AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069890 MtrunA17_Chr7g0252031 98.671 301 3 1 1 300 1 301 0.0 600
Msa1069890 MtrunA17_Chr7g0268591 56.884 276 118 1 23 298 22 296 2.23e-112 327
Msa1069890 MtrunA17_Chr7g0244061 49.265 272 125 4 32 290 27 298 1.24e-82 251
Msa1069890 MtrunA17_Chr4g0025971 50.373 268 122 5 32 298 12 269 1.96e-77 237
Msa1069890 MtrunA17_Chr4g0026001 51.953 256 113 5 32 286 12 258 2.14e-77 237
Msa1069890 MtrunA17_Chr4g0044111 50.190 263 123 5 32 293 11 266 1.02e-71 222
Msa1069890 MtrunA17_Chr7g0266981 50.190 263 123 5 32 293 11 266 1.03e-71 222
Msa1069890 MtrunA17_Chr4g0025981 49.231 260 121 6 35 293 42 291 7.69e-71 222
Msa1069890 MtrunA17_Chr7g0270451 47.388 268 132 4 32 297 4 264 2.48e-70 218
Msa1069890 MtrunA17_Chr4g0044131 44.318 264 140 3 31 293 5 262 8.34e-70 217
Msa1069890 MtrunA17_Chr7g0270441 45.594 261 134 4 32 290 4 258 7.70e-69 214
Msa1069890 MtrunA17_Chr7g0266891 49.425 261 124 5 34 293 7 260 3.39e-68 213
Msa1069890 MtrunA17_Chr4g0040371 45.956 272 136 7 32 296 17 284 9.05e-68 213
Msa1069890 MtrunA17_Chr2g0324021 45.113 266 136 7 32 295 4 261 1.71e-67 211
Msa1069890 MtrunA17_Chr3g0084871 46.970 264 124 4 32 286 14 270 3.83e-66 208
Msa1069890 MtrunA17_Chr6g0459261 41.797 256 140 5 33 285 24 273 9.60e-60 192
Msa1069890 MtrunA17_Chr6g0459301 41.016 256 142 5 33 285 13 262 2.68e-59 190
Msa1069890 MtrunA17_Chr7g0267001 39.773 264 134 3 31 293 5 244 3.00e-58 187
Msa1069890 MtrunA17_Chr6g0459281 40.076 262 148 5 27 285 6 261 4.87e-56 182
Msa1069890 MtrunA17_Chr6g0459351 40.310 258 141 6 33 285 12 261 8.97e-56 181
Msa1069890 MtrunA17_Chr7g0267011 49.474 190 94 2 31 219 5 193 2.09e-54 175
Msa1069890 MtrunA17_Chr6g0459331 40.000 260 145 6 33 288 12 264 3.49e-53 174
Msa1069890 MtrunA17_Chr6g0459271 39.453 256 146 5 33 285 12 261 6.98e-52 171
Msa1069890 MtrunA17_Chr7g0266991 43.830 235 110 5 32 266 23 235 8.99e-45 152
Msa1069890 MtrunA17_Chr3g0142651 54.135 133 60 1 114 246 1 132 1.04e-43 145
Msa1069890 MtrunA17_Chr6g0463951 46.067 178 88 4 114 290 1 171 1.77e-40 139
Msa1069890 MtrunA17_Chr4g0044121 46.667 180 89 4 114 293 1 173 7.11e-38 132
Msa1069890 MtrunA17_Chr7g0270471 46.053 152 76 3 141 291 1 147 1.59e-34 122
Msa1069890 MtrunA17_Chr3g0122901 31.274 259 160 6 32 285 73 318 1.50e-27 108
Msa1069890 MtrunA17_Chr7g0270461 50.980 102 49 1 23 123 35 136 3.08e-26 100
Msa1069890 MtrunA17_Chr4g0075531 29.730 259 166 6 32 287 5 250 5.24e-24 98.2
Msa1069890 MtrunA17_Chr3g0112151 29.577 284 179 9 7 286 65 331 3.82e-23 97.4
Msa1069890 MtrunA17_Chr3g0112171 30.739 257 163 7 34 286 15 260 4.27e-22 93.2
Msa1069890 MtrunA17_Chr3g0112141 30.233 258 165 7 34 287 17 263 5.43e-22 93.2
Msa1069890 MtrunA17_Chr3g0112261 30.943 265 162 8 30 286 13 264 4.59e-21 90.5
Msa1069890 MtrunA17_Chr7g0259521 28.839 267 169 8 34 291 6 260 1.21e-20 89.0
Msa1069890 MtrunA17_Chr7g0259531 29.963 267 154 10 34 285 11 259 1.40e-20 89.0
Msa1069890 MtrunA17_Chr4g0028911 29.389 262 167 7 34 286 11 263 1.90e-20 89.0
Msa1069890 MtrunA17_Chr1g0191751 28.897 263 163 7 33 284 100 349 5.15e-20 89.0
Msa1069890 MtrunA17_Chr4g0074511 29.545 264 161 10 33 284 39 289 1.37e-19 86.7
Msa1069890 MtrunA17_Chr4g0028921 29.278 263 166 8 34 286 11 263 1.58e-19 86.3
Msa1069890 MtrunA17_Chr7g0272961 28.897 263 163 7 33 284 39 288 3.39e-19 85.9
Msa1069890 MtrunA17_Chr1g0171831 27.308 260 166 7 32 277 12 262 1.22e-18 83.6
Msa1069890 MtrunA17_Chr7g0239511 30.739 257 167 6 34 286 16 265 1.68e-17 80.5
Msa1069890 MtrunA17_Chr4g0054341 30.366 191 125 3 35 222 3 188 4.54e-17 79.7
Msa1069890 MtrunA17_Chr1g0182511 28.626 262 165 8 34 285 14 263 8.98e-17 78.6
Msa1069890 MtrunA17_Chr7g0239491 28.897 263 165 8 34 287 15 264 5.25e-16 76.3
Msa1069890 MtrunA17_Chr7g0239481 29.070 258 168 6 34 285 15 263 8.04e-16 75.9
Msa1069890 MtrunA17_Chr3g0112271 27.626 257 171 7 34 286 17 262 1.99e-15 74.7
Msa1069890 MtrunA17_Chr8g0357481 28.947 266 161 11 34 285 14 265 1.24e-14 72.8
Msa1069890 MtrunA17_Chr7g0239501 27.413 259 173 6 34 286 16 265 1.43e-14 72.4
Msa1069890 MtrunA17_Chr4g0033091 31.651 218 119 8 31 226 21 230 4.42e-13 67.8
Msa1069890 MtrunA17_Chr7g0239451 27.907 258 175 7 34 287 16 266 3.36e-12 65.5
Msa1069890 MtrunA17_Chr7g0249571 26.804 194 133 4 34 220 38 229 6.53e-12 65.1
Msa1069890 MtrunA17_Chr4g0032181 27.317 205 125 4 89 286 59 246 5.45e-11 61.6
Msa1069890 MtrunA17_Chr4g0076931 30.047 213 131 7 29 226 1 210 5.95e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069890 AT3G26760.1 59.197 299 118 2 1 295 1 299 1.15e-124 358
Msa1069890 AT3G26770.1 59.551 267 108 0 32 298 39 305 3.01e-118 342
