AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212130 MtrunA17_Chr4g0060931 97.778 360 7 1 1 360 1 359 0.0 733
Msa1212130 MtrunA17_Chr3g0091921 68.750 320 81 7 1 319 1 302 1.54e-144 411
Msa1212130 MtrunA17_Chr6g0453451 62.295 244 81 4 12 248 15 254 2.86e-104 309
Msa1212130 MtrunA17_Chr7g0253011 46.819 393 166 14 1 360 1 383 2.19e-98 296
Msa1212130 MtrunA17_Chr6g0461661 49.858 353 151 11 2 333 3 350 2.71e-98 296
Msa1212130 MtrunA17_Chr6g0484441 67.337 199 52 4 16 205 4 198 1.10e-89 272
Msa1212130 MtrunA17_Chr2g0316971 79.618 157 30 1 17 171 23 179 5.47e-89 272
Msa1212130 MtrunA17_Chr7g0217721 51.661 271 109 4 11 259 13 283 5.26e-82 253
Msa1212130 MtrunA17_Chr3g0139331 71.069 159 40 2 17 173 11 165 1.16e-78 244
Msa1212130 MtrunA17_Chr1g0147421 66.286 175 51 4 2 173 13 182 2.72e-78 244
Msa1212130 MtrunA17_Chr7g0217711 73.510 151 38 2 2 151 5 154 5.96e-73 224
Msa1212130 MtrunA17_Chr2g0312321 46.816 267 113 9 1 264 1 241 1.08e-67 215
Msa1212130 MtrunA17_Chr3g0144271 60.119 168 60 5 2 164 7 172 2.52e-61 202
Msa1212130 MtrunA17_Chr3g0113001 43.706 286 140 7 62 340 10 281 8.76e-61 197
Msa1212130 MtrunA17_Chr1g0183741 48.691 191 82 4 17 205 10 186 3.02e-59 192
Msa1212130 MtrunA17_Chr4g0056541 60.000 155 53 3 17 167 7 156 7.49e-59 194
Msa1212130 MtrunA17_Chr8g0359921 55.625 160 71 0 14 173 11 170 9.30e-59 193
Msa1212130 MtrunA17_Chr4g0018391 57.792 154 58 3 17 167 7 156 9.72e-59 193
Msa1212130 MtrunA17_Chr5g0417791 54.375 160 71 1 15 172 1 160 2.87e-58 189
Msa1212130 MtrunA17_Chr5g0405211 52.047 171 75 3 17 184 8 174 2.92e-58 192
Msa1212130 MtrunA17_Chr2g0318101 40.449 267 128 9 13 259 11 266 4.71e-58 192
Msa1212130 MtrunA17_Chr4g0017921 57.143 168 58 3 17 175 8 170 4.82e-58 192
Msa1212130 MtrunA17_Chr5g0398971 56.962 158 61 3 17 170 7 161 6.00e-58 191
Msa1212130 MtrunA17_Chr4g0042561 46.465 198 95 3 16 211 8 196 6.93e-58 189
Msa1212130 MtrunA17_Chr8g0372121 53.503 157 66 3 17 170 6 158 9.95e-58 189
Msa1212130 MtrunA17_Chr2g0318081 53.293 167 76 1 14 180 13 177 1.73e-57 190
Msa1212130 MtrunA17_Chr7g0252971 52.663 169 69 3 14 171 5 173 5.68e-57 189
Msa1212130 MtrunA17_Chr8g0346001 48.969 194 76 5 2 175 3 193 9.21e-57 191
Msa1212130 MtrunA17_Chr7g0263931 57.595 158 63 3 14 167 8 165 9.87e-57 187
Msa1212130 MtrunA17_Chr2g0309891 55.000 160 61 3 15 168 4 158 1.77e-56 187
Msa1212130 MtrunA17_Chr3g0124761 54.037 161 72 2 14 173 4 163 5.08e-56 184
Msa1212130 MtrunA17_Chr2g0309331 52.761 163 69 3 14 172 7 165 7.98e-56 186
Msa1212130 MtrunA17_Chr7g0261411 55.263 152 60 3 17 166 10 155 8.22e-56 184
Msa1212130 MtrunA17_Chr1g0200561 51.875 160 70 3 17 173 19 174 2.19e-54 182
Msa1212130 MtrunA17_Chr4g0047841 49.153 177 67 3 17 170 15 191 2.95e-54 182
Msa1212130 MtrunA17_Chr8g0384721 53.659 164 67 3 15 173 5 164 6.40e-54 179
Msa1212130 MtrunA17_Chr3g0109821 54.430 158 69 2 15 170 4 160 1.10e-53 187
Msa1212130 MtrunA17_Chr7g0214071 48.936 188 85 5 10 193 8 188 1.94e-53 177
Msa1212130 MtrunA17_Chr6g0481091 53.595 153 67 2 17 167 6 156 3.63e-53 176
Msa1212130 MtrunA17_Chr8g0361731 45.361 194 84 3 19 203 16 196 4.75e-53 180
Msa1212130 MtrunA17_Chr3g0130731 49.432 176 75 3 14 182 4 172 9.78e-53 176
Msa1212130 MtrunA17_Chr5g0433781 53.165 158 70 3 15 170 4 159 2.58e-52 183
Msa1212130 MtrunA17_Chr6g0453131 49.693 163 74 2 16 170 14 176 9.98e-52 176
Msa1212130 MtrunA17_Chr5g0417001 49.153 177 76 4 13 177 8 182 9.98e-52 176
Msa1212130 MtrunA17_Chr2g0326361 51.875 160 63 3 17 167 14 168 2.81e-50 171
Msa1212130 MtrunA17_Chr5g0400461 45.078 193 83 4 17 191 6 193 3.29e-50 171
Msa1212130 MtrunA17_Chr3g0130101 51.592 157 72 2 19 173 9 163 4.70e-50 171
Msa1212130 MtrunA17_Chr4g0054791 47.674 172 83 3 13 179 2 171 5.14e-49 167
Msa1212130 MtrunA17_Chr3g0128151 54.902 153 65 2 17 167 22 172 1.00e-48 172
Msa1212130 MtrunA17_Chr1g0197361 48.913 184 81 6 19 195 10 187 1.74e-48 172
Msa1212130 MtrunA17_Chr5g0428991 52.663 169 69 4 2 167 15 175 2.31e-48 172
Msa1212130 MtrunA17_Chr3g0092671 52.174 161 65 5 19 173 7 161 1.01e-46 166
Msa1212130 MtrunA17_Chr8g0364791 47.799 159 79 2 17 173 6 162 3.21e-46 163
Msa1212130 MtrunA17_Chr3g0113031 39.863 291 146 11 78 360 1 270 3.44e-46 158
Msa1212130 MtrunA17_Chr3g0128111 52.288 153 65 3 20 168 45 193 4.77e-46 157
Msa1212130 MtrunA17_Chr5g0442771 36.268 284 149 10 4 266 3 275 5.37e-46 159
Msa1212130 MtrunA17_Chr4g0076731 49.080 163 70 4 19 177 56 209 1.65e-45 161
Msa1212130 MtrunA17_Chr1g0201021 47.853 163 81 2 13 173 15 175 2.17e-45 163
Msa1212130 MtrunA17_Chr1g0197351 50.932 161 73 2 17 171 42 202 2.25e-45 162
Msa1212130 MtrunA17_Chr8g0384201 45.912 159 82 2 17 173 6 162 9.88e-45 160
Msa1212130 MtrunA17_Chr4g0038751 44.000 175 83 5 1 172 4 166 3.22e-43 151
