AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370860 MtrunA17_Chr3g0116741 54.721 519 221 6 6 522 11 517 0.0 612
Msa0370860 MtrunA17_Chr4g0058261 58.557 485 186 7 44 523 61 535 0.0 584
Msa0370860 MtrunA17_Chr4g0058281 54.043 507 218 7 17 518 15 511 0.0 566
Msa0370860 MtrunA17_Chr4g0058191 47.667 493 245 6 22 514 2 481 3.01e-162 470
Msa0370860 MtrunA17_Chr4g0047661 44.747 514 266 7 8 514 8 510 5.00e-161 468
Msa0370860 MtrunA17_Chr4g0058201 48.195 471 233 4 44 514 27 486 1.62e-160 466
Msa0370860 MtrunA17_Chr4g0058231 47.336 488 229 6 44 520 27 497 1.94e-159 463
Msa0370860 MtrunA17_Chr3g0101731 45.098 510 256 8 21 521 7 501 1.80e-157 458
Msa0370860 MtrunA17_Chr4g0047691 46.105 475 239 5 42 514 49 508 5.19e-156 455
Msa0370860 MtrunA17_Chr4g0047631 43.436 518 273 6 2 514 3 505 1.75e-155 454
Msa0370860 MtrunA17_Chr4g0047641 43.810 525 256 11 8 514 6 509 2.85e-154 451
Msa0370860 MtrunA17_Chr3g0116681 43.640 511 264 8 7 511 1 493 3.24e-154 450
Msa0370860 MtrunA17_Chr3g0101691 44.595 518 254 10 22 521 3 505 2.44e-152 445
Msa0370860 MtrunA17_Chr3g0101711 44.204 509 258 8 22 519 9 502 3.56e-151 442
Msa0370860 MtrunA17_Chr5g0445441 44.466 506 256 8 22 519 51 539 2.16e-150 441
Msa0370860 MtrunA17_Chr5g0403331 45.567 485 241 7 45 521 35 504 5.67e-149 437
Msa0370860 MtrunA17_Chr3g0101661 43.107 515 266 8 17 519 3 502 8.21e-149 437
Msa0370860 MtrunA17_Chr6g0472311 43.254 504 267 6 22 514 15 510 2.09e-148 436
Msa0370860 MtrunA17_Chr3g0101721 43.393 507 261 7 26 521 12 503 4.04e-148 434
Msa0370860 MtrunA17_Chr3g0101811 41.978 536 267 9 21 532 7 522 2.42e-147 433
Msa0370860 MtrunA17_Chr3g0101701 44.628 484 247 7 44 521 37 505 3.56e-145 427
Msa0370860 MtrunA17_Chr3g0101651 44.008 484 250 7 44 521 37 505 6.54e-145 426
Msa0370860 MtrunA17_Chr3g0101571 43.841 479 252 6 45 521 36 499 1.38e-144 425
Msa0370860 MtrunA17_Chr5g0445381 43.774 514 256 9 22 523 41 533 4.15e-144 425
Msa0370860 MtrunA17_Chr3g0101821 45.010 511 257 7 21 522 7 502 1.42e-143 423
Msa0370860 MtrunA17_Chr1g0162811 42.857 525 253 11 22 530 9 502 2.56e-143 422
Msa0370860 MtrunA17_Chr3g0101831 44.814 511 257 7 21 521 7 502 3.07e-143 422
Msa0370860 MtrunA17_Chr5g0445451 43.110 508 262 9 21 518 7 497 6.09e-143 421
Msa0370860 MtrunA17_Chr3g0101581 42.430 502 268 7 31 524 18 506 1.29e-142 420
Msa0370860 MtrunA17_Chr5g0403321 43.149 489 252 8 45 522 34 507 3.06e-142 419
Msa0370860 MtrunA17_Chr3g0101631 42.996 514 254 10 25 521 5 496 1.27e-141 417
Msa0370860 MtrunA17_Chr5g0445531 44.561 478 246 6 43 518 36 496 3.59e-141 416
Msa0370860 MtrunA17_Chr3g0101611 44.124 485 244 7 45 521 38 503 1.05e-140 416
Msa0370860 MtrunA17_Chr3g0101801 43.954 521 263 8 21 532 14 514 1.19e-140 416
Msa0370860 MtrunA17_Chr4g0076161 42.495 513 269 9 17 521 9 503 2.39e-140 414
Msa0370860 MtrunA17_Chr3g0101761 44.752 505 255 7 21 516 7 496 2.97e-140 414
Msa0370860 MtrunA17_Chr5g0445461 43.307 508 261 9 21 518 7 497 3.69e-140 414
Msa0370860 MtrunA17_Chr5g0446161 43.816 477 245 9 45 518 41 497 6.42e-140 413
Msa0370860 MtrunA17_Chr4g0020041 41.847 509 268 9 21 518 8 499 1.24e-139 413
Msa0370860 MtrunA17_Chr5g0431641 41.865 504 268 8 23 518 11 497 1.51e-139 412
Msa0370860 MtrunA17_Chr5g0403351 41.188 505 268 8 31 521 14 503 1.54e-138 410
Msa0370860 MtrunA17_Chr3g0101751 43.137 510 266 7 21 521 14 508 4.59e-137 406
Msa0370860 MtrunA17_Chr4g0024771 41.165 515 273 9 22 528 10 502 6.60e-137 405
Msa0370860 MtrunA17_Chr3g0101601 41.779 517 268 9 17 521 3 498 8.57e-137 405
Msa0370860 MtrunA17_Chr5g0445421 42.226 521 253 9 8 518 68 550 8.71e-137 407
Msa0370860 MtrunA17_Chr5g0446151 42.797 479 250 9 44 518 40 498 1.29e-136 405
Msa0370860 MtrunA17_Chr3g0101621 42.209 507 267 8 17 518 3 488 1.92e-136 404
Msa0370860 MtrunA17_Chr6g0463801 41.837 490 263 8 33 518 23 494 3.33e-135 401
Msa0370860 MtrunA17_Chr8g0357421 43.470 513 260 8 21 521 7 501 4.12e-135 401
Msa0370860 MtrunA17_Chr8g0361471 40.351 513 280 9 17 518 1 498 4.55e-135 401
Msa0370860 MtrunA17_Chr5g0431671 41.494 482 261 7 41 518 34 498 1.49e-133 397
Msa0370860 MtrunA17_Chr3g0101671 40.117 511 279 9 22 520 9 504 4.14e-133 396
Msa0370860 MtrunA17_Chr1g0167321 44.939 494 243 9 44 531 33 503 1.48e-132 394
Msa0370860 MtrunA17_Chr8g0357431 42.466 511 269 7 21 521 7 502 2.79e-132 394
Msa0370860 MtrunA17_Chr6g0463791 42.300 513 267 8 18 519 3 497 5.31e-132 393
Msa0370860 MtrunA17_Chr6g0466331 39.571 513 284 9 17 518 1 498 1.23e-130 390
Msa0370860 MtrunA17_Chr1g0162801 43.443 488 252 9 39 519 31 501 1.87e-130 389
Msa0370860 MtrunA17_Chr6g0465511 39.376 513 285 9 17 518 1 498 1.96e-129 387
Msa0370860 MtrunA17_Chr1g0156101 42.213 488 256 7 46 518 33 509 2.15e-129 387
Msa0370860 MtrunA17_Chr4g0011901 43.750 480 257 6 39 516 23 491 1.55e-128 384
Msa0370860 MtrunA17_Chr3g0101741 43.567 443 229 5 80 521 1 423 3.52e-128 380
Msa0370860 MtrunA17_Chr4g0011921 43.056 504 264 10 22 516 2 491 1.05e-127 382
Msa0370860 MtrunA17_Chr7g0218601 42.171 479 262 7 45 521 34 499 6.03e-126 377
Msa0370860 MtrunA17_Chr2g0310391 38.900 491 286 7 22 510 4 482 6.13e-126 377
Msa0370860 MtrunA17_Chr2g0280261 42.828 495 257 10 34 522 21 495 1.42e-125 377
Msa0370860 MtrunA17_Chr8g0390881 39.341 516 281 12 25 524 8 507 4.44e-125 375
Msa0370860 MtrunA17_Chr5g0430031 39.768 518 286 10 17 524 6 507 5.87e-125 375
Msa0370860 MtrunA17_Chr8g0382901 41.420 507 276 8 22 524 468 957 8.91e-125 388
Msa0370860 MtrunA17_Chr8g0382901 42.094 468 238 8 45 510 28 464 4.30e-119 373
Msa0370860 MtrunA17_Chr5g0419691 43.038 474 255 7 46 516 30 491 8.92e-125 374
Msa0370860 MtrunA17_Chr3g0116721 92.893 197 6 3 151 346 1 190 2.06e-124 362
Msa0370860 MtrunA17_Chr7g0218611 41.975 486 269 6 38 521 26 500 2.92e-124 373
Msa0370860 MtrunA17_Chr6g0484841 42.062 485 250 11 46 519 38 502 3.07e-123 371
Msa0370860 MtrunA17_Chr8g0344151 38.659 507 291 8 21 520 12 505 5.84e-123 370
Msa0370860 MtrunA17_Chr4g0011961 40.637 502 278 8 22 516 2 490 7.66e-123 369
Msa0370860 MtrunA17_Chr4g0011871 42.316 475 258 7 46 516 30 492 5.12e-122 367
Msa0370860 MtrunA17_Chr2g0310381 39.186 467 271 6 45 510 28 482 2.33e-121 365
Msa0370860 MtrunA17_Chr8g0344181 39.918 486 272 8 42 520 35 507 5.25e-121 365
Msa0370860 MtrunA17_Chr5g0430131 39.453 512 278 11 23 519 7 501 9.36e-121 364
Msa0370860 MtrunA17_Chr5g0430101 39.181 513 282 12 18 519 6 499 1.85e-120 363
Msa0370860 MtrunA17_Chr4g0035921 38.359 524 286 10 14 519 7 511 1.92e-120 364
Msa0370860 MtrunA17_Chr6g0484811 38.462 507 288 9 21 519 13 503 1.40e-118 359
Msa0370860 MtrunA17_Chr5g0430081 38.943 511 276 12 24 519 11 500 1.93e-118 358
Msa0370860 MtrunA17_Chr1g0156081 42.020 495 259 8 40 518 51 533 1.49e-117 357
Msa0370860 MtrunA17_Chr5g0431501 38.947 475 277 7 45 516 33 497 5.51e-117 355
Msa0370860 MtrunA17_Chr5g0431461 38.947 475 277 7 45 516 33 497 5.51e-117 355
Msa0370860 MtrunA17_Chr5g0431511 38.316 475 280 6 45 516 33 497 1.28e-116 353
Msa0370860 MtrunA17_Chr4g0011881 43.030 495 262 9 27 516 12 491 5.02e-115 349
Msa0370860 MtrunA17_Chr4g0011981 42.204 481 263 8 39 516 23 491 3.14e-114 347
Msa0370860 MtrunA17_Chr8g0344191 37.402 508 295 7 24 520 44 539 5.43e-114 348
Msa0370860 MtrunA17_Chr5g0406651 42.394 493 267 8 28 516 13 492 1.09e-113 346
Msa0370860 MtrunA17_Chr3g0086691 39.496 476 264 9 54 518 41 503 1.82e-113 346
Msa0370860 MtrunA17_Chr7g0254641 39.344 488 267 11 42 514 34 507 1.84e-113 346
Msa0370860 MtrunA17_Chr5g0430091 37.838 518 296 12 12 519 1 502 7.39e-113 344
Msa0370860 MtrunA17_Chr3g0086661 40.966 476 257 8 54 518 41 503 8.13e-112 342
Msa0370860 MtrunA17_Chr3g0086651 39.376 513 283 9 21 518 4 503 9.46e-111 339
Msa0370860 MtrunA17_Chr5g0405001 36.138 523 306 9 9 519 5 511 6.03e-110 337
Msa0370860 MtrunA17_Chr3g0084921 36.015 522 305 10 19 523 5 514 7.74e-110 337
Msa0370860 MtrunA17_Chr8g0372251 38.254 481 271 9 40 510 30 494 1.56e-108 333
Msa0370860 MtrunA17_Chr3g0094171 36.062 513 301 10 10 514 7 500 1.75e-108 333
Msa0370860 MtrunA17_Chr1g0174481 36.739 509 295 9 20 518 5 496 5.72e-108 332
Msa0370860 MtrunA17_Chr7g0235551 36.802 519 301 11 16 521 3 507 2.41e-107 330
Msa0370860 MtrunA17_Chr4g0061381 36.688 477 274 8 54 518 40 500 6.46e-106 326
Msa0370860 MtrunA17_Chr7g0258221 36.719 512 292 12 22 519 9 502 2.66e-105 325
Msa0370860 MtrunA17_Chr5g0430111 40.000 440 240 8 12 441 1 426 1.06e-104 320
Msa0370860 MtrunA17_Chr4g0057001 36.250 480 285 9 44 519 49 511 1.18e-104 323
Msa0370860 MtrunA17_Chr1g0174461 36.523 512 294 12 21 518 7 501 8.32e-104 321
Msa0370860 MtrunA17_Chr3g0094231 36.100 482 287 8 37 514 28 492 1.86e-103 320
Msa0370860 MtrunA17_Chr8g0356001 33.852 514 319 9 13 518 3 503 3.50e-103 319
Msa0370860 MtrunA17_Chr1g0174441 35.229 545 310 16 4 523 4 530 1.18e-101 316
Msa0370860 MtrunA17_Chr1g0174451 33.723 513 308 12 21 518 7 502 7.30e-99 308
Msa0370860 MtrunA17_Chr5g0401681 36.346 509 289 11 17 515 1 484 9.41e-99 307
Msa0370860 MtrunA17_Chr4g0039901 34.156 486 298 8 36 516 26 494 6.57e-98 305
Msa0370860 MtrunA17_Chr1g0200961 36.292 507 297 12 21 518 5 494 7.05e-98 305
Msa0370860 MtrunA17_Chr4g0030701 36.145 498 288 9 40 519 30 515 1.78e-97 305
Msa0370860 MtrunA17_Chr4g0056951 34.755 469 282 7 57 519 56 506 5.10e-96 301
Msa0370860 MtrunA17_Chr2g0304871 35.391 486 296 8 40 516 32 508 7.17e-96 301
Msa0370860 MtrunA17_Chr1g0174471 33.932 501 304 10 29 518 33 517 4.89e-95 299
Msa0370860 MtrunA17_Chr7g0255531 31.537 501 325 8 21 516 4 491 5.28e-95 298
Msa0370860 MtrunA17_Chr5g0395321 33.996 503 301 12 24 519 18 496 5.73e-95 299
Msa0370860 MtrunA17_Chr5g0395331 34.702 487 298 9 40 519 30 503 1.21e-94 297