Msa1069890 AT4G03140.1 55.224 268 119 1 32 299 76 342 9.92e-103 304
Msa1069890 AT3G51680.1 48.889 270 127 5 32 290 30 299 2.55e-77 238
Msa1069890 AT2G47120.1 45.725 269 131 6 31 297 3 258 5.46e-70 218
Msa1069890 AT2G47120.2 45.693 267 130 6 33 297 6 259 1.18e-69 217
Msa1069890 AT3G29250.3 42.456 285 155 5 7 289 15 292 1.95e-68 215
Msa1069890 AT2G47130.1 45.211 261 133 4 31 289 3 255 2.99e-68 213
Msa1069890 AT3G29260.1 44.828 261 134 4 31 289 3 255 1.23e-67 212
Msa1069890 AT2G47140.1 44.444 261 136 5 31 289 3 256 2.78e-67 211
Msa1069890 AT3G29250.2 44.828 261 135 5 31 289 3 256 2.01e-66 209
Msa1069890 AT3G29250.1 42.160 287 155 6 7 289 15 294 2.27e-66 210
Msa1069890 AT1G52340.1 43.071 267 133 4 32 286 16 275 1.75e-59 192
Msa1069890 AT3G42960.1 47.510 261 128 6 32 287 6 262 2.74e-59 191
Msa1069890 AT2G47150.1 31.128 257 117 7 34 289 1 198 2.96e-26 103
Msa1069890 AT5G18210.1 31.439 264 157 9 34 285 8 259 8.39e-26 103
Msa1069890 AT1G63380.4 30.075 266 161 8 34 286 19 272 2.81e-24 99.8
Msa1069890 AT1G63380.3 30.075 266 161 8 34 286 15 268 3.05e-24 99.8
Msa1069890 AT1G63380.2 30.075 266 161 8 34 286 22 275 3.60e-24 99.8
Msa1069890 AT1G63380.1 30.075 266 161 8 34 286 17 270 3.76e-24 99.4
Msa1069890 AT2G17845.1 29.658 263 164 6 34 284 47 300 3.34e-23 97.4
Msa1069890 AT1G62610.2 29.434 265 164 7 34 286 13 266 4.00e-23 96.7
Msa1069890 AT1G62610.1 29.434 265 164 7 34 286 14 267 4.55e-23 96.3
Msa1069890 AT1G62610.3 29.434 265 164 7 34 286 15 268 4.58e-23 96.3
Msa1069890 AT1G62610.4 29.434 265 164 7 34 286 19 272 4.91e-23 96.3
Msa1069890 AT3G55290.1 30.534 262 164 6 34 286 18 270 3.31e-22 94.4
Msa1069890 AT4G13180.1 30.268 261 161 9 34 285 13 261 3.33e-22 94.0
Msa1069890 AT3G55290.2 30.534 262 164 6 34 286 17 269 3.49e-22 94.0
Msa1069890 AT2G29150.1 31.818 264 163 11 34 293 16 266 4.80e-22 93.6
Msa1069890 AT1G24360.1 28.669 293 184 10 1 285 42 317 9.16e-22 93.6
Msa1069890 AT5G18210.2 31.452 248 146 9 34 269 8 243 2.59e-21 91.7
Msa1069890 AT3G03980.1 29.851 268 160 8 34 285 14 269 2.70e-21 91.7
Msa1069890 AT2G29340.2 28.788 264 172 7 34 293 7 258 1.17e-20 89.7
Msa1069890 AT2G29370.1 28.302 265 174 8 34 294 16 268 1.73e-20 89.4
Msa1069890 AT2G29340.1 28.788 264 172 7 34 293 7 258 2.01e-20 89.7
Msa1069890 AT5G06060.1 27.407 270 168 9 34 293 9 260 9.47e-20 87.0
Msa1069890 AT4G05530.1 31.439 264 155 10 32 287 7 252 2.61e-19 85.9
Msa1069890 AT3G04000.1 29.478 268 160 8 34 284 14 269 3.28e-19 85.9
Msa1069890 AT2G29300.1 27.652 264 163 8 34 286 7 253 3.48e-19 85.5
Msa1069890 AT2G29310.1 27.444 266 173 7 34 293 7 258 4.23e-19 85.1
Msa1069890 AT2G29300.2 27.652 264 163 8 34 286 7 253 6.98e-19 85.1
Msa1069890 AT2G29360.1 27.985 268 176 9 34 296 16 271 7.05e-19 84.7
Msa1069890 AT3G55310.1 29.588 267 160 8 34 286 17 269 1.20e-18 84.3
Msa1069890 AT3G05260.1 26.515 264 169 6 33 285 36 285 1.63e-18 84.0
Msa1069890 AT1G54870.2 27.652 264 165 8 33 284 83 332 1.96e-18 84.7
Msa1069890 AT1G54870.1 27.652 264 165 8 33 284 81 330 2.21e-18 84.3
Msa1069890 AT3G46170.1 28.897 263 169 6 33 286 25 278 3.66e-18 83.2
Msa1069890 AT2G29340.3 30.412 194 128 4 34 223 7 197 1.16e-17 80.1
Msa1069890 AT2G29340.4 30.412 194 128 4 34 223 7 197 1.16e-17 80.1
Msa1069890 AT2G29320.1 26.966 267 174 8 34 293 13 265 1.47e-17 81.3
Msa1069890 AT2G29290.2 28.302 265 172 10 34 293 7 258 2.67e-17 80.1
Msa1069890 AT1G10310.1 32.673 202 120 6 37 226 18 215 4.48e-17 79.3
Msa1069890 AT2G30670.1 27.273 264 176 8 34 293 7 258 1.38e-16 78.2
Msa1069890 AT2G29330.1 26.692 266 175 7 34 293 7 258 6.34e-16 76.3
Msa1069890 AT1G07440.1 25.758 264 179 7 34 293 12 262 1.80e-15 75.1
Msa1069890 AT2G29350.1 27.444 266 176 9 34 295 15 267 2.25e-15 75.1
Msa1069890 AT2G29260.1 28.996 269 172 10 34 297 68 322 2.74e-15 75.5
Msa1069890 AT2G29310.3 27.320 194 134 3 34 223 7 197 1.84e-14 71.2
Msa1069890 AT2G29320.3 27.692 195 133 4 34 223 13 204 2.91e-14 70.9
Msa1069890 AT2G29350.2 29.208 202 136 5 34 231 15 213 1.12e-13 69.3
Msa1069890 AT3G12800.1 28.364 275 170 10 34 294 10 271 6.78e-13 68.2
Msa1069890 AT1G49670.2 28.270 237 131 8 39 252 9 229 1.09e-12 68.9
Msa1069890 AT1G49670.1 28.270 237 131 8 39 252 9 229 1.27e-12 68.6
Msa1069890 AT2G29290.1 27.309 249 163 10 50 293 6 241 1.89e-12 66.2
Msa1069890 AT2G29310.2 26.033 242 160 6 51 286 22 250 1.93e-12 66.6
Msa1069890 AT5G65205.1 28.293 205 137 4 29 230 1 198 1.05e-11 64.7
Msa1069890 AT3G01980.1 24.324 259 177 6 36 284 5 254 1.43e-11 63.9
Msa1069890 AT3G01980.4 24.324 259 177 6 36 284 5 254 1.43e-11 63.9
Msa1069890 AT3G03330.1 25.888 197 132 4 34 220 41 233 1.54e-11 64.7