Msa1212130 MtrunA17_Chr2g0311651 42.328 189 90 5 1 174 9 193 6.76e-43 151
Msa1212130 MtrunA17_Chr2g0311661 42.775 173 84 4 16 173 19 191 6.23e-42 148
Msa1212130 MtrunA17_Chr8g0385991 42.500 160 85 3 17 171 14 171 4.04e-39 139
Msa1212130 MtrunA17_Chr8g0345671 46.012 163 75 7 7 164 1 155 1.36e-37 139
Msa1212130 MtrunA17_Chr3g0131911 42.138 159 82 4 17 167 14 170 2.47e-37 134
Msa1212130 MtrunA17_Chr8g0345691 44.805 154 72 7 17 165 12 157 1.53e-33 128
Msa1212130 MtrunA17_Chr2g0321741 36.723 177 91 4 37 211 12 169 1.29e-32 125
Msa1212130 MtrunA17_Chr2g0321631 37.975 158 90 4 16 165 3 160 4.64e-32 120
Msa1212130 MtrunA17_Chr4g0026141 40.881 159 81 5 17 165 5 160 5.91e-32 120
Msa1212130 MtrunA17_Chr8g0345711 39.264 163 84 6 17 165 12 173 1.50e-30 114
Msa1212130 MtrunA17_Chr7g0266701 39.024 164 88 6 16 168 3 165 1.18e-29 114
Msa1212130 MtrunA17_Chr4g0050701 35.359 181 93 4 17 191 11 173 1.22e-29 112
Msa1212130 MtrunA17_Chr8g0345701 47.222 144 54 7 17 141 7 147 1.15e-28 109
Msa1212130 MtrunA17_Chr8g0345731 43.939 132 67 5 17 141 24 155 1.35e-27 106
Msa1212130 MtrunA17_Chr8g0384351 39.735 151 69 5 17 167 10 138 3.34e-25 100
Msa1212130 MtrunA17_Chr8g0345721 36.129 155 64 5 20 140 38 191 6.49e-24 97.8
Msa1212130 MtrunA17_Chr3g0130321 38.690 168 79 8 13 166 3 160 2.23e-23 96.3
Msa1212130 MtrunA17_Chr7g0243371 53.333 75 33 1 70 142 17 91 3.49e-22 90.5
Msa1212130 MtrunA17_Chr8g0345741 39.496 119 66 5 28 141 2 119 1.12e-20 87.4
Msa1212130 MtrunA17_Chr3g0113011 67.925 53 17 0 11 63 13 65 2.08e-19 81.6
Msa1212130 MtrunA17_Chr3g0113041 64.151 53 19 0 11 63 13 65 1.13e-17 76.6
Msa1212130 MtrunA17_Chr7g0251661 32.308 130 82 5 14 140 7 133 3.88e-17 77.8
Msa1212130 MtrunA17_Chr7g0251651 31.818 132 84 5 12 140 13 141 2.20e-15 73.9
Msa1212130 MtrunA17_Chr7g0251671 30.147 136 85 5 16 146 9 139 6.22e-15 72.0
Msa1212130 MtrunA17_Chr2g0324961 33.793 145 73 6 17 142 49 189 3.62e-12 66.2
Msa1212130 MtrunA17_Chr8g0389661 29.775 178 93 7 15 168 45 214 3.76e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212130 AT5G61430.1 60.282 355 110 11 10 360 9 336 3.50e-145 414
Msa1212130 AT5G07680.1 56.474 363 121 13 1 360 1 329 2.32e-131 379
Msa1212130 AT5G07680.2 57.349 347 115 13 15 360 1 315 1.97e-127 368
Msa1212130 AT5G61430.2 56.856 299 98 11 66 360 2 273 2.00e-106 313
Msa1212130 AT5G39610.1 70.755 212 56 2 10 221 13 218 2.05e-104 308
Msa1212130 AT5G18270.2 46.032 378 139 10 1 360 5 335 1.62e-99 298
Msa1212130 AT5G18270.1 45.767 378 140 10 1 360 5 335 5.19e-99 296
Msa1212130 AT3G29035.1 74.479 192 35 2 10 201 17 194 1.15e-98 295
Msa1212130 AT3G04060.1 46.246 333 144 3 4 331 7 309 1.02e-92 281
Msa1212130 AT3G15170.1 63.551 214 66 4 11 221 15 219 6.56e-89 270
Msa1212130 AT5G53950.1 76.074 163 37 1 17 177 17 179 1.84e-88 271
Msa1212130 AT3G18400.1 57.511 233 86 5 16 244 4 227 5.36e-85 260
Msa1212130 AT2G24430.2 69.277 166 44 3 10 173 11 171 6.85e-79 244
Msa1212130 AT2G24430.1 69.277 166 44 3 10 173 11 171 6.85e-79 244
Msa1212130 AT1G76420.1 64.671 167 54 2 4 168 9 172 3.41e-72 228
Msa1212130 AT3G12977.1 47.945 219 102 4 16 233 17 224 1.06e-68 217
Msa1212130 AT1G56010.2 41.176 289 133 10 17 291 19 284 1.19e-64 208
Msa1212130 AT4G27410.2 54.217 166 74 1 14 179 11 174 1.47e-60 197
Msa1212130 AT3G04070.2 55.294 170 66 3 11 170 4 173 8.65e-60 196
Msa1212130 AT1G12260.2 58.228 158 59 3 17 171 7 160 2.35e-59 195
Msa1212130 AT2G18060.3 54.601 163 67 3 13 172 5 163 2.83e-59 196
Msa1212130 AT2G18060.1 54.601 163 67 3 13 172 5 163 2.83e-59 196
Msa1212130 AT1G12260.1 58.228 158 59 3 17 171 7 160 3.99e-59 196
Msa1212130 AT4G10350.1 58.974 156 55 3 17 167 9 160 1.58e-58 193
Msa1212130 AT1G62700.1 58.861 158 58 3 17 171 7 160 1.80e-58 194
Msa1212130 AT1G62700.2 58.861 158 58 3 17 171 7 160 1.80e-58 194
Msa1212130 AT4G36160.1 55.346 159 64 3 12 167 5 159 5.72e-58 192
Msa1212130 AT4G36160.3 55.346 159 64 3 12 167 5 159 5.72e-58 192
Msa1212130 AT4G36160.2 55.346 159 64 3 12 167 9 163 7.35e-58 192
Msa1212130 AT3G04070.1 50.538 186 66 3 11 170 4 189 3.20e-57 190
Msa1212130 AT5G04410.1 58.385 161 59 3 17 173 9 165 5.99e-57 194
Msa1212130 AT1G33280.1 57.143 154 58 3 17 167 8 156 9.46e-57 187
Msa1212130 AT2G46770.1 52.941 170 66 4 17 172 16 185 1.33e-56 189
Msa1212130 AT1G71930.2 53.247 154 65 2 17 167 9 158 1.55e-56 187
Msa1212130 AT1G71930.1 53.247 154 65 2 17 167 9 158 1.55e-56 187
Msa1212130 AT5G62380.2 57.143 154 59 3 17 167 7 156 1.70e-56 188
Msa1212130 AT5G62380.1 57.143 154 59 3 17 167 7 156 1.70e-56 188
Msa1212130 AT3G10500.1 55.901 161 63 3 17 173 9 165 2.54e-56 192
Msa1212130 AT1G61110.1 50.543 184 72 3 17 185 16 195 3.39e-56 186
Msa1212130 AT4G27410.3 49.180 183 74 2 14 179 11 191 3.65e-56 186