Msa0370860 MtrunA17_Chr8g0355961 34.047 514 318 8 13 518 3 503 2.60e-94 296
Msa0370860 MtrunA17_Chr1g0156061 37.500 480 235 7 40 518 50 465 6.28e-94 294
Msa0370860 MtrunA17_Chr7g0265611 34.122 507 298 11 32 520 28 516 6.00e-93 293
Msa0370860 MtrunA17_Chr6g0451741 36.364 506 298 11 24 516 45 539 4.91e-92 291
Msa0370860 MtrunA17_Chr7g0246221 32.108 517 321 12 17 519 1 501 5.26e-92 290
Msa0370860 MtrunA17_Chr8g0362701 33.053 475 295 8 52 518 42 501 5.83e-92 290
Msa0370860 MtrunA17_Chr1g0164211 32.917 480 307 6 40 518 26 491 6.31e-92 290
Msa0370860 MtrunA17_Chr4g0053621 35.529 501 293 11 22 514 9 487 2.00e-91 289
Msa0370860 MtrunA17_Chr1g0160851 31.423 506 326 8 18 518 5 494 3.48e-91 288
Msa0370860 MtrunA17_Chr6g0451781 35.818 483 291 8 53 522 82 558 1.03e-90 288
Msa0370860 MtrunA17_Chr7g0224551 32.422 512 303 12 19 510 9 497 1.74e-90 286
Msa0370860 MtrunA17_Chr6g0451691 33.658 514 321 9 17 516 14 521 1.88e-90 287
Msa0370860 MtrunA17_Chr1g0205361 31.548 504 321 8 23 518 7 494 3.01e-90 285
Msa0370860 MtrunA17_Chr7g0224561 32.617 512 302 13 19 510 9 497 4.05e-90 286
Msa0370860 MtrunA17_Chr2g0314731 32.851 484 298 9 13 488 1 465 4.28e-90 285
Msa0370860 MtrunA17_Chr5g0395381 33.996 503 276 12 24 519 18 471 4.87e-90 284
Msa0370860 MtrunA17_Chr5g0401691 32.460 496 310 10 22 514 27 500 7.94e-90 285
Msa0370860 MtrunA17_Chr2g0296651 34.387 506 290 12 25 514 4 483 1.63e-89 283
Msa0370860 MtrunA17_Chr7g0258211 35.534 515 291 12 25 518 12 506 1.71e-89 284
Msa0370860 MtrunA17_Chr6g0451751 32.988 482 306 8 46 516 42 517 1.37e-88 282
Msa0370860 MtrunA17_Chr8g0339331 33.333 486 293 10 46 516 39 508 2.12e-88 281
Msa0370860 MtrunA17_Chr8g0351801 34.836 488 284 9 55 521 44 518 5.10e-88 280
Msa0370860 MtrunA17_Chr4g0052851 34.016 488 289 12 31 514 17 475 1.66e-87 278
Msa0370860 MtrunA17_Chr3g0116731 85.621 153 5 2 371 523 1 136 1.90e-87 265
Msa0370860 MtrunA17_Chr4g0046631 33.855 511 315 10 17 516 14 512 3.87e-86 275
Msa0370860 MtrunA17_Chr1g0207841 34.526 475 284 7 52 510 45 508 8.13e-86 275
Msa0370860 MtrunA17_Chr1g0213671 33.200 500 310 10 31 519 19 505 1.34e-85 274
Msa0370860 MtrunA17_Chr2g0314721 31.590 478 304 9 18 488 15 476 1.93e-85 273
Msa0370860 MtrunA17_Chr4g0052861 32.008 503 308 8 21 514 6 483 2.51e-85 273
Msa0370860 MtrunA17_Chr7g0246121 33.661 508 316 9 20 519 4 498 6.87e-85 271
Msa0370860 MtrunA17_Chr6g0458561 32.640 481 300 9 46 516 55 521 6.90e-85 273
Msa0370860 MtrunA17_Chr1g0176831 31.106 479 313 7 13 488 31 495 1.96e-84 271
Msa0370860 MtrunA17_Chr4g0030711 33.824 476 288 8 52 510 44 509 2.67e-84 271
Msa0370860 MtrunA17_Chr6g0451641 33.012 518 296 14 28 516 15 510 3.46e-84 270
Msa0370860 MtrunA17_Chr5g0431591 43.403 288 157 4 233 518 32 315 3.85e-83 261
Msa0370860 MtrunA17_Chr4g0008101 33.464 511 311 11 28 516 14 517 4.35e-83 268
Msa0370860 MtrunA17_Chr8g0362481 31.991 447 281 8 80 518 1 432 7.79e-83 264
Msa0370860 MtrunA17_Chr4g0052881 32.669 502 305 9 22 514 7 484 1.69e-81 263
Msa0370860 MtrunA17_Chr4g0017411 32.720 489 294 11 31 514 14 472 4.35e-81 261
Msa0370860 MtrunA17_Chr3g0082701 31.783 516 328 8 19 516 9 518 9.25e-81 261
Msa0370860 MtrunA17_Chr1g0205371 30.693 505 332 7 18 518 5 495 9.38e-81 261
Msa0370860 MtrunA17_Chr8g0339311 32.329 498 312 13 37 520 36 522 6.36e-80 259
Msa0370860 MtrunA17_Chr5g0419451 34.958 472 280 11 47 514 62 510 9.13e-80 259
Msa0370860 MtrunA17_Chr4g0039391 32.473 465 292 9 55 514 45 492 1.49e-79 258
Msa0370860 MtrunA17_Chr7g0246151 31.275 502 319 11 26 517 13 498 5.78e-78 253
Msa0370860 MtrunA17_Chr6g0466941 31.845 515 321 13 17 514 8 509 8.33e-77 251
Msa0370860 MtrunA17_Chr4g0046321 29.752 484 304 10 46 510 35 501 6.23e-75 246
Msa0370860 MtrunA17_Chr4g0046331 30.426 493 291 12 46 510 35 503 6.73e-75 246
Msa0370860 MtrunA17_Chr6g0466901 31.783 516 323 14 17 516 8 510 2.27e-74 244
Msa0370860 MtrunA17_Chr7g0246131 33.129 489 311 10 26 508 13 491 2.76e-74 244
Msa0370860 MtrunA17_Chr1g0197871 29.792 480 307 11 18 488 5 463 3.08e-74 243
Msa0370860 MtrunA17_Chr4g0046351 29.735 491 295 12 46 510 35 501 5.58e-74 243
Msa0370860 MtrunA17_Chr4g0058211 53.431 204 91 3 311 514 10 209 1.12e-73 233
Msa0370860 MtrunA17_Chr5g0432751 30.533 488 317 9 26 505 14 487 3.52e-73 241
Msa0370860 MtrunA17_Chr7g0246181 32.079 505 326 8 20 517 4 498 3.74e-73 241
Msa0370860 MtrunA17_Chr1g0197881 29.730 481 307 12 17 488 4 462 1.23e-72 239
Msa0370860 MtrunA17_Chr1g0197891 30.417 480 304 11 18 488 5 463 1.54e-72 239
Msa0370860 MtrunA17_Chr1g0197851 29.876 482 303 11 21 488 3 463 5.00e-72 238
Msa0370860 MtrunA17_Chr1g0200951 33.605 491 289 16 39 514 53 521 4.99e-70 233
Msa0370860 MtrunA17_Chr8g0346261 32.238 487 283 18 47 517 86 541 1.91e-69 232
Msa0370860 MtrunA17_Chr2g0296661 31.760 466 289 8 57 514 44 488 4.13e-69 230
Msa0370860 MtrunA17_Chr5g0446101 36.478 318 190 7 202 518 4 310 9.32e-69 223
Msa0370860 MtrunA17_Chr5g0430071 36.486 370 212 10 157 519 2 355 1.20e-67 222
Msa0370860 MtrunA17_Chr8g0370651 29.228 544 339 13 12 523 1 530 2.53e-67 226
Msa0370860 MtrunA17_Chr8g0377341 31.078 473 294 13 49 514 71 518 2.09e-65 221
Msa0370860 MtrunA17_Chr4g0011941 49.751 201 99 2 320 520 1 199 2.36e-65 211
Msa0370860 MtrunA17_Chr8g0370641 28.571 532 344 12 12 520 1 519 1.26e-64 219
Msa0370860 MtrunA17_Chr8g0390871 46.729 214 110 4 312 524 19 229 4.94e-63 206
Msa0370860 MtrunA17_Chr4g0011851 48.293 205 104 2 312 516 8 210 5.94e-63 205
Msa0370860 MtrunA17_Chr5g0445751 37.821 312 166 7 31 332 22 315 1.54e-62 207
Msa0370860 MtrunA17_Chr1g0210091 29.654 462 299 9 54 505 74 519 2.26e-62 213
Msa0370860 MtrunA17_Chr3g0107611 28.794 514 318 15 2 489 11 502 4.77e-62 213
Msa0370860 MtrunA17_Chr6g0463621 47.291 203 102 3 320 519 1 201 5.73e-60 197
Msa0370860 MtrunA17_Chr2g0310351 47.668 193 95 3 320 510 1 189 6.04e-60 196
Msa0370860 MtrunA17_Chr3g0101591 45.320 203 109 2 319 521 38 238 6.81e-60 198
Msa0370860 MtrunA17_Chr5g0445371 42.276 246 106 6 272 516 15 225 2.67e-58 194
Msa0370860 MtrunA17_Chr5g0445351 56.098 164 70 2 348 511 52 213 9.63e-58 191
Msa0370860 MtrunA17_Chr3g0107541 28.285 449 299 8 54 489 59 497 2.61e-57 199
Msa0370860 MtrunA17_Chr1g0160861 31.627 332 216 6 190 518 12 335 1.02e-56 192
Msa0370860 MtrunA17_Chr3g0117301 61.017 118 45 1 371 488 1 117 2.37e-55 181
Msa0370860 MtrunA17_Chr2g0280071 27.639 521 347 14 13 518 30 535 3.25e-55 197
Msa0370860 MtrunA17_Chr6g0463611 36.424 302 168 5 24 317 23 308 3.42e-55 188
Msa0370860 MtrunA17_Chr1g0174431 42.718 206 109 3 320 519 1 203 1.47e-54 183
Msa0370860 MtrunA17_Chr2g0280081 28.233 464 301 12 71 520 560 1005 9.83e-54 196
Msa0370860 MtrunA17_Chr2g0280081 27.293 447 301 10 71 508 59 490 4.85e-49 182
Msa0370860 MtrunA17_Chr2g0280121 28.446 457 301 12 71 516 63 504 3.63e-53 188
Msa0370860 MtrunA17_Chr4g0011861 37.184 277 160 5 46 318 30 296 4.45e-53 182
Msa0370860 MtrunA17_Chr1g0198191 27.515 487 309 14 21 486 20 483 2.87e-51 183
Msa0370860 MtrunA17_Chr8g0364651 25.832 511 343 12 18 514 3 491 3.21e-51 182
Msa0370860 MtrunA17_Chr5g0445761 48.500 200 101 2 320 519 1 198 9.64e-51 172
Msa0370860 MtrunA17_Chr5g0409051 27.079 517 324 18 25 514 11 501 6.52e-50 179
Msa0370860 MtrunA17_Chr6g0451681 33.992 253 162 2 265 516 222 470 4.49e-48 173
Msa0370860 MtrunA17_Chr6g0451681 35.204 196 116 5 14 205 31 219 1.53e-24 106
Msa0370860 MtrunA17_Chr5g0413911 26.465 495 330 11 42 514 39 521 1.48e-47 173
Msa0370860 MtrunA17_Chr2g0280041 26.439 469 303 12 71 520 91 536 5.85e-47 171
Msa0370860 MtrunA17_Chr4g0011931 35.880 301 180 5 22 318 4 295 8.33e-47 165
Msa0370860 MtrunA17_Chr6g0451811 39.604 202 117 2 316 516 1 198 3.18e-46 160
Msa0370860 MtrunA17_Chr3g0117321 59.829 117 47 0 47 163 9 125 5.48e-46 157
Msa0370860 MtrunA17_Chr2g0314781 45.098 153 83 1 336 488 1 152 1.05e-45 158
Msa0370860 MtrunA17_Chr4g0074581 27.048 525 332 18 17 514 35 535 1.58e-45 167
Msa0370860 MtrunA17_Chr6g0451771 37.681 207 124 2 311 516 13 215 1.89e-45 159
Msa0370860 MtrunA17_Chr8g0387101 27.056 462 314 10 69 520 59 507 2.38e-45 166
Msa0370860 MtrunA17_Chr4g0046681 37.443 219 128 3 303 516 10 224 3.24e-45 159
Msa0370860 MtrunA17_Chr5g0423621 43.243 185 95 4 337 518 2 179 9.92e-44 153
Msa0370860 MtrunA17_Chr3g0101541 50.000 138 67 2 368 505 1 136 1.88e-43 150
Msa0370860 MtrunA17_Chr5g0445411 48.718 156 76 2 21 172 19 174 2.28e-43 152
Msa0370860 MtrunA17_Chr1g0174421 31.511 311 195 7 16 318 14 314 6.96e-43 155
Msa0370860 MtrunA17_Chr5g0430171 35.246 244 139 6 12 251 1 229 2.20e-42 151
Msa0370860 MtrunA17_Chr5g0445361 54.545 132 58 2 390 521 8 137 2.84e-42 147
Msa0370860 MtrunA17_Chr3g0116711 80.435 92 8 1 1 82 10 101 2.85e-41 144
Msa0370860 MtrunA17_Chr2g0280011 38.095 210 118 5 319 520 7 212 2.86e-41 147
Msa0370860 MtrunA17_Chr4g0076171 42.553 188 81 4 337 519 2 167 1.37e-40 144
Msa0370860 MtrunA17_Chr5g0430041 46.207 145 76 2 346 489 1 144 2.07e-40 144
Msa0370860 MtrunA17_Chr5g0430151 40.571 175 101 3 346 519 1 173 1.17e-39 142
Msa0370860 MtrunA17_Chr5g0402981 38.378 185 108 3 332 514 4 184 1.37e-39 142
Msa0370860 MtrunA17_Chr4g0030741 29.969 327 201 7 26 341 38 347 5.91e-39 145
Msa0370860 MtrunA17_Chr2g0280061 37.143 210 120 5 319 520 7 212 3.77e-38 139
Msa0370860 MtrunA17_Chr6g0477081 32.258 248 146 5 188 430 11 241 6.98e-38 139
Msa0370860 MtrunA17_Chr4g0046661 36.406 217 129 4 313 524 18 230 1.48e-37 138
Msa0370860 MtrunA17_Chr4g0046701 44.516 155 81 2 363 516 2 152 1.08e-36 134
Msa0370860 MtrunA17_Chr3g0086681 42.949 156 85 2 366 518 11 165 1.30e-36 134
Msa0370860 MtrunA17_Chr4g0028321 44.697 132 72 1 388 519 25 155 5.84e-35 129