Msa1069890 AT5G10050.1 27.000 200 134 5 35 230 6 197 5.43e-11 62.4
Msa1069890 AT2G29320.2 25.200 250 166 8 51 293 12 247 6.58e-11 62.0

Find 108 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAATTCCTTTGCAACTTT+TGG 0.096535 7_2:-65730507 None:intergenic
GATGGGTTGATGAGTATTTA+AGG 0.193959 7_2:-65727775 None:intergenic
GTTATGCTTGGTGGGATTAT+TGG 0.256279 7_2:-65730654 None:intergenic
AGAAGAGTGTTGACCTTTGA+TGG 0.268825 7_2:-65727831 None:intergenic
CCAATGTCATTGTATCAAAT+TGG 0.270336 7_2:+65731139 Msa1069890:CDS
AGTGGGCTATTTGGTGGGCT+TGG 0.274352 7_2:+65730998 Msa1069890:CDS
GCCAAAAGTTGCAAAGGAAT+TGG 0.277997 7_2:+65730506 Msa1069890:CDS
CGTTGTCGGCGATGATTACT+TGG 0.280742 7_2:-65730470 None:intergenic
GTGGGCTATTTGGTGGGCTT+GGG 0.302403 7_2:+65730999 Msa1069890:CDS
TCAAGCATAAGTGGGCTATT+TGG 0.324040 7_2:+65730989 Msa1069890:CDS
AGTTCACTGCTTCTTCTACT+TGG 0.342962 7_2:-65730572 None:intergenic
TATGCTTGATGTACATATAA+TGG 0.345255 7_2:-65730975 None:intergenic
CAAATTGGAAAGTTTATTCC+TGG 0.346532 7_2:+65731154 Msa1069890:CDS
TACAACAATGCTGGCATAAC+AGG 0.355905 7_2:+65730630 Msa1069890:CDS
AACTTTGCCATAACAAACTA+TGG 0.360430 7_2:+65730591 Msa1069890:CDS
AAATTTCGCGTTTCCTTCTC+CGG 0.363396 7_2:+65731345 Msa1069890:CDS
TAGTTTACCATAGTTTGTTA+TGG 0.381695 7_2:-65730598 None:intergenic
CCCACCAAGCATAACAGAAT+TGG 0.384770 7_2:+65730662 Msa1069890:CDS
GTCATGAGAATCAATGTAAC+AGG 0.385275 7_2:+65730705 Msa1069890:CDS
CCCCATGTTGGACAAATTCA+TGG 0.396340 7_2:-65730446 None:intergenic
GTTCACTGCTTCTTCTACTT+GGG 0.400670 7_2:-65730571 None:intergenic
GTTAGCTAGGGTTTAAATTC+CGG 0.402050 7_2:+65731377 Msa1069890:exon
CCAAAAGTTGCAAAGGAATT+GGG 0.408007 7_2:+65730507 Msa1069890:CDS
CACCAACTTCAGCAATGGTT+TGG 0.409202 7_2:+65728077 Msa1069890:CDS
GTGATCAAGATCTGATTGTA+AGG 0.414105 7_2:-65727860 None:intergenic
ACCTTTGATGGATCTAGCTC+TGG 0.424045 7_2:-65727819 None:intergenic
TGCTAGAGCTGCATTGTACT+TGG 0.426496 7_2:+65731255 Msa1069890:CDS
GCCGACAACGACACTAAACT+TGG 0.431149 7_2:+65730483 Msa1069890:CDS
GTAGACTTTGATATTGTGTA+TGG 0.435479 7_2:-65731028 None:intergenic
TCCAATTCTGTTATGCTTGG+TGG 0.440019 7_2:-65730663 None:intergenic
GGTCAGAATCTCATAGTTGA+TGG 0.441728 7_2:+65731304 Msa1069890:CDS
CCCAAGTTTAGTGTCGTTGT+CGG 0.443828 7_2:-65730484 None:intergenic
ACTGGATCAGCAAGTGGACT+TGG 0.446502 7_2:+65730411 Msa1069890:CDS
CCAATTCTGTTATGCTTGGT+GGG 0.447299 7_2:-65730662 None:intergenic
AACCAAACCATTGCTGAAGT+TGG 0.452789 7_2:-65728079 None:intergenic
CCGGATCAAATCGGTTAGCT+AGG 0.459950 7_2:+65731364 Msa1069890:exon
GTGATGATACCAAAGGGCTA+TGG 0.461101 7_2:+65730950 Msa1069890:CDS
ACACGAAATTATTCTCTTAG+TGG 0.462248 7_2:-65727708 None:intergenic
GCTAGTGAACTATGTGGAGC+TGG 0.466528 7_2:+65731076 Msa1069890:CDS
ATTTGAAAGAAAAGAAATGA+TGG 0.466642 7_2:-65727793 None:intergenic
TTTCCTTCTCCGGATCAAAT+CGG 0.468245 7_2:+65731355 Msa1069890:CDS
AATGTAACAGGAGTTATTGC+AGG 0.478783 7_2:+65730717 Msa1069890:CDS
GATGATGCTAAGTTTATCTC+AGG 0.492118 7_2:+65731283 Msa1069890:CDS
GTGTGACCCTCGAACAGATA+GGG 0.495007 7_2:+65731176 Msa1069890:CDS
CAATTTCCCCTATCTGTTCG+AGG 0.495828 7_2:-65731183 None:intergenic
CACGAAATTATTCTCTTAGT+GGG 0.497747 7_2:-65727707 None:intergenic
AGCATAAGTGGGCTATTTGG+TGG 0.499085 7_2:+65730992 Msa1069890:CDS
GCCCATGAATTTGTCCAACA+TGG 0.508068 7_2:+65730444 Msa1069890:CDS
GGTGTGACCCTCGAACAGAT+AGG 0.512517 7_2:+65731175 Msa1069890:CDS
CCAATTTGATACAATGACAT+TGG 0.512550 7_2:-65731139 None:intergenic
TAGGGTTTAAATTCCGGTTG+TGG 0.513846 7_2:+65731383 Msa1069890:three_prime_UTR
TGATTACTTGGGCCCCATGT+TGG 0.514016 7_2:-65730458 None:intergenic
ATGCAACAGTTGGTGGAAGA+AGG 0.524744 7_2:+65728121 Msa1069890:CDS
ATAATGGACCCATAGCCCTT+TGG 0.527774 7_2:-65730959 None:intergenic
CAGATAGGGGAAATTGTTAG+TGG 0.528334 7_2:+65731190 Msa1069890:CDS
CCTAGCTAACCGATTTGATC+CGG 0.532831 7_2:-65731364 None:intergenic
CCCATGAATTTGTCCAACAT+GGG 0.534289 7_2:+65730445 Msa1069890:CDS
TGATGATACCAAAGGGCTAT+GGG 0.539265 7_2:+65730951 Msa1069890:CDS
ATATGTACATCAAGCATAAG+TGG 0.539440 7_2:+65730980 Msa1069890:CDS
TGATACAATGACATTGGTGT+AGG 0.540244 7_2:-65731133 None:intergenic
AGATTCTATGCAACAGTTGG+TGG 0.542590 7_2:+65728114 Msa1069890:CDS
TCATGCTCAGAACACTAGCC+AGG 0.543355 7_2:+65727891 Msa1069890:exon
ATTCCACATACTGTGCTGAA+TGG 0.544450 7_2:-65730530 None:intergenic
AATTTCCCCTATCTGTTCGA+GGG 0.544681 7_2:-65731182 None:intergenic
TTTGATATTGTGTATGGATG+AGG 0.544687 7_2:-65731022 None:intergenic
CGGATCAAATCGGTTAGCTA+GGG 0.545809 7_2:+65731365 Msa1069890:exon
GCCACAGATTTCACCACCCC+TGG 0.546305 7_2:-65731055 None:intergenic
TTTGAAAGAAAAGAAATGAT+GGG 0.547929 7_2:-65727792 None:intergenic