Msa1212130 AT1G69490.1 55.063 158 69 1 17 172 9 166 6.97e-56 184
Msa1212130 AT1G01720.1 53.614 166 68 3 13 173 3 164 2.42e-55 183
Msa1212130 AT3G15500.1 51.497 167 79 1 14 180 11 175 3.69e-55 184
Msa1212130 AT5G66300.1 50.307 163 75 2 11 170 6 165 3.75e-55 182
Msa1212130 AT1G52890.1 52.000 175 81 2 14 187 11 183 4.77e-55 183
Msa1212130 AT3G61910.1 49.412 170 72 2 17 172 11 180 1.28e-54 182
Msa1212130 AT1G33060.1 56.129 155 64 2 17 169 24 176 1.30e-54 190
Msa1212130 AT1G33060.2 56.129 155 64 2 17 169 24 176 1.30e-54 190
Msa1212130 AT4G35580.1 56.863 153 62 2 17 167 9 159 2.50e-54 186
Msa1212130 AT3G17730.1 54.248 153 66 2 17 167 6 156 2.52e-54 179
Msa1212130 AT4G35580.3 56.863 153 62 2 17 167 9 159 2.66e-54 187
Msa1212130 AT4G35580.2 56.863 153 62 2 17 167 9 159 3.40e-54 187
Msa1212130 AT5G08790.1 53.374 163 72 2 14 173 4 165 1.77e-53 178
Msa1212130 AT1G32770.1 47.500 200 93 4 17 205 16 214 2.45e-53 180
Msa1212130 AT1G65910.1 52.174 161 73 2 15 173 4 162 4.83e-53 185
Msa1212130 AT1G77450.1 52.121 165 77 2 10 173 3 166 5.47e-53 176
Msa1212130 AT5G46590.1 52.410 166 75 3 17 179 6 170 7.92e-53 177
Msa1212130 AT3G10490.1 53.503 157 70 2 17 171 27 182 9.86e-53 175
Msa1212130 AT3G10480.1 54.777 157 68 2 17 171 27 182 1.32e-52 181
Msa1212130 AT4G28530.1 50.888 169 59 4 17 167 10 172 2.17e-52 177
Msa1212130 AT1G26870.1 45.000 220 99 6 9 217 6 214 2.35e-52 179
Msa1212130 AT3G15510.1 39.721 287 142 10 21 291 21 292 2.96e-52 177
Msa1212130 AT5G13180.1 49.714 175 77 4 1 173 1 166 3.28e-52 174
Msa1212130 AT1G79580.3 51.176 170 69 4 14 179 14 173 4.44e-52 177
Msa1212130 AT1G79580.5 51.176 170 69 4 14 179 14 173 4.44e-52 177
Msa1212130 AT1G79580.4 51.176 170 69 4 14 179 14 173 4.44e-52 177
Msa1212130 AT1G79580.2 51.176 170 69 4 14 179 14 173 4.44e-52 177
Msa1212130 AT1G79580.1 51.176 170 69 4 14 179 14 173 4.44e-52 177
Msa1212130 AT1G54330.1 56.129 155 61 2 15 167 4 153 5.35e-52 175
Msa1212130 AT3G10480.2 55.414 157 66 2 17 171 27 181 7.48e-52 178
Msa1212130 AT3G03200.1 54.140 157 65 3 15 167 4 157 1.50e-51 178
Msa1212130 AT2G33480.2 52.663 169 67 4 1 167 1 158 2.49e-51 172
Msa1212130 AT3G10490.2 53.503 157 70 2 17 171 27 182 2.66e-51 177
Msa1212130 AT5G63790.1 50.898 167 78 2 10 173 43 208 3.29e-51 173
Msa1212130 AT5G63790.2 50.898 167 78 2 10 173 53 218 3.89e-51 173
Msa1212130 AT5G46590.2 60.465 129 48 2 17 142 6 134 8.43e-51 171
Msa1212130 AT2G33480.1 52.695 167 72 3 1 167 1 160 1.26e-50 170
Msa1212130 AT5G17260.1 53.503 157 66 3 15 167 4 157 2.00e-50 175
Msa1212130 AT5G39820.1 47.429 175 67 3 19 170 22 194 5.26e-50 171
Msa1212130 AT2G43000.1 44.444 171 93 2 7 176 7 176 6.55e-49 166
Msa1212130 AT4G17980.2 42.995 207 111 3 17 216 6 212 1.84e-48 165
Msa1212130 AT4G17980.1 42.995 207 111 3 17 216 6 212 2.38e-48 164
Msa1212130 AT5G24590.2 52.597 154 68 3 17 167 13 164 4.76e-48 168
Msa1212130 AT3G49530.2 50.292 171 71 7 2 167 3 164 3.09e-47 165
Msa1212130 AT2G02450.1 52.000 150 67 2 19 167 53 198 5.65e-47 164
Msa1212130 AT2G02450.2 52.000 150 67 2 19 167 53 198 7.30e-47 164
Msa1212130 AT3G49530.1 50.292 171 71 7 2 167 3 164 7.58e-47 166
Msa1212130 AT5G64060.1 44.785 163 84 3 14 173 3 162 1.01e-46 162
Msa1212130 AT3G10480.3 45.263 190 68 2 17 171 27 215 1.04e-46 166
Msa1212130 AT5G09330.5 34.717 265 146 8 14 271 3 247 1.75e-46 165
Msa1212130 AT5G09330.2 34.717 265 146 8 14 271 3 247 1.75e-46 165
Msa1212130 AT5G09330.4 34.717 265 146 8 14 271 3 247 1.75e-46 165
Msa1212130 AT5G09330.3 34.717 265 146 8 14 271 3 247 1.75e-46 165
Msa1212130 AT5G09330.1 34.717 265 146 8 14 271 3 247 1.75e-46 165
Msa1212130 AT1G52880.1 51.250 160 68 2 21 170 21 180 2.90e-46 160
Msa1212130 AT3G12977.2 46.746 169 78 4 66 233 14 171 4.15e-46 157
Msa1212130 AT2G27300.1 48.148 162 69 4 17 172 14 166 7.11e-46 160
Msa1212130 AT2G17040.1 47.134 157 73 3 19 172 8 157 7.90e-45 155
Msa1212130 AT1G56010.1 39.004 241 107 9 66 291 2 217 1.16e-44 154
Msa1212130 AT1G34180.3 48.408 157 77 2 19 173 18 172 2.23e-44 159
Msa1212130 AT1G34190.1 48.101 158 76 3 19 173 18 172 8.51e-44 159
Msa1212130 AT1G34180.1 48.408 157 77 2 19 173 18 172 1.03e-43 159
Msa1212130 AT1G34180.4 45.562 169 76 3 19 173 18 184 1.13e-42 154
Msa1212130 AT5G22290.1 46.939 147 69 2 19 164 23 161 1.71e-42 151
Msa1212130 AT1G34180.2 45.562 169 76 3 19 173 18 184 4.75e-42 154
Msa1212130 AT1G32510.1 40.465 215 97 7 17 218 6 202 8.06e-42 148
Msa1212130 AT3G12910.1 43.258 178 85 5 11 173 15 191 8.35e-42 148
Msa1212130 AT1G32870.2 48.466 163 80 2 13 173 6 166 2.17e-41 152
Msa1212130 AT1G32870.1 48.466 163 80 2 13 173 6 166 2.33e-41 152
Msa1212130 AT1G32870.3 48.466 163 80 2 13 173 42 202 5.04e-41 152
Msa1212130 AT3G44290.2 45.000 160 73 3 19 172 16 166 2.16e-40 142