Msa0370860 MtrunA17_Chr2g0334021 25.101 494 333 13 41 521 31 500 1.01e-34 137
Msa0370860 MtrunA17_Chr0c19g0493771 24.520 469 317 12 69 521 211 658 2.40e-34 137
Msa0370860 MtrunA17_Chr2g0310371 41.958 143 82 1 22 163 4 146 2.66e-34 126
Msa0370860 MtrunA17_Chr5g0431631 46.269 134 65 2 28 154 28 161 4.32e-33 124
Msa0370860 MtrunA17_Chr4g0046691 29.371 286 179 7 39 318 33 301 8.19e-33 127
Msa0370860 MtrunA17_Chr5g0402971 31.538 260 166 7 46 298 41 295 9.66e-33 127
Msa0370860 MtrunA17_Chr8g0364631 25.397 504 326 13 43 522 30 507 5.95e-32 129
Msa0370860 MtrunA17_Chr6g0451801 29.841 315 198 9 23 318 12 322 7.41e-31 122
Msa0370860 MtrunA17_Chr4g0046671 28.315 279 188 5 46 318 45 317 1.73e-30 121
Msa0370860 MtrunA17_Chr3g0105761 36.145 166 102 2 326 489 6 169 2.80e-30 117
Msa0370860 MtrunA17_Chr1g0207851 30.466 279 171 6 52 318 45 312 4.87e-30 120
Msa0370860 MtrunA17_Chr3g0107551 33.129 163 107 1 326 486 11 173 4.48e-27 108
Msa0370860 MtrunA17_Chr3g0135841 24.742 485 285 16 47 480 44 499 2.37e-26 112
Msa0370860 MtrunA17_Chr1g0179811 22.965 479 323 13 28 488 62 512 2.90e-26 112
Msa0370860 MtrunA17_Chr4g0004601 25.893 448 279 19 64 494 99 510 8.30e-26 110
Msa0370860 MtrunA17_Chr1g0203141 22.796 465 307 14 69 518 87 514 2.38e-25 109
Msa0370860 MtrunA17_Chr8g0381541 24.213 508 300 21 21 492 7 465 2.52e-25 109
Msa0370860 MtrunA17_Chr8g0381571 24.635 479 282 19 21 465 7 440 3.28e-25 108
Msa0370860 MtrunA17_Chr5g0396521 24.580 476 294 15 75 504 102 558 5.15e-25 108
Msa0370860 MtrunA17_Chr5g0444981 38.690 168 98 3 324 488 12 177 6.34e-25 102
Msa0370860 MtrunA17_Chr1g0151221 25.000 484 290 18 42 480 36 491 1.00e-24 107
Msa0370860 MtrunA17_Chr6g0472221 22.129 479 315 14 59 518 86 525 1.74e-24 107
Msa0370860 MtrunA17_Chr2g0288661 23.810 441 299 15 72 501 90 504 1.79e-24 107
Msa0370860 MtrunA17_Chr2g0293411 26.077 441 269 17 42 465 38 438 2.75e-24 106
Msa0370860 MtrunA17_Chr2g0313831 24.263 441 292 17 66 494 85 495 4.87e-24 105
Msa0370860 MtrunA17_Chr5g0445341 54.118 85 38 1 80 163 1 85 5.17e-24 95.9
Msa0370860 MtrunA17_Chr3g0105751 24.671 304 208 6 26 318 28 321 5.32e-24 103
Msa0370860 MtrunA17_Chr8g0334891 25.800 469 289 16 37 488 30 456 6.30e-24 105
Msa0370860 MtrunA17_Chr5g0430051 44.144 111 57 2 17 123 7 116 1.29e-23 95.9
Msa0370860 MtrunA17_Chr2g0313821 24.263 441 290 16 69 494 84 495 1.37e-23 104
Msa0370860 MtrunA17_Chr2g0313781 23.611 432 304 12 75 494 90 507 2.44e-23 103
Msa0370860 MtrunA17_Chr7g0248991 26.518 313 206 10 134 438 55 351 4.19e-23 101
Msa0370860 MtrunA17_Chr5g0445541 47.475 99 45 2 22 113 10 108 5.28e-23 94.7
Msa0370860 MtrunA17_Chr2g0313811 23.476 443 301 13 70 494 85 507 5.73e-23 102
Msa0370860 MtrunA17_Chr3g0128461 23.129 441 306 15 69 500 93 509 5.77e-23 102
Msa0370860 MtrunA17_Chr5g0431601 53.012 83 38 1 80 162 1 82 1.15e-22 92.0
Msa0370860 MtrunA17_Chr4g0030761 36.486 148 69 5 371 510 1 131 2.13e-22 93.6
Msa0370860 MtrunA17_Chr8g0334941 29.392 296 177 10 204 488 27 301 2.27e-22 98.2
Msa0370860 MtrunA17_Chr7g0235261 24.722 449 285 18 63 494 77 489 3.01e-22 100
Msa0370860 MtrunA17_Chr8g0364081 23.851 457 295 18 57 486 82 512 3.10e-22 100
Msa0370860 MtrunA17_Chr4g0063221 22.551 439 312 12 69 500 87 504 5.70e-22 99.4
Msa0370860 MtrunA17_Chr6g0484771 34.752 141 84 1 80 220 1 133 7.70e-22 92.0
Msa0370860 MtrunA17_Chr7g0215181 24.053 449 284 18 54 488 77 482 8.80e-22 98.6
Msa0370860 MtrunA17_Chr2g0313801 22.477 436 292 16 75 494 90 495 1.35e-21 98.2
Msa0370860 MtrunA17_Chr2g0313771 23.778 450 294 16 70 495 94 518 1.49e-21 98.2
Msa0370860 MtrunA17_Chr6g0457421 23.451 452 295 17 54 494 75 486 1.91e-21 97.8
Msa0370860 MtrunA17_Chr1g0203151 21.915 470 315 15 63 518 79 510 2.12e-21 97.4
Msa0370860 MtrunA17_Chr6g0479681 23.237 482 310 18 63 518 81 528 2.59e-21 97.4
Msa0370860 MtrunA17_Chr8g0351461 22.015 536 359 18 12 518 3 508 3.92e-21 96.7
Msa0370860 MtrunA17_Chr8g0354571 23.059 438 302 13 66 495 94 504 1.19e-20 95.1
Msa0370860 MtrunA17_Chr5g0403931 22.177 487 319 14 24 488 6 454 1.20e-20 95.1
Msa0370860 MtrunA17_Chr3g0107561 23.377 308 213 8 21 315 19 316 1.71e-20 92.8
Msa0370860 MtrunA17_Chr8g0351421 21.601 537 361 18 12 518 3 509 4.64e-20 93.6
Msa0370860 MtrunA17_Chr2g0307291 22.248 436 302 15 70 494 88 497 7.27e-20 92.8
Msa0370860 MtrunA17_Chr6g0451761 25.333 300 168 7 23 302 12 275 1.79e-19 88.6
Msa0370860 MtrunA17_Chr8g0354531 23.288 438 298 15 69 495 215 625 1.84e-19 92.0
Msa0370860 MtrunA17_Chr8g0351401 23.002 513 313 18 46 518 39 509 2.59e-19 91.3
Msa0370860 MtrunA17_Chr8g0354511 23.218 435 305 12 68 495 92 504 2.83e-19 90.9
Msa0370860 MtrunA17_Chr3g0117311 37.226 137 68 4 182 318 2 120 8.29e-19 84.0
Msa0370860 MtrunA17_Chr2g0293421 21.053 437 293 13 42 465 42 439 9.74e-19 89.4
Msa0370860 MtrunA17_Chr8g0351441 22.330 412 267 15 134 518 123 508 1.57e-18 88.6
Msa0370860 MtrunA17_Chr2g0313791 22.196 428 298 14 75 494 90 490 2.58e-18 88.2
Msa0370860 MtrunA17_Chr8g0351311 23.628 419 247 17 134 521 130 506 3.89e-18 87.4
Msa0370860 MtrunA17_Chr3g0107501 27.854 219 147 5 273 486 237 449 4.68e-18 87.0
Msa0370860 MtrunA17_Chr8g0351391 23.278 421 257 16 127 520 123 504 6.32e-18 86.7
Msa0370860 MtrunA17_Chr5g0400411 20.866 508 317 18 19 491 7 464 9.59e-18 86.3
Msa0370860 MtrunA17_Chr8g0339861 28.947 228 144 7 271 492 247 462 1.09e-17 85.9
Msa0370860 MtrunA17_Chr2g0307301 22.545 448 300 15 70 501 88 504 1.17e-17 85.9
Msa0370860 MtrunA17_Chr8g0362731 25.197 381 238 16 130 494 38 387 2.23e-17 84.3
Msa0370860 MtrunA17_Chr3g0107511 23.173 479 319 15 21 486 7 449 4.80e-17 84.0
Msa0370860 MtrunA17_Chr4g0076181 47.368 76 40 0 80 155 1 76 7.34e-17 78.2
Msa0370860 MtrunA17_Chr8g0372711 25.974 231 155 5 269 496 249 466 7.66e-17 83.2
Msa0370860 MtrunA17_Chr7g0262111 21.882 457 301 14 69 508 83 500 1.12e-16 82.8
Msa0370860 MtrunA17_Chr5g0443401 21.522 460 309 12 40 488 33 451 1.29e-16 82.4
Msa0370860 MtrunA17_Chr3g0141801 25.325 462 286 17 43 488 39 457 1.41e-16 82.4
Msa0370860 MtrunA17_Chr2g0313761 22.481 387 272 14 118 494 122 490 1.52e-16 82.4
Msa0370860 MtrunA17_Chr1g0204271 21.311 427 270 14 104 489 78 479 1.69e-16 82.4
Msa0370860 MtrunA17_Chr5g0443731 23.974 463 302 14 39 488 21 446 2.34e-16 81.6
Msa0370860 MtrunA17_Chr5g0429651 22.917 384 262 10 134 501 127 492 2.87e-16 81.6
Msa0370860 MtrunA17_Chr2g0313751 22.667 375 264 13 129 494 165 522 2.92e-16 81.6
Msa0370860 MtrunA17_Chr1g0154731 21.689 438 297 15 68 494 80 482 5.00e-16 80.9
Msa0370860 MtrunA17_Chr1g0176851 22.358 246 175 6 132 374 2 234 6.86e-16 77.4
Msa0370860 MtrunA17_Chr1g0153371 22.360 483 306 19 21 484 7 439 6.89e-16 80.5
Msa0370860 MtrunA17_Chr8g0372331 32.593 135 79 4 397 523 1 131 6.95e-16 74.3
Msa0370860 MtrunA17_Chr5g0446131 22.093 430 302 15 74 494 88 493 7.10e-16 80.5
Msa0370860 MtrunA17_Chr7g0226771 22.587 487 317 16 19 488 2 445 9.27e-16 79.7
Msa0370860 MtrunA17_Chr8g0372591 28.333 120 86 0 318 437 1 120 1.34e-15 73.9
Msa0370860 MtrunA17_Chr8g0388921 27.397 219 147 5 273 487 240 450 1.64e-15 79.0
Msa0370860 MtrunA17_Chr6g0449331 25.359 209 146 4 308 508 304 510 2.06e-15 79.0
Msa0370860 MtrunA17_Chr1g0164371 31.098 164 98 5 308 465 273 427 2.36e-15 78.6
Msa0370860 MtrunA17_Chr8g0380931 32.031 128 82 2 361 488 357 479 2.44e-15 78.6
Msa0370860 MtrunA17_Chr3g0104351 22.284 359 227 12 134 465 133 466 2.57e-15 78.6
Msa0370860 MtrunA17_Chr4g0056981 45.070 71 39 0 346 416 1 71 3.84e-15 70.5
Msa0370860 MtrunA17_Chr7g0227281 25.217 345 229 11 137 468 121 449 8.57e-15 77.0
Msa0370860 MtrunA17_Chr3g0119681 23.983 467 308 14 48 485 39 487 8.71e-15 77.0
Msa0370860 MtrunA17_Chr4g0014051 21.615 421 293 16 75 484 103 497 9.17e-15 77.0
Msa0370860 MtrunA17_Chr4g0004481 26.147 218 152 4 270 481 244 458 9.90e-15 76.6
Msa0370860 MtrunA17_Chr4g0038271 22.243 526 347 20 20 509 57 556 1.34e-14 76.6
Msa0370860 MtrunA17_Chr5g0400421 21.839 435 290 13 44 465 44 441 1.53e-14 76.3
Msa0370860 MtrunA17_Chr1g0164321 21.705 387 265 10 127 488 147 520 4.65e-14 74.7
Msa0370860 MtrunA17_Chr2g0286091 28.804 184 120 6 309 487 294 471 4.74e-14 74.7
Msa0370860 MtrunA17_Chr2g0308651 23.760 383 252 13 127 488 25 388 6.78e-14 73.9
Msa0370860 MtrunA17_Chr8g0380501 28.708 209 135 6 270 468 242 446 2.06e-13 72.8
Msa0370860 MtrunA17_Chr1g0163421 23.140 242 177 5 247 481 267 506 3.19e-13 72.0
Msa0370860 MtrunA17_Chr1g0184461 28.571 175 115 5 316 484 301 471 1.11e-12 70.5
Msa0370860 MtrunA17_Chr8g0372341 27.273 165 108 4 53 212 52 209 1.13e-12 67.4
Msa0370860 MtrunA17_Chr1g0176861 37.778 90 56 0 13 102 5 94 3.07e-12 62.8
Msa0370860 MtrunA17_Chr2g0314771 23.636 165 117 2 80 243 1 157 5.41e-12 64.3
Msa0370860 MtrunA17_Chr6g0449381 25.121 207 145 4 269 465 249 455 5.65e-12 68.2
Msa0370860 MtrunA17_Chr8g0380471 27.374 179 120 4 313 488 279 450 5.98e-12 67.8
Msa0370860 MtrunA17_Chr1g0184421 28.161 174 117 4 316 484 301 471 7.96e-12 67.8
Msa0370860 MtrunA17_Chr1g0182861 28.859 149 93 5 374 518 23 162 8.11e-12 63.5
Msa0370860 MtrunA17_Chr1g0163451 22.727 242 178 5 247 481 251 490 9.97e-12 67.4
Msa0370860 MtrunA17_Chr1g0163401 22.310 381 246 13 135 484 120 481 1.32e-11 67.0
Msa0370860 MtrunA17_Chr7g0219961 23.786 206 138 5 289 487 244 437 1.42e-11 66.6
Msa0370860 MtrunA17_Chr8g0383801 48.077 52 26 1 420 470 1 52 1.82e-11 60.8
Msa0370860 MtrunA17_Chr5g0397971 20.287 488 328 17 25 492 3 449 2.10e-11 66.2
Msa0370860 MtrunA17_Chr3g0089351 25.974 231 146 7 265 488 157 369 3.70e-11 65.1
Msa0370860 MtrunA17_Chr8g0387001 21.394 416 282 13 134 526 124 517 4.58e-11 65.1