GACATCATGTACAACAATGC+TGG 0.549387 7_2:+65730621 Msa1069890:CDS
ATATCAAAGTCTACAATACC+AGG 0.550206 7_2:+65731037 Msa1069890:CDS
AGGTCCAATTCTGTTATGCT+TGG 0.553618 7_2:-65730666 None:intergenic
AAGCTCACCAACTTCAGCAA+TGG 0.557570 7_2:+65728072 Msa1069890:CDS
GCATAAGTGGGCTATTTGGT+GGG 0.558522 7_2:+65730993 Msa1069890:CDS
ATCAGCAAGTGGACTTGGAA+AGG 0.560560 7_2:+65730416 Msa1069890:CDS
AATAAATGTTATTCATGTAG+TGG 0.561817 7_2:+65731415 Msa1069890:three_prime_UTR
GGGCCATTCAGCACAGTATG+TGG 0.564489 7_2:+65730527 Msa1069890:CDS
TTGTCTCTTACAAATATAGG+AGG 0.567172 7_2:-65727733 None:intergenic
GGACCTTGATGAATTTGAGA+AGG 0.567216 7_2:+65730683 Msa1069890:CDS
ATCTGTTCGAGGGTCACACC+AGG 0.568597 7_2:-65731172 None:intergenic
AGCAGATTCTATGCAACAGT+TGG 0.569130 7_2:+65728111 Msa1069890:CDS
CCCATGTTGGACAAATTCAT+GGG 0.569913 7_2:-65730445 None:intergenic
TGACCTTCTCAAATTCATCA+AGG 0.579050 7_2:-65730686 None:intergenic
TAACCGATTTGATCCGGAGA+AGG 0.582964 7_2:-65731358 None:intergenic
TATGTACATCAAGCATAAGT+GGG 0.587715 7_2:+65730981 Msa1069890:CDS
CTAGTGAACTATGTGGAGCT+GGG 0.592576 7_2:+65731077 Msa1069890:CDS
GCTCGAGTGATGATACCAAA+GGG 0.594724 7_2:+65730944 Msa1069890:CDS
CAGAATCTCATAGTTGATGG+AGG 0.597836 7_2:+65731307 Msa1069890:CDS
ACTTGGGCCAAAAGTTGCAA+AGG 0.606003 7_2:+65730500 Msa1069890:CDS
AGAATCTCATAGTTGATGGA+GGG 0.612187 7_2:+65731308 Msa1069890:CDS
TGTGACCCTCGAACAGATAG+GGG 0.612645 7_2:+65731177 Msa1069890:CDS
TGATCAAGATCTGATTGTAA+GGG 0.615673 7_2:-65727859 None:intergenic
GTTGTCGGCGATGATTACTT+GGG 0.621879 7_2:-65730469 None:intergenic
CCATGAATTTGTCCAACATG+GGG 0.626707 7_2:+65730446 Msa1069890:CDS
ACCAGAGCTAGATCCATCAA+AGG 0.636456 7_2:+65727818 Msa1069890:five_prime_UTR
GGCTAGTGTTCTGAGCATGA+TGG 0.637926 7_2:-65727888 None:intergenic
ATCATAACTGGATCAGCAAG+TGG 0.638092 7_2:+65730405 Msa1069890:CDS
CAATTATACAAAGATTGTTG+AGG 0.642862 7_2:-65731461 None:intergenic
TATCAAAGTCTACAATACCA+GGG 0.649064 7_2:+65731038 Msa1069890:CDS
AAAGTCTACAATACCAGGGG+TGG 0.651264 7_2:+65731042 Msa1069890:CDS
GGCTCGAGTGATGATACCAA+AGG 0.651712 7_2:+65730943 Msa1069890:CDS
CCGACAACGACACTAAACTT+GGG 0.660224 7_2:+65730484 Msa1069890:CDS
ATCAAAGTCTACAATACCAG+GGG 0.674916 7_2:+65731039 Msa1069890:CDS
GGAATGTGATGTCACTGTTG+AGG 0.683235 7_2:+65730548 Msa1069890:CDS
ATTGGTGTAGGAATTGCAGT+TGG 0.686643 7_2:-65731121 None:intergenic
AGTGGACTTAGTGCTCTGAA+AGG 0.687194 7_2:+65731208 Msa1069890:CDS
ACCAGGGGTGGTGAAATCTG+TGG 0.689503 7_2:+65731054 Msa1069890:CDS
TCTGAAAGGTGCTAAATGTG+AGG 0.706614 7_2:+65731222 Msa1069890:CDS
TCTGTGGCTAGTGAACTATG+TGG 0.715679 7_2:+65731070 Msa1069890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATAGAATAATTGTT+TGG - chr7_2:65727959-65727978 None:intergenic 10.0%
!! CTTAAATACAATAAAAAAAT+TGG + chr7_2:65728511-65728530 Msa1069890:intron 10.0%
!! AATTTATTTAACATGAATTT+GGG - chr7_2:65730818-65730837 None:intergenic 10.0%
!! AAATTTATTTAACATGAATT+TGG - chr7_2:65730819-65730838 None:intergenic 10.0%
!! AATTAAAAAAGAATGACTAT+TGG - chr7_2:65727928-65727947 None:intergenic 15.0%
!!! TTTAAATCTTTTATATATGC+AGG + chr7_2:65728043-65728062 Msa1069890:intron 15.0%
!!! TTAAATCTTTTATATATGCA+GGG + chr7_2:65728044-65728063 Msa1069890:intron 15.0%
!! TCCAAAAATAAATAAACTAT+AGG + chr7_2:65728326-65728345 Msa1069890:intron 15.0%
!!! TCCTATAGTTTATTTATTTT+TGG - chr7_2:65728330-65728349 None:intergenic 15.0%
!! CAACTGTAAATAAATAAAAA+AGG - chr7_2:65728729-65728748 None:intergenic 15.0%
!!! GTTCTTTTAAACAATTTATT+TGG + chr7_2:65729094-65729113 Msa1069890:intron 15.0%
!! TACGAATGAAAATAAAAAAT+AGG + chr7_2:65729169-65729188 Msa1069890:intron 15.0%
!!! TCATTAGTTTCATTATTTTA+TGG - chr7_2:65729209-65729228 None:intergenic 15.0%
!! AATAAAATTGAATTAAACAG+TGG - chr7_2:65729274-65729293 None:intergenic 15.0%
!! GTTCAATTAAAAAATAAAAG+TGG - chr7_2:65729512-65729531 None:intergenic 15.0%
!! ATTGATTAATTTAGAAATCT+AGG - chr7_2:65729567-65729586 None:intergenic 15.0%
!! AAATAAATAATGATTGATGA+TGG - chr7_2:65730239-65730258 None:intergenic 15.0%
!! ACAAAAACATAAGAAAAATA+TGG + chr7_2:65730782-65730801 Msa1069890:intron 15.0%
!! CAAAAACATAAGAAAAATAT+GGG + chr7_2:65730783-65730802 Msa1069890:intron 15.0%
!! TTTGAAAGAAAAGAAATGAT+GGG - chr7_2:65727795-65727814 None:intergenic 20.0%
!! ATTTGAAAGAAAAGAAATGA+TGG - chr7_2:65727796-65727815 None:intergenic 20.0%
!! ATAAGTATTCTGTTCTATAT+AGG + chr7_2:65727988-65728007 Msa1069890:intron 20.0%
!! TACTATAATTGCACATAATA+TGG - chr7_2:65728200-65728219 None:intergenic 20.0%
!! CAATGAATCAAAAGTAATAT+AGG + chr7_2:65728873-65728892 Msa1069890:intron 20.0%
!!! ACTTTTGATTCAAACATATT+CGG - chr7_2:65728909-65728928 None:intergenic 20.0%