Msa1212130 AT3G44290.1 45.000 160 73 3 19 172 16 166 4.96e-40 144
Msa1212130 AT5G04395.1 48.592 142 57 2 17 142 28 169 3.60e-37 132
Msa1212130 AT4G10350.2 57.658 111 38 3 62 167 7 113 8.96e-36 132
Msa1212130 AT4G28530.2 46.875 128 50 2 17 126 10 137 6.58e-31 119
Msa1212130 AT2G33480.3 57.143 98 40 1 70 167 8 103 3.42e-30 115
Msa1212130 AT4G01550.1 39.873 158 82 5 20 171 7 157 1.14e-28 116
Msa1212130 AT3G44350.2 38.182 165 91 5 16 172 4 165 5.28e-28 110
Msa1212130 AT5G64530.1 34.031 191 91 5 15 191 1 170 1.43e-27 107
Msa1212130 AT3G04420.2 38.854 157 85 4 15 167 1 150 2.51e-27 109
Msa1212130 AT3G04420.1 38.854 157 85 4 15 167 1 150 6.63e-27 109
Msa1212130 AT1G02230.1 38.922 167 83 7 18 177 4 158 8.70e-27 109
Msa1212130 AT5G22380.1 36.025 161 94 5 20 172 8 167 2.12e-26 105
Msa1212130 AT5G64530.2 40.769 130 63 3 15 142 1 118 2.11e-25 100
Msa1212130 AT4G01520.1 35.758 165 92 6 15 172 2 159 4.17e-25 103
Msa1212130 AT4G01540.3 36.250 160 88 6 20 172 7 159 1.18e-24 104
Msa1212130 AT4G01540.4 36.250 160 88 6 20 172 7 159 1.71e-24 103
Msa1212130 AT3G44350.1 38.776 147 80 4 16 154 4 148 1.91e-24 98.2
Msa1212130 AT4G01540.1 36.250 160 88 6 20 172 7 159 2.39e-24 103
Msa1212130 AT4G01540.2 36.250 160 88 6 20 172 7 159 2.46e-24 103
Msa1212130 AT2G18060.2 56.410 78 30 2 95 172 2 75 5.29e-24 100
Msa1212130 AT1G02220.1 40.000 130 71 3 15 140 1 127 2.51e-23 100
Msa1212130 AT3G10490.4 54.878 82 36 1 90 171 2 82 8.51e-23 98.2
Msa1212130 AT3G10490.3 54.878 82 36 1 90 171 2 82 8.51e-23 98.2
Msa1212130 AT1G02250.1 31.532 222 106 9 15 194 1 218 9.55e-23 98.2
Msa1212130 AT1G01010.1 33.491 212 105 10 20 215 6 197 6.22e-22 96.7
Msa1212130 AT2G43000.2 40.404 99 58 1 78 176 1 98 5.82e-21 89.7
Msa1212130 AT5G14000.1 35.802 162 94 4 15 173 13 167 1.12e-20 89.4
Msa1212130 AT5G14000.2 38.571 140 80 3 15 150 13 150 2.67e-20 87.0
Msa1212130 AT5G50820.1 32.941 170 84 7 15 169 15 169 1.44e-17 80.5
Msa1212130 AT5G22290.2 46.377 69 29 1 96 164 2 62 6.94e-16 76.6
Msa1212130 AT3G56530.1 30.921 152 98 3 17 165 52 199 7.39e-16 77.8
Msa1212130 AT3G55210.1 33.721 172 90 8 17 172 11 174 1.91e-15 76.3
Msa1212130 AT5G14490.4 34.266 143 76 4 17 142 55 196 1.98e-13 70.9
Msa1212130 AT5G14490.1 34.266 143 76 4 17 142 58 199 2.06e-13 70.9
Msa1212130 AT5G14490.2 34.266 143 76 4 17 142 55 196 3.13e-13 69.7
Msa1212130 AT5G14490.3 34.266 143 76 4 17 142 58 199 3.32e-13 70.5
Msa1212130 AT4G29230.2 30.460 174 88 7 17 165 47 212 2.69e-12 68.2
Msa1212130 AT3G04430.1 30.534 131 79 3 23 141 6 136 3.23e-12 65.5
Msa1212130 AT4G28500.1 34.028 144 75 5 17 142 59 200 4.08e-12 66.6
Msa1212130 AT3G56520.1 27.473 182 94 8 17 179 8 170 4.08e-12 64.7

Find 61 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCAACAACTCAATTTA+TGG 0.161606 8_1:+71986209 Msa1212130:CDS
AAGAATACCTTTGCAGCTTT+TGG 0.230826 8_1:-71985849 None:intergenic
GATTCACTTGGTAATGAATT+TGG 0.258463 8_1:+71986053 Msa1212130:CDS
CGTTTCAGTCTTATCAAATA+AGG 0.280400 8_1:+71985277 Msa1212130:CDS
GATATTGGTAGAAGGACTTT+TGG 0.286579 8_1:+71986494 Msa1212130:CDS
AAGTCATTACCTTTACAAAA+AGG 0.312749 8_1:+71985361 Msa1212130:CDS
CCATTAGAAGATGAACTTCT+TGG 0.324565 8_1:-71986266 None:intergenic
CAATATCCTAGTTCTGTTTG+TGG 0.332743 8_1:+71986326 Msa1212130:CDS
CCAAGAAGTTCATCTTCTAA+TGG 0.365852 8_1:+71986266 Msa1212130:CDS
GAGAAGATGGATTTGCCTCC+TGG 0.385429 8_1:+71985305 Msa1212130:CDS
AATCAAACAATTGAATGATT+CGG 0.401710 8_1:+71986124 Msa1212130:CDS
GCAGGGTATTGGAAAGCAAC+TGG 0.414845 8_1:+71985678 Msa1212130:CDS
AGAGACAGAAAATATCCAAC+TGG 0.424929 8_1:+71985630 Msa1212130:CDS
GAGCAACAGAAGCAGGGTAT+TGG 0.425676 8_1:+71985667 Msa1212130:CDS
ACAAACAGAGCAACAGAAGC+AGG 0.435579 8_1:+71985660 Msa1212130:CDS
TATTTCTGGTATAATGAGGT+TGG 0.436493 8_1:+71986031 Msa1212130:CDS
CATTAGAAGATGAACTTCTT+GGG 0.443626 8_1:-71986265 None:intergenic
ATCAATTGAGTTGGAGAAGC+AGG 0.451718 8_1:-71986156 None:intergenic
CTGATTCGTCGAATTCGATT+GGG 0.452226 8_1:+71986099 Msa1212130:CDS
AGAATGAATGGGTGATTTGT+AGG 0.455073 8_1:+71985973 Msa1212130:intron
CCTCAACAAGTCTGAACCTT+GGG 0.462640 8_1:+71985427 Msa1212130:CDS
AATTTCTCTGCAAGAGCCAT+TGG 0.466190 8_1:+71985395 Msa1212130:CDS
CTGTTTGTCCTCAACCCAGT+TGG 0.474621 8_1:-71985645 None:intergenic
ACTGATTCGTCGAATTCGAT+TGG 0.482670 8_1:+71986098 Msa1212130:CDS
CACATATTTCTGGTATAATG+AGG 0.489545 8_1:+71986027 Msa1212130:CDS
CTTATAAGCTCTTCATCAGT+CGG 0.490590 8_1:-71985341 None:intergenic
GATGAGTGTATCACAGGAAA+CGG 0.491856 8_1:+71986421 Msa1212130:CDS
AAATAAGGAAGATGAGAAGA+TGG 0.493958 8_1:+71985292 Msa1212130:CDS
GTCGGGTGAAATCGAAATCC+AGG 0.501638 8_1:-71985323 None:intergenic
TCAACAGCTGCAACAGAAGC+AGG 0.510943 8_1:-71986539 None:intergenic
TCTTTGAACATCAATTGAGT+TGG 0.511446 8_1:-71986165 None:intergenic
