -8.615850e-47 |
| Msa1105580 | Msa1413020 | 0.811448 | 6.965693e-51 | -8.615850e-47 |
| Msa1105580 | Msa1420830 | 0.836326 | 9.994315e-57 | -8.615850e-47 |
| Msa1105580 | Msa1421540 | 0.816065 | 6.701393e-52 | -8.615850e-47 |
| Msa1105580 | Msa1431520 | 0.818530 | 1.868149e-52 | -8.615850e-47 |
| Msa1105580 | Msa1434700 | 0.816487 | 5.391313e-52 | -8.615850e-47 |
| Msa1105580 | Msa1438510 | 0.835676 | 1.461150e-56 | -8.615850e-47 |
| Msa1105580 | Msa1439920 | 0.804394 | 2.206248e-49 | -8.615850e-47 |
| Msa1105580 | Msa1447900 | 0.826294 | 2.935446e-54 | -8.615850e-47 |
| Msa1105580 | Msa1460970 | 0.866225 | 3.332111e-65 | -8.615850e-47 |
| Msa1105580 | Msa1462780 | 0.818597 | 1.804141e-52 | -8.615850e-47 |
| Msa1105580 | Msa1463590 | 0.806368 | 8.509907e-50 | -8.615850e-47 |
| Msa0240540 | Msa1105580 | 0.800538 | 1.375249e-48 | -8.615850e-47 |
| Msa0241040 | Msa1105580 | 0.818038 | 2.415021e-52 | -8.615850e-47 |
| Msa0249870 | Msa1105580 | 0.839822 | 1.259213e-57 | -8.615850e-47 |
| Msa0260570 | Msa1105580 | 0.813257 | 2.804663e-51 | -8.615850e-47 |
| Msa0260630 | Msa1105580 | 0.812703 | 3.710714e-51 | -8.615850e-47 |
| Msa0260980 | Msa1105580 | 0.871865 | 4.934867e-67 | -8.615850e-47 |
| Msa0273360 | Msa1105580 | 0.811165 | 8.025965e-51 | -8.615850e-47 |
| Msa0276730 | Msa1105580 | 0.812329 | 4.478207e-51 | -8.615850e-47 |
| Msa0278840 | Msa1105580 | 0.812522 | 4.063104e-51 | -8.615850e-47 |
| Msa0279000 | Msa1105580 | 0.833771 | 4.403563e-56 | -8.615850e-47 |
| Msa0281540 | Msa1105580 | 0.828121 | 1.071925e-54 | -8.615850e-47 |
| Msa0288400 | Msa1105580 | 0.802287 | 6.026461e-49 | -8.615850e-47 |
| Msa0316630 | Msa1105580 | 0.815266 | 1.009488e-51 | -8.615850e-47 |
| Msa0320580 | Msa1105580 | 0.824990 | 5.981819e-54 | -8.615850e-47 |
| Msa0334380 | Msa1105580 | 0.801082 | 1.064741e-48 | -8.615850e-47 |
| Msa0336430 | Msa1105580 | 0.857103 | 2.050623e-62 | -8.615850e-47 |
| Msa0336460 | Msa1105580 | 0.826648 | 2.417073e-54 | -8.615850e-47 |
| Msa0336520 | Msa1105580 | 0.874828 | 4.975399e-68 | -8.615850e-47 |
| Msa0342220 | Msa1105580 | 0.809197 | 2.131608e-50 | -8.615850e-47 |
| Msa0344110 | Msa1105580 | 0.829023 | 6.490235e-55 | -8.615850e-47 |
| Msa0349930 | Msa1105580 | 0.803265 | 3.784930e-49 | -8.615850e-47 |
| Msa0514020 | Msa1105580 | 0.813884 | 2.041356e-51 | -8.615850e-47 |
| Msa0518680 | Msa1105580 | 0.802405 | 5.697923e-49 | -8.615850e-47 |
| Msa0521060 | Msa1105580 | 0.827634 | 1.403653e-54 | -8.615850e-47 |
| Msa0521510 | Msa1105580 | 0.833691 | 4.611910e-56 | -8.615850e-47 |
| Msa0521530 | Msa1105580 | 0.830307 | 3.162162e-55 | -8.615850e-47 |
| Msa0527850 | Msa1105580 | 0.816668 | 4.911414e-52 | -8.615850e-47 |
| Msa0530660 | Msa1105580 | 0.856857 | 2.422072e-62 | -8.615850e-47 |
| Msa0541740 | Msa1105580 | 0.800610 | 1.329566e-48 | -8.615850e-47 |
| Msa0544410 | Msa1105580 | 0.809859 | 1.536358e-50 | -8.615850e-47 |
| Msa0544430 | Msa1105580 | 0.808095 | 3.664207e-50 | -8.615850e-47 |
| Msa0549870 | Msa1105580 | 0.804687 | 1.916585e-49 | -8.615850e-47 |
| Msa0552570 | Msa1105580 | 0.823362 | 1.443099e-53 | -8.615850e-47 |
| Msa0560570 | Msa1105580 | 0.802386 | 5.749595e-49 | -8.615850e-47 |
| Msa0566460 | Msa1105580 | 0.829967 | 3.827813e-55 | -8.615850e-47 |
| Msa0568710 | Msa1105580 | 0.812672 | 3.768868e-51 | -8.615850e-47 |
| Msa0571350 | Msa1105580 | 0.825728 | 4.001034e-54 | -8.615850e-47 |
| Msa0572830 | Msa1105580 | 0.827883 | 1.223441e-54 | -8.615850e-47 |
| Msa0574660 | Msa1105580 | 0.861800 | 7.952440e-64 | -8.615850e-47 |
| Msa0575950 | Msa1105580 | 0.825650 | 4.175635e-54 | -8.615850e-47 |
| Msa0576330 | Msa1105580 | 0.884405 | 1.972791e-71 | -8.615850e-47 |
| Msa0582460 | Msa1105580 | 0.821684 | 3.542553e-53 | -8.615850e-47 |
| Msa0584530 | Msa1105580 | 0.802346 | 5.860206e-49 | -8.615850e-47 |
| Msa0584970 | Msa1105580 | 0.820651 | 6.129143e-53 | -8.615850e-47 |
| Msa0586200 | Msa1105580 | 0.811180 | 7.963157e-51 | -8.615850e-47 |
| Msa0587180 | Msa1105580 | 0.867021 | 1.860037e-65 | -8.615850e-47 |
| Msa0844400 | Msa1105580 | 0.853244 | 2.716033e-61 | -8.615850e-47 |
| Msa0846900 | Msa1105580 | 0.863584 | 2.242565e-64 | -8.615850e-47 |
| Msa0850600 | Msa1105580 | 0.822901 | 1.848751e-53 | -8.615850e-47 |
| Msa0856610 | Msa1105580 | 0.810489 | 1.123810e-50 | -8.615850e-47 |
| Msa0870020 | Msa1105580 | 0.801280 | 9.702169e-49 | -8.615850e-47 |
| Msa0876630 | Msa1105580 | 0.827772 | 1.300380e-54 | -8.615850e-47 |
| Msa0900090 | Msa1105580 | 0.815653 | 8.278890e-52 | -8.615850e-47 |
| Msa0926760 | Msa1105580 | 0.837000 | 6.725987e-57 | -8.615850e-47 |
| Msa0929900 | Msa1105580 | 0.861422 | 1.037516e-63 | -8.615850e-47 |
| Msa0931370 | Msa1105580 | 0.802764 | 4.804735e-49 | -8.615850e-47 |
| Msa0945900 | Msa1105580 | 0.834758 | 2.490267e-56 | -8.615850e-47 |
| Msa0965470 | Msa1105580 | 0.802867 | 4.576439e-49 | -8.615850e-47 |
| Msa0966830 | Msa1105580 | 0.812231 | 4.704099e-51 | -8.615850e-47 |
| Msa0978980 | Msa1105580 | 0.819103 | 1.384218e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105580 | MtrunA17_Chr7g0237761 | 97.973 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa1105580 | MtrunA17_Chr1g0169731 | 75.561 | 446 | 102 | 3 | 6 | 444 | 5 | 450 | 0.0 | 685 |
| Msa1105580 | MtrunA17_Chr4g0058051 | 71.728 | 382 | 107 | 1 | 64 | 444 | 26 | 407 | 0.0 | 580 |
| Msa1105580 | MtrunA17_Chr6g0458201 | 65.803 | 386 | 132 | 0 | 59 | 444 | 19 | 404 | 0.0 | 563 |
| Msa1105580 | MtrunA17_Chr3g0116521 | 70.466 | 386 | 114 | 0 | 59 | 444 | 21 | 406 | 0.0 | 556 |
| Msa1105580 | MtrunA17_Chr3g0123321 | 69.171 | 386 | 116 | 2 | 59 | 444 | 21 | 403 | 0.0 | 531 |
| Msa1105580 | MtrunA17_Chr3g0123331 | 63.377 | 385 | 138 | 3 | 62 | 444 | 23 | 406 | 6.50e-177 | 501 |
| Msa1105580 | MtrunA17_Chr1g0210321 | 62.466 | 373 | 137 | 1 | 67 | 436 | 35 | 407 | 9.16e-177 | 503 |
| Msa1105580 | MtrunA17_Chr1g0180381 | 60.471 | 382 | 144 | 1 | 66 | 440 | 34 | 415 | 4.90e-175 | 498 |
| Msa1105580 | MtrunA17_Chr7g0264891 | 63.564 | 376 | 136 | 1 | 66 | 440 | 35 | 410 | 4.17e-174 | 496 |
| Msa1105580 | MtrunA17_Chr4g0060211 | 55.440 | 386 | 163 | 4 | 66 | 444 | 51 | 434 | 4.49e-157 | 451 |
| Msa1105580 | MtrunA17_Chr5g0416061 | 58.873 | 355 | 145 | 1 | 91 | 444 | 95 | 449 | 3.80e-148 | 429 |
| Msa1105580 | MtrunA17_Chr8g0362561 | 55.801 | 362 | 152 | 2 | 91 | 444 | 94 | 455 | 2.48e-145 | 422 |
| Msa1105580 | MtrunA17_Chr2g0288921 | 56.000 | 350 | 150 | 3 | 96 | 444 | 63 | 409 | 8.15e-143 | 414 |
| Msa1105580 | MtrunA17_Chr5g0416041 | 50.224 | 446 | 211 | 3 | 10 | 444 | 4 | 449 | 1.28e-142 | 415 |
| Msa1105580 | MtrunA17_Chr4g0075231 | 57.429 | 350 | 145 | 3 | 96 | 444 | 39 | 385 | 2.88e-142 | 412 |
| Msa1105580 | MtrunA17_Chr6g0452861 | 56.780 | 354 | 152 | 1 | 92 | 444 | 100 | 453 | 1.34e-141 | 412 |
| Msa1105580 | MtrunA17_Chr7g0216581 | 48.690 | 458 | 197 | 6 | 9 | 444 | 10 | 451 | 3.45e-138 | 404 |
| Msa1105580 | MtrunA17_Chr8g0373761 | 45.070 | 355 | 185 | 7 | 96 | 444 | 42 | 392 | 2.54e-100 | 305 |
| Msa1105580 | MtrunA17_Chr8g0373721 | 44.507 | 355 | 187 | 7 | 96 | 444 | 42 | 392 | 2.99e-100 | 305 |
| Msa1105580 | MtrunA17_Chr3g0089181 | 44.507 | 355 | 187 | 7 | 96 | 444 | 23 | 373 | 1.36e-99 | 302 |
| Msa1105580 | MtrunA17_Chr8g0373701 | 43.662 | 355 | 190 | 7 | 96 | 444 | 97 | 447 | 3.74e-96 | 296 |
| Msa1105580 | MtrunA17_Chr8g0373731 | 45.352 | 355 | 184 | 7 | 96 | 444 | 42 | 392 | 4.51e-94 | 289 |
| Msa1105580 | MtrunA17_Chr5g0403481 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.18e-89 | 277 |
| Msa1105580 | MtrunA17_Chr5g0403461 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.18e-89 | 277 |
| Msa1105580 | MtrunA17_Chr5g0403491 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.18e-89 | 277 |
| Msa1105580 | MtrunA17_Chr4g0031851 | 45.062 | 324 | 170 | 6 | 121 | 440 | 14 | 333 | 6.80e-89 | 275 |
| Msa1105580 | MtrunA17_Chr5g0403391 | 43.662 | 355 | 190 | 7 | 96 | 444 | 41 | 391 | 1.08e-87 | 272 |
