Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922190 | XP_024641908.1 | 91.691 | 337 | 6 | 1 | 1 | 337 | 1 | 315 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922190 | sp|Q9C9X3|ANXD5_ARATH | 50.442 | 339 | 141 | 3 | 1 | 336 | 1 | 315 | 5.20e-119 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090380 | Msa0922190 | 0.809544 | 1.795906e-50 | -8.615850e-47 |
| Msa0635270 | Msa0922190 | 0.816848 | 4.476051e-52 | -8.615850e-47 |
| Msa0641130 | Msa0922190 | 0.807870 | 4.092714e-50 | -8.615850e-47 |
| Msa0772280 | Msa0922190 | 0.817089 | 3.950296e-52 | -8.615850e-47 |
| Msa0137860 | Msa0922190 | 0.802708 | 4.936151e-49 | -8.615850e-47 |
| Msa0370860 | Msa0922190 | 0.800690 | 1.280459e-48 | -8.615850e-47 |
| Msa0319240 | Msa0922190 | 0.826592 | 2.493318e-54 | -8.615850e-47 |
| Msa0355550 | Msa0922190 | 0.812774 | 3.579045e-51 | -8.615850e-47 |
| Msa0510570 | Msa0922190 | 0.810812 | 9.571245e-51 | -8.615850e-47 |
| Msa0592660 | Msa0922190 | 0.818433 | 1.964880e-52 | -8.615850e-47 |
| Msa0600590 | Msa0922190 | 0.812346 | 4.440167e-51 | -8.615850e-47 |
| Msa0863990 | Msa0922190 | 0.809095 | 2.241603e-50 | -8.615850e-47 |
| Msa0895620 | Msa0922190 | 0.874361 | 7.174297e-68 | -8.615850e-47 |
| Msa0922190 | Msa0945130 | 0.810455 | 1.142960e-50 | -8.615850e-47 |
| Msa0922190 | Msa1030810 | 0.811761 | 5.954571e-51 | -8.615850e-47 |
| Msa0922190 | Msa1069890 | 0.839681 | 1.370085e-57 | -8.615850e-47 |
| Msa0922190 | Msa1119920 | 0.825987 | 3.472444e-54 | -8.615850e-47 |
| Msa0922190 | Msa1128790 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
| Msa0922190 | Msa1237890 | 0.803066 | 4.161931e-49 | -8.615850e-47 |
| Msa0922190 | Msa1256060 | 0.835216 | 1.909037e-56 | -8.615850e-47 |
| Msa0922190 | Msa1259860 | 0.806633 | 7.483870e-50 | -8.615850e-47 |
| Msa0922190 | Msa1296240 | 0.808202 | 3.477951e-50 | -8.615850e-47 |
| Msa0922190 | Msa1433410 | 0.806033 | 1.001342e-49 | -8.615850e-47 |
| Msa0922190 | Msa1443640 | 0.814118 | 1.813252e-51 | -8.615850e-47 |
| Msa0922190 | Msa1451990 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922190 | MtrunA17_Chr6g0479391 | 91.691 | 337 | 6 | 1 | 1 | 337 | 1 | 315 | 0.0 | 630 |
| Msa0922190 | MtrunA17_Chr1g0210981 | 82.196 | 337 | 38 | 1 | 1 | 337 | 1 | 315 | 0.0 | 553 |
| Msa0922190 | MtrunA17_Chr6g0479421 | 82.196 | 337 | 38 | 1 | 1 | 337 | 1 | 315 | 0.0 | 551 |
| Msa0922190 | MtrunA17_Chr6g0479411 | 78.635 | 337 | 50 | 1 | 1 | 337 | 28 | 342 | 0.0 | 545 |
| Msa0922190 | MtrunA17_Chr8g0393281 | 72.321 | 336 | 71 | 1 | 1 | 336 | 1 | 314 | 0.0 | 511 |
| Msa0922190 | MtrunA17_Chr1g0162071 | 55.588 | 340 | 123 | 4 | 1 | 337 | 1 | 315 | 8.01e-131 | 375 |
| Msa0922190 | MtrunA17_Chr8g0352571 | 35.693 | 339 | 189 | 4 | 1 | 334 | 1 | 315 | 5.99e-67 | 213 |
| Msa0922190 | MtrunA17_Chr8g0352621 | 34.821 | 336 | 191 | 5 | 1 | 334 | 1 | 310 | 6.75e-60 | 194 |
| Msa0922190 | MtrunA17_Chr3g0083901 | 33.234 | 337 | 200 | 4 | 1 | 336 | 1 | 313 | 1.34e-58 | 191 |
| Msa0922190 | MtrunA17_Chr5g0425971 | 33.432 | 338 | 199 | 5 | 1 | 336 | 1 | 314 | 1.48e-58 | 191 |
| Msa0922190 | MtrunA17_Chr3g0083921 | 34.604 | 341 | 186 | 5 | 1 | 334 | 1 | 311 | 7.62e-58 | 189 |
| Msa0922190 | MtrunA17_Chr8g0352591 | 33.432 | 338 | 189 | 4 | 1 | 337 | 1 | 303 | 3.91e-57 | 187 |
| Msa0922190 | MtrunA17_Chr8g0382281 | 33.728 | 338 | 194 | 5 | 1 | 334 | 1 | 312 | 4.39e-55 | 182 |
| Msa0922190 | MtrunA17_Chr8g0352611 | 33.234 | 334 | 199 | 3 | 1 | 334 | 1 | 310 | 1.15e-54 | 181 |
| Msa0922190 | MtrunA17_Chr2g0293441 | 32.537 | 335 | 201 | 4 | 1 | 334 | 1 | 311 | 8.85e-54 | 179 |
| Msa0922190 | MtrunA17_Chr6g0461141 | 32.107 | 299 | 167 | 8 | 45 | 332 | 34 | 307 | 8.56e-36 | 132 |
| Msa0922190 | MtrunA17_Chr8g0352581 | 26.748 | 329 | 196 | 6 | 22 | 334 | 12 | 311 | 1.65e-29 | 115 |
| Msa0922190 | MtrunA17_Chr3g0084011 | 48.000 | 75 | 38 | 1 | 1 | 75 | 1 | 74 | 9.15e-14 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922190 | AT1G68090.1 | 50.442 | 339 | 141 | 3 | 1 | 336 | 1 | 315 | 5.28e-120 | 348 |
| Msa0922190 | AT1G68090.2 | 47.080 | 274 | 118 | 3 | 1 | 271 | 1 | 250 | 7.96e-85 | 256 |
| Msa0922190 | AT1G68090.2 | 26.923 | 156 | 104 | 3 | 187 | 333 | 83 | 237 | 7.78e-11 | 62.0 |