Msa0370860 MtrunA17_Chr2g0280001 25.157 159 115 2 24 178 42 200 5.04e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370860 AT5G25140.1 42.406 507 274 7 17 520 1 492 1.63e-139 412
Msa0370860 AT5G25120.1 42.012 507 276 7 17 520 1 492 1.66e-138 410
Msa0370860 AT3G26300.1 43.539 503 265 9 22 519 7 495 6.01e-138 409
Msa0370860 AT3G48270.1 42.171 479 254 7 39 515 25 482 1.29e-137 407
Msa0370860 AT3G48310.1 42.797 479 245 10 42 515 29 483 2.30e-136 404
Msa0370860 AT3G48290.1 42.149 484 257 7 33 514 21 483 2.26e-135 402
Msa0370860 AT3G48300.1 42.650 483 246 9 41 519 25 480 3.98e-135 401
Msa0370860 AT5G57260.1 42.213 488 262 9 39 519 24 498 4.22e-135 401
Msa0370860 AT3G48300.2 42.650 483 246 9 41 519 27 482 4.24e-135 401
Msa0370860 AT3G26330.1 44.025 477 249 7 46 518 32 494 7.02e-135 400
Msa0370860 AT3G48280.1 41.141 491 265 8 28 515 13 482 1.41e-134 400
Msa0370860 AT3G26280.1 43.028 502 260 11 28 520 16 500 3.40e-134 399
Msa0370860 AT3G26280.2 43.028 502 260 11 28 520 33 517 4.80e-134 399
Msa0370860 AT1G13110.1 41.473 516 273 12 22 521 1 503 5.79e-134 399
Msa0370860 AT5G25130.1 40.594 505 286 6 17 520 1 492 6.00e-134 398
Msa0370860 AT3G26320.1 43.299 485 255 8 39 518 25 494 3.07e-133 397
Msa0370860 AT3G26170.1 41.386 505 275 9 23 519 8 499 1.02e-132 395
Msa0370860 AT3G26310.1 41.750 503 275 8 22 520 7 495 1.59e-132 395
Msa0370860 AT5G25180.1 40.524 496 277 7 28 520 12 492 1.92e-132 394
Msa0370860 AT1G13080.1 42.105 513 268 12 22 519 1 499 2.02e-132 394
Msa0370860 AT1G11610.1 43.487 476 250 7 42 514 30 489 3.00e-131 391
Msa0370860 AT3G26180.1 41.026 507 275 10 24 519 6 499 4.71e-131 391
Msa0370860 AT3G26270.1 41.700 494 264 10 36 521 23 500 5.85e-131 390
Msa0370860 AT3G26210.1 43.158 475 245 10 54 519 40 498 5.91e-131 390
Msa0370860 AT3G26230.1 41.096 511 276 11 22 521 1 497 6.39e-131 390
Msa0370860 AT1G11610.2 43.460 474 249 7 42 512 30 487 1.90e-130 389
Msa0370860 AT4G13310.1 41.068 487 274 5 34 519 21 495 3.69e-130 389
Msa0370860 AT2G30770.1 41.176 476 261 7 42 514 30 489 2.15e-129 387
Msa0370860 AT3G48290.2 40.000 510 257 8 33 514 21 509 2.44e-129 387
Msa0370860 AT2G24180.1 41.152 486 258 8 40 518 31 495 2.29e-126 379
Msa0370860 AT3G26160.1 41.750 503 272 9 25 519 10 499 6.34e-126 378
Msa0370860 AT2G30750.1 42.767 477 254 7 41 514 29 489 8.00e-126 377
Msa0370860 AT3G26150.1 40.990 505 273 10 25 519 10 499 1.04e-125 377
Msa0370860 AT3G48320.1 40.476 504 275 8 15 515 2 483 7.88e-125 375
Msa0370860 AT4G13290.1 39.630 487 273 6 34 519 22 488 1.01e-123 372
Msa0370860 AT3G44250.1 43.238 488 260 11 41 523 24 499 2.37e-123 371
Msa0370860 AT3G26190.1 41.598 488 265 9 41 521 24 498 6.48e-123 370
Msa0370860 AT5G24950.1 39.545 483 270 7 42 519 29 494 1.13e-121 367
Msa0370860 AT3G26290.1 41.300 477 262 7 47 519 33 495 1.02e-119 362
Msa0370860 AT3G26290.2 41.300 477 262 7 47 519 46 508 1.15e-119 362
Msa0370860 AT3G26200.1 41.429 490 267 9 41 523 24 500 1.49e-119 361
Msa0370860 AT4G31500.1 37.931 493 291 7 33 521 17 498 3.06e-118 358
Msa0370860 AT3G26220.1 40.472 509 281 10 21 521 6 500 5.12e-118 357
Msa0370860 AT3G53280.1 40.862 487 272 8 41 523 24 498 8.74e-118 357
Msa0370860 AT1G13090.2 39.525 463 258 7 36 490 19 467 4.90e-116 352
Msa0370860 AT2G45550.1 37.403 516 294 10 17 518 4 504 3.59e-113 345
Msa0370860 AT2G02580.1 41.980 505 272 10 21 519 6 495 9.80e-113 344
Msa0370860 AT5G07990.1 36.122 526 305 10 17 525 1 512 5.05e-112 342
Msa0370860 AT2G45560.1 37.984 516 291 11 17 518 4 504 5.76e-111 340
Msa0370860 AT3G53300.1 40.166 483 269 9 45 520 28 497 8.32e-111 339
Msa0370860 AT5G24960.1 39.918 486 264 8 42 519 30 495 1.19e-109 336
Msa0370860 AT5G42590.1 38.247 502 291 6 19 519 12 495 8.81e-109 333
Msa0370860 AT2G45570.1 37.791 516 293 10 17 518 4 505 1.14e-107 331
Msa0370860 AT3G26830.1 36.701 485 273 10 22 490 1 467 1.57e-107 330
Msa0370860 AT1G13100.1 40.541 444 242 10 55 490 38 467 2.21e-107 330
Msa0370860 AT4G36220.1 37.243 486 266 9 53 519 48 513 1.84e-106 328
Msa0370860 AT4G13770.1 36.217 497 292 10 31 518 16 496 3.12e-106 327
Msa0370860 AT5G06900.1 36.791 511 293 11 17 519 2 490 6.88e-106 327
Msa0370860 AT1G33720.1 36.791 511 296 11 17 514 4 500 4.50e-105 325
Msa0370860 AT5G35715.1 37.277 448 261 10 80 520 1 435 9.06e-102 314
Msa0370860 AT4G12320.1 35.141 498 303 9 22 514 21 503 1.22e-101 316
Msa0370860 AT1G01280.1 36.575 473 271 9 54 514 41 496 8.29e-101 313
Msa0370860 AT4G13310.2 40.789 380 215 2 34 413 21 390 7.44e-100 307
Msa0370860 AT4G12300.1 36.310 504 295 11 19 514 16 501 8.13e-100 311
Msa0370860 AT2G42250.1 36.082 485 287 7 45 521 41 510 2.47e-99 310
Msa0370860 AT4G20240.1 40.494 405 227 4 34 437 22 413 3.58e-99 307
Msa0370860 AT5G04330.1 37.449 486 276 11 46 519 33 502 8.43e-99 308
Msa0370860 AT2G40890.1 32.600 500 319 8 21 515 3 489 3.87e-97 304
Msa0370860 AT4G31940.1 35.642 491 284 10 47 516 33 512 4.56e-95 299
Msa0370860 AT3G61040.1 37.107 477 279 8 46 518 34 493 7.87e-95 298
Msa0370860 AT5G44620.1 35.456 471 287 5 54 521 55 511 1.35e-93 295
Msa0370860 AT4G22710.1 35.897 468 274 10 54 514 62 510 1.50e-93 295
Msa0370860 AT4G31970.1 35.642 491 283 12 47 516 33 511 1.81e-93 295
Msa0370860 AT4G22690.1 35.684 468 275 10 54 514 93 541 1.26e-92 294
Msa0370860 AT5G67310.1 33.794 506 302 12 15 514 14 492 3.86e-92 291
Msa0370860 AT2G45580.1 37.526 477 272 10 52 518 45 505 1.01e-91 290
Msa0370860 AT4G12310.1 34.979 466 285 7 54 514 53 505 1.88e-91 290
Msa0370860 AT4G37320.1 33.333 504 302 12 19 514 4 481 6.05e-91 287
Msa0370860 AT4G20240.2 40.365 384 212 4 34 415 22 390 4.38e-90 282
Msa0370860 AT1G74550.1 33.199 497 301 11 24 515 4 474 2.41e-88 280
Msa0370860 AT4G37330.1 34.722 504 284 15 22 514 9 478 5.91e-88 280
Msa0370860 AT4G37340.1 34.585 506 293 15 19 514 5 482 4.18e-87 278
Msa0370860 AT4G37430.1 32.816 515 316 11 22 532 7 495 3.41e-86 275
Msa0370860 AT5G10600.1 32.302 517 311 13 12 514 8 499 4.56e-86 275
Msa0370860 AT4G12330.1 33.544 474 291 8 54 521 55 510 5.46e-86 275
Msa0370860 AT4G31950.1 34.827 491 276 12 47 516 33 500 1.62e-85 274
Msa0370860 AT1G13080.2 39.529 382 207 11 148 519 14 381 2.94e-85 269
Msa0370860 AT5G06905.1 32.311 489 296 9 20 486 2 477 4.13e-85 273
Msa0370860 AT4G37410.1 34.799 523 278 19 6 514 9 482 3.32e-84 270
Msa0370860 AT5G57220.1 32.475 505 301 13 21 515 3 477 9.81e-84 268
Msa0370860 AT4G37370.1 33.333 504 299 12 19 514 5 479 2.09e-83 268
Msa0370860 AT2G25160.1 32.752 516 321 14 22 521 9 514 4.40e-83 268
Msa0370860 AT4G37400.1 33.546 471 275 11 54 514 40 482 1.29e-82 266
Msa0370860 AT5G36220.1 32.869 502 298 12 25 514 13 487 4.16e-81 262
Msa0370860 AT4G37360.1 33.135 504 300 14 22 515 6 482 1.30e-80 261
Msa0370860 AT3G32047.1 31.078 473 283 10 56 511 53 499 1.69e-80 260
Msa0370860 AT5G10610.1 32.406 503 302 13 24 514 7 483 2.13e-80 260
Msa0370860 AT3G20940.1 31.969 513 318 13 27 530 25 515 2.55e-80 261
Msa0370860 AT3G20110.1 32.239 518 318 11 24 530 13 508 3.11e-80 260
Msa0370860 AT4G15360.1 31.373 510 319 10 21 518 12 502 8.50e-80 259
Msa0370860 AT3G20090.2 33.053 475 286 11 56 519 54 507 2.23e-78 256
Msa0370860 AT2G14100.1 31.601 481 283 11 56 519 54 505 2.69e-78 255
Msa0370860 AT3G52970.1 31.774 513 320 13 24 518 10 510 6.98e-78 254
Msa0370860 AT5G24960.2 39.474 380 205 5 42 414 30 391 1.04e-77 250
Msa0370860 AT3G20950.1 30.727 550 329 17 9 531 1 525 1.30e-77 254
Msa0370860 AT1G74540.1 30.769 494 323 9 39 531 21 496 6.25e-77 251
Msa0370860 AT4G37310.1 32.087 508 310 13 24 514 4 493 8.08e-77 251
Msa0370860 AT4G15350.1 32.000 475 293 11 56 519 45 500 1.27e-76 251
Msa0370860 AT3G52970.2 31.346 520 327 13 24 518 10 524 1.68e-76 251
Msa0370860 AT3G20130.1 31.172 478 291 11 56 519 53 506 2.99e-76 249
Msa0370860 AT3G20120.4 32.885 520 312 11 17 519 5 504 3.31e-76 249
Msa0370860 AT4G15330.1 32.882 517 299 15 21 518 12 499 1.20e-75 248
Msa0370860 AT1G33720.4 36.198 384 225 8 141 518 3 372 1.49e-75 244
Msa0370860 AT1G33720.3 36.198 384 225 8 141 518 3 372 1.49e-75 244
Msa0370860 AT1G33720.5 36.198 384 225 8 141 518 3 372 1.49e-75 244
Msa0370860 AT3G20140.1 32.186 494 303 12 38 522 35 505 1.98e-74 245
Msa0370860 AT3G28740.1 33.538 489 283 14 39 515 33 491 1.04e-73 243
Msa0370860 AT1G33730.1 35.467 375 228 9 143 514 1 364 3.13e-73 237
Msa0370860 AT1G33730.2 35.467 375 228 9 143 514 1 364 3.13e-73 237
Msa0370860 AT3G20100.1 32.632 475 293 10 54 519 50 506 4.16e-73 241
Msa0370860 AT2G27000.1 32.766 470 285 11 56 514 50 499 7.29e-73 241
Msa0370860 AT1G50520.1 30.261 499 304 13 54 532 52 526 1.63e-72 240
Msa0370860 AT5G42580.1 30.369 461 290 10 65 521 60 493 6.95e-72 238
Msa0370860 AT2G23190.1 29.779 497 310 14 13 497 41 510 7.65e-72 239
Msa0370860 AT5G47990.1 30.297 472 300 9 56 518 53 504 8.74e-72 238
Msa0370860 AT3G53290.1 36.659 431 230 11 98 521 11 405 1.11e-70 232
Msa0370860 AT3G25180.1 28.893 533 335 12 13 523 4 514 2.21e-70 234
Msa0370860 AT2G23220.1 30.621 467 291 12 39 497 40 481 7.94e-70 233
Msa0370860 AT3G26180.2 43.511 262 140 5 261 519 109 365 3.65e-69 227
Msa0370860 AT3G26180.2 48.387 93 45 1 24 113 6 98 1.26e-22 100
Msa0370860 AT1G33720.2 33.741 409 226 9 141 518 3 397 3.98e-69 228
Msa0370860 AT5G09970.1 31.619 525 319 16 11 515 25 529 1.31e-68 230
Msa0370860 AT1G13710.1 31.064 470 297 13 62 524 66 515 1.96e-67 226
Msa0370860 AT2G46660.1 32.033 487 281 18 44 514 69 521 1.05e-66 225
Msa0370860 AT3G20960.2 29.825 456 291 9 72 518 69 504 1.06e-66 224
Msa0370860 AT1G66540.1 34.439 392 222 11 131 514 4 368 1.55e-66 220
Msa0370860 AT4G39950.1 28.654 520 334 13 26 520 33 540 2.92e-66 224