GAAAATATCCAACTGGGTTG+AGG 0.516250 8_1:+71985637 Msa1212130:CDS
ATGCATGAATATCGACTTGA+GGG 0.521465 8_1:+71985804 Msa1212130:CDS
TACTTACATGGTAAATCCCA+AGG 0.522817 8_1:-71985443 None:intergenic
ATGAATCAAAGATCCCTCCT+TGG 0.526043 8_1:-71986190 None:intergenic
CCCAAGGTTCAGACTTGTTG+AGG 0.528521 8_1:-71985427 None:intergenic
TTCAAAGGGAAATCGTTGGT+TGG 0.533657 8_1:+71985717 Msa1212130:CDS
TTCAACAACTCAATTTATGG+TGG 0.537634 8_1:+71986212 Msa1212130:CDS
TTATAAGCTCTTCATCAGTC+GGG 0.551669 8_1:-71985340 None:intergenic
TACAAAGGAAGAGCACCTAA+AGG 0.552423 8_1:+71985762 Msa1212130:CDS
ACAAATGATGAGTGTATCAC+AGG 0.560386 8_1:+71986415 Msa1212130:CDS
TAATCTTCCAAAAGCTGCAA+AGG 0.563656 8_1:+71985842 Msa1212130:CDS
TGCATACCACAAACAGAACT+AGG 0.564682 8_1:-71986332 None:intergenic
GAATGAATGGGTGATTTGTA+GGG 0.566421 8_1:+71985974 Msa1212130:intron
GCTGCAACAGAAGCAGGTGG+TGG 0.576822 8_1:-71986533 None:intergenic
ACCTCAACAAGTCTGAACCT+TGG 0.581627 8_1:+71985426 Msa1212130:CDS
CAGGGTATTGGAAAGCAACT+GGG 0.599644 8_1:+71985679 Msa1212130:CDS
TATGCATGAATATCGACTTG+AGG 0.612535 8_1:+71985803 Msa1212130:CDS
ATTGATGTTCAAAGAAACCA+AGG 0.616657 8_1:+71986173 Msa1212130:CDS
GAATTCGACGAATCAGTAAG+TGG 0.627084 8_1:-71986092 None:intergenic
GTTGAGGTCTACATCACCAA+TGG 0.634909 8_1:-71985411 None:intergenic
AGAGCTTTGTATGAAAACAA+CGG 0.644899 8_1:+71986371 Msa1212130:CDS
ATAATGAGGTTGGATTCACT+TGG 0.646475 8_1:+71986041 Msa1212130:CDS
CAAACAGAGCAACAGAAGCA+GGG 0.648037 8_1:+71985661 Msa1212130:CDS
GAGACAGAAAATATCCAACT+GGG 0.662566 8_1:+71985631 Msa1212130:CDS
ATACTCTAATAATCAAGCTG+CGG 0.664743 8_1:+71986295 Msa1212130:CDS
ATGTTCAAAGAAACCAAGGA+GGG 0.670364 8_1:+71986177 Msa1212130:CDS
TTCGACGAATCAGTAAGTGG+TGG 0.693712 8_1:-71986089 None:intergenic
ACAGCTGCAACAGAAGCAGG+TGG 0.707691 8_1:-71986536 None:intergenic
GATGTTCAAAGAAACCAAGG+AGG 0.712058 8_1:+71986176 Msa1212130:CDS
GGGTGAAATCGAAATCCAGG+AGG 0.758130 8_1:-71985320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTGTTTTGAAATTT+TGG + chr8_1:71985556-71985575 Msa1212130:intron 10.0%
!!! TTTTTTTGTTTTGAAATTTT+GGG + chr8_1:71985557-71985576 Msa1212130:intron 10.0%
!!! TTTTTTTTGTTTTGAAATTT+TGG + chr8_1:71985556-71985575 Msa1212130:intron 10.0%
!!! TTTTTTTGTTTTGAAATTTT+GGG + chr8_1:71985557-71985576 Msa1212130:intron 10.0%
!!! AAAGATAAAGAAATTTTCAA+AGG + chr8_1:71985702-71985721 Msa1212130:CDS 15.0%
!!! AAGATAAAGAAATTTTCAAA+GGG + chr8_1:71985703-71985722 Msa1212130:CDS 15.0%
!!! AAAGATAAAGAAATTTTCAA+AGG + chr8_1:71985702-71985721 Msa1212130:CDS 15.0%
!!! AAGATAAAGAAATTTTCAAA+GGG + chr8_1:71985703-71985722 Msa1212130:CDS 15.0%
!!! AATCAATAACCTTTTTGTAA+AGG - chr8_1:71985373-71985392 None:intergenic 20.0%
!! AAGATTCATATCAAATTCAA+AGG - chr8_1:71985518-71985537 None:intergenic 20.0%
!!! GTTTTAGTTAAAGCAAAAAT+GGG + chr8_1:71985579-71985598 Msa1212130:intron 20.0%
!! TAAAGGAGAAAAAAGTAATT+GGG + chr8_1:71985779-71985798 Msa1212130:CDS 20.0%
!!! ATTCAAAAGGCATAAAAAAA+TGG - chr8_1:71985920-71985939 None:intergenic 20.0%
!! AATCCAAATTCAAATTCAAA+AGG - chr8_1:71985933-71985952 None:intergenic 20.0%
!! TTTGAATTTGAATTTGGATT+TGG + chr8_1:71985933-71985952 Msa1212130:intron 20.0%
!! AATCAAACAATTGAATGATT+CGG + chr8_1:71986124-71986143 Msa1212130:CDS 20.0%
!!! AATCAATAACCTTTTTGTAA+AGG - chr8_1:71985373-71985392 None:intergenic 20.0%
!! AAGATTCATATCAAATTCAA+AGG - chr8_1:71985518-71985537 None:intergenic 20.0%
!!! GTTTTAGTTAAAGCAAAAAT+GGG + chr8_1:71985579-71985598 Msa1212130:intron 20.0%
!! TAAAGGAGAAAAAAGTAATT+GGG + chr8_1:71985779-71985798 Msa1212130:CDS 20.0%
!!! ATTCAAAAGGCATAAAAAAA+TGG - chr8_1:71985920-71985939 None:intergenic 20.0%
!! AATCCAAATTCAAATTCAAA+AGG - chr8_1:71985933-71985952 None:intergenic 20.0%
!! TTTGAATTTGAATTTGGATT+TGG + chr8_1:71985933-71985952 Msa1212130:intron 20.0%
!! AATCAAACAATTGAATGATT+CGG + chr8_1:71986124-71986143 Msa1212130:CDS 20.0%
! AAGTCATTACCTTTACAAAA+AGG + chr8_1:71985361-71985380 Msa1212130:CDS 25.0%
!!! TTTGATTGGTTTTACTTACA+TGG - chr8_1:71985458-71985477 None:intergenic 25.0%
! AAAAGGTGAAAACAAAAAGT+GGG - chr8_1:71985489-71985508 None:intergenic 25.0%
! AAAAAGGTGAAAACAAAAAG+TGG - chr8_1:71985490-71985509 None:intergenic 25.0%
! AAATTCAAAGGTGGTAAAAA+AGG - chr8_1:71985506-71985525 None:intergenic 25.0%
! ATTCATATCAAATTCAAAGG+TGG - chr8_1:71985515-71985534 None:intergenic 25.0%
!!! GGTTTTAGTTAAAGCAAAAA+TGG + chr8_1:71985578-71985597 Msa1212130:intron 25.0%
!!! AAAACTCTTGTTTTCTACAA+AGG + chr8_1:71985747-71985766 Msa1212130:CDS 25.0%
!!! CAATTACTTTTTTCTCCTTT+AGG - chr8_1:71985780-71985799 None:intergenic 25.0%
! CTAAAGGAGAAAAAAGTAAT+TGG + chr8_1:71985778-71985797 Msa1212130:CDS 25.0%
!! ATGCCTTTTGAATTTGAATT+TGG + chr8_1:71985927-71985946 Msa1212130:intron 25.0%