| Msa1105580 | MtrunA17_Chr5g0414541 | 42.697 | 356 | 192 | 8 | 96 | 444 | 41 | 391 | 1.09e-86 | 270 |
| Msa1105580 | MtrunA17_Chr5g0403411 | 44.225 | 355 | 188 | 7 | 96 | 444 | 41 | 391 | 2.78e-86 | 269 |
| Msa1105580 | MtrunA17_Chr1g0183941 | 44.981 | 269 | 144 | 3 | 171 | 437 | 1 | 267 | 6.58e-75 | 235 |
| Msa1105580 | MtrunA17_Chr3g0113551 | 71.429 | 126 | 36 | 0 | 241 | 366 | 161 | 286 | 4.52e-61 | 201 |
| Msa1105580 | MtrunA17_Chr6g0481851 | 39.636 | 275 | 108 | 6 | 129 | 401 | 6 | 224 | 6.86e-53 | 177 |
| Msa1105580 | MtrunA17_Chr2g0288901 | 50.641 | 156 | 72 | 3 | 290 | 444 | 5 | 156 | 5.12e-46 | 156 |
| Msa1105580 | MtrunA17_Chr2g0288911 | 58.197 | 122 | 50 | 1 | 171 | 291 | 1 | 122 | 3.59e-41 | 142 |
| Msa1105580 | MtrunA17_Chr1g0212931 | 36.806 | 288 | 156 | 7 | 113 | 399 | 13 | 275 | 1.63e-39 | 144 |
| Msa1105580 | MtrunA17_Chr1g0182021 | 35.540 | 287 | 161 | 4 | 113 | 399 | 62 | 324 | 4.18e-37 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105580 | AT4G13710.1 | 75.231 | 432 | 97 | 4 | 23 | 444 | 39 | 470 | 0.0 | 682 |
| Msa1105580 | AT4G13710.2 | 76.123 | 423 | 91 | 4 | 32 | 444 | 29 | 451 | 0.0 | 677 |
| Msa1105580 | AT3G24670.1 | 76.376 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 0.0 | 668 |
| Msa1105580 | AT3G07010.1 | 81.378 | 392 | 73 | 0 | 53 | 444 | 25 | 416 | 0.0 | 665 |
| Msa1105580 | AT1G04680.1 | 80.977 | 389 | 70 | 1 | 60 | 444 | 41 | 429 | 0.0 | 660 |
| Msa1105580 | AT4G13210.2 | 74.424 | 434 | 102 | 2 | 12 | 444 | 13 | 438 | 0.0 | 641 |
| Msa1105580 | AT5G48900.1 | 81.538 | 390 | 72 | 0 | 55 | 444 | 28 | 417 | 0.0 | 636 |
| Msa1105580 | AT3G07010.2 | 82.880 | 368 | 63 | 0 | 77 | 444 | 16 | 383 | 0.0 | 636 |
| Msa1105580 | AT4G13210.1 | 79.695 | 394 | 79 | 1 | 52 | 444 | 8 | 401 | 0.0 | 630 |
| Msa1105580 | AT3G24230.1 | 65.632 | 451 | 141 | 6 | 6 | 444 | 3 | 451 | 0.0 | 594 |
| Msa1105580 | AT1G67750.1 | 71.916 | 381 | 105 | 1 | 64 | 444 | 30 | 408 | 0.0 | 572 |
| Msa1105580 | AT5G63180.1 | 68.421 | 399 | 116 | 2 | 48 | 444 | 42 | 432 | 0.0 | 570 |
| Msa1105580 | AT4G24780.2 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 559 |
| Msa1105580 | AT4G24780.1 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 559 |
| Msa1105580 | AT3G27400.2 | 66.404 | 381 | 127 | 1 | 64 | 444 | 37 | 416 | 0.0 | 531 |
| Msa1105580 | AT3G27400.1 | 66.404 | 381 | 127 | 1 | 64 | 444 | 33 | 412 | 0.0 | 530 |
| Msa1105580 | AT3G53190.1 | 58.042 | 429 | 146 | 4 | 8 | 436 | 20 | 414 | 1.69e-172 | 493 |
| Msa1105580 | AT5G04310.3 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 3.14e-170 | 486 |
| Msa1105580 | AT5G04310.1 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.32e-169 | 484 |
| Msa1105580 | AT5G04310.2 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.32e-169 | 484 |
| Msa1105580 | AT3G54920.1 | 57.360 | 394 | 144 | 4 | 62 | 440 | 32 | 416 | 4.56e-163 | 469 |
| Msa1105580 | AT5G55720.1 | 55.875 | 383 | 157 | 5 | 63 | 444 | 21 | 392 | 2.30e-154 | 443 |
| Msa1105580 | AT1G11920.1 | 59.714 | 350 | 138 | 3 | 96 | 444 | 37 | 384 | 5.53e-154 | 442 |
| Msa1105580 | AT3G01270.1 | 53.301 | 409 | 181 | 3 | 46 | 444 | 67 | 475 | 3.53e-152 | 441 |
| Msa1105580 | AT1G14420.1 | 55.556 | 360 | 154 | 1 | 91 | 444 | 100 | 459 | 3.22e-149 | 432 |
| Msa1105580 | AT5G15110.1 | 57.465 | 355 | 149 | 2 | 92 | 444 | 118 | 472 | 1.44e-148 | 431 |
| Msa1105580 | AT4G22090.1 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 5.15e-147 | 424 |
| Msa1105580 | AT4G22080.1 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 1.14e-146 | 424 |
| Msa1105580 | AT2G02720.1 | 46.916 | 454 | 222 | 5 | 6 | 444 | 6 | 455 | 8.85e-142 | 413 |
| Msa1105580 | AT1G30350.1 | 53.009 | 349 | 148 | 3 | 96 | 444 | 36 | 368 | 9.71e-129 | 377 |
| Msa1105580 | AT5G09280.1 | 48.387 | 248 | 125 | 3 | 129 | 375 | 6 | 251 | 3.51e-78 | 245 |
| Msa1105580 | AT3G09540.1 | 38.408 | 289 | 150 | 7 | 113 | 399 | 61 | 323 | 2.37e-42 | 154 |
| Msa1105580 | AT3G55140.1 | 37.884 | 293 | 146 | 9 | 113 | 399 | 14 | 276 | 5.31e-42 | 152 |
| Msa1105580 | AT3G09540.3 | 38.062 | 289 | 147 | 8 | 113 | 399 | 61 | 319 | 9.68e-40 | 147 |
| Msa1105580 | AT3G55140.2 | 36.719 | 256 | 131 | 7 | 150 | 399 | 22 | 252 | 5.47e-35 | 132 |
| Msa1105580 | AT3G09540.2 | 36.992 | 246 | 129 | 5 | 113 | 357 | 61 | 281 | 7.72e-35 | 131 |
Find 170 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTGCATACAACCATTT+TGG | 0.110425 | 7_3:+44176906 | Msa1105580:CDS |
| TCTTGTCAACAGTTAGATTT+TGG | 0.119998 | 7_3:+44177933 | Msa1105580:three_prime_UTR |
| CGTAGCTCCCCTTCCCATTT+TGG | 0.137331 | 7_3:+44176505 | Msa1105580:CDS |
| ATGAGAACTGTTGTTGTTAT+TGG | 0.149715 | 7_3:+44177975 | Msa1105580:three_prime_UTR |
| TCTTTGGTTCCAGTCATATT+TGG | 0.228663 | 7_3:+44176563 | Msa1105580:CDS |
| TCATGATCAATTCTTGCTTC+AGG | 0.237394 | 7_3:-44176342 | None:intergenic |
| TGGTCTTGTTGATGCTATTA+TGG | 0.249104 | 7_3:+44176618 | Msa1105580:CDS |
| TTGCATTGTTATAGTAGATT+TGG | 0.253485 | 7_3:+44177856 | Msa1105580:three_prime_UTR |
| CCATTGTCCTCCATCCAAAA+TGG | 0.255429 | 7_3:-44176519 | None:intergenic |
| TAGAAGCCATCTCTCACTTT+TGG | 0.262555 | 7_3:+44178017 | Msa1105580:three_prime_UTR |
| ATGATACAGGTTATGTTATT+AGG | 0.266694 | 7_3:+44176843 | Msa1105580:intron |
| GGTGATGGCATTTCCATCTT+TGG | 0.269913 | 7_3:+44176547 | Msa1105580:CDS |
| TATGCTAGAGCCTCAAGTTT+AGG | 0.285322 | 7_3:+44177608 | Msa1105580:CDS |
| TGGATACAGGGTCCGGAGTA+TGG | 0.302482 | 7_3:+44177501 | Msa1105580:CDS |
| TTCACGGGGTCGTCGTCTCT+TGG | 0.302742 | 7_3:-44176238 | None:intergenic |
| TTCCTATTGCCCATTTCATT+TGG | 0.306173 | 7_3:-44178238 | None:intergenic |
| GCTGATTGTGCCATTGGTTT+TGG | 0.316248 | 7_3:+44176166 | Msa1105580:CDS |
| AGAAGAAGATGAGAAGAAAA+TGG | 0.320484 | 7_3:-44172514 | None:intergenic |
| CTAGTTACCTTGGCATCCTT+TGG | 0.320663 | 7_3:-44176941 | None:intergenic |
| TCCAACTAAAGAAGATGATT+TGG | 0.323522 | 7_3:-44177633 | None:intergenic |
| TGACGGAGAGTGCCAGGTCT+TGG | 0.329790 | 7_3:-44176262 | None:intergenic |
| TCGGCTTACAATCATGGATA+TGG | 0.339277 | 7_3:-44176465 | None:intergenic |
| ATGCTAGAGCCTCAAGTTTA+GGG | 0.340135 | 7_3:+44177609 | Msa1105580:CDS |
| GGATAAGACCCTCCCCAAAA+TGG | 0.344066 | 7_3:-44176920 | None:intergenic |
| GCCAATGTTCATATTGCCTT+TGG | 0.350632 | 7_3:+44176394 | Msa1105580:CDS |
| GTTCTTTCCCTTTACTCGTT+TGG | 0.357030 | 7_3:-44177729 | None:intergenic |
| GCCAAATCATCTTCTTTAGT+TGG | 0.358035 | 7_3:+44177632 | Msa1105580:CDS |
| TCCTATTGCCCATTTCATTT+GGG | 0.364442 | 7_3:-44178237 | None:intergenic |
| TTGATCTGTCCCAAATGAAA+TGG | 0.366978 | 7_3:+44178228 | Msa1105580:three_prime_UTR |
| TGAATCCCTTGGAAAATTAG+AGG | 0.369319 | 7_3:-44178067 | None:intergenic |
| TCGTAAGAATGTTACCTCTT+TGG | 0.375965 | 7_3:-44177380 | None:intergenic |
| TTTGGTGTCGTGTGAGAAAA+AGG | 0.376288 | 7_3:-44172537 | None:intergenic |
| ATTGGCACCACGACCATCTA+TGG | 0.380940 | 7_3:-44176377 | None:intergenic |
| CATGATCAATTCTTGCTTCA+GGG | 0.386947 | 7_3:-44176341 | None:intergenic |
| AATGTTACCTCTTTGGCAAA+AGG | 0.387769 | 7_3:-44177373 | None:intergenic |
| GACGGAGAGTGCCAGGTCTT+GGG | 0.402712 | 7_3:-44176261 | None:intergenic |
| GGTCTTGTTGATGCTATTAT+GGG | 0.421679 | 7_3:+44176619 | Msa1105580:CDS |
| TCACGGGGTCGTCGTCTCTT+GGG | 0.425792 | 7_3:-44176237 | None:intergenic |
| GGAGAGAAAGAAAAGCATAA+AGG | 0.426668 | 7_3:+44177792 | Msa1105580:three_prime_UTR |
| TTGCCTTGGCTGTTAATTGT+GGG | 0.427394 | 7_3:-44177328 | None:intergenic |
| TCCCAGTCGGCTTACAATCA+TGG | 0.429765 | 7_3:-44176471 | None:intergenic |
| GAGTATGGAAGGGTTGGAAT+TGG | 0.435726 | 7_3:+44177516 | Msa1105580:CDS |
| AGTGCCAGGTCTTGGGTTCA+CGG | 0.439411 | 7_3:-44176254 | None:intergenic |
| CATTGGGTGATGTATGCTAT+TGG | 0.440613 | 7_3:+44177292 | Msa1105580:CDS |
| AACAGTTTCAAGACCATAGA+TGG | 0.441561 | 7_3:+44176364 | Msa1105580:CDS |
| TCAACAACCAAACGAGTAAA+GGG | 0.445435 | 7_3:+44177722 | Msa1105580:three_prime_UTR |
| GTTGCCTTGGCTGTTAATTG+TGG | 0.451055 | 7_3:-44177329 | None:intergenic |
| TATAACAATGCAATAATAAG+AGG | 0.451336 | 7_3:-44177846 | None:intergenic |