Msa0370860 AT3G20080.2 28.942 501 327 10 40 529 37 519 3.70e-66 223
Msa0370860 AT3G20080.1 28.942 501 327 10 40 529 37 519 3.70e-66 223
Msa0370860 AT3G61880.1 31.984 494 291 16 37 514 58 522 5.59e-66 223
Msa0370860 AT3G61880.2 31.984 494 291 16 37 514 58 522 1.16e-65 223
Msa0370860 AT2G45580.2 38.218 348 191 11 190 522 21 359 1.19e-65 217
Msa0370860 AT4G39950.2 28.654 520 334 13 26 520 73 580 1.52e-65 223
Msa0370860 AT2G22330.1 29.167 504 330 12 26 514 37 528 2.28e-65 222
Msa0370860 AT2G22330.2 29.167 504 330 12 26 514 60 551 3.19e-65 222
Msa0370860 AT2G30490.1 30.815 503 303 13 22 505 10 486 3.02e-64 218
Msa0370860 AT1G74110.1 31.417 487 293 13 47 514 65 529 4.10e-64 218
Msa0370860 AT1G50560.1 28.361 476 309 10 56 519 54 509 1.41e-62 214
Msa0370860 AT1G28430.1 30.894 492 304 14 22 497 15 486 1.83e-62 213
Msa0370860 AT5G05260.2 30.059 509 325 13 18 502 4 505 2.68e-62 213
Msa0370860 AT3G61040.2 34.574 376 227 6 46 417 34 394 5.75e-62 209
Msa0370860 AT1G01190.1 29.470 509 300 17 26 514 55 524 4.47e-61 210
Msa0370860 AT1G01190.2 29.470 509 300 17 26 514 60 529 5.56e-61 210
Msa0370860 AT1G79370.1 27.273 506 336 10 9 489 5 503 6.42e-61 210
Msa0370860 AT2G05180.1 31.122 392 251 6 56 442 52 429 9.72e-61 207
Msa0370860 AT4G15330.2 30.368 517 284 16 21 518 12 471 1.77e-60 207
Msa0370860 AT3G20130.2 29.302 430 267 10 103 519 73 478 3.83e-60 206
Msa0370860 AT5G05260.1 29.412 510 295 13 18 502 4 473 4.21e-58 201
Msa0370860 AT1G58260.1 25.553 497 338 12 17 489 3 491 3.51e-57 199
Msa0370860 AT2G27010.1 28.602 472 286 12 56 515 46 478 3.74e-57 199
Msa0370860 AT2G45580.3 33.602 372 223 8 52 413 45 402 3.99e-55 191
Msa0370860 AT3G20960.1 28.993 407 260 9 121 518 15 401 2.69e-54 189
Msa0370860 AT3G20120.2 31.008 387 239 8 141 519 2 368 3.20e-54 187
Msa0370860 AT3G20120.3 31.008 387 239 8 141 519 2 368 3.20e-54 187
Msa0370860 AT3G20120.1 31.008 387 239 8 141 519 2 368 3.20e-54 187
Msa0370860 AT3G20090.1 31.266 387 237 9 141 518 2 368 3.52e-54 187
Msa0370860 AT4G15380.1 26.134 463 309 10 72 525 70 508 1.82e-53 189
Msa0370860 AT1G66540.2 33.535 331 190 10 192 514 1 309 2.69e-52 181
Msa0370860 AT1G64940.1 27.984 511 323 18 28 514 12 501 2.76e-51 183
Msa0370860 AT2G25160.2 30.982 397 252 11 22 407 9 394 1.07e-50 179
Msa0370860 AT1G64930.1 27.789 493 318 16 41 514 28 501 3.47e-49 177
Msa0370860 AT5G36220.2 31.818 352 211 9 183 525 25 356 8.76e-49 172
Msa0370860 AT1G16410.1 24.858 527 354 13 22 520 16 528 5.79e-48 174
Msa0370860 AT3G10560.1 26.782 519 308 16 1 486 1 480 2.15e-47 172
Msa0370860 AT1G16400.1 24.649 499 342 11 45 522 44 529 2.66e-47 173
Msa0370860 AT1G64950.1 27.383 493 319 16 41 514 28 500 8.32e-47 171
Msa0370860 AT5G04630.1 26.446 484 319 14 21 486 12 476 2.33e-46 169
Msa0370860 AT1G11600.1 27.181 493 308 12 24 486 7 478 2.82e-46 169
Msa0370860 AT2G12190.1 27.530 494 313 17 41 511 28 499 1.29e-45 167
Msa0370860 AT3G03470.1 26.181 508 334 13 16 502 2 489 9.68e-45 165
Msa0370860 AT3G20080.4 26.566 399 265 9 141 529 2 382 3.19e-44 161
Msa0370860 AT3G20080.5 26.566 399 265 9 141 529 2 382 3.19e-44 161
Msa0370860 AT3G20080.6 26.566 399 265 9 141 529 2 382 3.19e-44 161
Msa0370860 AT3G20080.3 26.566 399 265 9 141 529 2 382 3.19e-44 161
Msa0370860 AT5G61320.1 27.214 463 286 14 66 514 55 480 7.42e-43 160
Msa0370860 AT3G20935.1 37.559 213 122 4 312 519 126 332 1.72e-42 155
Msa0370860 AT5G04660.1 26.616 526 342 16 13 515 1 505 2.11e-42 159
Msa0370860 AT1G13090.1 31.488 289 178 5 36 317 19 294 2.24e-42 154
Msa0370860 AT3G10570.1 25.397 441 303 12 57 486 55 480 1.39e-40 154
Msa0370860 AT3G25180.2 25.888 394 259 8 13 390 4 380 1.27e-39 149
Msa0370860 AT4G20235.1 32.616 279 136 8 22 287 2 241 6.37e-37 140
Msa0370860 AT4G20235.1 37.226 137 73 3 353 488 206 330 5.68e-18 85.9
Msa0370860 AT1G64900.1 26.681 476 319 15 52 514 38 496 4.61e-36 141
Msa0370860 AT5G35917.1 25.485 412 268 10 43 437 40 429 6.91e-36 140
Msa0370860 AT5G25900.1 26.763 482 321 16 44 514 40 500 2.06e-35 139
Msa0370860 AT2G45560.2 31.633 294 177 8 17 296 4 287 2.94e-35 135
Msa0370860 AT2G45560.3 31.967 244 148 5 17 250 4 239 2.42e-33 127
Msa0370860 AT1G16410.2 24.088 411 276 11 22 408 16 414 3.00e-32 129
Msa0370860 AT3G53305.1 44.242 165 81 3 358 522 175 328 6.23e-32 126
Msa0370860 AT3G53305.1 28.571 182 110 5 80 253 1 170 5.66e-16 79.7
Msa0370860 AT1G31800.1 24.672 458 307 14 76 516 139 575 3.49e-30 125
Msa0370860 AT3G53130.1 23.368 475 312 17 28 481 62 505 2.10e-27 116
Msa0370860 AT3G14680.1 23.251 443 294 14 74 495 90 507 1.22e-26 114
Msa0370860 AT3G14620.1 25.917 436 273 16 74 494 94 494 5.95e-26 111
Msa0370860 AT5G52400.1 23.874 444 284 15 57 485 85 489 9.08e-26 111
Msa0370860 AT2G26170.1 22.645 499 311 16 22 480 21 484 6.44e-25 108
Msa0370860 AT2G26710.1 23.529 442 299 13 69 500 88 500 1.14e-24 107
Msa0370860 AT3G14630.1 23.230 452 294 15 68 495 81 503 2.09e-24 107
Msa0370860 AT3G14690.1 23.709 426 296 15 74 494 90 491 2.90e-24 106
Msa0370860 AT3G14630.2 23.230 452 294 15 68 495 136 558 3.27e-24 107
Msa0370860 AT3G14690.2 23.709 426 296 15 74 494 125 526 3.45e-24 106
Msa0370860 AT3G14610.1 23.423 444 289 16 76 495 91 507 5.51e-24 105
Msa0370860 AT2G45510.1 23.729 413 257 13 134 521 123 502 7.75e-24 105
Msa0370860 AT3G14640.1 22.788 452 305 17 64 495 82 509 1.27e-23 104
Msa0370860 AT3G14640.2 22.788 452 305 17 64 495 104 531 1.56e-23 104
Msa0370860 AT3G14660.1 22.951 427 298 14 74 494 90 491 2.87e-23 103
Msa0370860 AT3G26125.1 24.934 377 239 11 135 481 136 498 3.62e-23 103
Msa0370860 AT1G11680.1 28.146 302 186 10 195 488 180 458 5.50e-23 102
Msa0370860 AT3G14650.1 24.528 424 295 15 74 494 90 491 7.54e-23 102
Msa0370860 AT2G44890.1 24.318 440 269 15 109 521 100 502 2.13e-22 100
Msa0370860 AT5G38450.1 24.722 449 299 15 54 494 78 495 1.38e-21 98.6
Msa0370860 AT3G14660.2 23.706 367 254 12 130 494 3 345 4.07e-21 95.5
Msa0370860 AT5G24900.1 22.907 454 313 18 54 494 77 506 8.01e-21 96.3
Msa0370860 AT5G24910.1 22.520 373 259 13 134 494 157 511 2.44e-20 94.7
Msa0370860 AT1G19630.1 21.811 486 318 18 22 488 6 448 2.92e-20 94.4
Msa0370860 AT1G13140.1 23.733 375 258 10 134 490 135 499 6.95e-20 93.6
Msa0370860 AT5G24900.2 23.592 373 254 15 134 494 36 389 8.07e-20 92.4
Msa0370860 AT4G15110.1 28.000 225 134 5 308 505 344 567 1.00e-19 93.2
Msa0370860 AT1G19630.3 22.270 467 301 18 22 469 6 429 2.63e-19 91.3
Msa0370860 AT5G35920.1 38.739 111 67 1 377 486 6 116 5.52e-19 84.3
Msa0370860 AT2G44890.2 22.529 435 265 14 109 521 100 484 7.64e-19 90.1
Msa0370860 AT2G26170.2 30.288 208 136 5 277 480 199 401 1.40e-18 89.0
Msa0370860 AT2G29090.2 22.912 467 290 12 39 488 43 456 1.77e-17 85.5
Msa0370860 AT2G29090.1 22.912 467 290 12 39 488 43 456 1.77e-17 85.5
Msa0370860 AT1G57750.1 24.101 278 189 9 246 512 231 497 1.83e-17 85.9
Msa0370860 AT4G27710.1 21.205 448 323 14 69 508 87 512 6.42e-17 84.0
Msa0370860 AT2G28850.1 29.189 185 116 7 310 487 283 459 1.72e-16 82.8
Msa0370860 AT1G13150.1 21.833 371 264 9 135 488 129 490 4.42e-16 81.6
Msa0370860 AT1G13140.2 23.306 369 241 10 134 490 135 473 4.83e-16 81.3
Msa0370860 AT1G75130.1 27.429 175 120 3 321 494 314 482 5.62e-16 81.3
Msa0370860 AT2G42850.1 21.957 419 280 13 75 488 81 457 1.05e-15 80.1
Msa0370860 AT1G67110.1 23.165 436 300 14 64 494 84 489 1.27e-15 80.1
Msa0370860 AT2G28860.1 28.649 185 117 7 310 487 283 459 1.89e-15 79.3
Msa0370860 AT2G34490.1 28.182 220 141 8 277 487 252 463 2.03e-15 79.3
Msa0370860 AT1G19630.2 22.197 437 284 17 22 439 6 405 3.91e-15 78.2
Msa0370860 AT2G32440.2 25.463 216 150 4 269 481 247 454 5.03e-15 78.2
Msa0370860 AT2G32440.1 25.463 216 150 4 269 481 247 454 5.03e-15 78.2
Msa0370860 AT2G46960.2 21.647 425 308 12 64 484 82 485 6.27e-15 77.8
Msa0370860 AT5G05690.1 25.743 202 134 5 290 486 251 441 2.39e-14 75.9
Msa0370860 AT5G05690.3 25.743 202 134 5 290 486 132 322 2.40e-14 75.1
Msa0370860 AT2G29090.3 26.761 213 143 5 280 488 158 361 2.56e-14 75.1
Msa0370860 AT3G50660.1 24.670 227 146 5 274 488 274 487 2.89e-14 75.9
Msa0370860 AT5G02900.1 22.800 250 180 5 253 490 205 453 4.73e-14 75.1
Msa0370860 AT1G57750.2 24.747 198 135 6 246 438 231 419 6.81e-14 74.3
Msa0370860 AT1G24540.1 22.609 230 163 6 265 481 259 486 8.82e-14 74.3
Msa0370860 AT3G56630.1 24.332 374 244 15 134 489 119 471 1.20e-13 73.9
Msa0370860 AT1G65340.1 22.764 246 180 5 250 488 234 476 1.20e-13 73.9
Msa0370860 AT2G46960.1 24.887 221 159 4 265 484 155 369 1.90e-13 72.8
Msa0370860 AT1G78490.1 23.542 463 289 19 45 488 35 451 2.27e-13 72.8
Msa0370860 AT1G34540.1 23.118 372 251 14 134 489 119 471 2.33e-13 72.8
Msa0370860 AT4G39490.1 21.818 275 175 7 267 509 246 512 2.57e-13 72.8
Msa0370860 AT4G20235.2 36.458 96 55 2 184 276 8 100 3.05e-13 67.8
Msa0370860 AT5G23190.1 21.859 398 274 12 135 509 153 536 3.23e-13 72.8
Msa0370860 AT4G39500.2 22.180 266 187 7 266 513 255 518 5.18e-13 72.0
Msa0370860 AT2G46950.1 21.379 435 316 15 63 494 138 549 6.20e-13 71.6
Msa0370860 AT4G39500.1 22.180 266 187 7 266 513 205 468 8.54e-13 70.9
Msa0370860 AT2G21910.1 22.556 266 183 8 270 529 260 508 2.41e-12 69.7
Msa0370860 AT4G39510.1 22.846 267 174 8 266 509 244 501 3.10e-12 69.3
Msa0370860 AT4G32170.1 23.571 280 177 11 254 511 239 503 3.34e-12 69.3
Msa0370860 AT5G36110.1 24.862 181 127 3 310 487 274 448 6.46e-12 68.2
Msa0370860 AT5G63450.1 21.795 468 306 16 46 484 35 471 1.74e-11 67.0
Msa0370860 AT3G01900.1 22.646 393 258 13 134 504 120 488 1.79e-11 67.0
Msa0370860 AT5G63450.2 21.795 468 306 16 46 484 93 529 2.13e-11 67.0
Msa0370860 AT2G45970.1 23.963 217 142 7 265 465 251 460 2.93e-11 66.2
Msa0370860 AT3G30290.1 26.291 213 132 7 279 482 170 366 3.16e-11 65.9