| Msa0922190 | AT5G10230.1 | 36.095 | 338 | 192 | 3 | 1 | 337 | 1 | 315 | 1.33e-71 | 225 |
| Msa0922190 | AT5G10220.1 | 36.176 | 340 | 191 | 5 | 1 | 337 | 1 | 317 | 9.82e-71 | 223 |
| Msa0922190 | AT5G65020.1 | 37.092 | 337 | 185 | 5 | 1 | 334 | 1 | 313 | 1.66e-69 | 220 |
| Msa0922190 | AT1G35720.1 | 34.911 | 338 | 195 | 4 | 1 | 336 | 1 | 315 | 3.20e-60 | 196 |
| Msa0922190 | AT5G65020.2 | 35.897 | 312 | 173 | 5 | 26 | 334 | 11 | 298 | 2.73e-59 | 193 |
| Msa0922190 | AT5G12380.1 | 33.333 | 339 | 193 | 6 | 1 | 334 | 1 | 311 | 3.28e-56 | 186 |
| Msa0922190 | AT2G38760.1 | 31.085 | 341 | 205 | 4 | 1 | 334 | 1 | 318 | 2.69e-49 | 167 |
| Msa0922190 | AT2G38750.2 | 28.485 | 330 | 187 | 10 | 26 | 336 | 2 | 301 | 9.57e-28 | 110 |
| Msa0922190 | AT2G38750.1 | 28.485 | 330 | 187 | 10 | 26 | 336 | 19 | 318 | 1.12e-27 | 110 |
Find 84 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCGTTCACTGAATATT+TGG | 0.132806 | 6_2:+60419830 | None:intergenic |
| CTTGCATTTGAGTTTCAATT+AGG | 0.187219 | 6_2:-60419021 | Msa0922190:three_prime_UTR |
| TATAAGGCAATGAAAGGTTT+AGG | 0.249516 | 6_2:-60419322 | Msa0922190:CDS |
| ATGTTTAAATGCTTAAAATT+TGG | 0.250744 | 6_2:-60419077 | Msa0922190:three_prime_UTR |
| ACCTTTGCAAAATACTTTGC+TGG | 0.331697 | 6_2:+60419596 | None:intergenic |
| CTCAATGCAGGTGTTGTATA+AGG | 0.335847 | 6_2:-60419338 | Msa0922190:intron |
| AATGAAGCATCGGGGAATTT+CGG | 0.345214 | 6_2:-60419656 | Msa0922190:CDS |
| GAAATTGAATTAAACACATC+TGG | 0.346566 | 6_2:-60420701 | Msa0922190:CDS |
| CAGTTATACCATTCAAAGTT+TGG | 0.348370 | 6_2:-60420740 | Msa0922190:CDS |
| CTTTCTAGATTCAAAATGTT+AGG | 0.349512 | 6_2:-60420035 | Msa0922190:intron |
| TGAACGAAGCAGTGCGCATT+TGG | 0.353922 | 6_2:-60419818 | Msa0922190:CDS |
| TTGCATTTGAGTTTCAATTA+GGG | 0.367650 | 6_2:-60419020 | Msa0922190:three_prime_UTR |
| TTACTTCCGTGGCCGCTTCA+AGG | 0.381428 | 6_2:+60420801 | None:intergenic |
| ATAAGGCAATGAAAGGTTTA+GGG | 0.382653 | 6_2:-60419321 | Msa0922190:CDS |
| TCTCTAGGAGAAGGAGGAAT+TGG | 0.392592 | 6_2:+60422997 | None:intergenic |
| TTTGTGCTTTCACAGGATTT+GGG | 0.398969 | 6_2:-60421230 | Msa0922190:intron |
| GCACAAACACTCCTCGAATT+AGG | 0.407871 | 6_2:+60418915 | None:intergenic |
| TGTTCAATCATGTTTCGTTT+CGG | 0.410557 | 6_2:-60419117 | Msa0922190:three_prime_UTR |
| ATGTTGCTTTGTATTCTTGT+TGG | 0.414709 | 6_2:+60421145 | None:intergenic |
| GCATCACGTGCTGCAGGGTC+AGG | 0.420816 | 6_2:+60420860 | None:intergenic |
| GGAGCTGAAAGGAAAATTAG+AGG | 0.424898 | 6_2:-60421091 | Msa0922190:intron |
| AACATCTTTGACTAGTGATT+CGG | 0.425606 | 6_2:+60419136 | None:intergenic |
| ATTTCTGCATCACGTGCTGC+AGG | 0.436134 | 6_2:+60420854 | None:intergenic |
| ATCAGACTGCAGTTCTACTT+TGG | 0.440143 | 6_2:-60420886 | Msa0922190:intron |
| CTAATGATAGCACACTCATA+AGG | 0.441949 | 6_2:-60419297 | Msa0922190:CDS |
| GATAAACGCCAAACTTTGAA+TGG | 0.462297 | 6_2:+60420732 | None:intergenic |
| ACCGATTTGTGTCTGACATC+GGG | 0.469984 | 6_2:-60418943 | Msa0922190:three_prime_UTR |
| TCCCGATGTCAGACACAAAT+CGG | 0.476912 | 6_2:+60418942 | None:intergenic |
| GCTTTCGAAACGCTTAGTTT+CGG | 0.477988 | 6_2:-60421112 | Msa0922190:CDS |
| CACGTGATGCAGAAATCATT+AGG | 0.480060 | 6_2:-60420847 | Msa0922190:CDS |
| GCAGTAAAGAATGAAGCATC+GGG | 0.483236 | 6_2:-60419665 | Msa0922190:CDS |
| TCGTATTATCATGACATGTA+TGG | 0.483429 | 6_2:-60419784 | Msa0922190:CDS |
| CTGAAACATCAGGCAACTAC+AGG | 0.485303 | 6_2:-60419183 | Msa0922190:CDS |
| TTTAGATATTGTAGTTGGGA+TGG | 0.486564 | 6_2:+60420764 | None:intergenic |
| CAGAAGCCTTGAAGCGGCCA+CGG | 0.489696 | 6_2:-60420807 | Msa0922190:CDS |
| CCTCGAGGCCTTCGTGTCGA+GGG | 0.494196 | 6_2:+60419938 | None:intergenic |
| ACCTCGAGGCCTTCGTGTCG+AGG | 0.495564 | 6_2:+60419937 | None:intergenic |
| CACATCTGGGGATCATCAAA+AGG | 0.499826 | 6_2:-60420687 | Msa0922190:intron |
| TTTGTATTCTTGTTGGAGGT+AGG | 0.504801 | 6_2:+60421152 | None:intergenic |
| TTGCTTTGTATTCTTGTTGG+AGG | 0.507782 | 6_2:+60421148 | None:intergenic |
| TAATGATAGCACACTCATAA+GGG | 0.514286 | 6_2:-60419296 | Msa0922190:CDS |
| GCAAAGGTTCTGTACAAAGC+GGG | 0.515818 | 6_2:-60419889 | Msa0922190:CDS |
| GCAGTTCACTCTGAAACATC+AGG | 0.517462 | 6_2:-60419193 | Msa0922190:CDS |