| CTCAATTTACCTCGTTGTGG+TGG | 0.451940 | 7_3:-44176678 | None:intergenic |
| GTGCCAGGTCTTGGGTTCAC+GGG | 0.453527 | 7_3:-44176253 | None:intergenic |
| ATCAACAACCAAACGAGTAA+AGG | 0.455062 | 7_3:+44177721 | Msa1105580:three_prime_UTR |
| GTGACAAAGAGGGTGGATAC+AGG | 0.460057 | 7_3:+44177488 | Msa1105580:CDS |
| ATGTTACCTCTTTGGCAAAA+GGG | 0.462229 | 7_3:-44177372 | None:intergenic |
| TCCCAAATGAAATGGGCAAT+AGG | 0.464163 | 7_3:+44178236 | Msa1105580:three_prime_UTR |
| GTTAAGCAACAATGGAGTTA+CGG | 0.469919 | 7_3:+44172584 | Msa1105580:exon |
| GAAAGAAAAGCATAAAGGAA+TGG | 0.470361 | 7_3:+44177797 | Msa1105580:three_prime_UTR |
| TTAGTTGGAACTTTAACTGC+AGG | 0.471378 | 7_3:+44177647 | Msa1105580:CDS |
| ACGGCGTGACGGAGAGTGCC+AGG | 0.476026 | 7_3:-44176268 | None:intergenic |
| AATATGACTGGAACCAAAGA+TGG | 0.477110 | 7_3:-44176560 | None:intergenic |
| GTGGTGGGTGAAGTAGTTAT+TGG | 0.479572 | 7_3:-44176662 | None:intergenic |
| GCTGGCGCTGTGACAAGCTT+TGG | 0.480343 | 7_3:+44176122 | Msa1105580:CDS |
| GCTGCAGCTCCTCTTCCTGA+TGG | 0.482198 | 7_3:-44177581 | None:intergenic |
| CTGGTGTTATTAAATGTCGC+CGG | 0.482263 | 7_3:+44177672 | Msa1105580:CDS |
| ACCATGGAAGCAATCTCCTC+TGG | 0.483733 | 7_3:-44173208 | None:intergenic |
| CGGTTGGCTGATTGTGCCAT+TGG | 0.488142 | 7_3:+44176160 | Msa1105580:CDS |
| TATGGAAGGGTTGGAATTGG+AGG | 0.491858 | 7_3:+44177519 | Msa1105580:CDS |
| ATCCATGATTGTAAGCCGAC+TGG | 0.492456 | 7_3:+44176469 | Msa1105580:CDS |
| CAGCGCCAGCAGTCATCCAT+TGG | 0.493207 | 7_3:-44176109 | None:intergenic |
| TGATCTGTCCCAAATGAAAT+GGG | 0.493800 | 7_3:+44178229 | Msa1105580:three_prime_UTR |
| CATTGTCCTCCATCCAAAAT+GGG | 0.494585 | 7_3:-44176518 | None:intergenic |
| AAACAATGACTATACACATT+GGG | 0.495499 | 7_3:+44177276 | Msa1105580:CDS |
| TCTCTGTCTAATTGCGCTGA+TGG | 0.499109 | 7_3:+44176598 | Msa1105580:CDS |
| TGGTGTTATTAAATGTCGCC+GGG | 0.500739 | 7_3:+44177673 | Msa1105580:CDS |
| GTAGTTATTGGAAACGGTAA+TGG | 0.501809 | 7_3:-44176650 | None:intergenic |
| TCCAGAGGAGATTGCTTCCA+TGG | 0.502756 | 7_3:+44173207 | Msa1105580:CDS |
| TACAGGGTCCGGAGTATGGA+AGG | 0.503644 | 7_3:+44177505 | Msa1105580:CDS |
| GAATGTATTGATCAAATAGT+TGG | 0.508802 | 7_3:+44178258 | Msa1105580:three_prime_UTR |
| AAGAAGCGTGATAGCGAGAA+TGG | 0.510985 | 7_3:-44172629 | None:intergenic |
| CCCAAAATGGTTGTATGCAA+TGG | 0.513203 | 7_3:-44176907 | None:intergenic |
| GGGCAAGGTATCTGTTGCCT+TGG | 0.513269 | 7_3:-44177342 | None:intergenic |
| GAAATCCAATGGATGACTGC+TGG | 0.513725 | 7_3:+44176104 | Msa1105580:CDS |
| GTGATCAATCCAAATATGAC+TGG | 0.515085 | 7_3:-44176572 | None:intergenic |
| TTGTTATAGTAGATTTGGAT+TGG | 0.515669 | 7_3:+44177861 | Msa1105580:three_prime_UTR |
| ATTGGAAACGGTAATGGCGG+TGG | 0.517945 | 7_3:-44176644 | None:intergenic |
| GTCACGCCGTCATTCAAGAT+AGG | 0.520035 | 7_3:+44176281 | Msa1105580:CDS |
| GAATCCCTTGGAAAATTAGA+GGG | 0.523122 | 7_3:-44178066 | None:intergenic |
| CATGATGATAGTGTTGTGAA+TGG | 0.528531 | 7_3:+44172829 | Msa1105580:intron |
| CTTTGGCAAAAGGGTTCTGA+GGG | 0.532600 | 7_3:-44177363 | None:intergenic |
| GGAACTTTAACTGCAGGTGC+TGG | 0.536994 | 7_3:+44177653 | Msa1105580:CDS |
| GGTTGGAATTGGAGGTCCGA+GGG | 0.539450 | 7_3:+44177527 | Msa1105580:CDS |
| GTACCGCCGCAGAAAGCGGT+TGG | 0.543660 | 7_3:+44176144 | Msa1105580:CDS |
| AATAGTAATGCATGCTCCAA+AGG | 0.544329 | 7_3:-44176410 | None:intergenic |
| TCTTTGGCAAAAGGGTTCTG+AGG | 0.544752 | 7_3:-44177364 | None:intergenic |
| TCCATGATTGTAAGCCGACT+GGG | 0.546175 | 7_3:+44176470 | Msa1105580:CDS |
| GAGCTTGAATAATTCATCAA+TGG | 0.547562 | 7_3:+44172873 | Msa1105580:CDS |
| AAGAGGGTGGATACAGGGTC+CGG | 0.551709 | 7_3:+44177494 | Msa1105580:CDS |
| GTCGTTATGATCAATAGCAT+TGG | 0.551956 | 7_3:-44172662 | None:intergenic |
| AATGCTATCGGTGGCCGTGA+CGG | 0.552465 | 7_3:+44176193 | Msa1105580:CDS |
| TCAATTTACCTCGTTGTGGT+GGG | 0.552926 | 7_3:-44176677 | None:intergenic |
| TTGGGGAGGGTCTTATCCAA+AGG | 0.555778 | 7_3:+44176925 | Msa1105580:CDS |
| TCCTCCATCCAAAATGGGAA+GGG | 0.556374 | 7_3:-44176513 | None:intergenic |
| GGTCCGGAGTATGGAAGGGT+TGG | 0.562652 | 7_3:+44177510 | Msa1105580:CDS |
| ATCACCAATGTCATCATCCA+TGG | 0.564338 | 7_3:+44176439 | Msa1105580:CDS |
| AAAACAGAGTTAAGCAACAA+TGG | 0.566759 | 7_3:+44172576 | Msa1105580:exon |
| GTCTTATCCAAAGGATGCCA+AGG | 0.567344 | 7_3:+44176934 | Msa1105580:CDS |
| CTATTGATCATAACGACTCA+AGG | 0.567769 | 7_3:+44172668 | Msa1105580:CDS |
| GGTGAAGTAGTTATTGGAAA+CGG | 0.568326 | 7_3:-44176656 | None:intergenic |
| GACCCCGTGAACCCAAGACC+TGG | 0.571184 | 7_3:+44176250 | Msa1105580:CDS |
| GTCCTCCATCCAAAATGGGA+AGG | 0.575724 | 7_3:-44176514 | None:intergenic |
| CAGCCAACCGCTTTCTGCGG+CGG | 0.578877 | 7_3:-44176147 | None:intergenic |
| TGTATTAACACATGCCACCC+CGG | 0.580417 | 7_3:-44177691 | None:intergenic |
| TACGCAATCACACGGAGAGA+AGG | 0.580498 | 7_3:+44176053 | Msa1105580:CDS |
| TGCCAGGTCTTGGGTTCACG+GGG | 0.582221 | 7_3:-44176252 | None:intergenic |
| TGACAAAGAGGGTGGATACA+GGG | 0.585715 | 7_3:+44177489 | Msa1105580:CDS |
| TAAACAATGACTATACACAT+TGG | 0.589439 | 7_3:+44177275 | Msa1105580:CDS |
| ATTTAGCAAAAGGTCTCCCT+CGG | 0.591755 | 7_3:-44177543 | None:intergenic |
| CTATCGGTGGCCGTGACGGA+AGG | 0.592368 | 7_3:+44176197 | Msa1105580:CDS |
| CCTCCATCCAAAATGGGAAG+GGG | 0.592528 | 7_3:-44176512 | None:intergenic |
| CAATGGCCTATCTTGAATGA+CGG | 0.593970 | 7_3:-44176287 | None:intergenic |
| AATCAGCCAACCGCTTTCTG+CGG | 0.594304 | 7_3:-44176150 | None:intergenic |
| TAATCTCCAAAAGTGAGAGA+TGG | 0.597530 | 7_3:-44178023 | None:intergenic |
| ATAATTCATCAATGGCGGAA+AGG | 0.597934 | 7_3:+44172881 | Msa1105580:CDS |
| AGTCTCAATTTACCTCGTTG+TGG | 0.602217 | 7_3:-44176681 | None:intergenic |
| ATGTGGGACTGGAAATCCAA+TGG | 0.603052 | 7_3:+44176093 | Msa1105580:CDS |
| CAAAAGGGTTCTGAGGGGCA+AGG | 0.604683 | 7_3:-44177357 | None:intergenic |
| AATCATGGATATGGACACCA+TGG | 0.604716 | 7_3:-44176456 | None:intergenic |
| TCCAAAGGCAATATGAACAT+TGG | 0.605546 | 7_3:-44176395 | None:intergenic |
| TGATTTGGCCCCTAAACTTG+AGG | 0.605907 | 7_3:-44177618 | None:intergenic |
| ATTCCAACCCTTCCATACTC+CGG | 0.611120 | 7_3:-44177513 | None:intergenic |
| CTTGAATAATTCATCAATGG+CGG | 0.613119 | 7_3:+44172876 | Msa1105580:CDS |
| TTCAAGACCATAGATGGTCG+TGG | 0.615460 | 7_3:+44176370 | Msa1105580:CDS |
| GTTATTAAATGTCGCCGGGG+TGG | 0.616534 | 7_3:+44177677 | Msa1105580:CDS |
| TATCTTGAATGACGGCGTGA+CGG | 0.616846 | 7_3:-44176279 | None:intergenic |
| AGGACAATGGCTGATGGTGA+TGG | 0.620179 | 7_3:+44176532 | Msa1105580:CDS |
| TTTGGTCGCAATGCTATCGG+TGG | 0.622293 | 7_3:+44176184 | Msa1105580:CDS |
| TCATTCAAGATAGGCCATTG+TGG | 0.624115 | 7_3:+44176290 | Msa1105580:CDS |
| TACACAATCGAGATTCGAGA+GGG | 0.624570 | 7_3:-44178180 | None:intergenic |
| TAAGCCGACTGGGAATGCTA+TGG | 0.626089 | 7_3:+44176480 | Msa1105580:CDS |
| TTTGGTACCGCCGCAGAAAG+CGG | 0.627376 | 7_3:+44176140 | Msa1105580:CDS |
| CAGGACTATACGCAATCACA+CGG | 0.632843 | 7_3:+44176045 | Msa1105580:intron |
| GGATGGAGGACAATGGCTGA+TGG | 0.643191 | 7_3:+44176526 | Msa1105580:CDS |
| TGGGTGATGTATGCTATTGG+AGG | 0.647157 | 7_3:+44177295 | Msa1105580:CDS |
| GGGTTGGAATTGGAGGTCCG+AGG | 0.647861 | 7_3:+44177526 | Msa1105580:CDS |
| TGCTAGAGCCTCAAGTTTAG+GGG | 0.654577 | 7_3:+44177610 | Msa1105580:CDS |
| CAACGTAGTACCTTCCGTCA+CGG | 0.656117 | 7_3:-44176207 | None:intergenic |
| ACAGGGTCCGGAGTATGGAA+GGG | 0.658271 | 7_3:+44177506 | Msa1105580:CDS |
| GAATTATTACGTATCAACCA+TGG | 0.659930 | 7_3:-44173224 | None:intergenic |
| GTCAAAAGACCATACAGCAG+AGG | 0.662961 | 7_3:-44178140 | None:intergenic |
| CTCTTGAACACAATCCACAA+TGG | 0.663084 | 7_3:-44176304 | None:intergenic |
| TGGACAGGTGACAAAGAGGG+TGG | 0.664985 | 7_3:+44177481 | Msa1105580:intron |
| GAACCCACAATTAACAGCCA+AGG | 0.665968 | 7_3:+44177325 | Msa1105580:CDS |
| GAATATTGCAGATGTAGACA+CGG | 0.668694 | 7_3:+44177238 | Msa1105580:intron |
| AGCATTGCGACCAAAACCAA+TGG | 0.669104 | 7_3:-44176176 | None:intergenic |
| ACTGTTGACAAGATAAACAG+TGG | 0.669346 | 7_3:-44177923 | None:intergenic |