Find 99 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTACTTCTTCTTCTCTTA+TGG 0.124858 3_1:+68804297 None:intergenic
TGGCCAAATATCTGAATTTA+AGG 0.135625 3_1:-68804017 Msa0370860:CDS
GGTTGTTCTTCAAATCTTTC+AGG 0.142225 3_1:+68802964 None:intergenic
TGGCCTTAAATTCAGATATT+TGG 0.152295 3_1:+68804014 None:intergenic
TTCAGAGGGATCCTGAATTT+TGG 0.179193 3_1:-68803008 Msa0370860:CDS
TGTCCTTTAAAATCAATTTC+TGG 0.180373 3_1:+68802943 None:intergenic
TTATCTGATGTGAGAGTTAC+AGG 0.222448 3_1:-68803078 Msa0370860:CDS
AGAGATTGTTGATACTTTAA+AGG 0.224680 3_1:-68804275 Msa0370860:CDS
TCTGGCTTGTTCCAAAATTC+AGG 0.263804 3_1:+68802997 None:intergenic
TGCTTGCTAATCTTCTCTAT+TGG 0.281732 3_1:-68802840 Msa0370860:CDS
CCACCAAAGCTACCAATAAT+TGG 0.295248 3_1:-68804628 Msa0370860:CDS
GGTTGGATTGACATTCTTAC+TGG 0.295645 3_1:-68804037 Msa0370860:CDS
TGGTGAAGATTGCCAATTAT+TGG 0.313625 3_1:+68804616 None:intergenic
ATAGTTTCAAGGTGTGTTCT+TGG 0.315150 3_1:-68804166 Msa0370860:CDS
CAATTTCAGGACATGTTTGC+TGG 0.329945 3_1:-68803321 Msa0370860:intron
CCTGGAATTTCATTTGGACT+TGG 0.334625 3_1:-68802877 Msa0370860:CDS
GGATGTCCTGGAATTTCATT+TGG 0.335119 3_1:-68802883 Msa0370860:CDS
AGTGGTAGCTTTGGAGAGTT+AGG 0.341525 3_1:-68804118 Msa0370860:CDS
GCTGCAAATATCATTCTCTA+TGG 0.343330 3_1:-68804424 Msa0370860:CDS
TTGCCAATTATTGGTAGCTT+TGG 0.355934 3_1:+68804625 None:intergenic
GAACCTACACTACACTCATT+TGG 0.367436 3_1:-68802718 Msa0370860:CDS
ATTAGATTCTTTCTTTGATC+AGG 0.371825 3_1:-68803981 Msa0370860:CDS
CTGTCTCCACTCTTCTCCAT+AGG 0.386930 3_1:+68804378 None:intergenic
CCTTGAAACTATGTTATTTG+AGG 0.391383 3_1:+68804177 None:intergenic
CAATACATTCCATTTGGTGC+TGG 0.396750 3_1:-68802913 Msa0370860:CDS
GGAATCAATATTCACATGAT+AGG 0.397867 3_1:+68802679 None:intergenic
TGCATATGTGCACCAATCTT+AGG 0.398364 3_1:+68802802 None:intergenic
CAATTAGCAGCTTTCAGTGT+TGG 0.399155 3_1:-68804079 Msa0370860:CDS
CTTTCAGGAATGAACTCATC+TGG 0.400650 3_1:+68802979 None:intergenic
GCTAGTGAAGCAAAAGATAA+TGG 0.408605 3_1:+68804705 None:intergenic
GATTTGCAATACATTCCATT+TGG 0.411444 3_1:-68802919 Msa0370860:CDS
ATCTTCTCTATTGGTTTGAC+TGG 0.411542 3_1:-68802831 Msa0370860:CDS
CCAATCAGATAAGGACTTTG+TGG 0.426679 3_1:-68803918 Msa0370860:CDS
GACTGGAAGCTGCCTAAGAT+TGG 0.427640 3_1:-68802814 Msa0370860:CDS
ATGATATTTGCAGCCGTGTT+CGG 0.427656 3_1:+68804433 None:intergenic
CCAGATGGTAGTGGTAGCTT+TGG 0.430793 3_1:-68804127 Msa0370860:CDS
TAGAGAGTGCATGGAAGGAT+TGG 0.435231 3_1:+68804575 None:intergenic
CCAATTATTGGTAGCTTTGG+TGG 0.444862 3_1:+68804628 None:intergenic
CCTCTTCTCCCAGCACCAAA+TGG 0.448093 3_1:+68802904 None:intergenic
CAGGACATGTTTGCTGGAGG+AGG 0.449764 3_1:-68803315 Msa0370860:CDS
CCACAAAGTCCTTATCTGAT+TGG 0.457087 3_1:+68803918 None:intergenic
ATTGGTAGCTTTGGTGGTGA+AGG 0.467594 3_1:+68804634 None:intergenic
AAGAAATAAGAAAAGTTGTT+GGG 0.468506 3_1:-68803215 Msa0370860:CDS
CCAAGTCCAAATGAAATTCC+AGG 0.468686 3_1:+68802877 None:intergenic
GAAGAAATAAGAAAAGTTGT+TGG 0.479829 3_1:-68803216 Msa0370860:CDS
AATACATTCCATTTGGTGCT+GGG 0.481481 3_1:-68802912 Msa0370860:CDS
AGAATCTAATGCACAGAAAG+TGG 0.482406 3_1:+68803994 None:intergenic
TAACATCAAAGCAATCCTAA+TGG 0.484328 3_1:-68803840 Msa0370860:intron
CCTCAAATAACATAGTTTCA+AGG 0.489934 3_1:-68804177 Msa0370860:CDS
GTAGCTTTGGAGAGTTAGGA+AGG 0.492770 3_1:-68804114 Msa0370860:CDS
GAGAAGAGTGGAGACAGAGA+AGG 0.500222 3_1:-68804372 Msa0370860:CDS
AATATTCACATGATAGGTAA+TGG 0.501708 3_1:+68802685 None:intergenic
AGCCGTGTTCGGAGGCTTGT+TGG 0.503354 3_1:+68804444 None:intergenic
CCTCTCATGATGATGAAACT+AGG 0.506281 3_1:-68804541 Msa0370860:CDS
TGTCTCCACTCTTCTCCATA+GGG 0.506383 3_1:+68804379 None:intergenic
CTAGGTATCAAAAGAGGAGC+AGG 0.506899 3_1:+68803108 None:intergenic
ACTGATGAAACAACAATGGC+TGG 0.509439 3_1:+68804511 None:intergenic
AACATTTGCTTTAGAGCTAG+TGG 0.510017 3_1:+68804757 None:intergenic
ATAGACATGAGTGAGATTCA+TGG 0.519688 3_1:-68802775 Msa0370860:CDS
CCATTTGGTGCTGGGAGAAG+AGG 0.523010 3_1:-68802904 Msa0370860:CDS
TGTTGTTTCATCAGTAGAAG+TGG 0.526427 3_1:-68804503 Msa0370860:CDS
ATTGGCAATCTTCACCAACT+TGG 0.531021 3_1:-68804610 Msa0370860:CDS
TGTTGGGTATAAATCAAAAG+TGG 0.533027 3_1:-68803199 Msa0370860:CDS
ATGTCAATCCAACCCAATGA+AGG 0.533732 3_1:+68804046 None:intergenic
TAGACATGAGTGAGATTCAT+GGG 0.540967 3_1:-68802774 Msa0370860:CDS
GCTGGGAGAAGAGGATGTCC+TGG 0.548707 3_1:-68802895 Msa0370860:CDS
TGTTGGAGAAAACAACATCA+TGG 0.551000 3_1:+68804461 None:intergenic
CCAAAGCTACCACTACCATC+TGG 0.552334 3_1:+68804127 None:intergenic
TGAAGGTGGCCAATCAGATA+AGG 0.557711 3_1:-68803927 Msa0370860:CDS
ATTCTACTTCAAGTTCAAGA+TGG 0.558795 3_1:-68803893 Msa0370860:CDS
GACGTCGCTTTAGCACCCTA+TGG 0.567926 3_1:-68804394 Msa0370860:CDS
GGTAGCTTTGGTGGTGAAGG+AGG 0.568125 3_1:+68804637 None:intergenic
CTCCAACAAGCCTCCGAACA+CGG 0.577478 3_1:-68804446 Msa0370860:CDS
CTTCTTCAACACTTCTCGAG+TGG 0.577953 3_1:-68803287 Msa0370860:CDS
GTTTCTCTAGGTATCAAAAG+AGG 0.578497 3_1:+68803102 None:intergenic
TGAATGCATGGTCAATTCAG+AGG 0.582045 3_1:-68803023 Msa0370860:CDS
ACATCAGATAAAGTTTCTCT+AGG 0.582784 3_1:+68803090 None:intergenic
TATGATACACCAGATGGTAG+TGG 0.591287 3_1:-68804136 Msa0370860:CDS
CAAGAGTGTTTGTGAATGCA+TGG 0.594261 3_1:-68803035 Msa0370860:CDS
GATCCAAATGAGTGTAGTGT+AGG 0.594701 3_1:+68802715 None:intergenic
GGTGTGGTAGTGTGCCAAGT+TGG 0.595918 3_1:+68804596 None:intergenic
AGGATGAAGAAGAGTGAAGG+TGG 0.602040 3_1:-68803941 Msa0370860:CDS
CCTAGTTTCATCATCATGAG+AGG 0.603072 3_1:+68804541 None:intergenic
TTCTACTGATGAAACAACAA+TGG 0.603926 3_1:+68804507 None:intergenic
TATCTGATGTGAGAGTTACA+GGG 0.604010 3_1:-68803077 Msa0370860:CDS
ATATTTGCAGCCGTGTTCGG+AGG 0.611701 3_1:+68804436 None:intergenic
AGTGTAGGTTCAAGATGAAG+TGG 0.613728 3_1:+68802730 None:intergenic
TTTCAGGACATGTTTGCTGG+AGG 0.614507 3_1:-68803318 Msa0370860:intron
AAGAGGATGAAGAAGAGTGA+AGG 0.614640 3_1:-68803944 Msa0370860:CDS
AGGTGATTGCAGATCACAAG+AGG 0.623811 3_1:-68803961 Msa0370860:CDS
GGACATTTGCTGAACTCATG+AGG 0.623927 3_1:-68803266 Msa0370860:CDS
GAATGCATGGTCAATTCAGA+GGG 0.624878 3_1:-68803022 Msa0370860:CDS
TCAGTTTAAGCACAAACACA+AGG 0.634179 3_1:+68804683 None:intergenic
TTGATGTTATCATTTGTGAG+TGG 0.638647 3_1:+68803854 None:intergenic
GGTATCAAAAGAGGAGCAGG+TGG 0.645016 3_1:+68803111 None:intergenic
CTAGTTTCATCATCATGAGA+GGG 0.648310 3_1:+68804542 None:intergenic
CAAAAGTATGATACACCAGA+TGG 0.650375 3_1:-68804142 Msa0370860:CDS
TAGCACCCTATGGAGAAGAG+TGG 0.654782 3_1:-68804384 Msa0370860:CDS
AGTGCATGGAAGGATTGGTG+TGG 0.705403 3_1:+68804580 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGGTTTTTGAATATTTCTT+TGG + chr3_1:68802985-68803004 None:intergenic 20.0%
!! AATAGCGAAAAAAATAATAG+AGG + chr3_1:68803658-68803677 None:intergenic 20.0%
!! TCAAATAAACTAAATCAAAC+AGG + chr3_1:68803830-68803849 None:intergenic 20.0%
!!! ATTATTTTCATAAACTATCC+TGG + chr3_1:68803956-68803975 None:intergenic 20.0%
!!! ATAAACTATTTTCATGACAA+GGG + chr3_1:68804008-68804027 None:intergenic 20.0%
!! AAGAAATAAGAAAAGTTGTT+GGG - chr3_1:68804247-68804266 Msa0370860:CDS 20.0%
!!! ATGGTTTTTGAATATTTCTT+TGG + chr3_1:68802985-68803004 None:intergenic 20.0%
!! AATAGCGAAAAAAATAATAG+AGG + chr3_1:68803658-68803677 None:intergenic 20.0%
!! TCAAATAAACTAAATCAAAC+AGG + chr3_1:68803830-68803849 None:intergenic 20.0%
!!! ATTATTTTCATAAACTATCC+TGG + chr3_1:68803956-68803975 None:intergenic 20.0%
!!! ATAAACTATTTTCATGACAA+GGG + chr3_1:68804008-68804027 None:intergenic 20.0%
!! AAGAAATAAGAAAAGTTGTT+GGG - chr3_1:68804247-68804266 Msa0370860:CDS 20.0%
! AGAGATTGTTGATACTTTAA+AGG - chr3_1:68803187-68803206 Msa0370860:CDS 25.0%
! ATTAGATTCTTTCTTTGATC+AGG - chr3_1:68803481-68803500 Msa0370860:intron 25.0%
! GATTTAGATTGAGCATAATT+CGG - chr3_1:68803706-68803725 Msa0370860:intron 25.0%
! TAGTGATATAGTCTAAATAG+TGG + chr3_1:68803797-68803816 None:intergenic 25.0%
! CTAAATCAAACAGGAAAAAT+TGG + chr3_1:68803821-68803840 None:intergenic 25.0%
!! CATAAACTATTTTCATGACA+AGG + chr3_1:68804009-68804028 None:intergenic 25.0%
!!! TTATGCTCTTGTTTTAAGTT+GGG + chr3_1:68804105-68804124 None:intergenic 25.0%
!!! TTTATGCTCTTGTTTTAAGT+TGG + chr3_1:68804106-68804125 None:intergenic 25.0%
!!! CAACTTTTCTTATTTCTTCT+TGG + chr3_1:68804245-68804264 None:intergenic 25.0%
! GAAGAAATAAGAAAAGTTGT+TGG - chr3_1:68804246-68804265 Msa0370860:CDS 25.0%
!!! CAACCAGAAATTGATTTTAA+AGG - chr3_1:68804516-68804535 Msa0370860:CDS 25.0%
!!! TGTCCTTTAAAATCAATTTC+TGG + chr3_1:68804522-68804541 None:intergenic 25.0%
! AGAGATTGTTGATACTTTAA+AGG - chr3_1:68803187-68803206 Msa0370860:CDS 25.0%
! ATTAGATTCTTTCTTTGATC+AGG - chr3_1:68803481-68803500 Msa0370860:intron 25.0%
! GATTTAGATTGAGCATAATT+CGG - chr3_1:68803706-68803725 Msa0370860:intron 25.0%
! TAGTGATATAGTCTAAATAG+TGG + chr3_1:68803797-68803816 None:intergenic 25.0%
! CTAAATCAAACAGGAAAAAT+TGG + chr3_1:68803821-68803840 None:intergenic 25.0%
!! CATAAACTATTTTCATGACA+AGG + chr3_1:68804009-68804028 None:intergenic 25.0%
!!! TTATGCTCTTGTTTTAAGTT+GGG + chr3_1:68804105-68804124 None:intergenic 25.0%
!!! TTTATGCTCTTGTTTTAAGT+TGG + chr3_1:68804106-68804125 None:intergenic 25.0%
!!! CAACTTTTCTTATTTCTTCT+TGG + chr3_1:68804245-68804264 None:intergenic 25.0%
! GAAGAAATAAGAAAAGTTGT+TGG - chr3_1:68804246-68804265 Msa0370860:CDS 25.0%
!!! CAACCAGAAATTGATTTTAA+AGG - chr3_1:68804516-68804535 Msa0370860:CDS 25.0%
!!! TGTCCTTTAAAATCAATTTC+TGG + chr3_1:68804522-68804541 None:intergenic 25.0%
!!! CATATTTTTTAGAGAGTGCA+TGG + chr3_1:68802899-68802918 None:intergenic 30.0%
! CATGCACTCTCTAAAAAATA+TGG - chr3_1:68802897-68802916 Msa0370860:CDS 30.0%
TTCTACTGATGAAACAACAA+TGG + chr3_1:68802958-68802977 None:intergenic 30.0%