| CATTAGGAAGTCGCTGATTG+TGG | 0.519054 | 6_2:-60420831 | Msa0922190:CDS |
| GTTTGGCGTTTATCTCGAGC+AGG | 0.521590 | 6_2:-60420723 | Msa0922190:CDS |
| CTAGGAGAAGGAGGAATTGG+AGG | 0.521648 | 6_2:+60423000 | None:intergenic |
| AAATTGAATTAAACACATCT+GGG | 0.527383 | 6_2:-60420700 | Msa0922190:CDS |
| ATCGGGACACGCCTAATTCG+AGG | 0.530743 | 6_2:-60418926 | Msa0922190:three_prime_UTR |
| GGCAGTAAAGAATGAAGCAT+CGG | 0.533124 | 6_2:-60419666 | Msa0922190:CDS |
| TAATAGAGAAATTGCTCAGA+AGG | 0.534927 | 6_2:-60419914 | Msa0922190:CDS |
| AACTTGTTAAGATCTTGCTT+AGG | 0.543199 | 6_2:-60419972 | Msa0922190:CDS |
| AGTTGCATGGCATCATCTCT+AGG | 0.543315 | 6_2:+60422982 | None:intergenic |
| CGCTTAGTTTCGGAGCTGAA+AGG | 0.547329 | 6_2:-60421102 | Msa0922190:CDS |
| AACCGATTTGTGTCTGACAT+CGG | 0.557119 | 6_2:-60418944 | Msa0922190:three_prime_UTR |
| TGTATTGCCCACCTCCTATG+TGG | 0.563567 | 6_2:-60418872 | Msa0922190:three_prime_UTR |
| GTATGGTCACTCTTTGAAGA+AGG | 0.567039 | 6_2:-60419767 | Msa0922190:intron |
| AAAAGCACGGTAAAGTTGCA+TGG | 0.576274 | 6_2:+60422969 | None:intergenic |
| AAAATGTTAGGATCTCGCTT+AGG | 0.576845 | 6_2:-60420023 | Msa0922190:CDS |
| CTCGAGGCCTTCGTGTCGAG+GGG | 0.578942 | 6_2:+60419939 | None:intergenic |
| TGCAAAGGTTCTGTACAAAG+CGG | 0.578974 | 6_2:-60419890 | Msa0922190:CDS |
| GAGGCCTTCGTGTCGAGGGG+TGG | 0.584779 | 6_2:+60419942 | None:intergenic |
| AGTACAAGCCACATAGGAGG+TGG | 0.587325 | 6_2:+60418864 | None:intergenic |
| GTGTTGTATAAGGCAATGAA+AGG | 0.599181 | 6_2:-60419328 | Msa0922190:CDS |
| CAAAGGTTCTGTACAAAGCG+GGG | 0.603623 | 6_2:-60419888 | Msa0922190:CDS |
| ATGGCATCATCTCTAGGAGA+AGG | 0.615001 | 6_2:+60422988 | None:intergenic |
| ATATGGTACCTTTAAAAGCA+CGG | 0.617291 | 6_2:+60422956 | None:intergenic |
| ATACAAAGCAACATATTCTG+AGG | 0.622438 | 6_2:-60421136 | Msa0922190:CDS |
| AATTGCTCAGAAGGATGCAA+AGG | 0.623988 | 6_2:-60419905 | Msa0922190:CDS |
| CACTACAGTACAAGCCACAT+AGG | 0.627141 | 6_2:+60418858 | None:intergenic |
| GTCATGATAATACGAACTGA+CGG | 0.635703 | 6_2:+60419792 | None:intergenic |
| TTTCTGCATCACGTGCTGCA+GGG | 0.638169 | 6_2:+60420855 | None:intergenic |
| ACGCGAACATATTACTTCCG+TGG | 0.638767 | 6_2:+60420790 | None:intergenic |
| TGTGGACAGAAGCCTTGAAG+CGG | 0.638801 | 6_2:-60420813 | Msa0922190:CDS |
| GCATCATCTCTAGGAGAAGG+AGG | 0.640486 | 6_2:+60422991 | None:intergenic |
| CCCTCGACACGAAGGCCTCG+AGG | 0.644373 | 6_2:-60419938 | Msa0922190:CDS |
| TACAGTACAAGCCACATAGG+AGG | 0.647692 | 6_2:+60418861 | None:intergenic |
| AATTGAATTAAACACATCTG+GGG | 0.666935 | 6_2:-60420699 | Msa0922190:CDS |
| CAATTTCTCTATTAACCTCG+AGG | 0.673114 | 6_2:+60419923 | None:intergenic |
| TGAAACATCAGGCAACTACA+GGG | 0.675131 | 6_2:-60419182 | Msa0922190:CDS |
| GTACAAGCCACATAGGAGGT+GGG | 0.677275 | 6_2:+60418865 | None:intergenic |
| AAAGGTTCTGTACAAAGCGG+GGG | 0.683235 | 6_2:-60419887 | Msa0922190:CDS |
| TCATAAGGGTCATTGTAACA+AGG | 0.683484 | 6_2:-60419282 | Msa0922190:CDS |
| TTAACCACCCCTCGACACGA+AGG | 0.686957 | 6_2:-60419946 | Msa0922190:CDS |
| CAGTAAAGAATGAAGCATCG+GGG | 0.745639 | 6_2:-60419664 | Msa0922190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAAATTATTACAC+AGG | + | chr6_2:60423034-60423053 | None:intergenic | 10.0% |
| !! | TTAAATAATAAGTGTATGTT+TGG | + | chr6_2:60420269-60420288 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATGGTTCAA+TGG | + | chr6_2:60420767-60420786 | None:intergenic | 15.0% |
| !! | GTACTAATTTACTTATATAA+TGG | - | chr6_2:60420958-60420977 | Msa0922190:intron | 15.0% |
| !! | CTATAATTAACTGATATTTA+AGG | - | chr6_2:60421765-60421784 | Msa0922190:intron | 15.0% |
| !! | TATAATGAGTGTTTAAAAAA+CGG | - | chr6_2:60421826-60421845 | Msa0922190:intron | 15.0% |
| !! | ATGTTTAAATGCTTAAAATT+TGG | - | chr6_2:60422950-60422969 | Msa0922190:intron | 15.0% |
| !!! | GAAACAAAGATAGTTTTAAA+AGG | + | chr6_2:60418916-60418935 | None:intergenic | 20.0% |
| !! | AGAAAGAATACGAAAAAATA+TGG | - | chr6_2:60418990-60419009 | Msa0922190:three_prime_UTR | 20.0% |
| !! | CACAACTTATTAGAAAAATA+TGG | + | chr6_2:60419091-60419110 | None:intergenic | 20.0% |
| !! | GTCAATATTCATAAATCATA+AGG | + | chr6_2:60419148-60419167 | None:intergenic | 20.0% |