| GTTATTGGAAACGGTAATGG+CGG | 0.672422 | 7_3:-44176647 | None:intergenic |
| GACACCATGGATGATGACAT+TGG | 0.680615 | 7_3:-44176443 | None:intergenic |
| AATATTGCAGATGTAGACAC+GGG | 0.684120 | 7_3:+44177239 | Msa1105580:intron |
| CTGTTGACAAGATAAACAGT+GGG | 0.691709 | 7_3:-44177922 | None:intergenic |
| ATGTGGACAGGTGACAAAGA+GGG | 0.696684 | 7_3:+44177478 | Msa1105580:intron |
| CGAACCATAGCATTCCCAGT+CGG | 0.703490 | 7_3:-44176484 | None:intergenic |
| ATACACAATCGAGATTCGAG+AGG | 0.705670 | 7_3:-44178181 | None:intergenic |
| GCATGCAGTTGATAATCCAG+AGG | 0.706876 | 7_3:+44173192 | Msa1105580:CDS |
| GATGTGGACAGGTGACAAAG+AGG | 0.712511 | 7_3:+44177477 | Msa1105580:intron |
| TATAGTCATTGTTTACCACG+TGG | 0.716427 | 7_3:-44177267 | None:intergenic |
| TTTGGCAAAAGGGTTCTGAG+GGG | 0.747633 | 7_3:-44177362 | None:intergenic |
| GGTGTTATTAAATGTCGCCG+GGG | 0.749848 | 7_3:+44177674 | Msa1105580:CDS |
| GATTGTGTTCAAGAGAGACA+TGG | 0.751862 | 7_3:+44176312 | Msa1105580:CDS |
| CTACTTCACCCACCACAACG+AGG | 0.767107 | 7_3:+44176669 | Msa1105580:CDS |
| ACACAATCGAGATTCGAGAG+GGG | 0.783532 | 7_3:-44178179 | None:intergenic |
| TAGACACGGGTATTTCCACG+TGG | 0.797672 | 7_3:+44177252 | Msa1105580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAATAATTAAATTAA+AGG | - | chr7_3:44173260-44173279 | None:intergenic | 0.0% |
| !!! | TATTTTGTAATGATTAAAAT+CGG | + | chr7_3:44172965-44172984 | Msa1105580:intron | 10.0% |
| !! | ATAAATAATTAAATTAAAGG+AGG | - | chr7_3:44173257-44173276 | None:intergenic | 10.0% |
| !! | TTATAATTAATGACATTTAT+AGG | + | chr7_3:44174140-44174159 | Msa1105580:intron | 10.0% |
| !! | TCATATTAAAAAAATAGAAA+AGG | - | chr7_3:44174930-44174949 | None:intergenic | 10.0% |
| !! | AAAATCAAAATTAAACTGAA+CGG | - | chr7_3:44173132-44173151 | None:intergenic | 15.0% |
| !! | CAAATAAAAAAAAATTGAGT+TGG | + | chr7_3:44173424-44173443 | Msa1105580:intron | 15.0% |
| !!! | TTTTTTCATCAAAATTAATC+AGG | - | chr7_3:44173914-44173933 | None:intergenic | 15.0% |
| !! | TATTAATTATATAAAACCAG+AGG | - | chr7_3:44174395-44174414 | None:intergenic | 15.0% |
| !! | ATCTAAATCTATCAATAAAA+AGG | - | chr7_3:44174732-44174751 | None:intergenic | 15.0% |
| !!! | TAACTTCTAAAATTTTTAGT+AGG | + | chr7_3:44175272-44175291 | Msa1105580:intron | 15.0% |
| !! | AATATATCTAGAAAATGTTA+TGG | - | chr7_3:44175506-44175525 | None:intergenic | 15.0% |
| !!! | AACATTTTCTAGATATATTT+TGG | + | chr7_3:44175507-44175526 | Msa1105580:intron | 15.0% |
| !!! | ATACTTGTTAAATTTTAAAC+AGG | + | chr7_3:44176026-44176045 | Msa1105580:intron | 15.0% |
| !!! | TTATTTTTTTTCCTTTTTGA+AGG | + | chr7_3:44176981-44177000 | Msa1105580:intron | 15.0% |
| !!! | TTTAGTACTAGTATTTATTT+TGG | + | chr7_3:44177014-44177033 | Msa1105580:intron | 15.0% |
| !!! | TTAGTACTAGTATTTATTTT+GGG | + | chr7_3:44177015-44177034 | Msa1105580:intron | 15.0% |
| !!! | ATTGAGTTGGATTATTTTTT+TGG | + | chr7_3:44173437-44173456 | Msa1105580:intron | 20.0% |
| !! | GATTCACAACAAATTATAAA+TGG | - | chr7_3:44173781-44173800 | None:intergenic | 20.0% |
| !! | TAATATATCATTCCAAAAAG+AGG | - | chr7_3:44173803-44173822 | None:intergenic | 20.0% |
| !! | CATAAAAAAACATTTGGAAA+TGG | - | chr7_3:44173830-44173849 | None:intergenic | 20.0% |
| !!! | CATTTCCAAATGTTTTTTTA+TGG | + | chr7_3:44173828-44173847 | Msa1105580:intron | 20.0% |
| !! | TTTCACCATAAAAAAACATT+TGG | - | chr7_3:44173836-44173855 | None:intergenic | 20.0% |
| !!! | ATTTTGATGAAAAAATGAGT+TGG | + | chr7_3:44173919-44173938 | Msa1105580:intron | 20.0% |
| !! | TTTCAAAATAAATATCACCA+TGG | + | chr7_3:44174172-44174191 | Msa1105580:intron | 20.0% |
| !! | AATATAAAGGTCATCAAATA+GGG | - | chr7_3:44174293-44174312 | None:intergenic | 20.0% |
| !!! | AAAAGCATCAAAGAATATAA+AGG | - | chr7_3:44174306-44174325 | None:intergenic | 20.0% |
| !!! | TTTAAAATGACTCTAGTAAA+AGG | - | chr7_3:44174351-44174370 | None:intergenic | 20.0% |
| !! | ACTCAATCTAAACTTAATTA+TGG | + | chr7_3:44174962-44174981 | Msa1105580:intron | 20.0% |
| !!! | ATAATTCTAAAAACATCATG+AGG | - | chr7_3:44175042-44175061 | None:intergenic | 20.0% |
| !! | TAGAGAAAATTGAAATATGA+TGG | + | chr7_3:44175686-44175705 | Msa1105580:intron | 20.0% |
| !! | TTATTATTGATGTATGTTGA+GGG | - | chr7_3:44175802-44175821 | None:intergenic | 20.0% |
| !! | ATTATTATTGATGTATGTTG+AGG | - | chr7_3:44175803-44175822 | None:intergenic | 20.0% |
| !! | AAAATTGTCCCTAAAATTAT+TGG | + | chr7_3:44175930-44175949 | Msa1105580:intron | 20.0% |
| !!! | AATTCGTACCAATAATTTTA+GGG | - | chr7_3:44175941-44175960 | None:intergenic | 20.0% |
| !!! | TAATTCGTACCAATAATTTT+AGG | - | chr7_3:44175942-44175961 | None:intergenic | 20.0% |
| !! | TAAAAAGGTAGTATTAGAAA+AGG | - | chr7_3:44176757-44176776 | None:intergenic | 20.0% |
| !! | ATAAATACTAGTACTAAAAC+TGG | - | chr7_3:44177012-44177031 | None:intergenic | 20.0% |
| !! | TGATGAACTTTACTAAATAT+TGG | + | chr7_3:44177447-44177466 | Msa1105580:intron | 20.0% |
| !! | AAATATTGGAAAATTTGATG+TGG | + | chr7_3:44177461-44177480 | Msa1105580:intron | 20.0% |
| !! | GAATTAAAAAAGAAAAGAAG+AGG | + | chr7_3:44177771-44177790 | Msa1105580:three_prime_UTR | 20.0% |
| !! | TATAACAATGCAATAATAAG+AGG | - | chr7_3:44177849-44177868 | None:intergenic | 20.0% |
| !!! | AAAATAAATTTTGAATCCCT+TGG | - | chr7_3:44178081-44178100 | None:intergenic | 20.0% |
| !! | TAGAAACAAAAAGAAACTAA+GGG | - | chr7_3:44178113-44178132 | None:intergenic | 20.0% |
| !! | ATAGAAACAAAAAGAAACTA+AGG | - | chr7_3:44178114-44178133 | None:intergenic | 20.0% |
| !!! | TCAAGTGTTTTCTAAATAAA+TGG | - | chr7_3:44178212-44178231 | None:intergenic | 20.0% |
| !!! | TTAAGCTGCATATTTTTATC+CGG | + | chr7_3:44173331-44173350 | Msa1105580:intron | 25.0% |
| ! | ACAATTAGATGTGCTTAATA+TGG | + | chr7_3:44173707-44173726 | Msa1105580:intron | 25.0% |
| !!! | ATGTTTTTTTATGGTGAAAG+TGG | + | chr7_3:44173837-44173856 | Msa1105580:intron | 25.0% |
| !! | ATCAAGGATGCATAAATTTT+GGG | - | chr7_3:44174076-44174095 | None:intergenic | 25.0% |
| !! | TATCAAGGATGCATAAATTT+TGG | - | chr7_3:44174077-44174096 | None:intergenic | 25.0% |
| ! | TAAATATCACCATGGAAAAA+CGG | + | chr7_3:44174180-44174199 | Msa1105580:intron | 25.0% |
| ! | ACAATTTCTAACTTTCTTGA+CGG | - | chr7_3:44174208-44174227 | None:intergenic | 25.0% |
| ! | AAATTGTATGAGTAATTGCA+TGG | + | chr7_3:44174221-44174240 | Msa1105580:intron | 25.0% |
| ! | AATTGTATGAGTAATTGCAT+GGG | + | chr7_3:44174222-44174241 | Msa1105580:intron | 25.0% |
| !! | GAATTTTAAATACTACTGCA+TGG | - | chr7_3:44174271-44174290 | None:intergenic | 25.0% |
| ! | GAATATAAAGGTCATCAAAT+AGG | - | chr7_3:44174294-44174313 | None:intergenic | 25.0% |
| ! | AGAATAATTTAATTCTCCTC+TGG | + | chr7_3:44174376-44174395 | Msa1105580:intron | 25.0% |
| ! | GAAATTTATTATGACCGAAA+TGG | - | chr7_3:44174577-44174596 | None:intergenic | 25.0% |
| ! | AAAGATGTTTGTACTTGTAA+AGG | - | chr7_3:44174637-44174656 | None:intergenic | 25.0% |
| !! | AATTATTGGGTCTTTGTTTA+TGG | + | chr7_3:44174897-44174916 | Msa1105580:intron | 25.0% |
| ! | AAGTTTAGATTGAGTAGAAA+GGG | - | chr7_3:44174957-44174976 | None:intergenic | 25.0% |
| ! | TAAGTTTAGATTGAGTAGAA+AGG | - | chr7_3:44174958-44174977 | None:intergenic | 25.0% |
| ! | ATCTAAACTTAATTATGGCT+AGG | + | chr7_3:44174967-44174986 | Msa1105580:intron | 25.0% |
| ! | TCTAAACTTAATTATGGCTA+GGG | + | chr7_3:44174968-44174987 | Msa1105580:intron | 25.0% |
| ! | AGGTATAAAAAGACAAACAA+GGG | - | chr7_3:44175074-44175093 | None:intergenic | 25.0% |
| ! | GTCTAATCAGAAATTTATGT+GGG | - | chr7_3:44175097-44175116 | None:intergenic | 25.0% |
| ! | AGTCTAATCAGAAATTTATG+TGG | - | chr7_3:44175098-44175117 | None:intergenic | 25.0% |
| !! | GAAGAGTGATTTACTAATTT+TGG | - | chr7_3:44175186-44175205 | None:intergenic | 25.0% |
| !!! | TTTTCTAGATATATTTTGGC+TGG | + | chr7_3:44175511-44175530 | Msa1105580:intron | 25.0% |
| ! | TGGTCATTTAATAAGTTCAT+GGG | - | chr7_3:44175571-44175590 | None:intergenic | 25.0% |
| ! | TTGGTCATTTAATAAGTTCA+TGG | - | chr7_3:44175572-44175591 | None:intergenic | 25.0% |
| ! | TTATTAAATGACCAAGATTC+AGG | + | chr7_3:44175577-44175596 | Msa1105580:intron | 25.0% |