! TCATTCAACAACTCAATTTA+TGG + chr8_1:71986209-71986228 Msa1212130:CDS 25.0%
!!! GTTGTGTCAAATTTTGATAT+TGG + chr8_1:71986479-71986498 Msa1212130:CDS 25.0%
!!! CAAATTTTGATATTGGTAGA+AGG + chr8_1:71986486-71986505 Msa1212130:CDS 25.0%
! AAGTCATTACCTTTACAAAA+AGG + chr8_1:71985361-71985380 Msa1212130:CDS 25.0%
!!! TTTGATTGGTTTTACTTACA+TGG - chr8_1:71985458-71985477 None:intergenic 25.0%
! AAAAGGTGAAAACAAAAAGT+GGG - chr8_1:71985489-71985508 None:intergenic 25.0%
! AAAAAGGTGAAAACAAAAAG+TGG - chr8_1:71985490-71985509 None:intergenic 25.0%
! AAATTCAAAGGTGGTAAAAA+AGG - chr8_1:71985506-71985525 None:intergenic 25.0%
! ATTCATATCAAATTCAAAGG+TGG - chr8_1:71985515-71985534 None:intergenic 25.0%
!!! GGTTTTAGTTAAAGCAAAAA+TGG + chr8_1:71985578-71985597 Msa1212130:intron 25.0%
!!! AAAACTCTTGTTTTCTACAA+AGG + chr8_1:71985747-71985766 Msa1212130:CDS 25.0%
!!! CAATTACTTTTTTCTCCTTT+AGG - chr8_1:71985780-71985799 None:intergenic 25.0%
! CTAAAGGAGAAAAAAGTAAT+TGG + chr8_1:71985778-71985797 Msa1212130:CDS 25.0%
!! ATGCCTTTTGAATTTGAATT+TGG + chr8_1:71985927-71985946 Msa1212130:intron 25.0%
! TCATTCAACAACTCAATTTA+TGG + chr8_1:71986209-71986228 Msa1212130:CDS 25.0%
!!! GTTGTGTCAAATTTTGATAT+TGG + chr8_1:71986479-71986498 Msa1212130:CDS 25.0%
!!! CAAATTTTGATATTGGTAGA+AGG + chr8_1:71986486-71986505 Msa1212130:CDS 25.0%
! CGTTTCAGTCTTATCAAATA+AGG + chr8_1:71985277-71985296 Msa1212130:CDS 30.0%
AAATAAGGAAGATGAGAAGA+TGG + chr8_1:71985292-71985311 Msa1212130:CDS 30.0%
CAAAAATGGGAGAAAAAGAA+TGG + chr8_1:71985592-71985611 Msa1212130:CDS 30.0%
! AATTTTCAAAGGGAAATCGT+TGG + chr8_1:71985713-71985732 Msa1212130:CDS 30.0%
! ATTGTGTTTTGCAGAATGAA+TGG + chr8_1:71985961-71985980 Msa1212130:intron 30.0%
! TTGTGTTTTGCAGAATGAAT+GGG + chr8_1:71985962-71985981 Msa1212130:intron 30.0%
GGGAAAAAAACACATATTTC+TGG + chr8_1:71986017-71986036 Msa1212130:CDS 30.0%
!! CACATATTTCTGGTATAATG+AGG + chr8_1:71986027-71986046 Msa1212130:CDS 30.0%
!! TATTTCTGGTATAATGAGGT+TGG + chr8_1:71986031-71986050 Msa1212130:CDS 30.0%
!! GATTCACTTGGTAATGAATT+TGG + chr8_1:71986053-71986072 Msa1212130:CDS 30.0%
TCTTTGAACATCAATTGAGT+TGG - chr8_1:71986168-71986187 None:intergenic 30.0%
ATTGATGTTCAAAGAAACCA+AGG + chr8_1:71986173-71986192 Msa1212130:CDS 30.0%
TTCAACAACTCAATTTATGG+TGG + chr8_1:71986212-71986231 Msa1212130:CDS 30.0%
CATTAGAAGATGAACTTCTT+GGG - chr8_1:71986268-71986287 None:intergenic 30.0%
ATACTCTAATAATCAAGCTG+CGG + chr8_1:71986295-71986314 Msa1212130:CDS 30.0%
! AGAGCTTTGTATGAAAACAA+CGG + chr8_1:71986371-71986390 Msa1212130:CDS 30.0%
! ATATTGGTAGAAGGACTTTT+GGG + chr8_1:71986495-71986514 Msa1212130:CDS 30.0%
! TTGATTTTCATGGTACTTTG+TGG + chr8_1:71986558-71986577 Msa1212130:CDS 30.0%
! CGTTTCAGTCTTATCAAATA+AGG + chr8_1:71985277-71985296 Msa1212130:CDS 30.0%
AAATAAGGAAGATGAGAAGA+TGG + chr8_1:71985292-71985311 Msa1212130:CDS 30.0%
CAAAAATGGGAGAAAAAGAA+TGG + chr8_1:71985592-71985611 Msa1212130:CDS 30.0%
! AATTTTCAAAGGGAAATCGT+TGG + chr8_1:71985713-71985732 Msa1212130:CDS 30.0%
! ATTGTGTTTTGCAGAATGAA+TGG + chr8_1:71985961-71985980 Msa1212130:intron 30.0%
! TTGTGTTTTGCAGAATGAAT+GGG + chr8_1:71985962-71985981 Msa1212130:intron 30.0%
GGGAAAAAAACACATATTTC+TGG + chr8_1:71986017-71986036 Msa1212130:CDS 30.0%
!! CACATATTTCTGGTATAATG+AGG + chr8_1:71986027-71986046 Msa1212130:CDS 30.0%
!! TATTTCTGGTATAATGAGGT+TGG + chr8_1:71986031-71986050 Msa1212130:CDS 30.0%
!! GATTCACTTGGTAATGAATT+TGG + chr8_1:71986053-71986072 Msa1212130:CDS 30.0%
TCTTTGAACATCAATTGAGT+TGG - chr8_1:71986168-71986187 None:intergenic 30.0%
ATTGATGTTCAAAGAAACCA+AGG + chr8_1:71986173-71986192 Msa1212130:CDS 30.0%
TTCAACAACTCAATTTATGG+TGG + chr8_1:71986212-71986231 Msa1212130:CDS 30.0%
CATTAGAAGATGAACTTCTT+GGG - chr8_1:71986268-71986287 None:intergenic 30.0%
ATACTCTAATAATCAAGCTG+CGG + chr8_1:71986295-71986314 Msa1212130:CDS 30.0%
! AGAGCTTTGTATGAAAACAA+CGG + chr8_1:71986371-71986390 Msa1212130:CDS 30.0%
! ATATTGGTAGAAGGACTTTT+GGG + chr8_1:71986495-71986514 Msa1212130:CDS 30.0%
! TTGATTTTCATGGTACTTTG+TGG + chr8_1:71986558-71986577 Msa1212130:CDS 30.0%
TTATAAGCTCTTCATCAGTC+GGG - chr8_1:71985343-71985362 None:intergenic 35.0%
CTTATAAGCTCTTCATCAGT+CGG - chr8_1:71985344-71985363 None:intergenic 35.0%
TACTTACATGGTAAATCCCA+AGG - chr8_1:71985446-71985465 None:intergenic 35.0%
AGTGGGTCTGAAAATTTGAT+TGG - chr8_1:71985472-71985491 None:intergenic 35.0%
AGAGACAGAAAATATCCAAC+TGG + chr8_1:71985630-71985649 Msa1212130:CDS 35.0%
GAGACAGAAAATATCCAACT+GGG + chr8_1:71985631-71985650 Msa1212130:CDS 35.0%
!! TATGCATGAATATCGACTTG+AGG + chr8_1:71985803-71985822 Msa1212130:CDS 35.0%
!! ATGCATGAATATCGACTTGA+GGG + chr8_1:71985804-71985823 Msa1212130:CDS 35.0%