| !! | TATGTTATGTCACTAAATAA+AGG | + | chr6_2:60419235-60419254 | None:intergenic | 20.0% |
| !! | CAAAATCAATTAATACATCT+GGG | + | chr6_2:60420093-60420112 | None:intergenic | 20.0% |
| !! | TCAAAATCAATTAATACATC+TGG | + | chr6_2:60420094-60420113 | None:intergenic | 20.0% |
| !!! | AAAGTAAATTGATTTCTGTT+TGG | + | chr6_2:60420313-60420332 | None:intergenic | 20.0% |
| !!! | CCAATTTTACGAAATTAATT+AGG | + | chr6_2:60420410-60420429 | None:intergenic | 20.0% |
| !! | CCTAATTAATTTCGTAAAAT+TGG | - | chr6_2:60420407-60420426 | Msa0922190:intron | 20.0% |
| !! | AATAGTAGTTATAAAGTTAG+GGG | + | chr6_2:60420623-60420642 | None:intergenic | 20.0% |
| !! | GAATAGTAGTTATAAAGTTA+GGG | + | chr6_2:60420624-60420643 | None:intergenic | 20.0% |
| !! | TGAATAGTAGTTATAAAGTT+AGG | + | chr6_2:60420625-60420644 | None:intergenic | 20.0% |
| !!! | ATTTGTAATGATTTTGGTAT+AGG | + | chr6_2:60420648-60420667 | None:intergenic | 20.0% |
| !! | ATACCAAAATCATTACAAAT+TGG | - | chr6_2:60420648-60420667 | Msa0922190:intron | 20.0% |
| !! | AAATTGAATTAAACACATCT+GGG | - | chr6_2:60421327-60421346 | Msa0922190:intron | 20.0% |
| !!! | ATTTTTTGTAAAGGTAGTTT+TGG | + | chr6_2:60421687-60421706 | None:intergenic | 20.0% |
| !! | ATCAGTTAATTATAGCAATT+TGG | + | chr6_2:60421760-60421779 | None:intergenic | 20.0% |
| !! | TTTCATACTGAATTAATATC+AGG | - | chr6_2:60422340-60422359 | Msa0922190:intron | 20.0% |
| !!! | AATATACAAATTTTGCGTAA+TGG | + | chr6_2:60422658-60422677 | None:intergenic | 20.0% |
| !!! | GCTTATGACATTTTTTCATA+AGG | - | chr6_2:60419291-60419310 | Msa0922190:CDS | 25.0% |
| !!! | TTCTTTAAGATAGCTATGTA+AGG | - | chr6_2:60419337-60419356 | Msa0922190:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr6_2:60419487-60419506 | Msa0922190:intron | 25.0% |
| !! | TTTGACTATAAGTAAGTTGA+AGG | - | chr6_2:60419647-60419666 | Msa0922190:CDS | 25.0% |
| !! | TTGACTATAAGTAAGTTGAA+GGG | - | chr6_2:60419648-60419667 | Msa0922190:CDS | 25.0% |
| ! | TTCTCATAATAGCTTATGTA+AGG | - | chr6_2:60419791-60419810 | Msa0922190:CDS | 25.0% |
| ! | ATGGAATCAAACATATACTA+GGG | + | chr6_2:60419889-60419908 | None:intergenic | 25.0% |
| ! | AATGGAATCAAACATATACT+AGG | + | chr6_2:60419890-60419909 | None:intergenic | 25.0% |
| !! | GTATATGTTTGATTCCATTT+TGG | - | chr6_2:60419891-60419910 | Msa0922190:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr6_2:60419487-60419506 | Msa0922190:intron | 25.0% |
| !!! | TTTGTCGTTAGATTTTAACT+TGG | + | chr6_2:60420064-60420083 | None:intergenic | 25.0% |
| ! | TGCATAAGTATCAATTATAG+AGG | - | chr6_2:60420160-60420179 | Msa0922190:intron | 25.0% |
| ! | TTTCGTAAAATTGGATTGTA+AGG | - | chr6_2:60420416-60420435 | Msa0922190:intron | 25.0% |
| !! | GTTCCAATTTGTAATGATTT+TGG | + | chr6_2:60420654-60420673 | None:intergenic | 25.0% |
| !! | TTATAATTTTGTGCTTTCAC+AGG | - | chr6_2:60420790-60420809 | Msa0922190:CDS | 25.0% |
| !!! | CTGTTTTAGATATTGTAGTT+GGG | + | chr6_2:60421270-60421289 | None:intergenic | 25.0% |
| !!! | ACTGTTTTAGATATTGTAGT+TGG | + | chr6_2:60421271-60421290 | None:intergenic | 25.0% |
| ! | GAAATTGAATTAAACACATC+TGG | - | chr6_2:60421326-60421345 | Msa0922190:intron | 25.0% |
| ! | AATTGAATTAAACACATCTG+GGG | - | chr6_2:60421328-60421347 | Msa0922190:intron | 25.0% |
| !!! | ATTGTTTTATGATCCCTATA+GGG | + | chr6_2:60421419-60421438 | None:intergenic | 25.0% |
| !!! | AATTGTTTTATGATCCCTAT+AGG | + | chr6_2:60421420-60421439 | None:intergenic | 25.0% |
| ! | ATCACAAATTAGTCACATTA+AGG | - | chr6_2:60421499-60421518 | Msa0922190:intron | 25.0% |
| ! | TCACAAATTAGTCACATTAA+GGG | - | chr6_2:60421500-60421519 | Msa0922190:intron | 25.0% |
| ! | GAACTATGAAAAATCCTAAA+AGG | + | chr6_2:60421530-60421549 | None:intergenic | 25.0% |
| ! | TGTAACATATCAGTTTGATT+TGG | + | chr6_2:60421568-60421587 | None:intergenic | 25.0% |
| !!! | ACGGTTTAGATTTTTTGTAA+AGG | + | chr6_2:60421696-60421715 | None:intergenic | 25.0% |
| !!! | ATTTGAGTTGAATCAGTTTT+TGG | + | chr6_2:60421807-60421826 | None:intergenic | 25.0% |
| !!! | ACAGTATGATTTTTTCATAG+CGG | - | chr6_2:60421871-60421890 | Msa0922190:intron | 25.0% |
| ! | CTTTCTAGATTCAAAATGTT+AGG | - | chr6_2:60421992-60422011 | Msa0922190:intron | 25.0% |
| !!! | AACAAGTTTTTTGCATAAAG+CGG | + | chr6_2:60422043-60422062 | None:intergenic | 25.0% |