| ! | ATTATTAACTTCCTGAATCT+TGG | - | chr7_3:44175591-44175610 | None:intergenic | 25.0% |
| ! | TTACTTAAGATAATGAAGGA+GGG | - | chr7_3:44176709-44176728 | None:intergenic | 25.0% |
| !! | GTTGTTACTTAAGATAATGA+AGG | - | chr7_3:44176713-44176732 | None:intergenic | 25.0% |
| ! | AATTGAGTTCAAAATGATAC+AGG | + | chr7_3:44176830-44176849 | Msa1105580:intron | 25.0% |
| ! | ATGATACAGGTTATGTTATT+AGG | + | chr7_3:44176843-44176862 | Msa1105580:intron | 25.0% |
| ! | ATGAGAAGTCTACTAAAATT+GGG | + | chr7_3:44177073-44177092 | Msa1105580:intron | 25.0% |
| ! | TAAACAATGACTATACACAT+TGG | + | chr7_3:44177275-44177294 | Msa1105580:CDS | 25.0% |
| ! | AAACAATGACTATACACATT+GGG | + | chr7_3:44177276-44177295 | Msa1105580:CDS | 25.0% |
| !!! | TTCTTTTTTTCAGTTTGCTT+GGG | - | chr7_3:44177754-44177773 | None:intergenic | 25.0% |
| !!! | ATTCTTTTTTTCAGTTTGCT+TGG | - | chr7_3:44177755-44177774 | None:intergenic | 25.0% |
| ! | TTGCATTGTTATAGTAGATT+TGG | + | chr7_3:44177856-44177875 | Msa1105580:three_prime_UTR | 25.0% |
| ! | TTGTTATAGTAGATTTGGAT+TGG | + | chr7_3:44177861-44177880 | Msa1105580:three_prime_UTR | 25.0% |
| ! | AGAAACAAAAAGAAACTAAG+GGG | - | chr7_3:44178112-44178131 | None:intergenic | 25.0% |
| !! | GAATGTATTGATCAAATAGT+TGG | + | chr7_3:44178258-44178277 | Msa1105580:three_prime_UTR | 25.0% |
| ! | TTCTTTCGTTTTCTGTGTTT+TGG | - | chr7_3:44172558-44172577 | None:intergenic | 30.0% |
| AAAACAGAGTTAAGCAACAA+TGG | + | chr7_3:44172576-44172595 | Msa1105580:exon | 30.0% | |
| GAGCTTGAATAATTCATCAA+TGG | + | chr7_3:44172873-44172892 | Msa1105580:CDS | 30.0% | |
| CTTGAATAATTCATCAATGG+CGG | + | chr7_3:44172876-44172895 | Msa1105580:CDS | 30.0% | |
| TGCAGATAATTCTAATCCAA+CGG | - | chr7_3:44173021-44173040 | None:intergenic | 30.0% | |
| ! | TGCATTTTCAGCTTAAGTAA+TGG | + | chr7_3:44173157-44173176 | Msa1105580:intron | 30.0% |
| GAATTATTACGTATCAACCA+TGG | - | chr7_3:44173227-44173246 | None:intergenic | 30.0% | |
| ! | TTTTTATCCGGATTTGAATC+TGG | + | chr7_3:44173343-44173362 | Msa1105580:intron | 30.0% |
| CATTTAATTGATCATGTGCA+TGG | + | chr7_3:44173500-44173519 | Msa1105580:intron | 30.0% | |
| ! | GTATTTTCTTCCTCTGTTTT+TGG | + | chr7_3:44173537-44173556 | Msa1105580:intron | 30.0% |
| AATACAAACTAAAGCCAAGT+GGG | - | chr7_3:44173630-44173649 | None:intergenic | 30.0% | |
| AAATACAAACTAAAGCCAAG+TGG | - | chr7_3:44173631-44173650 | None:intergenic | 30.0% | |
| !! | TTTGTTGTGAATCCTCTTTT+TGG | + | chr7_3:44173788-44173807 | Msa1105580:intron | 30.0% |
| ATTTATGCATCCTTGATACA+AGG | + | chr7_3:44174079-44174098 | Msa1105580:intron | 30.0% | |
| AGCTGGCAAATAAAATATTC+TGG | - | chr7_3:44174525-44174544 | None:intergenic | 30.0% | |
| TTTATTATGACCGAAATGGT+CGG | - | chr7_3:44174573-44174592 | None:intergenic | 30.0% | |
| ! | GTAAAGGCAATTTTCAGATA+AGG | - | chr7_3:44174621-44174640 | None:intergenic | 30.0% |
| ! | AGTCATGAAGATTGGATTTT+AGG | - | chr7_3:44174671-44174690 | None:intergenic | 30.0% |
| CCACTATACAAGAAATGAAA+GGG | - | chr7_3:44174786-44174805 | None:intergenic | 30.0% | |
| ACCACTATACAAGAAATGAA+AGG | - | chr7_3:44174787-44174806 | None:intergenic | 30.0% | |
| CTAAACTTAATTATGGCTAG+GGG | + | chr7_3:44174969-44174988 | Msa1105580:intron | 30.0% | |
| GAGGTATAAAAAGACAAACA+AGG | - | chr7_3:44175075-44175094 | None:intergenic | 30.0% | |
| TAATCAGAAATTTATGTGGG+AGG | - | chr7_3:44175094-44175113 | None:intergenic | 30.0% | |
| CATAAATCTTACACGTTACA+GGG | + | chr7_3:44175140-44175159 | Msa1105580:intron | 30.0% | |
| ! | TTGTGTGTTACTGATTACTT+TGG | + | chr7_3:44175306-44175325 | Msa1105580:intron | 30.0% |
| ! | TGTGTGTTACTGATTACTTT+GGG | + | chr7_3:44175307-44175326 | Msa1105580:intron | 30.0% |
| GTCATTTAATAAGTTCATGG+GGG | - | chr7_3:44175569-44175588 | None:intergenic | 30.0% | |
| GGTCATTTAATAAGTTCATG+GGG | - | chr7_3:44175570-44175589 | None:intergenic | 30.0% | |
| TACAATAAATGCCAAGTTAG+GGG | - | chr7_3:44175665-44175684 | None:intergenic | 30.0% | |
| CTACAATAAATGCCAAGTTA+GGG | - | chr7_3:44175666-44175685 | None:intergenic | 30.0% | |
| ACTACAATAAATGCCAAGTT+AGG | - | chr7_3:44175667-44175686 | None:intergenic | 30.0% | |
| ATAGAATGATACGGTGTATA+CGG | - | chr7_3:44175733-44175752 | None:intergenic | 30.0% | |
| !! | ATTCAGTCCTTTAAGACAAA+CGG | + | chr7_3:44175874-44175893 | Msa1105580:intron | 30.0% |
| AAATTACCCGTTTGTCTTAA+AGG | - | chr7_3:44175884-44175903 | None:intergenic | 30.0% | |
| GTTACTTAAGATAATGAAGG+AGG | - | chr7_3:44176710-44176729 | None:intergenic | 30.0% | |
| CATGAGAAGTCTACTAAAAT+TGG | + | chr7_3:44177072-44177091 | Msa1105580:intron | 30.0% | |
| AGAACTAGACAGAGAATTTA+TGG | - | chr7_3:44177195-44177214 | None:intergenic | 30.0% | |
| AAAAAGCTCCATTTAGCAAA+AGG | - | chr7_3:44177556-44177575 | None:intergenic | 30.0% | |
| TCCAACTAAAGAAGATGATT+TGG | - | chr7_3:44177636-44177655 | None:intergenic | 30.0% | |
| ! | GAAAGAAAAGCATAAAGGAA+TGG | + | chr7_3:44177797-44177816 | Msa1105580:three_prime_UTR | 30.0% |
| ! | TCTTGTCAACAGTTAGATTT+TGG | + | chr7_3:44177933-44177952 | Msa1105580:three_prime_UTR | 30.0% |
| ! | CTTGTCAACAGTTAGATTTT+GGG | + | chr7_3:44177934-44177953 | Msa1105580:three_prime_UTR | 30.0% |
| ! | ATGAGAACTGTTGTTGTTAT+TGG | + | chr7_3:44177975-44177994 | Msa1105580:three_prime_UTR | 30.0% |
| ! | ATTTCCCTCTAATTTTCCAA+GGG | + | chr7_3:44178062-44178081 | Msa1105580:three_prime_UTR | 30.0% |
| GTTAAGCAACAATGGAGTTA+CGG | + | chr7_3:44172584-44172603 | Msa1105580:exon | 35.0% | |
| GTCGTTATGATCAATAGCAT+TGG | - | chr7_3:44172665-44172684 | None:intergenic | 35.0% | |
| CTATTGATCATAACGACTCA+AGG | + | chr7_3:44172668-44172687 | Msa1105580:CDS | 35.0% | |
| ! | CATGATGATAGTGTTGTGAA+TGG | + | chr7_3:44172829-44172848 | Msa1105580:intron | 35.0% |
| ! | ATAATTCATCAATGGCGGAA+AGG | + | chr7_3:44172881-44172900 | Msa1105580:CDS | 35.0% |
| !! | ATAAAGGTGTTGATAACCGT+TGG | + | chr7_3:44173002-44173021 | Msa1105580:intron | 35.0% |
| TCGACATTGTCTGATGAAAT+AGG | - | chr7_3:44173306-44173325 | None:intergenic | 35.0% | |
| TTACGATCCAGATTCAAATC+CGG | - | chr7_3:44173353-44173372 | None:intergenic | 35.0% | |
| TTCTCAAAAGCCAAAAACAG+AGG | - | chr7_3:44173550-44173569 | None:intergenic | 35.0% | |
| !!! | TGTTTTTGGCTTTTGAGAAG+AGG | + | chr7_3:44173551-44173570 | Msa1105580:intron | 35.0% |
| CATATCTGATCCTTGTATCA+AGG | - | chr7_3:44174092-44174111 | None:intergenic | 35.0% | |
| CATGGTCTGTAATAAATGGT+GGG | - | chr7_3:44174253-44174272 | None:intergenic | 35.0% | |
| ACTGCATGGTCTGTAATAAA+TGG | - | chr7_3:44174257-44174276 | None:intergenic | 35.0% | |
| ! | GATTGATTCATTAAGCACCA+TGG | - | chr7_3:44174463-44174482 | None:intergenic | 35.0% |
| GTGATTGAAGTCATGAAGAT+TGG | - | chr7_3:44174679-44174698 | None:intergenic | 35.0% | |
| CCCTTTCATTTCTTGTATAG+TGG | + | chr7_3:44174783-44174802 | Msa1105580:intron | 35.0% | |
| TACTTTCTCCTATGTTTCTC+TGG | + | chr7_3:44174848-44174867 | Msa1105580:intron | 35.0% | |
| TTCGTAAACCAGAGAAACAT+AGG | - | chr7_3:44174859-44174878 | None:intergenic | 35.0% | |
| CCTGTAACGTGTAAGATTTA+TGG | - | chr7_3:44175142-44175161 | None:intergenic | 35.0% | |
| CCATAAATCTTACACGTTAC+AGG | + | chr7_3:44175139-44175158 | Msa1105580:intron | 35.0% | |
| ATCACTCTTCAGTAGTCAAA+AGG | + | chr7_3:44175196-44175215 | Msa1105580:intron | 35.0% | |
| TCACTCTTCAGTAGTCAAAA+GGG | + | chr7_3:44175197-44175216 | Msa1105580:intron | 35.0% | |
| !!! | ACTCTGTTTTTGGTTCTTTC+AGG | - | chr7_3:44175348-44175367 | None:intergenic | 35.0% |
| ! | GGGTTTATGAACTCTGTTTT+TGG | - | chr7_3:44175358-44175377 | None:intergenic | 35.0% |
| GTTCATAAACCCAGACTATT+AGG | + | chr7_3:44175366-44175385 | Msa1105580:intron | 35.0% | |
| GCATGAATTCCTAATAGTCT+GGG | - | chr7_3:44175378-44175397 | None:intergenic | 35.0% | |
| TGCATGAATTCCTAATAGTC+TGG | - | chr7_3:44175379-44175398 | None:intergenic | 35.0% | |
| AGGATACGGATAGAATGATA+CGG | - | chr7_3:44175742-44175761 | None:intergenic | 35.0% | |
| TGGGTCAACAATTAAGGATA+CGG | - | chr7_3:44175756-44175775 | None:intergenic | 35.0% | |