!! TGTTTGAATCAAAAGTAATA+TGG + chr7_2:65728913-65728932 Msa1069890:intron 20.0%
!! GTTTGAATCAAAAGTAATAT+GGG + chr7_2:65728914-65728933 Msa1069890:intron 20.0%
!!! CTTTTAAACAATTTATTTGG+TGG + chr7_2:65729097-65729116 Msa1069890:intron 20.0%
!! AAATGAAATTGAATTCAAGT+GGG - chr7_2:65729132-65729151 None:intergenic 20.0%
!! TAAATGAAATTGAATTCAAG+TGG - chr7_2:65729133-65729152 None:intergenic 20.0%
!!! ATACTTTAGTTTAGAAACAA+TGG + chr7_2:65729376-65729395 Msa1069890:intron 20.0%
!!! CACTTTTTTTTTACAATGTT+TGG - chr7_2:65729597-65729616 None:intergenic 20.0%
!! ATTATTATCTTGAAGAGATA+GGG - chr7_2:65729737-65729756 None:intergenic 20.0%
!! AATTATTATCTTGAAGAGAT+AGG - chr7_2:65729738-65729757 None:intergenic 20.0%
!! AATATGCTTACAAAAATGAA+TGG - chr7_2:65729800-65729819 None:intergenic 20.0%
!!! TAAGCATTTTTATAAGCATA+TGG + chr7_2:65729827-65729846 Msa1069890:intron 20.0%
!! AGACAAGTTTATATTTGAAA+GGG + chr7_2:65729917-65729936 Msa1069890:intron 20.0%
!!! TTACTTTTCAAAGTCATTTA+AGG + chr7_2:65730074-65730093 Msa1069890:intron 20.0%
!! ATCTTACAAAAAAATCTTGT+TGG + chr7_2:65730105-65730124 Msa1069890:intron 20.0%
!!! CATTCAATTCAATTCATTTT+TGG + chr7_2:65730350-65730369 Msa1069890:intron 20.0%
!!! TTTGTTTTCTAGTTTCTTTT+TGG - chr7_2:65730767-65730786 None:intergenic 20.0%
!! AATAAATGTTATTCATGTAG+TGG + chr7_2:65731415-65731434 Msa1069890:three_prime_UTR 20.0%
!! GTTTTGTCTCTTACAAATAT+AGG - chr7_2:65727739-65727758 None:intergenic 25.0%
! TCATTAAAGCTCTTTACTAT+GGG + chr7_2:65728153-65728172 Msa1069890:intron 25.0%
!!! TTTGGAATACTTTTATCCTA+TGG - chr7_2:65728312-65728331 None:intergenic 25.0%
! TGTCAATTTAGAAGAAAGTT+GGG - chr7_2:65728396-65728415 None:intergenic 25.0%
! ATGTCAATTTAGAAGAAAGT+TGG - chr7_2:65728397-65728416 None:intergenic 25.0%
!! TATTGTATTTAAGACAAGAG+AGG - chr7_2:65728504-65728523 None:intergenic 25.0%
!! TAAGTATATGTTTTCAACAC+AGG + chr7_2:65728565-65728584 Msa1069890:intron 25.0%
! CTAACAAATTATCTTCACAT+AGG - chr7_2:65728609-65728628 None:intergenic 25.0%
! AAGAACTATAATTACCATGT+CGG - chr7_2:65729080-65729099 None:intergenic 25.0%
! AGAATCATTAGTTGAGTTAT+TGG - chr7_2:65729539-65729558 None:intergenic 25.0%
! AATGATTATGATCCTGAATT+TGG - chr7_2:65729671-65729690 None:intergenic 25.0%
! TCAAATATAAACTTGTCTCA+AGG - chr7_2:65729915-65729934 None:intergenic 25.0%
! GAGACAAGTTTATATTTGAA+AGG + chr7_2:65729916-65729935 Msa1069890:intron 25.0%
! GACAAGTTTATATTTGAAAG+GGG + chr7_2:65729918-65729937 Msa1069890:intron 25.0%
!! TCATGGAGTATCAATAAAAA+TGG + chr7_2:65729968-65729987 Msa1069890:intron 25.0%
! TGAAAGTAACACAAATCTAA+AGG + chr7_2:65730034-65730053 Msa1069890:intron 25.0%
!! AAATGACTTTGAAAAGTAAG+AGG - chr7_2:65730073-65730092 None:intergenic 25.0%
! AATCTTGTTGGATAAATCTT+CGG + chr7_2:65730117-65730136 Msa1069890:intron 25.0%
!!! TCATTTCTTTTTCAACAAGT+TGG - chr7_2:65730159-65730178 None:intergenic 25.0%
!!! TAGTTTACCATAGTTTGTTA+TGG - chr7_2:65730601-65730620 None:intergenic 25.0%
! AAACATAAGAAAAATATGGG+AGG + chr7_2:65730786-65730805 Msa1069890:intron 25.0%
!! GCATTACAACTTTAAGTTAA+AGG - chr7_2:65730849-65730868 None:intergenic 25.0%
! CTAAAATGATGAGTTTATTG+TGG - chr7_2:65730910-65730929 None:intergenic 25.0%
!! CACAATAAACTCATCATTTT+AGG + chr7_2:65730908-65730927 Msa1069890:intron 25.0%
!!! CATTTTAGGTATAAAACATG+CGG + chr7_2:65730922-65730941 Msa1069890:intron 25.0%
! TATGCTTGATGTACATATAA+TGG - chr7_2:65730978-65730997 None:intergenic 25.0%
!! TATTCATAATTTTCCACAAC+CGG - chr7_2:65731399-65731418 None:intergenic 25.0%
! CAATTATACAAAGATTGTTG+AGG - chr7_2:65731464-65731483 None:intergenic 25.0%
CACGAAATTATTCTCTTAGT+GGG - chr7_2:65727710-65727729 None:intergenic 30.0%
ACACGAAATTATTCTCTTAG+TGG - chr7_2:65727711-65727730 None:intergenic 30.0%
TTGTCTCTTACAAATATAGG+AGG - chr7_2:65727736-65727755 None:intergenic 30.0%
TGATCAAGATCTGATTGTAA+GGG - chr7_2:65727862-65727881 None:intergenic 30.0%
CTCATTAAAGCTCTTTACTA+TGG + chr7_2:65728152-65728171 Msa1069890:intron 30.0%
!!! ATTTTTTTTCCTTGATTCCC+TGG + chr7_2:65728254-65728273 Msa1069890:intron 30.0%
! ACATTTAGAGTAGCATAATC+AGG - chr7_2:65728281-65728300 None:intergenic 30.0%
CTAAATGTACACTAAACCAT+AGG + chr7_2:65728293-65728312 Msa1069890:intron 30.0%
TCTAAATTGACATGTATGAG+TGG + chr7_2:65728404-65728423 Msa1069890:intron 30.0%
! GTGTCAAAAGTTTTACAATG+TGG - chr7_2:65728442-65728461 None:intergenic 30.0%
GCAAAATGTCAAATAAGTAC+AGG - chr7_2:65728805-65728824 None:intergenic 30.0%
TCAGTTCATTTCGGATAATT+TGG - chr7_2:65728968-65728987 None:intergenic 30.0%
CTATTGTACTATGTATGATC+AGG + chr7_2:65729347-65729366 Msa1069890:intron 30.0%