! CCTTGAAACTATGTTATTTG+AGG + chr3_1:68803288-68803307 None:intergenic 30.0%
CCTCAAATAACATAGTTTCA+AGG - chr3_1:68803285-68803304 Msa0370860:CDS 30.0%
TGGCCAAATATCTGAATTTA+AGG - chr3_1:68803445-68803464 Msa0370860:intron 30.0%
! TGGCCTTAAATTCAGATATT+TGG + chr3_1:68803451-68803470 None:intergenic 30.0%
! ATTCTACTTCAAGTTCAAGA+TGG - chr3_1:68803569-68803588 Msa0370860:intron 30.0%
TTGATGTTATCATTTGTGAG+TGG + chr3_1:68803611-68803630 None:intergenic 30.0%
TAACATCAAAGCAATCCTAA+TGG - chr3_1:68803622-68803641 Msa0370860:intron 30.0%
!! CTTATTTTCATAAACTCTCC+AGG - chr3_1:68803935-68803954 Msa0370860:CDS 30.0%
! ATCTCCATTTTCACAATTTC+AGG - chr3_1:68804128-68804147 Msa0370860:CDS 30.0%
ATGTCCTGAAATTGTGAAAA+TGG + chr3_1:68804135-68804154 None:intergenic 30.0%
TGTTGGGTATAAATCAAAAG+TGG - chr3_1:68804263-68804282 Msa0370860:CDS 30.0%
ACATCAGATAAAGTTTCTCT+AGG + chr3_1:68804375-68804394 None:intergenic 30.0%
!!! ACAAACACTCTTGTTTTTGA+TGG + chr3_1:68804420-68804439 None:intergenic 30.0%
GATTTGCAATACATTCCATT+TGG - chr3_1:68804543-68804562 Msa0370860:CDS 30.0%
!!! CATATTTTTTAGAGAGTGCA+TGG + chr3_1:68802899-68802918 None:intergenic 30.0%
! CATGCACTCTCTAAAAAATA+TGG - chr3_1:68802897-68802916 Msa0370860:CDS 30.0%
TTCTACTGATGAAACAACAA+TGG + chr3_1:68802958-68802977 None:intergenic 30.0%
! CCTTGAAACTATGTTATTTG+AGG + chr3_1:68803288-68803307 None:intergenic 30.0%
CCTCAAATAACATAGTTTCA+AGG - chr3_1:68803285-68803304 Msa0370860:CDS 30.0%
TGGCCAAATATCTGAATTTA+AGG - chr3_1:68803445-68803464 Msa0370860:intron 30.0%
! TGGCCTTAAATTCAGATATT+TGG + chr3_1:68803451-68803470 None:intergenic 30.0%
! ATTCTACTTCAAGTTCAAGA+TGG - chr3_1:68803569-68803588 Msa0370860:intron 30.0%
TTGATGTTATCATTTGTGAG+TGG + chr3_1:68803611-68803630 None:intergenic 30.0%
TAACATCAAAGCAATCCTAA+TGG - chr3_1:68803622-68803641 Msa0370860:intron 30.0%
!! CTTATTTTCATAAACTCTCC+AGG - chr3_1:68803935-68803954 Msa0370860:CDS 30.0%
! ATCTCCATTTTCACAATTTC+AGG - chr3_1:68804128-68804147 Msa0370860:CDS 30.0%
ATGTCCTGAAATTGTGAAAA+TGG + chr3_1:68804135-68804154 None:intergenic 30.0%
TGTTGGGTATAAATCAAAAG+TGG - chr3_1:68804263-68804282 Msa0370860:CDS 30.0%
ACATCAGATAAAGTTTCTCT+AGG + chr3_1:68804375-68804394 None:intergenic 30.0%
!!! ACAAACACTCTTGTTTTTGA+TGG + chr3_1:68804420-68804439 None:intergenic 30.0%
GATTTGCAATACATTCCATT+TGG - chr3_1:68804543-68804562 Msa0370860:CDS 30.0%
!! AACATTTGCTTTAGAGCTAG+TGG + chr3_1:68802708-68802727 None:intergenic 35.0%
GCTAGTGAAGCAAAAGATAA+TGG + chr3_1:68802760-68802779 None:intergenic 35.0%
TCAGTTTAAGCACAAACACA+AGG + chr3_1:68802782-68802801 None:intergenic 35.0%
! TTGCCAATTATTGGTAGCTT+TGG + chr3_1:68802840-68802859 None:intergenic 35.0%
TGGTGAAGATTGCCAATTAT+TGG + chr3_1:68802849-68802868 None:intergenic 35.0%
!!! TTTTTTAGAGAGTGCATGGA+AGG + chr3_1:68802895-68802914 None:intergenic 35.0%
CTAGTTTCATCATCATGAGA+GGG + chr3_1:68802923-68802942 None:intergenic 35.0%
!! TGTTGTTTCATCAGTAGAAG+TGG - chr3_1:68802959-68802978 Msa0370860:CDS 35.0%
TGTTGGAGAAAACAACATCA+TGG + chr3_1:68803004-68803023 None:intergenic 35.0%
GCTGCAAATATCATTCTCTA+TGG - chr3_1:68803038-68803057 Msa0370860:CDS 35.0%
! TGCTACTTCTTCTTCTCTTA+TGG + chr3_1:68803168-68803187 None:intergenic 35.0%
ATAGTTTCAAGGTGTGTTCT+TGG - chr3_1:68803296-68803315 Msa0370860:CDS 35.0%
! CAAAAGTATGATACACCAGA+TGG - chr3_1:68803320-68803339 Msa0370860:intron 35.0%
! TGGAGATCTTTTTCCTTCAT+TGG - chr3_1:68803403-68803422 Msa0370860:intron 35.0%
! GGAGATCTTTTTCCTTCATT+GGG - chr3_1:68803404-68803423 Msa0370860:intron 35.0%
! ATCTTTTTCCTTCATTGGGT+TGG - chr3_1:68803408-68803427 Msa0370860:intron 35.0%
AGAATCTAATGCACAGAAAG+TGG + chr3_1:68803471-68803490 None:intergenic 35.0%
CTAATTCCACTTCACAGAAT+CGG - chr3_1:68803731-68803750 Msa0370860:intron 35.0%
!! GCTTGCACATAAGTTGTTTT+CGG - chr3_1:68803912-68803931 Msa0370860:CDS 35.0%
GTTTCTCTAGGTATCAAAAG+AGG + chr3_1:68804363-68804382 None:intergenic 35.0%
TTATCTGATGTGAGAGTTAC+AGG - chr3_1:68804384-68804403 Msa0370860:CDS 35.0%
TATCTGATGTGAGAGTTACA+GGG - chr3_1:68804385-68804404 Msa0370860:CDS 35.0%
GGTTGTTCTTCAAATCTTTC+AGG + chr3_1:68804501-68804520 None:intergenic 35.0%
!! AATACATTCCATTTGGTGCT+GGG - chr3_1:68804550-68804569 Msa0370860:CDS 35.0%
! TGCTTGCTAATCTTCTCTAT+TGG - chr3_1:68804622-68804641 Msa0370860:CDS 35.0%
!! ATCTTCTCTATTGGTTTGAC+TGG - chr3_1:68804631-68804650 Msa0370860:CDS 35.0%
ATAGACATGAGTGAGATTCA+TGG - chr3_1:68804687-68804706 Msa0370860:CDS 35.0%
TAGACATGAGTGAGATTCAT+GGG - chr3_1:68804688-68804707 Msa0370860:CDS 35.0%
!! AACATTTGCTTTAGAGCTAG+TGG + chr3_1:68802708-68802727 None:intergenic 35.0%
GCTAGTGAAGCAAAAGATAA+TGG + chr3_1:68802760-68802779 None:intergenic 35.0%
TCAGTTTAAGCACAAACACA+AGG + chr3_1:68802782-68802801 None:intergenic 35.0%
! TTGCCAATTATTGGTAGCTT+TGG + chr3_1:68802840-68802859 None:intergenic 35.0%
TGGTGAAGATTGCCAATTAT+TGG + chr3_1:68802849-68802868 None:intergenic 35.0%
!!! TTTTTTAGAGAGTGCATGGA+AGG + chr3_1:68802895-68802914 None:intergenic 35.0%
CTAGTTTCATCATCATGAGA+GGG + chr3_1:68802923-68802942 None:intergenic 35.0%
!! TGTTGTTTCATCAGTAGAAG+TGG - chr3_1:68802959-68802978 Msa0370860:CDS 35.0%
TGTTGGAGAAAACAACATCA+TGG + chr3_1:68803004-68803023 None:intergenic 35.0%
GCTGCAAATATCATTCTCTA+TGG - chr3_1:68803038-68803057 Msa0370860:CDS 35.0%
! TGCTACTTCTTCTTCTCTTA+TGG + chr3_1:68803168-68803187 None:intergenic 35.0%
ATAGTTTCAAGGTGTGTTCT+TGG - chr3_1:68803296-68803315 Msa0370860:CDS 35.0%
! CAAAAGTATGATACACCAGA+TGG - chr3_1:68803320-68803339 Msa0370860:intron 35.0%
! TGGAGATCTTTTTCCTTCAT+TGG - chr3_1:68803403-68803422 Msa0370860:intron 35.0%
! GGAGATCTTTTTCCTTCATT+GGG - chr3_1:68803404-68803423 Msa0370860:intron 35.0%
! ATCTTTTTCCTTCATTGGGT+TGG - chr3_1:68803408-68803427 Msa0370860:intron 35.0%
AGAATCTAATGCACAGAAAG+TGG + chr3_1:68803471-68803490 None:intergenic 35.0%
CTAATTCCACTTCACAGAAT+CGG - chr3_1:68803731-68803750 Msa0370860:intron 35.0%
!! GCTTGCACATAAGTTGTTTT+CGG - chr3_1:68803912-68803931 Msa0370860:CDS 35.0%
GTTTCTCTAGGTATCAAAAG+AGG + chr3_1:68804363-68804382 None:intergenic 35.0%
TTATCTGATGTGAGAGTTAC+AGG - chr3_1:68804384-68804403 Msa0370860:CDS 35.0%
TATCTGATGTGAGAGTTACA+GGG - chr3_1:68804385-68804404 Msa0370860:CDS 35.0%
GGTTGTTCTTCAAATCTTTC+AGG + chr3_1:68804501-68804520 None:intergenic 35.0%
!! AATACATTCCATTTGGTGCT+GGG - chr3_1:68804550-68804569 Msa0370860:CDS 35.0%
! TGCTTGCTAATCTTCTCTAT+TGG - chr3_1:68804622-68804641 Msa0370860:CDS 35.0%
!! ATCTTCTCTATTGGTTTGAC+TGG - chr3_1:68804631-68804650 Msa0370860:CDS 35.0%
ATAGACATGAGTGAGATTCA+TGG - chr3_1:68804687-68804706 Msa0370860:CDS 35.0%
TAGACATGAGTGAGATTCAT+GGG - chr3_1:68804688-68804707 Msa0370860:CDS 35.0%
!! CCAATTATTGGTAGCTTTGG+TGG + chr3_1:68802837-68802856 None:intergenic 40.0%
CCACCAAAGCTACCAATAAT+TGG - chr3_1:68802834-68802853 Msa0370860:CDS 40.0%
ATTGGCAATCTTCACCAACT+TGG - chr3_1:68802852-68802871 Msa0370860:CDS 40.0%
CCTAGTTTCATCATCATGAG+AGG + chr3_1:68802924-68802943 None:intergenic 40.0%
! CCTCTCATGATGATGAAACT+AGG - chr3_1:68802921-68802940 Msa0370860:CDS 40.0%
ACTGATGAAACAACAATGGC+TGG + chr3_1:68802954-68802973 None:intergenic 40.0%
ATGATATTTGCAGCCGTGTT+CGG + chr3_1:68803032-68803051 None:intergenic 40.0%
TATGATACACCAGATGGTAG+TGG - chr3_1:68803326-68803345 Msa0370860:intron 40.0%
CAATTAGCAGCTTTCAGTGT+TGG - chr3_1:68803383-68803402 Msa0370860:intron 40.0%
ATGTCAATCCAACCCAATGA+AGG + chr3_1:68803419-68803438 None:intergenic 40.0%
GGTTGGATTGACATTCTTAC+TGG - chr3_1:68803425-68803444 Msa0370860:intron 40.0%
AAGAGGATGAAGAAGAGTGA+AGG - chr3_1:68803518-68803537 Msa0370860:intron 40.0%
CCACAAAGTCCTTATCTGAT+TGG + chr3_1:68803547-68803566 None:intergenic 40.0%
CCAATCAGATAAGGACTTTG+TGG - chr3_1:68803544-68803563 Msa0370860:intron 40.0%
! AGAGGAAGAAGCATACCATT+AGG + chr3_1:68803640-68803659 None:intergenic 40.0%
CGATTCTGTGAAGTGGAATT+AGG + chr3_1:68803733-68803752 None:intergenic 40.0%
! TACAAACCGATTCTGTGAAG+TGG + chr3_1:68803740-68803759 None:intergenic 40.0%
CAATTTCAGGACATGTTTGC+TGG - chr3_1:68804141-68804160 Msa0370860:CDS 40.0%
!! CAAGAGTGTTTGTGAATGCA+TGG - chr3_1:68804427-68804446 Msa0370860:CDS 40.0%
TGAATGCATGGTCAATTCAG+AGG - chr3_1:68804439-68804458 Msa0370860:CDS 40.0%
GAATGCATGGTCAATTCAGA+GGG - chr3_1:68804440-68804459 Msa0370860:CDS 40.0%
! TTCAGAGGGATCCTGAATTT+TGG - chr3_1:68804454-68804473 Msa0370860:CDS 40.0%
!! TCTGGCTTGTTCCAAAATTC+AGG + chr3_1:68804468-68804487 None:intergenic 40.0%
CTTTCAGGAATGAACTCATC+TGG + chr3_1:68804486-68804505 None:intergenic 40.0%
!! CAATACATTCCATTTGGTGC+TGG - chr3_1:68804549-68804568 Msa0370860:CDS 40.0%
GGATGTCCTGGAATTTCATT+TGG - chr3_1:68804579-68804598 Msa0370860:CDS 40.0%
CCAAGTCCAAATGAAATTCC+AGG + chr3_1:68804588-68804607 None:intergenic 40.0%
CCTGGAATTTCATTTGGACT+TGG - chr3_1:68804585-68804604 Msa0370860:CDS 40.0%
TGCATATGTGCACCAATCTT+AGG + chr3_1:68804663-68804682 None:intergenic 40.0%
AGTGTAGGTTCAAGATGAAG+TGG + chr3_1:68804735-68804754 None:intergenic 40.0%
GAACCTACACTACACTCATT+TGG - chr3_1:68804744-68804763 Msa0370860:CDS 40.0%
GATCCAAATGAGTGTAGTGT+AGG + chr3_1:68804750-68804769 None:intergenic 40.0%
!! CCAATTATTGGTAGCTTTGG+TGG + chr3_1:68802837-68802856 None:intergenic 40.0%
CCACCAAAGCTACCAATAAT+TGG - chr3_1:68802834-68802853 Msa0370860:CDS 40.0%
ATTGGCAATCTTCACCAACT+TGG - chr3_1:68802852-68802871 Msa0370860:CDS 40.0%
CCTAGTTTCATCATCATGAG+AGG + chr3_1:68802924-68802943 None:intergenic 40.0%
! CCTCTCATGATGATGAAACT+AGG - chr3_1:68802921-68802940 Msa0370860:CDS 40.0%
ACTGATGAAACAACAATGGC+TGG + chr3_1:68802954-68802973 None:intergenic 40.0%