| ! | TTAGGAAAAATACTTCCTTT+AGG | - | chr6_2:60422477-60422496 | Msa0922190:intron | 25.0% |
| ! | TAGGAAAAATACTTCCTTTA+GGG | - | chr6_2:60422478-60422497 | Msa0922190:intron | 25.0% |
| !! | TTGCATTTGAGTTTCAATTA+GGG | - | chr6_2:60423007-60423026 | Msa0922190:CDS | 25.0% |
| ! | ATATGGTACCTTTAAAAGCA+CGG | + | chr6_2:60419074-60419093 | None:intergenic | 30.0% |
| !!! | AACTTGTTTTAGACCATGTT+TGG | - | chr6_2:60419196-60419215 | Msa0922190:CDS | 30.0% |
| CAAATAAGTCAATCCAAACA+TGG | + | chr6_2:60419212-60419231 | None:intergenic | 30.0% | |
| GTATATGTTTGATTCCACTT+TGG | - | chr6_2:60419437-60419456 | Msa0922190:intron | 30.0% | |
| ! | CAGACTATTCTAATTTCTAG+TGG | + | chr6_2:60419566-60419585 | None:intergenic | 30.0% |
| CACTAGAAATTAGAATAGTC+TGG | - | chr6_2:60419564-60419583 | Msa0922190:intron | 30.0% | |
| ! | CAGCAATTTAGCTTATGATT+TGG | - | chr6_2:60419749-60419768 | Msa0922190:intron | 30.0% |
| TGGAATCAAACATATACTAG+GGG | + | chr6_2:60419888-60419907 | None:intergenic | 30.0% | |
| ! | TATGTTTGATTCCATTTTGG+AGG | - | chr6_2:60419894-60419913 | Msa0922190:CDS | 30.0% |
| ! | CATTTTGTATTCCTCCAAAA+TGG | + | chr6_2:60419908-60419927 | None:intergenic | 30.0% |
| GGAATACAAAATGATTCTAG+AGG | - | chr6_2:60419915-60419934 | Msa0922190:CDS | 30.0% | |
| !! | TCTAGAATTGACTTTTAGTC+TGG | + | chr6_2:60420018-60420037 | None:intergenic | 30.0% |
| AGACTAAAAGTCAATTCTAG+AGG | - | chr6_2:60420017-60420036 | Msa0922190:CDS | 30.0% | |
| TGATACTTATGCATAAAGCT+AGG | + | chr6_2:60420153-60420172 | None:intergenic | 30.0% | |
| !! | AACACGTCTAGAATCAATTT+TGG | - | chr6_2:60420226-60420245 | Msa0922190:intron | 30.0% |
| GAGTTTATCATAGACTATCT+GGG | + | chr6_2:60420541-60420560 | None:intergenic | 30.0% | |
| AGAGTTTATCATAGACTATC+TGG | + | chr6_2:60420542-60420561 | None:intergenic | 30.0% | |
| !!! | CAGTTTTGTTAGATCAAGTT+TGG | + | chr6_2:60420581-60420600 | None:intergenic | 30.0% |
| AGTGTATTGTGATATCTGAA+TGG | - | chr6_2:60420707-60420726 | Msa0922190:CDS | 30.0% | |
| !! | ATGTTGCTTTGTATTCTTGT+TGG | + | chr6_2:60420885-60420904 | None:intergenic | 30.0% |
| ATACAAAGCAACATATTCTG+AGG | - | chr6_2:60420891-60420910 | Msa0922190:intron | 30.0% | |
| TTTAGATATTGTAGTTGGGA+TGG | + | chr6_2:60421266-60421285 | None:intergenic | 30.0% | |
| CAGTTATACCATTCAAAGTT+TGG | - | chr6_2:60421287-60421306 | Msa0922190:intron | 30.0% | |
| AACTTCATGCTCAACATAAA+CGG | + | chr6_2:60421387-60421406 | None:intergenic | 30.0% | |
| AAGTTGAATGAAATCCCTAT+AGG | - | chr6_2:60421402-60421421 | Msa0922190:intron | 30.0% | |
| AGTTGAATGAAATCCCTATA+GGG | - | chr6_2:60421403-60421422 | Msa0922190:intron | 30.0% | |
| AATTTGTGATGTGATAGCTA+TGG | + | chr6_2:60421489-60421508 | None:intergenic | 30.0% | |
| CTATGAAAAATCCTAAAAGG+AGG | + | chr6_2:60421527-60421546 | None:intergenic | 30.0% | |
| ! | GATTTTTCATAGTTCGATTC+AGG | - | chr6_2:60421535-60421554 | Msa0922190:intron | 30.0% |
| AAACTGAACTGCATTGTTTA+CGG | - | chr6_2:60421600-60421619 | Msa0922190:intron | 30.0% | |
| !! | AACTTGTTAAGATCTTGCTT+AGG | - | chr6_2:60422055-60422074 | Msa0922190:intron | 30.0% |
| TAATAGAGAAATTGCTCAGA+AGG | - | chr6_2:60422113-60422132 | Msa0922190:intron | 30.0% | |
| ! | TTGGACAAATGTCTTTTCAT+CGG | + | chr6_2:60422181-60422200 | None:intergenic | 30.0% |
| TCGTATTATCATGACATGTA+TGG | - | chr6_2:60422243-60422262 | Msa0922190:intron | 30.0% | |
| TTCATCTTCACTTCAACTTT+AGG | - | chr6_2:60422459-60422478 | Msa0922190:intron | 30.0% | |
| AGGAAAAATACTTCCTTTAG+GGG | - | chr6_2:60422479-60422498 | Msa0922190:intron | 30.0% | |
| TATAAGGCAATGAAAGGTTT+AGG | - | chr6_2:60422705-60422724 | Msa0922190:intron | 30.0% | |
| ATAAGGCAATGAAAGGTTTA+GGG | - | chr6_2:60422706-60422725 | Msa0922190:intron | 30.0% | |
| TAATGATAGCACACTCATAA+GGG | - | chr6_2:60422731-60422750 | Msa0922190:intron | 30.0% | |
| AACATCTTTGACTAGTGATT+CGG | + | chr6_2:60422894-60422913 | None:intergenic | 30.0% | |
| TGTTCAATCATGTTTCGTTT+CGG | - | chr6_2:60422910-60422929 | Msa0922190:intron | 30.0% | |
| ! | CTTGCATTTGAGTTTCAATT+AGG | - | chr6_2:60423006-60423025 | Msa0922190:CDS | 30.0% |
| ! | CAACTTTACCGTGCTTTTAA+AGG | - | chr6_2:60419063-60419082 | Msa0922190:three_prime_UTR | 35.0% |