TAGTTTAGAAACAATGGCAA+CGG + chr7_2:65729382-65729401 Msa1069890:intron 30.0%
! GTTTATGTTTGCTAAATCCA+TGG - chr7_2:65729469-65729488 None:intergenic 30.0%
AATTTGGCTACACAACAAAA+AGG - chr7_2:65729655-65729674 None:intergenic 30.0%
! TGGACGTAGTATTTAAAGTA+TGG - chr7_2:65729776-65729795 None:intergenic 30.0%
TGCTTACAAAAATGAATGGA+TGG - chr7_2:65729796-65729815 None:intergenic 30.0%
AAGGTCTCACTACTTTAATT+TGG - chr7_2:65729896-65729915 None:intergenic 30.0%
!!! TTTCTTTTTCAACAAGTTGG+AGG - chr7_2:65730156-65730175 None:intergenic 30.0%
GAATGAATGAGAATCATCAT+GGG - chr7_2:65730335-65730354 None:intergenic 30.0%
TGAATGAATGAGAATCATCA+TGG - chr7_2:65730336-65730355 None:intergenic 30.0%
GGAAAAATTGCAATCATAAC+TGG + chr7_2:65730393-65730412 Msa1069890:CDS 30.0%
AACTTTGCCATAACAAACTA+TGG + chr7_2:65730591-65730610 Msa1069890:CDS 30.0%
ATATGTACATCAAGCATAAG+TGG + chr7_2:65730980-65730999 Msa1069890:CDS 30.0%
TATGTACATCAAGCATAAGT+GGG + chr7_2:65730981-65731000 Msa1069890:CDS 30.0%
TTTGATATTGTGTATGGATG+AGG - chr7_2:65731025-65731044 None:intergenic 30.0%
GTAGACTTTGATATTGTGTA+TGG - chr7_2:65731031-65731050 None:intergenic 30.0%
ATATCAAAGTCTACAATACC+AGG + chr7_2:65731037-65731056 Msa1069890:CDS 30.0%
TATCAAAGTCTACAATACCA+GGG + chr7_2:65731038-65731057 Msa1069890:CDS 30.0%
CCAATTTGATACAATGACAT+TGG - chr7_2:65731142-65731161 None:intergenic 30.0%
CCAATGTCATTGTATCAAAT+TGG + chr7_2:65731139-65731158 Msa1069890:CDS 30.0%
CAAATTGGAAAGTTTATTCC+TGG + chr7_2:65731154-65731173 Msa1069890:CDS 30.0%
! AGGAAACGCGAAATTTTTAA+TGG - chr7_2:65731341-65731360 None:intergenic 30.0%
!! GATGGGTTGATGAGTATTTA+AGG - chr7_2:65727778-65727797 None:intergenic 35.0%
GTGATCAAGATCTGATTGTA+AGG - chr7_2:65727863-65727882 None:intergenic 35.0%
CTATTGGAGTATATTGAACC+TGG - chr7_2:65727912-65727931 None:intergenic 35.0%
AGAGACACGTACACTTAAAA+AGG - chr7_2:65728762-65728781 None:intergenic 35.0%
GTCAAATAAGTACAGGAGTT+AGG - chr7_2:65728798-65728817 None:intergenic 35.0%
CTCATGAGTTCAGTTCATTT+CGG - chr7_2:65728977-65728996 None:intergenic 35.0%
CATATGAACATGCATATTGG+AGG - chr7_2:65729446-65729465 None:intergenic 35.0%
TGGCATATGAACATGCATAT+TGG - chr7_2:65729449-65729468 None:intergenic 35.0%
ATATGCATGTTCATATGCCA+TGG + chr7_2:65729449-65729468 Msa1069890:intron 35.0%
! TTTGTTGTGTAGCCAAATTC+AGG + chr7_2:65729656-65729675 Msa1069890:intron 35.0%
!!! CATTTTTGGTTCCAAAAAGC+AGG + chr7_2:65730364-65730383 Msa1069890:intron 35.0%
!! TTTCCTTCTAACCTGCTTTT+TGG - chr7_2:65730378-65730397 None:intergenic 35.0%
CCAAAAGTTGCAAAGGAATT+GGG + chr7_2:65730507-65730526 Msa1069890:CDS 35.0%
TGACCTTCTCAAATTCATCA+AGG - chr7_2:65730689-65730708 None:intergenic 35.0%
GTCATGAGAATCAATGTAAC+AGG + chr7_2:65730705-65730724 Msa1069890:CDS 35.0%
AATGTAACAGGAGTTATTGC+AGG + chr7_2:65730717-65730736 Msa1069890:CDS 35.0%
ATCAAAGTCTACAATACCAG+GGG + chr7_2:65731039-65731058 Msa1069890:CDS 35.0%
TGATACAATGACATTGGTGT+AGG - chr7_2:65731136-65731155 None:intergenic 35.0%
GATGATGCTAAGTTTATCTC+AGG + chr7_2:65731283-65731302 Msa1069890:CDS 35.0%
!! AGAATCTCATAGTTGATGGA+GGG + chr7_2:65731308-65731327 Msa1069890:CDS 35.0%
GTTAGCTAGGGTTTAAATTC+CGG + chr7_2:65731377-65731396 Msa1069890:exon 35.0%
!! AGAAGAGTGTTGACCTTTGA+TGG - chr7_2:65727834-65727853 None:intergenic 40.0%
AACCAAACCATTGCTGAAGT+TGG - chr7_2:65728082-65728101 None:intergenic 40.0%
AGCAGATTCTATGCAACAGT+TGG + chr7_2:65728111-65728130 Msa1069890:CDS 40.0%
AGATTCTATGCAACAGTTGG+TGG + chr7_2:65728114-65728133 Msa1069890:CDS 40.0%
!!! GCGCTTTTTTGTGTTAACTC+CGG + chr7_2:65729035-65729054 Msa1069890:intron 40.0%
ACGGATTTCTGTGAAACACA+TGG + chr7_2:65729401-65729420 Msa1069890:intron 40.0%
CATCCTTCATCGCTAATTGA+AGG - chr7_2:65729945-65729964 None:intergenic 40.0%
CTTCAATTAGCGATGAAGGA+TGG + chr7_2:65729943-65729962 Msa1069890:intron 40.0%
GAAAGACAAAAGGAGTTGCT+TGG - chr7_2:65730290-65730309 None:intergenic 40.0%
TGTGAGAAAAGAAAGATGGG+GGG - chr7_2:65730312-65730331 None:intergenic 40.0%
GTGTGAGAAAAGAAAGATGG+GGG - chr7_2:65730313-65730332 None:intergenic 40.0%
GGTGTGAGAAAAGAAAGATG+GGG - chr7_2:65730314-65730333 None:intergenic 40.0%
GGGTGTGAGAAAAGAAAGAT+GGG - chr7_2:65730315-65730334 None:intergenic 40.0%
TGGGTGTGAGAAAAGAAAGA+TGG - chr7_2:65730316-65730335 None:intergenic 40.0%
GTTCCAAAAAGCAGGTTAGA+AGG + chr7_2:65730372-65730391 Msa1069890:intron 40.0%
ATCATAACTGGATCAGCAAG+TGG + chr7_2:65730405-65730424 Msa1069890:CDS 40.0%
CCCATGTTGGACAAATTCAT+GGG - chr7_2:65730448-65730467 None:intergenic 40.0%
CCCATGAATTTGTCCAACAT+GGG + chr7_2:65730445-65730464 Msa1069890:CDS 40.0%
CCATGAATTTGTCCAACATG+GGG + chr7_2:65730446-65730465 Msa1069890:CDS 40.0%