| !! | TTCAGTCCTTTAAGACAAAC+GGG | + | chr7_3:44175875-44175894 | Msa1105580:intron | 35.0% |
| !!! | AGTCTGAGTTTTTTCTCATG+TGG | + | chr7_3:44176076-44176095 | Msa1105580:CDS | 35.0% |
| !!! | GTCTGAGTTTTTTCTCATGT+GGG | + | chr7_3:44176077-44176096 | Msa1105580:CDS | 35.0% |
| CATGATCAATTCTTGCTTCA+GGG | - | chr7_3:44176344-44176363 | None:intergenic | 35.0% | |
| TCATGATCAATTCTTGCTTC+AGG | - | chr7_3:44176345-44176364 | None:intergenic | 35.0% | |
| AACAGTTTCAAGACCATAGA+TGG | + | chr7_3:44176364-44176383 | Msa1105580:CDS | 35.0% | |
| TCCAAAGGCAATATGAACAT+TGG | - | chr7_3:44176398-44176417 | None:intergenic | 35.0% | |
| AATAGTAATGCATGCTCCAA+AGG | - | chr7_3:44176413-44176432 | None:intergenic | 35.0% | |
| AATATGACTGGAACCAAAGA+TGG | - | chr7_3:44176563-44176582 | None:intergenic | 35.0% | |
| ! | TCTTTGGTTCCAGTCATATT+TGG | + | chr7_3:44176563-44176582 | Msa1105580:CDS | 35.0% |
| GTGATCAATCCAAATATGAC+TGG | - | chr7_3:44176575-44176594 | None:intergenic | 35.0% | |
| !! | TGGTCTTGTTGATGCTATTA+TGG | + | chr7_3:44176618-44176637 | Msa1105580:CDS | 35.0% |
| !! | GGTCTTGTTGATGCTATTAT+GGG | + | chr7_3:44176619-44176638 | Msa1105580:CDS | 35.0% |
| GTAGTTATTGGAAACGGTAA+TGG | - | chr7_3:44176653-44176672 | None:intergenic | 35.0% | |
| GGTGAAGTAGTTATTGGAAA+CGG | - | chr7_3:44176659-44176678 | None:intergenic | 35.0% | |
| ! | ACCATTGCATACAACCATTT+TGG | + | chr7_3:44176906-44176925 | Msa1105580:CDS | 35.0% |
| ! | CCATTGCATACAACCATTTT+GGG | + | chr7_3:44176907-44176926 | Msa1105580:CDS | 35.0% |
| ! | CATTGCATACAACCATTTTG+GGG | + | chr7_3:44176908-44176927 | Msa1105580:CDS | 35.0% |
| AATGTTACTGCTAGTTACCT+TGG | - | chr7_3:44176954-44176973 | None:intergenic | 35.0% | |
| ACTTCTCATGTCAAATAGAG+AGG | - | chr7_3:44177062-44177081 | None:intergenic | 35.0% | |
| ATGACAACTAGACCTCTTTA+TGG | + | chr7_3:44177101-44177120 | Msa1105580:intron | 35.0% | |
| ! | AACACTCTTTAGAAGAACAG+AGG | - | chr7_3:44177158-44177177 | None:intergenic | 35.0% |
| !! | TCTAGTTCTTGCACTAACAA+TGG | + | chr7_3:44177206-44177225 | Msa1105580:intron | 35.0% |
| GAATATTGCAGATGTAGACA+CGG | + | chr7_3:44177238-44177257 | Msa1105580:intron | 35.0% | |
| AATATTGCAGATGTAGACAC+GGG | + | chr7_3:44177239-44177258 | Msa1105580:intron | 35.0% | |
| TATAGTCATTGTTTACCACG+TGG | - | chr7_3:44177270-44177289 | None:intergenic | 35.0% | |
| ATGTTACCTCTTTGGCAAAA+GGG | - | chr7_3:44177375-44177394 | None:intergenic | 35.0% | |
| AATGTTACCTCTTTGGCAAA+AGG | - | chr7_3:44177376-44177395 | None:intergenic | 35.0% | |
| TCGTAAGAATGTTACCTCTT+TGG | - | chr7_3:44177383-44177402 | None:intergenic | 35.0% | |
| TTGGAAAATTTGATGTGGAC+AGG | + | chr7_3:44177466-44177485 | Msa1105580:intron | 35.0% | |
| GCCAAATCATCTTCTTTAGT+TGG | + | chr7_3:44177632-44177651 | Msa1105580:CDS | 35.0% | |
| TTAGTTGGAACTTTAACTGC+AGG | + | chr7_3:44177647-44177666 | Msa1105580:CDS | 35.0% | |
| ATCAACAACCAAACGAGTAA+AGG | + | chr7_3:44177721-44177740 | Msa1105580:three_prime_UTR | 35.0% | |
| TCAACAACCAAACGAGTAAA+GGG | + | chr7_3:44177722-44177741 | Msa1105580:three_prime_UTR | 35.0% | |
| ! | GGAGAGAAAGAAAAGCATAA+AGG | + | chr7_3:44177792-44177811 | Msa1105580:three_prime_UTR | 35.0% |
| CTGTTGACAAGATAAACAGT+GGG | - | chr7_3:44177925-44177944 | None:intergenic | 35.0% | |
| ACTGTTGACAAGATAAACAG+TGG | - | chr7_3:44177926-44177945 | None:intergenic | 35.0% | |
| TAATCTCCAAAAGTGAGAGA+TGG | - | chr7_3:44178026-44178045 | None:intergenic | 35.0% | |
| !! | CTCTCACTTTTGGAGATTAT+TGG | + | chr7_3:44178027-44178046 | Msa1105580:three_prime_UTR | 35.0% |
| ! | GATTTCCCTCTAATTTTCCA+AGG | + | chr7_3:44178061-44178080 | Msa1105580:three_prime_UTR | 35.0% |
| GAATCCCTTGGAAAATTAGA+GGG | - | chr7_3:44178069-44178088 | None:intergenic | 35.0% | |
| TGAATCCCTTGGAAAATTAG+AGG | - | chr7_3:44178070-44178089 | None:intergenic | 35.0% | |
| CAAAAAGAAACTAAGGGGAA+GGG | - | chr7_3:44178107-44178126 | None:intergenic | 35.0% | |
| ACAAAAAGAAACTAAGGGGA+AGG | - | chr7_3:44178108-44178127 | None:intergenic | 35.0% | |
| TATATGTATCCTCTGCTGTA+TGG | + | chr7_3:44178131-44178150 | Msa1105580:intron | 35.0% | |
| TTGATCTGTCCCAAATGAAA+TGG | + | chr7_3:44178228-44178247 | Msa1105580:three_prime_UTR | 35.0% | |
| TGATCTGTCCCAAATGAAAT+GGG | + | chr7_3:44178229-44178248 | Msa1105580:three_prime_UTR | 35.0% | |
| TCCTATTGCCCATTTCATTT+GGG | - | chr7_3:44178240-44178259 | None:intergenic | 35.0% | |
| TTCCTATTGCCCATTTCATT+TGG | - | chr7_3:44178241-44178260 | None:intergenic | 35.0% | |
| !! | TTTGGTGTCGTGTGAGAAAA+AGG | - | chr7_3:44172540-44172559 | None:intergenic | 40.0% |
| GCAAACAGTATATTTGCCGT+CGG | + | chr7_3:44173081-44173100 | Msa1105580:intron | 40.0% | |
| GCTTAATATGGTCCCATTAG+CGG | + | chr7_3:44173719-44173738 | Msa1105580:intron | 40.0% | |
| ATCACAATGCAACCGCTAAT+GGG | - | chr7_3:44173734-44173753 | None:intergenic | 40.0% | |
| GTATGAGTAATTGCATGGGT+AGG | + | chr7_3:44174226-44174245 | Msa1105580:intron | 40.0% | |
| GCATGGTCTGTAATAAATGG+TGG | - | chr7_3:44174254-44174273 | None:intergenic | 40.0% | |
| GATTCATTAAGCACCATGGA+AGG | - | chr7_3:44174459-44174478 | None:intergenic | 40.0% | |
| ATCGCCATGTTCTTTGCATA+TGG | + | chr7_3:44174480-44174499 | Msa1105580:intron | 40.0% | |
| TCGCCATGTTCTTTGCATAT+GGG | + | chr7_3:44174481-44174500 | Msa1105580:intron | 40.0% | |
| GATCCCATATGCAAAGAACA+TGG | - | chr7_3:44174487-44174506 | None:intergenic | 40.0% | |
| ACATTAGCATGTGGTTAAGC+TGG | - | chr7_3:44174542-44174561 | None:intergenic | 40.0% | |
| GATCTCAGAACATTAGCATG+TGG | - | chr7_3:44174551-44174570 | None:intergenic | 40.0% | |
| CCAAGACATGTGTTTAAGAG+GGG | - | chr7_3:44174810-44174829 | None:intergenic | 40.0% | |
| GCCAAGACATGTGTTTAAGA+GGG | - | chr7_3:44174811-44174830 | None:intergenic | 40.0% | |
| CTCTTAAACACATGTCTTGG+CGG | + | chr7_3:44174810-44174829 | Msa1105580:intron | 40.0% | |
| GGGACACATTTCAGTATTCA+GGG | + | chr7_3:44174989-44175008 | Msa1105580:intron | 40.0% | |
| ACAAAGGTAGCACATTCATG+TGG | - | chr7_3:44175439-44175458 | None:intergenic | 40.0% | |
| ACAGGCTGTAGAAACTACAA+AGG | - | chr7_3:44175455-44175474 | None:intergenic | 40.0% | |
| !!! | TTAGGGGAGATCTAGTTTTG+GGG | - | chr7_3:44175649-44175668 | None:intergenic | 40.0% |
| !!! | GTTAGGGGAGATCTAGTTTT+GGG | - | chr7_3:44175650-44175669 | None:intergenic | 40.0% |
| !! | AGTTAGGGGAGATCTAGTTT+TGG | - | chr7_3:44175651-44175670 | None:intergenic | 40.0% |
| AAACTAGATCTCCCCTAACT+TGG | + | chr7_3:44175651-44175670 | Msa1105580:intron | 40.0% | |
| GTCATGTGGGTCAACAATTA+AGG | - | chr7_3:44175762-44175781 | None:intergenic | 40.0% | |
| !!! | AGTTTTTTCTCATGTGGGAC+TGG | + | chr7_3:44176082-44176101 | Msa1105580:CDS | 40.0% |
| CAATGGCCTATCTTGAATGA+CGG | - | chr7_3:44176290-44176309 | None:intergenic | 40.0% | |
| TCATTCAAGATAGGCCATTG+TGG | + | chr7_3:44176290-44176309 | Msa1105580:CDS | 40.0% | |
| CTCTTGAACACAATCCACAA+TGG | - | chr7_3:44176307-44176326 | None:intergenic | 40.0% | |
| GATTGTGTTCAAGAGAGACA+TGG | + | chr7_3:44176312-44176331 | Msa1105580:CDS | 40.0% | |
| GCCAATGTTCATATTGCCTT+TGG | + | chr7_3:44176394-44176413 | Msa1105580:CDS | 40.0% | |
| ATCACCAATGTCATCATCCA+TGG | + | chr7_3:44176439-44176458 | Msa1105580:CDS | 40.0% | |
| AATCATGGATATGGACACCA+TGG | - | chr7_3:44176459-44176478 | None:intergenic | 40.0% | |
| TCGGCTTACAATCATGGATA+TGG | - | chr7_3:44176468-44176487 | None:intergenic | 40.0% | |
| CATTGTCCTCCATCCAAAAT+GGG | - | chr7_3:44176521-44176540 | None:intergenic | 40.0% | |
| ! | GTTATTGGAAACGGTAATGG+CGG | - | chr7_3:44176650-44176669 | None:intergenic | 40.0% |
| TCAATTTACCTCGTTGTGGT+GGG | - | chr7_3:44176680-44176699 | None:intergenic | 40.0% | |
| AGTCTCAATTTACCTCGTTG+TGG | - | chr7_3:44176684-44176703 | None:intergenic | 40.0% | |
| CCCAAAATGGTTGTATGCAA+TGG | - | chr7_3:44176910-44176929 | None:intergenic | 40.0% | |
| AGTTGGAATGGACCATAAAG+AGG | - | chr7_3:44177116-44177135 | None:intergenic | 40.0% | |
| CATTGGGTGATGTATGCTAT+TGG | + | chr7_3:44177292-44177311 | Msa1105580:CDS | 40.0% | |