TAATCTTCCAAAAGCTGCAA+AGG + chr8_1:71985842-71985861 Msa1212130:CDS 35.0%
! AAGAATACCTTTGCAGCTTT+TGG - chr8_1:71985852-71985871 None:intergenic 35.0%
! AGAATGAATGGGTGATTTGT+AGG + chr8_1:71985973-71985992 Msa1212130:intron 35.0%
! GAATGAATGGGTGATTTGTA+GGG + chr8_1:71985974-71985993 Msa1212130:intron 35.0%
!! TTTTTCAGAAGAGTTCAGCT+GGG + chr8_1:71985997-71986016 Msa1212130:CDS 35.0%
ATAATGAGGTTGGATTCACT+TGG + chr8_1:71986041-71986060 Msa1212130:CDS 35.0%
ATGTTCAAAGAAACCAAGGA+GGG + chr8_1:71986177-71986196 Msa1212130:CDS 35.0%
CCATTAGAAGATGAACTTCT+TGG - chr8_1:71986269-71986288 None:intergenic 35.0%
CCAAGAAGTTCATCTTCTAA+TGG + chr8_1:71986266-71986285 Msa1212130:CDS 35.0%
!! CAATATCCTAGTTCTGTTTG+TGG + chr8_1:71986326-71986345 Msa1212130:CDS 35.0%
ACAAATGATGAGTGTATCAC+AGG + chr8_1:71986415-71986434 Msa1212130:CDS 35.0%
! GATATTGGTAGAAGGACTTT+TGG + chr8_1:71986494-71986513 Msa1212130:CDS 35.0%
TTATAAGCTCTTCATCAGTC+GGG - chr8_1:71985343-71985362 None:intergenic 35.0%
CTTATAAGCTCTTCATCAGT+CGG - chr8_1:71985344-71985363 None:intergenic 35.0%
TACTTACATGGTAAATCCCA+AGG - chr8_1:71985446-71985465 None:intergenic 35.0%
AGTGGGTCTGAAAATTTGAT+TGG - chr8_1:71985472-71985491 None:intergenic 35.0%
AGAGACAGAAAATATCCAAC+TGG + chr8_1:71985630-71985649 Msa1212130:CDS 35.0%
GAGACAGAAAATATCCAACT+GGG + chr8_1:71985631-71985650 Msa1212130:CDS 35.0%
!! TATGCATGAATATCGACTTG+AGG + chr8_1:71985803-71985822 Msa1212130:CDS 35.0%
!! ATGCATGAATATCGACTTGA+GGG + chr8_1:71985804-71985823 Msa1212130:CDS 35.0%
TAATCTTCCAAAAGCTGCAA+AGG + chr8_1:71985842-71985861 Msa1212130:CDS 35.0%
! AAGAATACCTTTGCAGCTTT+TGG - chr8_1:71985852-71985871 None:intergenic 35.0%
! AGAATGAATGGGTGATTTGT+AGG + chr8_1:71985973-71985992 Msa1212130:intron 35.0%
! GAATGAATGGGTGATTTGTA+GGG + chr8_1:71985974-71985993 Msa1212130:intron 35.0%
!! TTTTTCAGAAGAGTTCAGCT+GGG + chr8_1:71985997-71986016 Msa1212130:CDS 35.0%
ATAATGAGGTTGGATTCACT+TGG + chr8_1:71986041-71986060 Msa1212130:CDS 35.0%
ATGTTCAAAGAAACCAAGGA+GGG + chr8_1:71986177-71986196 Msa1212130:CDS 35.0%
CCATTAGAAGATGAACTTCT+TGG - chr8_1:71986269-71986288 None:intergenic 35.0%
CCAAGAAGTTCATCTTCTAA+TGG + chr8_1:71986266-71986285 Msa1212130:CDS 35.0%
!! CAATATCCTAGTTCTGTTTG+TGG + chr8_1:71986326-71986345 Msa1212130:CDS 35.0%
ACAAATGATGAGTGTATCAC+AGG + chr8_1:71986415-71986434 Msa1212130:CDS 35.0%
! GATATTGGTAGAAGGACTTT+TGG + chr8_1:71986494-71986513 Msa1212130:CDS 35.0%
AATTTCTCTGCAAGAGCCAT+TGG + chr8_1:71985395-71985414 Msa1212130:CDS 40.0%
GAAAATATCCAACTGGGTTG+AGG + chr8_1:71985637-71985656 Msa1212130:CDS 40.0%
TTCAAAGGGAAATCGTTGGT+TGG + chr8_1:71985717-71985736 Msa1212130:CDS 40.0%
!! TACAAAGGAAGAGCACCTAA+AGG + chr8_1:71985762-71985781 Msa1212130:CDS 40.0%
!! GTTTTTCAGAAGAGTTCAGC+TGG + chr8_1:71985996-71986015 Msa1212130:CDS 40.0%
GAATTCGACGAATCAGTAAG+TGG - chr8_1:71986095-71986114 None:intergenic 40.0%
!! ACTGATTCGTCGAATTCGAT+TGG + chr8_1:71986098-71986117 Msa1212130:CDS 40.0%
! CTGATTCGTCGAATTCGATT+GGG + chr8_1:71986099-71986118 Msa1212130:CDS 40.0%
!! ATCAATTGAGTTGGAGAAGC+AGG - chr8_1:71986159-71986178 None:intergenic 40.0%
GATGTTCAAAGAAACCAAGG+AGG + chr8_1:71986176-71986195 Msa1212130:CDS 40.0%
ATGAATCAAAGATCCCTCCT+TGG - chr8_1:71986193-71986212 None:intergenic 40.0%
TGCATACCACAAACAGAACT+AGG - chr8_1:71986335-71986354 None:intergenic 40.0%
GATGAGTGTATCACAGGAAA+CGG + chr8_1:71986421-71986440 Msa1212130:CDS 40.0%
!!! GTTGCAGCTGTTGATTTTCA+TGG + chr8_1:71986548-71986567 Msa1212130:CDS 40.0%
AATTTCTCTGCAAGAGCCAT+TGG + chr8_1:71985395-71985414 Msa1212130:CDS 40.0%
GAAAATATCCAACTGGGTTG+AGG + chr8_1:71985637-71985656 Msa1212130:CDS 40.0%
TTCAAAGGGAAATCGTTGGT+TGG + chr8_1:71985717-71985736 Msa1212130:CDS 40.0%
!! TACAAAGGAAGAGCACCTAA+AGG + chr8_1:71985762-71985781 Msa1212130:CDS 40.0%
!! GTTTTTCAGAAGAGTTCAGC+TGG + chr8_1:71985996-71986015 Msa1212130:CDS 40.0%
GAATTCGACGAATCAGTAAG+TGG - chr8_1:71986095-71986114 None:intergenic 40.0%
!! ACTGATTCGTCGAATTCGAT+TGG + chr8_1:71986098-71986117 Msa1212130:CDS 40.0%
! CTGATTCGTCGAATTCGATT+GGG + chr8_1:71986099-71986118 Msa1212130:CDS 40.0%
!! ATCAATTGAGTTGGAGAAGC+AGG - chr8_1:71986159-71986178 None:intergenic 40.0%
GATGTTCAAAGAAACCAAGG+AGG + chr8_1:71986176-71986195 Msa1212130:CDS 40.0%
ATGAATCAAAGATCCCTCCT+TGG - chr8_1:71986193-71986212 None:intergenic 40.0%
TGCATACCACAAACAGAACT+AGG - chr8_1:71986335-71986354 None:intergenic 40.0%
GATGAGTGTATCACAGGAAA+CGG + chr8_1:71986421-71986440 Msa1212130:CDS 40.0%
!!! GTTGCAGCTGTTGATTTTCA+TGG + chr8_1:71986548-71986567 Msa1212130:CDS 40.0%
GTTGAGGTCTACATCACCAA+TGG - chr8_1:71985414-71985433 None:intergenic 45.0%
ACCTCAACAAGTCTGAACCT+TGG + chr8_1:71985426-71985445 Msa1212130:CDS 45.0%