GCCAAAAGTTGCAAAGGAAT+TGG + chr7_2:65730506-65730525 Msa1069890:CDS 40.0%
! CCCAATTCCTTTGCAACTTT+TGG - chr7_2:65730510-65730529 None:intergenic 40.0%
ATTCCACATACTGTGCTGAA+TGG - chr7_2:65730533-65730552 None:intergenic 40.0%
GTTCACTGCTTCTTCTACTT+GGG - chr7_2:65730574-65730593 None:intergenic 40.0%
AGTTCACTGCTTCTTCTACT+TGG - chr7_2:65730575-65730594 None:intergenic 40.0%
GACATCATGTACAACAATGC+TGG + chr7_2:65730621-65730640 Msa1069890:CDS 40.0%
TACAACAATGCTGGCATAAC+AGG + chr7_2:65730630-65730649 Msa1069890:CDS 40.0%
! GTTATGCTTGGTGGGATTAT+TGG - chr7_2:65730657-65730676 None:intergenic 40.0%
CCAATTCTGTTATGCTTGGT+GGG - chr7_2:65730665-65730684 None:intergenic 40.0%
TCCAATTCTGTTATGCTTGG+TGG - chr7_2:65730666-65730685 None:intergenic 40.0%
AGGTCCAATTCTGTTATGCT+TGG - chr7_2:65730669-65730688 None:intergenic 40.0%
GGACCTTGATGAATTTGAGA+AGG + chr7_2:65730683-65730702 Msa1069890:CDS 40.0%
TGATGATACCAAAGGGCTAT+GGG + chr7_2:65730951-65730970 Msa1069890:CDS 40.0%
!! TCAAGCATAAGTGGGCTATT+TGG + chr7_2:65730989-65731008 Msa1069890:CDS 40.0%
ATTGGTGTAGGAATTGCAGT+TGG - chr7_2:65731124-65731143 None:intergenic 40.0%
AATTTCCCCTATCTGTTCGA+GGG - chr7_2:65731185-65731204 None:intergenic 40.0%
CAGATAGGGGAAATTGTTAG+TGG + chr7_2:65731190-65731209 Msa1069890:CDS 40.0%
!! TCTGAAAGGTGCTAAATGTG+AGG + chr7_2:65731222-65731241 Msa1069890:CDS 40.0%
GGTCAGAATCTCATAGTTGA+TGG + chr7_2:65731304-65731323 Msa1069890:CDS 40.0%
!! CAGAATCTCATAGTTGATGG+AGG + chr7_2:65731307-65731326 Msa1069890:CDS 40.0%
AAATTTCGCGTTTCCTTCTC+CGG + chr7_2:65731345-65731364 Msa1069890:CDS 40.0%
TTTCCTTCTCCGGATCAAAT+CGG + chr7_2:65731355-65731374 Msa1069890:CDS 40.0%
TAGGGTTTAAATTCCGGTTG+TGG + chr7_2:65731383-65731402 Msa1069890:three_prime_UTR 40.0%
ACCAGAGCTAGATCCATCAA+AGG + chr7_2:65727818-65727837 Msa1069890:five_prime_UTR 45.0%
! ACCTTTGATGGATCTAGCTC+TGG - chr7_2:65727822-65727841 None:intergenic 45.0%
AAGCTCACCAACTTCAGCAA+TGG + chr7_2:65728072-65728091 Msa1069890:CDS 45.0%
CACCAACTTCAGCAATGGTT+TGG + chr7_2:65728077-65728096 Msa1069890:CDS 45.0%
!! ATGCAACAGTTGGTGGAAGA+AGG + chr7_2:65728121-65728140 Msa1069890:CDS 45.0%
TAATCAGGACCAGGGAATCA+AGG - chr7_2:65728266-65728285 None:intergenic 45.0%
GAGTAGCATAATCAGGACCA+GGG - chr7_2:65728274-65728293 None:intergenic 45.0%
AGAGTAGCATAATCAGGACC+AGG - chr7_2:65728275-65728294 None:intergenic 45.0%
GTACGTGTCTCTCACTTTAG+AGG + chr7_2:65728770-65728789 Msa1069890:intron 45.0%
TGACAGACTCTCACAACGTA+AGG + chr7_2:65728940-65728959 Msa1069890:intron 45.0%
TGTGTTAACTCCGGATCCTA+TGG + chr7_2:65729044-65729063 Msa1069890:intron 45.0%
GTGTTAACTCCGGATCCTAT+GGG + chr7_2:65729045-65729064 Msa1069890:intron 45.0%
GGACCTTCAATTAGCGATGA+AGG + chr7_2:65729939-65729958 Msa1069890:intron 45.0%
! CAAGTTGGAGGATGATGTTG+TGG - chr7_2:65730144-65730163 None:intergenic 45.0%
AAGATGGGGGGAAAGACAAA+AGG - chr7_2:65730300-65730319 None:intergenic 45.0%
! ATCAGCAAGTGGACTTGGAA+AGG + chr7_2:65730416-65730435 Msa1069890:CDS 45.0%
GCCCATGAATTTGTCCAACA+TGG + chr7_2:65730444-65730463 Msa1069890:CDS 45.0%
CCCCATGTTGGACAAATTCA+TGG - chr7_2:65730449-65730468 None:intergenic 45.0%
GTTGTCGGCGATGATTACTT+GGG - chr7_2:65730472-65730491 None:intergenic 45.0%
! CCCAAGTTTAGTGTCGTTGT+CGG - chr7_2:65730487-65730506 None:intergenic 45.0%
CCGACAACGACACTAAACTT+GGG + chr7_2:65730484-65730503 Msa1069890:CDS 45.0%
ACTTGGGCCAAAAGTTGCAA+AGG + chr7_2:65730500-65730519 Msa1069890:CDS 45.0%
GGAATGTGATGTCACTGTTG+AGG + chr7_2:65730548-65730567 Msa1069890:CDS 45.0%
CCCACCAAGCATAACAGAAT+TGG + chr7_2:65730662-65730681 Msa1069890:CDS 45.0%
GCTCGAGTGATGATACCAAA+GGG + chr7_2:65730944-65730963 Msa1069890:CDS 45.0%
GTGATGATACCAAAGGGCTA+TGG + chr7_2:65730950-65730969 Msa1069890:CDS 45.0%
!! ATAATGGACCCATAGCCCTT+TGG - chr7_2:65730962-65730981 None:intergenic 45.0%
!! AGCATAAGTGGGCTATTTGG+TGG + chr7_2:65730992-65731011 Msa1069890:CDS 45.0%
!! GCATAAGTGGGCTATTTGGT+GGG + chr7_2:65730993-65731012 Msa1069890:CDS 45.0%
AAAGTCTACAATACCAGGGG+TGG + chr7_2:65731042-65731061 Msa1069890:CDS 45.0%
TCTGTGGCTAGTGAACTATG+TGG + chr7_2:65731070-65731089 Msa1069890:CDS 45.0%
CTAGTGAACTATGTGGAGCT+GGG + chr7_2:65731077-65731096 Msa1069890:CDS 45.0%
CAATTTCCCCTATCTGTTCG+AGG - chr7_2:65731186-65731205 None:intergenic 45.0%
! AGTGGACTTAGTGCTCTGAA+AGG + chr7_2:65731208-65731227 Msa1069890:CDS 45.0%
TGCTAGAGCTGCATTGTACT+TGG + chr7_2:65731255-65731274 Msa1069890:CDS 45.0%
!! TAACCGATTTGATCCGGAGA+AGG - chr7_2:65731361-65731380 None:intergenic 45.0%
!! CCTAGCTAACCGATTTGATC+CGG - chr7_2:65731367-65731386 None:intergenic 45.0%