| TATGTTTGATTCCACTTTGG+AGG | - | chr6_2:60419440-60419459 | Msa0922190:intron | 35.0% | |
| GGAATCAAAAGTGATTCTAG+AGG | - | chr6_2:60419461-60419480 | Msa0922190:intron | 35.0% | |
| ! | TCTGGAATTGAGTATATTCG+CGG | - | chr6_2:60419582-60419601 | Msa0922190:intron | 35.0% |
| GTATATTCGCGGACAAAAAT+TGG | - | chr6_2:60419593-60419612 | Msa0922190:intron | 35.0% | |
| GTTGAAGGGAAAACAATTTG+TGG | - | chr6_2:60419662-60419681 | Msa0922190:CDS | 35.0% | |
| AAGGGAAAACAATTTGTGGT+TGG | - | chr6_2:60419666-60419685 | Msa0922190:CDS | 35.0% | |
| !!! | AATTTTGGCTCATCCAAAAG+TGG | - | chr6_2:60420241-60420260 | Msa0922190:intron | 35.0% |
| !! | TGTATGTTTGGTTCCACTTT+TGG | + | chr6_2:60420257-60420276 | None:intergenic | 35.0% |
| TGAATAATGGTTAGAAGCGA+CGG | + | chr6_2:60420452-60420471 | None:intergenic | 35.0% | |
| AAGGAAGGTGATCTGAATAA+TGG | + | chr6_2:60420465-60420484 | None:intergenic | 35.0% | |
| ! | AAAACTGACTTCAGATGTGA+GGG | - | chr6_2:60420594-60420613 | Msa0922190:intron | 35.0% |
| ! | TTTTGTGCTTTCACAGGATT+TGG | - | chr6_2:60420796-60420815 | Msa0922190:CDS | 35.0% |
| TTTGTGCTTTCACAGGATTT+GGG | - | chr6_2:60420797-60420816 | Msa0922190:CDS | 35.0% | |
| TTTGTATTCTTGTTGGAGGT+AGG | + | chr6_2:60420878-60420897 | None:intergenic | 35.0% | |
| TTGCTTTGTATTCTTGTTGG+AGG | + | chr6_2:60420882-60420901 | None:intergenic | 35.0% | |
| GATAAACGCCAAACTTTGAA+TGG | + | chr6_2:60421298-60421317 | None:intergenic | 35.0% | |
| ! | TGTTCTTGAGTGTGGATTTT+AGG | - | chr6_2:60421454-60421473 | Msa0922190:intron | 35.0% |
| TTTCATAGTTCGATTCAGGA+AGG | - | chr6_2:60421539-60421558 | Msa0922190:intron | 35.0% | |
| !!! | AAGGTAGTTTTGGTACTGTT+CGG | + | chr6_2:60421677-60421696 | None:intergenic | 35.0% |
| ! | TTTTTCATAGCGGTTCAGTT+TGG | - | chr6_2:60421881-60421900 | Msa0922190:intron | 35.0% |
| ! | CTAAAAGCATGCGCTATTAT+TGG | + | chr6_2:60421950-60421969 | None:intergenic | 35.0% |
| AAAATGTTAGGATCTCGCTT+AGG | - | chr6_2:60422004-60422023 | Msa0922190:intron | 35.0% | |
| CAATTTCTCTATTAACCTCG+AGG | + | chr6_2:60422107-60422126 | None:intergenic | 35.0% | |
| TGCTTCGTTCACTGAATATT+TGG | + | chr6_2:60422200-60422219 | None:intergenic | 35.0% | |
| GTCATGATAATACGAACTGA+CGG | + | chr6_2:60422238-60422257 | None:intergenic | 35.0% | |
| !! | TCCAGCAAAGTATTTTGCAA+AGG | - | chr6_2:60422430-60422449 | Msa0922190:intron | 35.0% |
| ACCTTTGCAAAATACTTTGC+TGG | + | chr6_2:60422434-60422453 | None:intergenic | 35.0% | |
| GGAAAAATACTTCCTTTAGG+GGG | - | chr6_2:60422480-60422499 | Msa0922190:intron | 35.0% | |
| ! | GAAAAATACTTCCTTTAGGG+GGG | - | chr6_2:60422481-60422500 | Msa0922190:intron | 35.0% |
| TATATAACCACATTTGCCTG+CGG | + | chr6_2:60422532-60422551 | None:intergenic | 35.0% | |
| GTTGTGTACGATCATAGATT+AGG | - | chr6_2:60422599-60422618 | Msa0922190:intron | 35.0% | |
| GGAAAGCTAAGACGTTTAAA+AGG | + | chr6_2:60422637-60422656 | None:intergenic | 35.0% | |
| GTGTTGTATAAGGCAATGAA+AGG | - | chr6_2:60422699-60422718 | Msa0922190:intron | 35.0% | |
| CTAATGATAGCACACTCATA+AGG | - | chr6_2:60422730-60422749 | Msa0922190:intron | 35.0% | |
| TCATAAGGGTCATTGTAACA+AGG | - | chr6_2:60422745-60422764 | Msa0922190:intron | 35.0% | |
| ! | GATTTTCTTCTCGCACTTTT+GGG | - | chr6_2:60422867-60422886 | Msa0922190:intron | 35.0% |
| ! | AAAAGCACGGTAAAGTTGCA+TGG | + | chr6_2:60419061-60419080 | None:intergenic | 40.0% |
| TGTTTATCCAAACAGTCTGC+TGG | - | chr6_2:60419415-60419434 | Msa0922190:intron | 40.0% | |
| ACATATACCAGCAGACTGTT+TGG | + | chr6_2:60419425-60419444 | None:intergenic | 40.0% | |
| !! | CACTTTTGATTCCTCCAAAG+TGG | + | chr6_2:60419454-60419473 | None:intergenic | 40.0% |
| ACATATACTAGGGGACTGTT+TGG | + | chr6_2:60419879-60419898 | None:intergenic | 40.0% | |
| AGTCTGGAAGTGAGTATGTT+TGG | + | chr6_2:60420002-60420021 | None:intergenic | 40.0% | |
| ! | TATCTAGAGCGTGACTTAGA+TGG | - | chr6_2:60420500-60420519 | Msa0922190:intron | 40.0% |
| ! | CAAAACTGACTTCAGATGTG+AGG | - | chr6_2:60420593-60420612 | Msa0922190:intron | 40.0% |
| GCTTTCGAAACGCTTAGTTT+CGG | - | chr6_2:60420915-60420934 | Msa0922190:intron | 40.0% | |
| GGAGCTGAAAGGAAAATTAG+AGG | - | chr6_2:60420936-60420955 | Msa0922190:intron | 40.0% | |