| TTGCCTTGGCTGTTAATTGT+GGG | - | chr7_3:44177331-44177350 | None:intergenic | 40.0% | |
| ATTTAGCAAAAGGTCTCCCT+CGG | - | chr7_3:44177546-44177565 | None:intergenic | 40.0% | |
| ! | TTTTTCACTCCATCAGGAAG+AGG | + | chr7_3:44177572-44177591 | Msa1105580:CDS | 40.0% |
| TATGCTAGAGCCTCAAGTTT+AGG | + | chr7_3:44177608-44177627 | Msa1105580:CDS | 40.0% | |
| ATGCTAGAGCCTCAAGTTTA+GGG | + | chr7_3:44177609-44177628 | Msa1105580:CDS | 40.0% | |
| !! | CTGGTGTTATTAAATGTCGC+CGG | + | chr7_3:44177672-44177691 | Msa1105580:CDS | 40.0% |
| !! | TGGTGTTATTAAATGTCGCC+GGG | + | chr7_3:44177673-44177692 | Msa1105580:CDS | 40.0% |
| GTTCTTTCCCTTTACTCGTT+TGG | - | chr7_3:44177732-44177751 | None:intergenic | 40.0% | |
| ! | TAGAAGCCATCTCTCACTTT+TGG | + | chr7_3:44178017-44178036 | Msa1105580:three_prime_UTR | 40.0% |
| TACACAATCGAGATTCGAGA+GGG | - | chr7_3:44178183-44178202 | None:intergenic | 40.0% | |
| ATACACAATCGAGATTCGAG+AGG | - | chr7_3:44178184-44178203 | None:intergenic | 40.0% | |
| TCCCAAATGAAATGGGCAAT+AGG | + | chr7_3:44178236-44178255 | Msa1105580:three_prime_UTR | 40.0% | |
| ! | AAGAAGCGTGATAGCGAGAA+TGG | - | chr7_3:44172632-44172651 | None:intergenic | 45.0% |
| TTAAAATCGGAGCGTACACG+TGG | + | chr7_3:44172978-44172997 | Msa1105580:intron | 45.0% | |
| ATATTTGCCGTCGGTCAGAT+CGG | + | chr7_3:44173090-44173109 | Msa1105580:intron | 45.0% | |
| !! | GCATGCAGTTGATAATCCAG+AGG | + | chr7_3:44173192-44173211 | Msa1105580:CDS | 45.0% |
| GATCACAATGCAACCGCTAA+TGG | - | chr7_3:44173735-44173754 | None:intergenic | 45.0% | |
| TCAGGCAAACACAAGAACAG+TGG | - | chr7_3:44173896-44173915 | None:intergenic | 45.0% | |
| ACGTTCGAAGTTTCCTTCCA+TGG | + | chr7_3:44174443-44174462 | Msa1105580:intron | 45.0% | |
| !! | GTTCTGAGATCCGACCATTT+CGG | + | chr7_3:44174560-44174579 | Msa1105580:intron | 45.0% |
| CCCCTCTTAAACACATGTCT+TGG | + | chr7_3:44174807-44174826 | Msa1105580:intron | 45.0% | |
| CGCCAAGACATGTGTTTAAG+AGG | - | chr7_3:44174812-44174831 | None:intergenic | 45.0% | |
| GGGGACACATTTCAGTATTC+AGG | + | chr7_3:44174988-44175007 | Msa1105580:intron | 45.0% | |
| GATGCATTGTGCTTGTAGAC+AGG | - | chr7_3:44175473-44175492 | None:intergenic | 45.0% | |
| CTACAAGCACAATGCATCTC+TGG | + | chr7_3:44175475-44175494 | Msa1105580:intron | 45.0% | |
| !!! | GAGATCTAGTTTTGGGGTGT+CGG | - | chr7_3:44175643-44175662 | None:intergenic | 45.0% |
| GTATACGGAATAACGAGGGT+TGG | - | chr7_3:44175718-44175737 | None:intergenic | 45.0% | |
| CGGTGTATACGGAATAACGA+GGG | - | chr7_3:44175722-44175741 | None:intergenic | 45.0% | |
| ACGGTGTATACGGAATAACG+AGG | - | chr7_3:44175723-44175742 | None:intergenic | 45.0% | |
| TGTATGTTGAGGGATGAGAC+TGG | - | chr7_3:44175792-44175811 | None:intergenic | 45.0% | |
| CAGGACTATACGCAATCACA+CGG | + | chr7_3:44176045-44176064 | Msa1105580:intron | 45.0% | |
| ATGTGGGACTGGAAATCCAA+TGG | + | chr7_3:44176093-44176112 | Msa1105580:CDS | 45.0% | |
| GAAATCCAATGGATGACTGC+TGG | + | chr7_3:44176104-44176123 | Msa1105580:CDS | 45.0% | |
| !!! | GCTGATTGTGCCATTGGTTT+TGG | + | chr7_3:44176166-44176185 | Msa1105580:CDS | 45.0% |
| AGCATTGCGACCAAAACCAA+TGG | - | chr7_3:44176179-44176198 | None:intergenic | 45.0% | |
| !! | GGTTTTGGTCGCAATGCTAT+CGG | + | chr7_3:44176181-44176200 | Msa1105580:CDS | 45.0% |
| TATCTTGAATGACGGCGTGA+CGG | - | chr7_3:44176282-44176301 | None:intergenic | 45.0% | |
| TTCAAGACCATAGATGGTCG+TGG | + | chr7_3:44176370-44176389 | Msa1105580:CDS | 45.0% | |
| GACACCATGGATGATGACAT+TGG | - | chr7_3:44176446-44176465 | None:intergenic | 45.0% | |
| ATCCATGATTGTAAGCCGAC+TGG | + | chr7_3:44176469-44176488 | Msa1105580:CDS | 45.0% | |
| TCCATGATTGTAAGCCGACT+GGG | + | chr7_3:44176470-44176489 | Msa1105580:CDS | 45.0% | |
| TCCTCCATCCAAAATGGGAA+GGG | - | chr7_3:44176516-44176535 | None:intergenic | 45.0% | |
| CCATTGTCCTCCATCCAAAA+TGG | - | chr7_3:44176522-44176541 | None:intergenic | 45.0% | |
| ! | CCATTTTGGATGGAGGACAA+TGG | + | chr7_3:44176519-44176538 | Msa1105580:CDS | 45.0% |
| ! | GGTGATGGCATTTCCATCTT+TGG | + | chr7_3:44176547-44176566 | Msa1105580:CDS | 45.0% |
| TCTCTGTCTAATTGCGCTGA+TGG | + | chr7_3:44176598-44176617 | Msa1105580:CDS | 45.0% | |
| !! | GTGGTGGGTGAAGTAGTTAT+TGG | - | chr7_3:44176665-44176684 | None:intergenic | 45.0% |
| CTCAATTTACCTCGTTGTGG+TGG | - | chr7_3:44176681-44176700 | None:intergenic | 45.0% | |
| !! | TGCATACAACCATTTTGGGG+AGG | + | chr7_3:44176911-44176930 | Msa1105580:CDS | 45.0% |
| !! | GCATACAACCATTTTGGGGA+GGG | + | chr7_3:44176912-44176931 | Msa1105580:CDS | 45.0% |
| GTCTTATCCAAAGGATGCCA+AGG | + | chr7_3:44176934-44176953 | Msa1105580:CDS | 45.0% | |
| CTAGTTACCTTGGCATCCTT+TGG | - | chr7_3:44176944-44176963 | None:intergenic | 45.0% | |
| AACTGGACGCTCCTTCAAAA+AGG | - | chr7_3:44176995-44177014 | None:intergenic | 45.0% | |
| CAAATAGAGAGGCTCAGCTT+AGG | - | chr7_3:44177051-44177070 | None:intergenic | 45.0% | |
| GAGACACTAGGAAGTTGGAA+TGG | - | chr7_3:44177128-44177147 | None:intergenic | 45.0% | |
| CAACTTCCTAGTGTCTCAGA+GGG | + | chr7_3:44177131-44177150 | Msa1105580:intron | 45.0% | |
| TGGGTGATGTATGCTATTGG+AGG | + | chr7_3:44177295-44177314 | Msa1105580:CDS | 45.0% | |
| GAACCCACAATTAACAGCCA+AGG | + | chr7_3:44177325-44177344 | Msa1105580:CDS | 45.0% | |
| GTTGCCTTGGCTGTTAATTG+TGG | - | chr7_3:44177332-44177351 | None:intergenic | 45.0% | |
| !! | TTTGGCAAAAGGGTTCTGAG+GGG | - | chr7_3:44177365-44177384 | None:intergenic | 45.0% |
| ! | CTTTGGCAAAAGGGTTCTGA+GGG | - | chr7_3:44177366-44177385 | None:intergenic | 45.0% |
| TCTTTGGCAAAAGGGTTCTG+AGG | - | chr7_3:44177367-44177386 | None:intergenic | 45.0% | |
| ! | TCAGAACCCTTTTGCCAAAG+AGG | + | chr7_3:44177366-44177385 | Msa1105580:CDS | 45.0% |
| ATGTGGACAGGTGACAAAGA+GGG | + | chr7_3:44177478-44177497 | Msa1105580:intron | 45.0% | |
| TGACAAAGAGGGTGGATACA+GGG | + | chr7_3:44177489-44177508 | Msa1105580:CDS | 45.0% | |
| GAGTATGGAAGGGTTGGAAT+TGG | + | chr7_3:44177516-44177535 | Msa1105580:CDS | 45.0% | |
| TATGGAAGGGTTGGAATTGG+AGG | + | chr7_3:44177519-44177538 | Msa1105580:CDS | 45.0% | |
| ! | GAGGGAGACCTTTTGCTAAA+TGG | + | chr7_3:44177545-44177564 | Msa1105580:CDS | 45.0% |
| !!! | GGAGCTTTTTTCACTCCATC+AGG | + | chr7_3:44177566-44177585 | Msa1105580:CDS | 45.0% |
| TGCTAGAGCCTCAAGTTTAG+GGG | + | chr7_3:44177610-44177629 | Msa1105580:CDS | 45.0% | |
| ! | TGATTTGGCCCCTAAACTTG+AGG | - | chr7_3:44177621-44177640 | None:intergenic | 45.0% |
| !! | GGTGTTATTAAATGTCGCCG+GGG | + | chr7_3:44177674-44177693 | Msa1105580:CDS | 45.0% |
| TGTATTAACACATGCCACCC+CGG | - | chr7_3:44177694-44177713 | None:intergenic | 45.0% | |
| GTCAAAAGACCATACAGCAG+AGG | - | chr7_3:44178143-44178162 | None:intergenic | 45.0% | |
| ! | TGTATGGTCTTTTGACCCTG+TGG | + | chr7_3:44178147-44178166 | Msa1105580:intron | 45.0% |
| ACACAATCGAGATTCGAGAG+GGG | - | chr7_3:44178182-44178201 | None:intergenic | 45.0% | |
| !!! | TAATTATAATTTTAATGAAA+TGG | - | chr7_3:44174129-44174148 | None:intergenic | 5.0% |
| !! | ATACAATAAATTATAATTAT+TGG | + | chr7_3:44174883-44174902 | Msa1105580:intron | 5.0% |
| !! | TACAATAAATTATAATTATT+GGG | + | chr7_3:44174884-44174903 | Msa1105580:intron | 5.0% |
| !! | TGATATAAAATTAATTAAAA+AGG | - | chr7_3:44176772-44176791 | None:intergenic | 5.0% |
| TTCAGATCCGATCTGACCGA+CGG | - | chr7_3:44173100-44173119 | None:intergenic | 50.0% | |
| TCCAGAGGAGATTGCTTCCA+TGG | + | chr7_3:44173207-44173226 | Msa1105580:CDS | 50.0% | |
| ACCATGGAAGCAATCTCCTC+TGG | - | chr7_3:44173211-44173230 | None:intergenic | 50.0% | |
| !!! | TTGACGGTGCCGTTTTTCCA+TGG | - | chr7_3:44174192-44174211 | None:intergenic | 50.0% |
| CACATGTCTTGGCGGAGATT+TGG | + | chr7_3:44174818-44174837 | Msa1105580:intron | 50.0% | |
| CTGTCCTACATCACCCAACA+AGG | + | chr7_3:44175404-44175423 | Msa1105580:intron | 50.0% | |
| TCCTACATCACCCAACAAGG+TGG | + | chr7_3:44175407-44175426 | Msa1105580:intron | 50.0% | |
| CCTACATCACCCAACAAGGT+GGG | + | chr7_3:44175408-44175427 | Msa1105580:intron | 50.0% | |
| CTACATCACCCAACAAGGTG+GGG | + | chr7_3:44175409-44175428 | Msa1105580:intron | 50.0% | |