! CGGATCAAATCGGTTAGCTA+GGG + chr7_2:65731365-65731384 Msa1069890:exon 45.0%
!! ATTAAAAATTAAAGAAAAAA+AGG - chr7_2:65728829-65728848 None:intergenic 5.0%
! GGCTAGTGTTCTGAGCATGA+TGG - chr7_2:65727891-65727910 None:intergenic 50.0%
TCATGCTCAGAACACTAGCC+AGG + chr7_2:65727891-65727910 Msa1069890:exon 50.0%
AACTCCGGATCCTATGGGAA+AGG + chr7_2:65729050-65729069 Msa1069890:intron 50.0%
ACTCCGGATCCTATGGGAAA+GGG + chr7_2:65729051-65729070 Msa1069890:intron 50.0%
TGTCCCTTTCCCATAGGATC+CGG - chr7_2:65729057-65729076 None:intergenic 50.0%
CATATTGGAGGCAAGCTTGC+GGG - chr7_2:65729434-65729453 None:intergenic 50.0%
GCATATTGGAGGCAAGCTTG+CGG - chr7_2:65729435-65729454 None:intergenic 50.0%
AGCGATGAAGGATGGAGTCA+TGG + chr7_2:65729951-65729970 Msa1069890:intron 50.0%
! ACTGGATCAGCAAGTGGACT+TGG + chr7_2:65730411-65730430 Msa1069890:CDS 50.0%
TGATTACTTGGGCCCCATGT+TGG - chr7_2:65730461-65730480 None:intergenic 50.0%
CGTTGTCGGCGATGATTACT+TGG - chr7_2:65730473-65730492 None:intergenic 50.0%
GCCGACAACGACACTAAACT+TGG + chr7_2:65730483-65730502 Msa1069890:CDS 50.0%
GGCTCGAGTGATGATACCAA+AGG + chr7_2:65730943-65730962 Msa1069890:CDS 50.0%
GCTAGTGAACTATGTGGAGC+TGG + chr7_2:65731076-65731095 Msa1069890:CDS 50.0%
GTGTGACCCTCGAACAGATA+GGG + chr7_2:65731176-65731195 Msa1069890:CDS 50.0%
TGTGACCCTCGAACAGATAG+GGG + chr7_2:65731177-65731196 Msa1069890:CDS 50.0%
! CCGGATCAAATCGGTTAGCT+AGG + chr7_2:65731364-65731383 Msa1069890:exon 50.0%
! TGTCGGTGTCCCTTTCCCAT+AGG - chr7_2:65729063-65729082 None:intergenic 55.0%
ATGGGAAAGGGACACCGACA+TGG + chr7_2:65729063-65729082 Msa1069890:intron 55.0%
GGGCCATTCAGCACAGTATG+TGG + chr7_2:65730527-65730546 Msa1069890:CDS 55.0%
!! AGTGGGCTATTTGGTGGGCT+TGG + chr7_2:65730998-65731017 Msa1069890:CDS 55.0%
!! GTGGGCTATTTGGTGGGCTT+GGG + chr7_2:65730999-65731018 Msa1069890:CDS 55.0%
ACCAGGGGTGGTGAAATCTG+TGG + chr7_2:65731054-65731073 Msa1069890:CDS 55.0%
ATCTGTTCGAGGGTCACACC+AGG - chr7_2:65731175-65731194 None:intergenic 55.0%
GGTGTGACCCTCGAACAGAT+AGG + chr7_2:65731175-65731194 Msa1069890:CDS 55.0%
GCCACAGATTTCACCACCCC+TGG - chr7_2:65731058-65731077 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65727700 65731509 65727700 ID=Msa1069890;Name=Msa1069890
chr7_2 mRNA 65727700 65731509 65727700 ID=Msa1069890-mRNA-1;Parent=Msa1069890;Name=Msa1069890-mRNA-1;_AED=0.07;_eAED=0.07;_QI=193|1|1|1|1|1|4|128|300
chr7_2 exon 65727700 65727912 65727700 ID=Msa1069890-mRNA-1:exon:13865;Parent=Msa1069890-mRNA-1
chr7_2 exon 65728065 65728142 65728065 ID=Msa1069890-mRNA-1:exon:13866;Parent=Msa1069890-mRNA-1
chr7_2 exon 65730386 65730738 65730386 ID=Msa1069890-mRNA-1:exon:13867;Parent=Msa1069890-mRNA-1
chr7_2 exon 65730930 65731509 65730930 ID=Msa1069890-mRNA-1:exon:13868;Parent=Msa1069890-mRNA-1
chr7_2 five_prime_UTR 65727700 65727892 65727700 ID=Msa1069890-mRNA-1:five_prime_utr;Parent=Msa1069890-mRNA-1
chr7_2 CDS 65727893 65727912 65727893 ID=Msa1069890-mRNA-1:cds;Parent=Msa1069890-mRNA-1
chr7_2 CDS 65728065 65728142 65728065 ID=Msa1069890-mRNA-1:cds;Parent=Msa1069890-mRNA-1
chr7_2 CDS 65730386 65730738 65730386 ID=Msa1069890-mRNA-1:cds;Parent=Msa1069890-mRNA-1
chr7_2 CDS 65730930 65731381 65730930 ID=Msa1069890-mRNA-1:cds;Parent=Msa1069890-mRNA-1
chr7_2 three_prime_UTR 65731382 65731509 65731382 ID=Msa1069890-mRNA-1:three_prime_utr;Parent=Msa1069890-mRNA-1
Gene Sequence

>Msa1069890

ATGCTCAGAACACTAGCCAGGGAGTTGAAGCTCACCAACTTCAGCAATGGTTTGGTTAAAAAACGCAGCAGATTCTATGCAACAGTTGGTGGAAGAAGGTTAGAAGGAAAAATTGCAATCATAACTGGATCAGCAAGTGGACTTGGAAAGGCAACAGCCCATGAATTTGTCCAACATGGGGCCCAAGTAATCATCGCCGACAACGACACTAAACTTGGGCCAAAAGTTGCAAAGGAATTGGGCCATTCAGCACAGTATGTGGAATGTGATGTCACTGTTGAGGCCCAAGTAGAAGAAGCAGTGAACTTTGCCATAACAAACTATGGTAAACTAGACATCATGTACAACAATGCTGGCATAACAGGACCAATAATCCCACCAAGCATAACAGAATTGGACCTTGATGAATTTGAGAAGGTCATGAGAATCAATGTAACAGGAGTTATTGCAGGTATAAAACATGCGGCTCGAGTGATGATACCAAAGGGCTATGGGTCCATTATATGTACATCAAGCATAAGTGGGCTATTTGGTGGGCTTGGGCCTCATCCATACACAATATCAAAGTCTACAATACCAGGGGTGGTGAAATCTGTGGCTAGTGAACTATGTGGAGCTGGGATTAGAGTCAATTGCATATCACCAACTGCAATTCCTACACCAATGTCATTGTATCAAATTGGAAAGTTTATTCCTGGTGTGACCCTCGAACAGATAGGGGAAATTGTTAGTGGACTTAGTGCTCTGAAAGGTGCTAAATGTGAGGACATTGATGTTGCTAGAGCTGCATTGTACTTGGCATCAGATGATGCTAAGTTTATCTCAGGTCAGAATCTCATAGTTGATGGAGGGTTTACTTCCATTAAAAATTTCGCGTTTCCTTCTCCGGATCAAATCGGTTAG
Protein sequence

>Msa1069890

MLRTLARELKLTNFSNGLVKKRSRFYATVGGRRLEGKIAIITGSASGLGKATAHEFVQHGAQVIIADNDTKLGPKVAKELGHSAQYVECDVTVEAQVEEAVNFAITNYGKLDIMYNNAGITGPIIPPSITELDLDEFEKVMRINVTGVIAGIKHAARVMIPKGYGSIICTSSISGLFGGLGPHPYTISKSTIPGVVKSVASELCGAGIRVNCISPTAIPTPMSLYQIGKFIPGVTLEQIGEIVSGLSALKGAKCEDIDVARAALYLASDDAKFISGQNLIVDGGFTSIKNFAFPSPDQIG*