| ATCAGACTGCAGTTCTACTT+TGG | - | chr6_2:60421141-60421160 | Msa0922190:CDS | 40.0% | |
| CACGTGATGCAGAAATCATT+AGG | - | chr6_2:60421180-60421199 | Msa0922190:CDS | 40.0% | |
| !! | TCTCTTGTTGTTCTTGAGTG+TGG | - | chr6_2:60421446-60421465 | Msa0922190:intron | 40.0% |
| ! | ACATTAAGGGTCCTCCTTTT+AGG | - | chr6_2:60421513-60421532 | Msa0922190:intron | 40.0% |
| ATCTAAGCTTTACACCAGTC+TGG | + | chr6_2:60421637-60421656 | None:intergenic | 40.0% | |
| GGTGTAAAGCTTAGATGCAT+TGG | - | chr6_2:60421641-60421660 | Msa0922190:intron | 40.0% | |
| !!! | GCTTAGATGCATTGGTTTTG+TGG | - | chr6_2:60421649-60421668 | Msa0922190:intron | 40.0% |
| CAGTTCAGTTCGAAAAGCTA+CGG | + | chr6_2:60421715-60421734 | None:intergenic | 40.0% | |
| AATTGCTCAGAAGGATGCAA+AGG | - | chr6_2:60422122-60422141 | Msa0922190:intron | 40.0% | |
| TGCAAAGGTTCTGTACAAAG+CGG | - | chr6_2:60422137-60422156 | Msa0922190:intron | 40.0% | |
| ! | GTATGGTCACTCTTTGAAGA+AGG | - | chr6_2:60422260-60422279 | Msa0922190:intron | 40.0% |
| GGCAGTAAAGAATGAAGCAT+CGG | - | chr6_2:60422361-60422380 | Msa0922190:intron | 40.0% | |
| ! | GCAGTAAAGAATGAAGCATC+GGG | - | chr6_2:60422362-60422381 | Msa0922190:intron | 40.0% |
| !! | CAGTAAAGAATGAAGCATCG+GGG | - | chr6_2:60422363-60422382 | Msa0922190:intron | 40.0% |
| !! | AATGAAGCATCGGGGAATTT+CGG | - | chr6_2:60422371-60422390 | Msa0922190:intron | 40.0% |
| CAACTCTGACACGTAAACAT+CGG | + | chr6_2:60422583-60422602 | None:intergenic | 40.0% | |
| CTTATACAACACCTGCATTG+AGG | + | chr6_2:60422691-60422710 | None:intergenic | 40.0% | |
| ! | CTCAATGCAGGTGTTGTATA+AGG | - | chr6_2:60422689-60422708 | Msa0922190:intron | 40.0% |
| TGAAACATCAGGCAACTACA+GGG | - | chr6_2:60422845-60422864 | Msa0922190:intron | 40.0% | |
| ! | GGATTTTCTTCTCGCACTTT+TGG | - | chr6_2:60422866-60422885 | Msa0922190:intron | 40.0% |
| !! | AACCGATTTGTGTCTGACAT+CGG | - | chr6_2:60423083-60423102 | Msa0922190:five_prime_UTR | 40.0% |
| ! | TCTCTAGGAGAAGGAGGAAT+TGG | + | chr6_2:60419033-60419052 | None:intergenic | 45.0% |
| ! | ATGGCATCATCTCTAGGAGA+AGG | + | chr6_2:60419042-60419061 | None:intergenic | 45.0% |
| AGTTGCATGGCATCATCTCT+AGG | + | chr6_2:60419048-60419067 | None:intergenic | 45.0% | |
| !! | TAGAATTGATTTTGCGCCGC+AGG | - | chr6_2:60419975-60419994 | Msa0922190:CDS | 45.0% |
| AGTGAGTATGTTTGGTCCTG+CGG | + | chr6_2:60419994-60420013 | None:intergenic | 45.0% | |
| GATATCCACTCTTAGGCGTA+AGG | + | chr6_2:60420484-60420503 | None:intergenic | 45.0% | |
| ! | CGCTCTAGATATCCACTCTT+AGG | + | chr6_2:60420491-60420510 | None:intergenic | 45.0% |
| ! | CATTAGGAAGTCGCTGATTG+TGG | - | chr6_2:60421196-60421215 | Msa0922190:CDS | 45.0% |
| ACGCGAACATATTACTTCCG+TGG | + | chr6_2:60421240-60421259 | None:intergenic | 45.0% | |
| CACATCTGGGGATCATCAAA+AGG | - | chr6_2:60421340-60421359 | Msa0922190:intron | 45.0% | |
| GCAAAGGTTCTGTACAAAGC+GGG | - | chr6_2:60422138-60422157 | Msa0922190:intron | 45.0% | |
| CAAAGGTTCTGTACAAAGCG+GGG | - | chr6_2:60422139-60422158 | Msa0922190:intron | 45.0% | |
| AAAGGTTCTGTACAAAGCGG+GGG | - | chr6_2:60422140-60422159 | Msa0922190:intron | 45.0% | |
| ! | TCACACTTTTGCCTCAATGC+AGG | - | chr6_2:60422677-60422696 | Msa0922190:intron | 45.0% |
| !! | GCAGTTCACTCTGAAACATC+AGG | - | chr6_2:60422834-60422853 | Msa0922190:intron | 45.0% |
| CTGAAACATCAGGCAACTAC+AGG | - | chr6_2:60422844-60422863 | Msa0922190:intron | 45.0% | |
| !! | ACCGATTTGTGTCTGACATC+GGG | - | chr6_2:60423084-60423103 | Msa0922190:five_prime_UTR | 45.0% |
| TCCCGATGTCAGACACAAAT+CGG | + | chr6_2:60423088-60423107 | None:intergenic | 45.0% | |
| GCACAAACACTCCTCGAATT+AGG | + | chr6_2:60423115-60423134 | None:intergenic | 45.0% | |
| !! | TATAATGAAAAAAAAAAAAA+TGG | + | chr6_2:60420775-60420794 | None:intergenic | 5.0% |
| CTAGGAGAAGGAGGAATTGG+AGG | + | chr6_2:60419030-60419049 | None:intergenic | 50.0% | |
| ! | GCATCATCTCTAGGAGAAGG+AGG | + | chr6_2:60419039-60419058 | None:intergenic | 50.0% |
| ACCTTCCTTACGCCTAAGAG+TGG | - | chr6_2:60420476-60420495 | Msa0922190:intron | 50.0% | |
| TCCACTCTTAGGCGTAAGGA+AGG | + | chr6_2:60420480-60420499 | None:intergenic | 50.0% | |