ATGATATTTGCAGCCGTGTT+CGG + chr3_1:68803032-68803051 None:intergenic 40.0%
TATGATACACCAGATGGTAG+TGG - chr3_1:68803326-68803345 Msa0370860:intron 40.0%
CAATTAGCAGCTTTCAGTGT+TGG - chr3_1:68803383-68803402 Msa0370860:intron 40.0%
ATGTCAATCCAACCCAATGA+AGG + chr3_1:68803419-68803438 None:intergenic 40.0%
GGTTGGATTGACATTCTTAC+TGG - chr3_1:68803425-68803444 Msa0370860:intron 40.0%
AAGAGGATGAAGAAGAGTGA+AGG - chr3_1:68803518-68803537 Msa0370860:intron 40.0%
CCACAAAGTCCTTATCTGAT+TGG + chr3_1:68803547-68803566 None:intergenic 40.0%
CCAATCAGATAAGGACTTTG+TGG - chr3_1:68803544-68803563 Msa0370860:intron 40.0%
! AGAGGAAGAAGCATACCATT+AGG + chr3_1:68803640-68803659 None:intergenic 40.0%
CGATTCTGTGAAGTGGAATT+AGG + chr3_1:68803733-68803752 None:intergenic 40.0%
! TACAAACCGATTCTGTGAAG+TGG + chr3_1:68803740-68803759 None:intergenic 40.0%
CAATTTCAGGACATGTTTGC+TGG - chr3_1:68804141-68804160 Msa0370860:CDS 40.0%
!! CAAGAGTGTTTGTGAATGCA+TGG - chr3_1:68804427-68804446 Msa0370860:CDS 40.0%
TGAATGCATGGTCAATTCAG+AGG - chr3_1:68804439-68804458 Msa0370860:CDS 40.0%
GAATGCATGGTCAATTCAGA+GGG - chr3_1:68804440-68804459 Msa0370860:CDS 40.0%
! TTCAGAGGGATCCTGAATTT+TGG - chr3_1:68804454-68804473 Msa0370860:CDS 40.0%
!! TCTGGCTTGTTCCAAAATTC+AGG + chr3_1:68804468-68804487 None:intergenic 40.0%
CTTTCAGGAATGAACTCATC+TGG + chr3_1:68804486-68804505 None:intergenic 40.0%
!! CAATACATTCCATTTGGTGC+TGG - chr3_1:68804549-68804568 Msa0370860:CDS 40.0%
GGATGTCCTGGAATTTCATT+TGG - chr3_1:68804579-68804598 Msa0370860:CDS 40.0%
CCAAGTCCAAATGAAATTCC+AGG + chr3_1:68804588-68804607 None:intergenic 40.0%
CCTGGAATTTCATTTGGACT+TGG - chr3_1:68804585-68804604 Msa0370860:CDS 40.0%
TGCATATGTGCACCAATCTT+AGG + chr3_1:68804663-68804682 None:intergenic 40.0%
AGTGTAGGTTCAAGATGAAG+TGG + chr3_1:68804735-68804754 None:intergenic 40.0%
GAACCTACACTACACTCATT+TGG - chr3_1:68804744-68804763 Msa0370860:CDS 40.0%
GATCCAAATGAGTGTAGTGT+AGG + chr3_1:68804750-68804769 None:intergenic 40.0%
!! ATTGGTAGCTTTGGTGGTGA+AGG + chr3_1:68802831-68802850 None:intergenic 45.0%
! TAGAGAGTGCATGGAAGGAT+TGG + chr3_1:68802890-68802909 None:intergenic 45.0%
TGTCTCCACTCTTCTCCATA+GGG + chr3_1:68803086-68803105 None:intergenic 45.0%
!! AGTGGTAGCTTTGGAGAGTT+AGG - chr3_1:68803344-68803363 Msa0370860:intron 45.0%
!! GTAGCTTTGGAGAGTTAGGA+AGG - chr3_1:68803348-68803367 Msa0370860:intron 45.0%
AGGTGATTGCAGATCACAAG+AGG - chr3_1:68803501-68803520 Msa0370860:intron 45.0%
AGGATGAAGAAGAGTGAAGG+TGG - chr3_1:68803521-68803540 Msa0370860:intron 45.0%
TGAAGGTGGCCAATCAGATA+AGG - chr3_1:68803535-68803554 Msa0370860:intron 45.0%
! TTTCAGGACATGTTTGCTGG+AGG - chr3_1:68804144-68804163 Msa0370860:CDS 45.0%
CTTCTTCAACACTTCTCGAG+TGG - chr3_1:68804175-68804194 Msa0370860:CDS 45.0%
! GGACATTTGCTGAACTCATG+AGG - chr3_1:68804196-68804215 Msa0370860:CDS 45.0%
CTAGGTATCAAAAGAGGAGC+AGG + chr3_1:68804357-68804376 None:intergenic 45.0%
!! ATTGGTAGCTTTGGTGGTGA+AGG + chr3_1:68802831-68802850 None:intergenic 45.0%
! TAGAGAGTGCATGGAAGGAT+TGG + chr3_1:68802890-68802909 None:intergenic 45.0%
TGTCTCCACTCTTCTCCATA+GGG + chr3_1:68803086-68803105 None:intergenic 45.0%
!! AGTGGTAGCTTTGGAGAGTT+AGG - chr3_1:68803344-68803363 Msa0370860:intron 45.0%
!! GTAGCTTTGGAGAGTTAGGA+AGG - chr3_1:68803348-68803367 Msa0370860:intron 45.0%
AGGTGATTGCAGATCACAAG+AGG - chr3_1:68803501-68803520 Msa0370860:intron 45.0%
AGGATGAAGAAGAGTGAAGG+TGG - chr3_1:68803521-68803540 Msa0370860:intron 45.0%
TGAAGGTGGCCAATCAGATA+AGG - chr3_1:68803535-68803554 Msa0370860:intron 45.0%
! TTTCAGGACATGTTTGCTGG+AGG - chr3_1:68804144-68804163 Msa0370860:CDS 45.0%
CTTCTTCAACACTTCTCGAG+TGG - chr3_1:68804175-68804194 Msa0370860:CDS 45.0%
! GGACATTTGCTGAACTCATG+AGG - chr3_1:68804196-68804215 Msa0370860:CDS 45.0%
CTAGGTATCAAAAGAGGAGC+AGG + chr3_1:68804357-68804376 None:intergenic 45.0%
! AGTGCATGGAAGGATTGGTG+TGG + chr3_1:68802885-68802904 None:intergenic 50.0%
ATATTTGCAGCCGTGTTCGG+AGG + chr3_1:68803029-68803048 None:intergenic 50.0%
TAGCACCCTATGGAGAAGAG+TGG - chr3_1:68803078-68803097 Msa0370860:CDS 50.0%
CTGTCTCCACTCTTCTCCAT+AGG + chr3_1:68803087-68803106 None:intergenic 50.0%
GAGAAGAGTGGAGACAGAGA+AGG - chr3_1:68803090-68803109 Msa0370860:CDS 50.0%
CCAAAGCTACCACTACCATC+TGG + chr3_1:68803338-68803357 None:intergenic 50.0%
!! CCAGATGGTAGTGGTAGCTT+TGG - chr3_1:68803335-68803354 Msa0370860:intron 50.0%
GTGCGCGACTATGTCTAGTT+TGG + chr3_1:68804081-68804100 None:intergenic 50.0%
GGTATCAAAAGAGGAGCAGG+TGG + chr3_1:68804354-68804373 None:intergenic 50.0%
GACTGGAAGCTGCCTAAGAT+TGG - chr3_1:68804648-68804667 Msa0370860:CDS 50.0%
! AGTGCATGGAAGGATTGGTG+TGG + chr3_1:68802885-68802904 None:intergenic 50.0%
ATATTTGCAGCCGTGTTCGG+AGG + chr3_1:68803029-68803048 None:intergenic 50.0%
TAGCACCCTATGGAGAAGAG+TGG - chr3_1:68803078-68803097 Msa0370860:CDS 50.0%
CTGTCTCCACTCTTCTCCAT+AGG + chr3_1:68803087-68803106 None:intergenic 50.0%
GAGAAGAGTGGAGACAGAGA+AGG - chr3_1:68803090-68803109 Msa0370860:CDS 50.0%
CCAAAGCTACCACTACCATC+TGG + chr3_1:68803338-68803357 None:intergenic 50.0%
!! CCAGATGGTAGTGGTAGCTT+TGG - chr3_1:68803335-68803354 Msa0370860:intron 50.0%
GTGCGCGACTATGTCTAGTT+TGG + chr3_1:68804081-68804100 None:intergenic 50.0%
GGTATCAAAAGAGGAGCAGG+TGG + chr3_1:68804354-68804373 None:intergenic 50.0%
GACTGGAAGCTGCCTAAGAT+TGG - chr3_1:68804648-68804667 Msa0370860:CDS 50.0%
!! GGTAGCTTTGGTGGTGAAGG+AGG + chr3_1:68802828-68802847 None:intergenic 55.0%
! GGTGTGGTAGTGTGCCAAGT+TGG + chr3_1:68802869-68802888 None:intergenic 55.0%
CTCCAACAAGCCTCCGAACA+CGG - chr3_1:68803016-68803035 Msa0370860:CDS 55.0%
! GACGTCGCTTTAGCACCCTA+TGG - chr3_1:68803068-68803087 Msa0370860:CDS 55.0%
! CAGGACATGTTTGCTGGAGG+AGG - chr3_1:68804147-68804166 Msa0370860:CDS 55.0%
CCTCTTCTCCCAGCACCAAA+TGG + chr3_1:68804561-68804580 None:intergenic 55.0%
!! CCATTTGGTGCTGGGAGAAG+AGG - chr3_1:68804558-68804577 Msa0370860:CDS 55.0%
!! GGTAGCTTTGGTGGTGAAGG+AGG + chr3_1:68802828-68802847 None:intergenic 55.0%
! GGTGTGGTAGTGTGCCAAGT+TGG + chr3_1:68802869-68802888 None:intergenic 55.0%
CTCCAACAAGCCTCCGAACA+CGG - chr3_1:68803016-68803035 Msa0370860:CDS 55.0%
! GACGTCGCTTTAGCACCCTA+TGG - chr3_1:68803068-68803087 Msa0370860:CDS 55.0%
! CAGGACATGTTTGCTGGAGG+AGG - chr3_1:68804147-68804166 Msa0370860:CDS 55.0%
CCTCTTCTCCCAGCACCAAA+TGG + chr3_1:68804561-68804580 None:intergenic 55.0%
!! CCATTTGGTGCTGGGAGAAG+AGG - chr3_1:68804558-68804577 Msa0370860:CDS 55.0%
AGCCGTGTTCGGAGGCTTGT+TGG + chr3_1:68803021-68803040 None:intergenic 60.0%
GCTGGGAGAAGAGGATGTCC+TGG - chr3_1:68804567-68804586 Msa0370860:CDS 60.0%
AGCCGTGTTCGGAGGCTTGT+TGG + chr3_1:68803021-68803040 None:intergenic 60.0%
GCTGGGAGAAGAGGATGTCC+TGG - chr3_1:68804567-68804586 Msa0370860:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 68802690 68804794 68802690 ID=Msa0370860;Name=Msa0370860
chr3_1 mRNA 68802690 68804794 68802690 ID=Msa0370860-mRNA-1;Parent=Msa0370860;Name=Msa0370860-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|1|1|2|0|532
chr3_1 exon 68803841 68804794 68803841 ID=Msa0370860-mRNA-1:exon:14576;Parent=Msa0370860-mRNA-1
chr3_1 exon 68802690 68803334 68802690 ID=Msa0370860-mRNA-1:exon:14575;Parent=Msa0370860-mRNA-1
chr3_1 CDS 68803841 68804794 68803841 ID=Msa0370860-mRNA-1:cds;Parent=Msa0370860-mRNA-1
chr3_1 CDS 68802690 68803334 68802690 ID=Msa0370860-mRNA-1:cds;Parent=Msa0370860-mRNA-1
Gene Sequence

>Msa0370860

ATGGCTTTTCTGCAGCCACTAGCTCTAAAGCAAATGTTGTATGAGAAAATTTCAACACAATACTTAACCATTATCTTTTGCTTCACTAGCCTTGTGTTTGTGCTTAAACTGATAAGAAGAAATAAACTGAATTTGCCTCCTTCACCACCAAAGCTACCAATAATTGGCAATCTTCACCAACTTGGCACACTACCACACCAATCCTTCCATGCACTCTCTAAAAAATATGGCCCTCTCATGATGATGAAACTAGGTCAAACTCCAGCCATTGTTGTTTCATCAGTAGAAGTGGCCAAAGAAATATTCAAAAACCATGATGTTGTTTTCTCCAACAAGCCTCCGAACACGGCTGCAAATATCATTCTCTATGGATGCACAGACGTCGCTTTAGCACCCTATGGAGAAGAGTGGAGACAGAGAAGGAAGATTTGTGTTGTTGAACTTCTGAGCATGAAAAGAGTGCAATCTTTTCAGTCCATAAGAGAAGAAGAAGTAGCAGAGATTGTTGATACTTTAAAGGAAGCATGTGCAAGTGCAAGTGCAAGTGCAAGTAAAGAGTCTTCTATAGTGAATCTGAGTGAGATGCTGATTTCAGCCTCAAATAACATAGTTTCAAGGTGTGTTCTTGGACAAAAGTATGATACACCAGATGGTAGTGGTAGCTTTGGAGAGTTAGGAAGGAAGATGATGAAACAATTAGCAGCTTTCAGTGTTGGAGATCTTTTTCCTTCATTGGGTTGGATTGACATTCTTACTGGCCAAATATCTGAATTTAAGGCCACTTTCTGTGCATTAGATTCTTTCTTTGATCAGGTGATTGCAGATCACAAGAGGATGAAGAAGAGTGAAGGTGGCCAATCAGATAAGGACTTTGTGGAGATTCTACTTCAAGTTCAAGATGGTGCAAAGTATGATTTTCCACTCACAAATGATAACATCAAAGCAATCCTAATGGACATGTTTGCTGGAGGAGGTGATACTTCTTCAACACTTCTCGAGTGGACATTTGCTGAACTCATGAGGCATAAAAACATCATGAAGAAAGTCCAAGAAGAAATAAGAAAAGTTGTTGGGTATAAATCAAAAGTGGATGAAAATGATCTGAATCAAATGAACTACTTGAAGTGTGTAGTCAAAGAAACTATGAGATTACATCCACCTGCTCCTCTTTTGATACCTAGAGAAACTTTATCTGATGTGAGAGTTACAGGGTTTGATATTCCATCAAAAACAAGAGTGTTTGTGAATGCATGGTCAATTCAGAGGGATCCTGAATTTTGGAACAAGCCAGATGAGTTCATTCCTGAAAGATTTGAAGAACAACCAGAAATTGATTTTAAAGGACAAGATTTGCAATACATTCCATTTGGTGCTGGGAGAAGAGGATGTCCTGGAATTTCATTTGGACTTGGTTCTACTGAGCTTTTGCTTGCTAATCTTCTCTATTGGTTTGACTGGAAGCTGCCTAAGATTGGTGCACATATGCAAGATATAGACATGAGTGAGATTCATGGGCTCACTGTTAGCAAGAAAGTACCACTTCATCTTGAACCTACACTACACTCATTTGGATCTCAACGACCATTACCTATCATGTGA
Protein sequence

>Msa0370860

MAFLQPLALKQMLYEKISTQYLTIIFCFTSLVFVLKLIRRNKLNLPPSPPKLPIIGNLHQLGTLPHQSFHALSKKYGPLMMMKLGQTPAIVVSSVEVAKEIFKNHDVVFSNKPPNTAANIILYGCTDVALAPYGEEWRQRRKICVVELLSMKRVQSFQSIREEEVAEIVDTLKEACASASASASKESSIVNLSEMLISASNNIVSRCVLGQKYDTPDGSGSFGELGRKMMKQLAAFSVGDLFPSLGWIDILTGQISEFKATFCALDSFFDQVIADHKRMKKSEGGQSDKDFVEILLQVQDGAKYDFPLTNDNIKAILMDMFAGGGDTSSTLLEWTFAELMRHKNIMKKVQEEIRKVVGYKSKVDENDLNQMNYLKCVVKETMRLHPPAPLLIPRETLSDVRVTGFDIPSKTRVFVNAWSIQRDPEFWNKPDEFIPERFEEQPEIDFKGQDLQYIPFGAGRRGCPGISFGLGSTELLLANLLYWFDWKLPKIGAHMQDIDMSEIHGLTVSKKVPLHLEPTLHSFGSQRPLPIM*