CCTCAACAAGTCTGAACCTT+GGG + chr8_1:71985427-71985446 Msa1212130:CDS 45.0%
ACAAACAGAGCAACAGAAGC+AGG + chr8_1:71985660-71985679 Msa1212130:CDS 45.0%
CAAACAGAGCAACAGAAGCA+GGG + chr8_1:71985661-71985680 Msa1212130:CDS 45.0%
!! CAGGGTATTGGAAAGCAACT+GGG + chr8_1:71985679-71985698 Msa1212130:CDS 45.0%
TTCGACGAATCAGTAAGTGG+TGG - chr8_1:71986092-71986111 None:intergenic 45.0%
GTTGAGGTCTACATCACCAA+TGG - chr8_1:71985414-71985433 None:intergenic 45.0%
ACCTCAACAAGTCTGAACCT+TGG + chr8_1:71985426-71985445 Msa1212130:CDS 45.0%
CCTCAACAAGTCTGAACCTT+GGG + chr8_1:71985427-71985446 Msa1212130:CDS 45.0%
ACAAACAGAGCAACAGAAGC+AGG + chr8_1:71985660-71985679 Msa1212130:CDS 45.0%
CAAACAGAGCAACAGAAGCA+GGG + chr8_1:71985661-71985680 Msa1212130:CDS 45.0%
!! CAGGGTATTGGAAAGCAACT+GGG + chr8_1:71985679-71985698 Msa1212130:CDS 45.0%
TTCGACGAATCAGTAAGTGG+TGG - chr8_1:71986092-71986111 None:intergenic 45.0%
! GAGAAGATGGATTTGCCTCC+TGG + chr8_1:71985305-71985324 Msa1212130:CDS 50.0%
GGGTGAAATCGAAATCCAGG+AGG - chr8_1:71985323-71985342 None:intergenic 50.0%
GTCGGGTGAAATCGAAATCC+AGG - chr8_1:71985326-71985345 None:intergenic 50.0%
!! CCCAAGGTTCAGACTTGTTG+AGG - chr8_1:71985430-71985449 None:intergenic 50.0%
CTGTTTGTCCTCAACCCAGT+TGG - chr8_1:71985648-71985667 None:intergenic 50.0%
GAGCAACAGAAGCAGGGTAT+TGG + chr8_1:71985667-71985686 Msa1212130:CDS 50.0%
!! GCAGGGTATTGGAAAGCAAC+TGG + chr8_1:71985678-71985697 Msa1212130:CDS 50.0%
TCAACAGCTGCAACAGAAGC+AGG - chr8_1:71986542-71986561 None:intergenic 50.0%
! GAGAAGATGGATTTGCCTCC+TGG + chr8_1:71985305-71985324 Msa1212130:CDS 50.0%
GGGTGAAATCGAAATCCAGG+AGG - chr8_1:71985323-71985342 None:intergenic 50.0%
GTCGGGTGAAATCGAAATCC+AGG - chr8_1:71985326-71985345 None:intergenic 50.0%
!! CCCAAGGTTCAGACTTGTTG+AGG - chr8_1:71985430-71985449 None:intergenic 50.0%
CTGTTTGTCCTCAACCCAGT+TGG - chr8_1:71985648-71985667 None:intergenic 50.0%
GAGCAACAGAAGCAGGGTAT+TGG + chr8_1:71985667-71985686 Msa1212130:CDS 50.0%
!! GCAGGGTATTGGAAAGCAAC+TGG + chr8_1:71985678-71985697 Msa1212130:CDS 50.0%
TCAACAGCTGCAACAGAAGC+AGG - chr8_1:71986542-71986561 None:intergenic 50.0%
ACAGCTGCAACAGAAGCAGG+TGG - chr8_1:71986539-71986558 None:intergenic 55.0%
ACAGCTGCAACAGAAGCAGG+TGG - chr8_1:71986539-71986558 None:intergenic 55.0%
GCTGCAACAGAAGCAGGTGG+TGG - chr8_1:71986536-71986555 None:intergenic 60.0%
GCTGCAACAGAAGCAGGTGG+TGG - chr8_1:71986536-71986555 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71985269 71986589 71985269 ID=Msa1212130;Name=Msa1212130
chr8_1 mRNA 71985269 71986589 71985269 ID=Msa1212130-mRNA-1;Parent=Msa1212130;Name=Msa1212130-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.33|1|1|1|3|0|360
chr8_1 exon 71985269 71985458 71985269 ID=Msa1212130-mRNA-1:exon:24230;Parent=Msa1212130-mRNA-1
chr8_1 exon 71985586 71985863 71985586 ID=Msa1212130-mRNA-1:exon:24231;Parent=Msa1212130-mRNA-1
chr8_1 exon 71985975 71986589 71985975 ID=Msa1212130-mRNA-1:exon:24232;Parent=Msa1212130-mRNA-1
chr8_1 CDS 71985269 71985458 71985269 ID=Msa1212130-mRNA-1:cds;Parent=Msa1212130-mRNA-1
chr8_1 CDS 71985586 71985863 71985586 ID=Msa1212130-mRNA-1:cds;Parent=Msa1212130-mRNA-1
chr8_1 CDS 71985975 71986589 71985975 ID=Msa1212130-mRNA-1:cds;Parent=Msa1212130-mRNA-1
Gene Sequence

>Msa1212130

ATGGAAAACGTTTCAGTCTTATCAAATAAGGAAGATGAGAAGATGGATTTGCCTCCTGGATTTCGATTTCACCCGACTGATGAAGAGCTTATAAGTCATTACCTTTACAAAAAGGTTATTGATTCAAATTTCTCTGCAAGAGCCATTGGTGATGTAGACCTCAACAAGTCTGAACCTTGGGATTTACCATTTAAAGCAAAAATGGGAGAAAAAGAATGGTACTTTTTCTGTGTGAGAGACAGAAAATATCCAACTGGGTTGAGGACAAACAGAGCAACAGAAGCAGGGTATTGGAAAGCAACTGGGAAAGATAAAGAAATTTTCAAAGGGAAATCGTTGGTTGGTATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAAAAAAGTAATTGGGTTATGCATGAATATCGACTTGAGGGTAAATTCTCTGTTCATAATCTTCCAAAAGCTGCAAAGAATGAATGGGTGATTTGTAGGGTTTTTCAGAAGAGTTCAGCTGGGAAAAAAACACATATTTCTGGTATAATGAGGTTGGATTCACTTGGTAATGAATTTGGTTGTTCTGTTTTACCACCACTTACTGATTCGTCGAATTCGATTGGGAAAATCAAACAATTGAATGATTCGGCTTACGTGTCCTGCTTCTCCAACTCAATTGATGTTCAAAGAAACCAAGGAGGGATCTTTGATTCATTCAACAACTCAATTTATGGTGGAATTTCTTCACATAATCAACTAGATTTTTTCCCAAGAAGTTCATCTTCTAATGGTTCATTATACTCTAATAATCAAGCTGCGGTTAATTTGCAATATCCTAGTTCTGTTTGTGGTATGCAAGATCAAACAATTTTAAGAGCTTTGTATGAAAACAACGGTTTCAAGACTGAGAGACAGCAACAAATGATGAGTGTATCACAGGAAACGGATCTAACTACTGATATGAATGCTGAAACATGTTCTGTTGTGTCAAATTTTGATATTGGTAGAAGGACTTTTGGGAATAATCAGAATCGTCCACCACCTGCTTCTGTTGCAGCTGTTGATTTTCATGGTACTTTGTGGAATTACTAA

Protein sequence

>Msa1212130

MENVSVLSNKEDEKMDLPPGFRFHPTDEELISHYLYKKVIDSNFSARAIGDVDLNKSEPWDLPFKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSVHNLPKAAKNEWVICRVFQKSSAGKKTHISGIMRLDSLGNEFGCSVLPPLTDSSNSIGKIKQLNDSAYVSCFSNSIDVQRNQGGIFDSFNNSIYGGISSHNQLDFFPRSSSSNGSLYSNNQAAVNLQYPSSVCGMQDQTILRALYENNGFKTERQQQMMSVSQETDLTTDMNAETCSVVSNFDIGRRTFGNNQNRPPPASVAAVDFHGTLWNY*