| CGCTTAGTTTCGGAGCTGAA+AGG | - | chr6_2:60420925-60420944 | Msa0922190:intron | 50.0% | |
| TTTCTGCATCACGTGCTGCA+GGG | + | chr6_2:60421175-60421194 | None:intergenic | 50.0% | |
| ATTTCTGCATCACGTGCTGC+AGG | + | chr6_2:60421176-60421195 | None:intergenic | 50.0% | |
| TGTGGACAGAAGCCTTGAAG+CGG | - | chr6_2:60421214-60421233 | Msa0922190:CDS | 50.0% | |
| GTTTGGCGTTTATCTCGAGC+AGG | - | chr6_2:60421304-60421323 | Msa0922190:intron | 50.0% | |
| CTGGGGATCATCAAAAGGTG+AGG | - | chr6_2:60421345-60421364 | Msa0922190:intron | 50.0% | |
| GCTTTACACCAGTCTGGTCT+GGG | + | chr6_2:60421631-60421650 | None:intergenic | 50.0% | |
| AGCTTTACACCAGTCTGGTC+TGG | + | chr6_2:60421632-60421651 | None:intergenic | 50.0% | |
| AAAGCGGGGGAGAAGAAACT+GGG | - | chr6_2:60422153-60422172 | Msa0922190:intron | 50.0% | |
| TGAACGAAGCAGTGCGCATT+TGG | - | chr6_2:60422209-60422228 | Msa0922190:intron | 50.0% | |
| TGTATTGCCCACCTCCTATG+TGG | - | chr6_2:60423155-60423174 | Msa0922190:five_prime_UTR | 50.0% | |
| TTACTTCCGTGGCCGCTTCA+AGG | + | chr6_2:60421229-60421248 | None:intergenic | 55.0% | |
| TTAACCACCCCTCGACACGA+AGG | - | chr6_2:60422081-60422100 | Msa0922190:intron | 55.0% | |
| CAAAGCGGGGGAGAAGAAAC+TGG | - | chr6_2:60422152-60422171 | Msa0922190:intron | 55.0% | |
| AAGCACAGACACCCCCCTAA+AGG | + | chr6_2:60422495-60422514 | None:intergenic | 55.0% | |
| TTCATAGGATGCGATGCCGC+AGG | - | chr6_2:60422513-60422532 | Msa0922190:intron | 55.0% | |
| ATCGGGACACGCCTAATTCG+AGG | - | chr6_2:60423101-60423120 | Msa0922190:five_prime_UTR | 55.0% | |
| CAGAAGCCTTGAAGCGGCCA+CGG | - | chr6_2:60421220-60421239 | Msa0922190:intron | 60.0% | |
| !! | GGGGGGTGTCTGTGCTTCAT+AGG | - | chr6_2:60422498-60422517 | Msa0922190:intron | 60.0% |
| TGCGATGCCGCAGGCAAATG+TGG | - | chr6_2:60422522-60422541 | Msa0922190:intron | 60.0% | |
| GCATCACGTGCTGCAGGGTC+AGG | + | chr6_2:60421170-60421189 | None:intergenic | 65.0% | |
| CGGTACGTCCCAGACCAGAC+TGG | - | chr6_2:60421620-60421639 | Msa0922190:intron | 65.0% | |
| CTCGAGGCCTTCGTGTCGAG+GGG | + | chr6_2:60422091-60422110 | None:intergenic | 65.0% | |
| CCTCGAGGCCTTCGTGTCGA+GGG | + | chr6_2:60422092-60422111 | None:intergenic | 65.0% | |
| ACCTCGAGGCCTTCGTGTCG+AGG | + | chr6_2:60422093-60422112 | None:intergenic | 65.0% | |
| GAGGCCTTCGTGTCGAGGGG+TGG | + | chr6_2:60422088-60422107 | None:intergenic | 70.0% | |
| CCCTCGACACGAAGGCCTCG+AGG | - | chr6_2:60422089-60422108 | Msa0922190:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 60418871 | 60423178 | 60418871 | ID=Msa0922190;Name=Msa0922190 |
| chr6_2 | mRNA | 60418871 | 60423178 | 60418871 | ID=Msa0922190-mRNA-1;Parent=Msa0922190;Name=Msa0922190-mRNA-1;_AED=0.28;_eAED=0.28;_QI=138|0.8|0.83|1|1|1|6|276|337 |
| chr6_2 | exon | 60418871 | 60419350 | 60418871 | ID=Msa0922190-mRNA-1:exon:9273;Parent=Msa0922190-mRNA-1 |
| chr6_2 | exon | 60419598 | 60419687 | 60419598 | ID=Msa0922190-mRNA-1:exon:9272;Parent=Msa0922190-mRNA-1 |
| chr6_2 | exon | 60419768 | 60420049 | 60419768 | ID=Msa0922190-mRNA-1:exon:9271;Parent=Msa0922190-mRNA-1 |
| chr6_2 | exon | 60420688 | 60420903 | 60420688 | ID=Msa0922190-mRNA-1:exon:9270;Parent=Msa0922190-mRNA-1 |
| chr6_2 | exon | 60421092 | 60421237 | 60421092 | ID=Msa0922190-mRNA-1:exon:9269;Parent=Msa0922190-mRNA-1 |
| chr6_2 | exon | 60422965 | 60423178 | 60422965 | ID=Msa0922190-mRNA-1:exon:9268;Parent=Msa0922190-mRNA-1 |
| chr6_2 | five_prime_UTR | 60423041 | 60423178 | 60423041 | ID=Msa0922190-mRNA-1:five_prime_utr;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60422965 | 60423040 | 60422965 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60421092 | 60421237 | 60421092 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60420688 | 60420903 | 60420688 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60419768 | 60420049 | 60419768 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60419598 | 60419687 | 60419598 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | CDS | 60419147 | 60419350 | 60419147 | ID=Msa0922190-mRNA-1:cds;Parent=Msa0922190-mRNA-1 |
| chr6_2 | three_prime_UTR | 60418871 | 60419146 | 60418871 | ID=Msa0922190-mRNA-1:three_prime_utr;Parent=Msa0922190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