| !!! | ATCTAGTTTTGGGGTGTCGG+TGG | - | chr7_3:44175640-44175659 | None:intergenic | 50.0% |
| TGTTGAGGGATGAGACTGGT+GGG | - | chr7_3:44175788-44175807 | None:intergenic | 50.0% | |
| ATGTTGAGGGATGAGACTGG+TGG | - | chr7_3:44175789-44175808 | None:intergenic | 50.0% | |
| TACGCAATCACACGGAGAGA+AGG | + | chr7_3:44176053-44176072 | Msa1105580:CDS | 50.0% | |
| AATCAGCCAACCGCTTTCTG+CGG | - | chr7_3:44176153-44176172 | None:intergenic | 50.0% | |
| TTTGGTCGCAATGCTATCGG+TGG | + | chr7_3:44176184-44176203 | Msa1105580:CDS | 50.0% | |
| CAACGTAGTACCTTCCGTCA+CGG | - | chr7_3:44176210-44176229 | None:intergenic | 50.0% | |
| GTCACGCCGTCATTCAAGAT+AGG | + | chr7_3:44176281-44176300 | Msa1105580:CDS | 50.0% | |
| ATTGGCACCACGACCATCTA+TGG | - | chr7_3:44176380-44176399 | None:intergenic | 50.0% | |
| ! | TCCCAGTCGGCTTACAATCA+TGG | - | chr7_3:44176474-44176493 | None:intergenic | 50.0% |
| TAAGCCGACTGGGAATGCTA+TGG | + | chr7_3:44176480-44176499 | Msa1105580:CDS | 50.0% | |
| CGAACCATAGCATTCCCAGT+CGG | - | chr7_3:44176487-44176506 | None:intergenic | 50.0% | |
| CCTCCATCCAAAATGGGAAG+GGG | - | chr7_3:44176515-44176534 | None:intergenic | 50.0% | |
| GTCCTCCATCCAAAATGGGA+AGG | - | chr7_3:44176517-44176536 | None:intergenic | 50.0% | |
| ! | AGGACAATGGCTGATGGTGA+TGG | + | chr7_3:44176532-44176551 | Msa1105580:CDS | 50.0% |
| ! | ATTGGAAACGGTAATGGCGG+TGG | - | chr7_3:44176647-44176666 | None:intergenic | 50.0% |
| GGATAAGACCCTCCCCAAAA+TGG | - | chr7_3:44176923-44176942 | None:intergenic | 50.0% | |
| ! | TTGGGGAGGGTCTTATCCAA+AGG | + | chr7_3:44176925-44176944 | Msa1105580:CDS | 50.0% |
| !! | CCTCTGAGACACTAGGAAGT+TGG | - | chr7_3:44177133-44177152 | None:intergenic | 50.0% |
| CCAACTTCCTAGTGTCTCAG+AGG | + | chr7_3:44177130-44177149 | Msa1105580:intron | 50.0% | |
| TAGACACGGGTATTTCCACG+TGG | + | chr7_3:44177252-44177271 | Msa1105580:CDS | 50.0% | |
| GATGTGGACAGGTGACAAAG+AGG | + | chr7_3:44177477-44177496 | Msa1105580:intron | 50.0% | |
| GTGACAAAGAGGGTGGATAC+AGG | + | chr7_3:44177488-44177507 | Msa1105580:CDS | 50.0% | |
| GGAACTTTAACTGCAGGTGC+TGG | + | chr7_3:44177653-44177672 | Msa1105580:CDS | 50.0% | |
| GTTATTAAATGTCGCCGGGG+TGG | + | chr7_3:44177677-44177696 | Msa1105580:CDS | 50.0% | |
| ! | GAGGGGTACACTATTCCACA+GGG | - | chr7_3:44178165-44178184 | None:intergenic | 50.0% |
| ! | AGAGGGGTACACTATTCCAC+AGG | - | chr7_3:44178166-44178185 | None:intergenic | 50.0% |
| GGAGCGTACACGTGGCATAA+AGG | + | chr7_3:44172986-44173005 | Msa1105580:intron | 55.0% | |
| TCAGCACAGTCTGACCCACT+TGG | + | chr7_3:44173613-44173632 | Msa1105580:intron | 55.0% | |
| CCCACCTTGTTGGGTGATGT+AGG | - | chr7_3:44175411-44175430 | None:intergenic | 55.0% | |
| GTGGCTTACCCCACCTTGTT+GGG | - | chr7_3:44175420-44175439 | None:intergenic | 55.0% | |
| TGTGGCTTACCCCACCTTGT+TGG | - | chr7_3:44175421-44175440 | None:intergenic | 55.0% | |
| TTTGGTACCGCCGCAGAAAG+CGG | + | chr7_3:44176140-44176159 | Msa1105580:CDS | 55.0% | |
| ! | CGGTTGGCTGATTGTGCCAT+TGG | + | chr7_3:44176160-44176179 | Msa1105580:CDS | 55.0% |
| AATGCTATCGGTGGCCGTGA+CGG | + | chr7_3:44176193-44176212 | Msa1105580:CDS | 55.0% | |
| AGTGCCAGGTCTTGGGTTCA+CGG | - | chr7_3:44176257-44176276 | None:intergenic | 55.0% | |
| ! | CGTAGCTCCCCTTCCCATTT+TGG | + | chr7_3:44176505-44176524 | Msa1105580:CDS | 55.0% |
| ! | GCTCCCCTTCCCATTTTGGA+TGG | + | chr7_3:44176509-44176528 | Msa1105580:CDS | 55.0% |
| ! | CCCCTTCCCATTTTGGATGG+AGG | + | chr7_3:44176512-44176531 | Msa1105580:CDS | 55.0% |
| GGATGGAGGACAATGGCTGA+TGG | + | chr7_3:44176526-44176545 | Msa1105580:CDS | 55.0% | |
| CTACTTCACCCACCACAACG+AGG | + | chr7_3:44176669-44176688 | Msa1105580:CDS | 55.0% | |
| !! | AGAGGTCCCTCTGAGACACT+AGG | - | chr7_3:44177140-44177159 | None:intergenic | 55.0% |
| ! | GGGCAAGGTATCTGTTGCCT+TGG | - | chr7_3:44177345-44177364 | None:intergenic | 55.0% |
| !! | CAAAAGGGTTCTGAGGGGCA+AGG | - | chr7_3:44177360-44177379 | None:intergenic | 55.0% |
| TGGACAGGTGACAAAGAGGG+TGG | + | chr7_3:44177481-44177500 | Msa1105580:intron | 55.0% | |
| GGTTGGAATTGGAGGTCCGA+GGG | + | chr7_3:44177527-44177546 | Msa1105580:CDS | 55.0% | |
| ! | GACTGGTGGGTCGGTCATGT+GGG | - | chr7_3:44175775-44175794 | None:intergenic | 60.0% |
| ! | AGACTGGTGGGTCGGTCATG+TGG | - | chr7_3:44175776-44175795 | None:intergenic | 60.0% |
| ! | GAGGGATGAGACTGGTGGGT+CGG | - | chr7_3:44175784-44175803 | None:intergenic | 60.0% |
| CAGCGCCAGCAGTCATCCAT+TGG | - | chr7_3:44176112-44176131 | None:intergenic | 60.0% | |
| GCTGGCGCTGTGACAAGCTT+TGG | + | chr7_3:44176122-44176141 | Msa1105580:CDS | 60.0% | |
| TCACGGGGTCGTCGTCTCTT+GGG | - | chr7_3:44176240-44176259 | None:intergenic | 60.0% | |
| TTCACGGGGTCGTCGTCTCT+TGG | - | chr7_3:44176241-44176260 | None:intergenic | 60.0% | |
| TGCCAGGTCTTGGGTTCACG+GGG | - | chr7_3:44176255-44176274 | None:intergenic | 60.0% | |
| GTGCCAGGTCTTGGGTTCAC+GGG | - | chr7_3:44176256-44176275 | None:intergenic | 60.0% | |
| !! | GACGGAGAGTGCCAGGTCTT+GGG | - | chr7_3:44176264-44176283 | None:intergenic | 60.0% |
| !! | TGACGGAGAGTGCCAGGTCT+TGG | - | chr7_3:44176265-44176284 | None:intergenic | 60.0% |
| GGGTTGGAATTGGAGGTCCG+AGG | + | chr7_3:44177526-44177545 | Msa1105580:CDS | 60.0% | |
| GCTGCAGCTCCTCTTCCTGA+TGG | - | chr7_3:44177584-44177603 | None:intergenic | 60.0% | |
| GTACCGCCGCAGAAAGCGGT+TGG | + | chr7_3:44176144-44176163 | Msa1105580:CDS | 65.0% | |
| CAGCCAACCGCTTTCTGCGG+CGG | - | chr7_3:44176150-44176169 | None:intergenic | 65.0% | |
| ! | CTATCGGTGGCCGTGACGGA+AGG | + | chr7_3:44176197-44176216 | Msa1105580:CDS | 65.0% |
| GACCCCGTGAACCCAAGACC+TGG | + | chr7_3:44176250-44176269 | Msa1105580:CDS | 65.0% | |
| !! | ACGGCGTGACGGAGAGTGCC+AGG | - | chr7_3:44176271-44176290 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 44172516 | 44178292 | 44172516 | ID=Msa1105580;Name=Msa1105580 |
| chr7_3 | mRNA | 44172516 | 44178292 | 44172516 | ID=Msa1105580-mRNA-1;Parent=Msa1105580;Name=Msa1105580-mRNA-1;_AED=0.08;_eAED=0.08;_QI=79|1|1|1|0.85|0.75|8|563|444 |
| chr7_3 | exon | 44172516 | 44172689 | 44172516 | ID=Msa1105580-mRNA-1:exon:9097;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44172840 | 44172902 | 44172840 | ID=Msa1105580-mRNA-1:exon:9098;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44173168 | 44173236 | 44173168 | ID=Msa1105580-mRNA-1:exon:9099;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44176048 | 44176690 | 44176048 | ID=Msa1105580-mRNA-1:exon:9100;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44176852 | 44176955 | 44176852 | ID=Msa1105580-mRNA-1:exon:9101;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44177249 | 44177387 | 44177249 | ID=Msa1105580-mRNA-1:exon:9102;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44177488 | 44178147 | 44177488 | ID=Msa1105580-mRNA-1:exon:9103;Parent=Msa1105580-mRNA-1 |
| chr7_3 | exon | 44178168 | 44178292 | 44178168 | ID=Msa1105580-mRNA-1:exon:9104;Parent=Msa1105580-mRNA-1 |
| chr7_3 | five_prime_UTR | 44172516 | 44172594 | 44172516 | ID=Msa1105580-mRNA-1:five_prime_utr;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44172595 | 44172689 | 44172595 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44172840 | 44172902 | 44172840 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44173168 | 44173236 | 44173168 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44176048 | 44176690 | 44176048 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44176852 | 44176955 | 44176852 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44177249 | 44177387 | 44177249 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | CDS | 44177488 | 44177709 | 44177488 | ID=Msa1105580-mRNA-1:cds;Parent=Msa1105580-mRNA-1 |
| chr7_3 | three_prime_UTR | 44177710 | 44178147 | 44177710 | ID=Msa1105580-mRNA-1:three_prime_utr;Parent=Msa1105580-mRNA-1 |
| chr7_3 | three_prime_UTR | 44178168 | 44178292 | 44178168 | ID=Msa1105580-mRNA-1:three_prime_utr;Parent=Msa1105580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
