Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524350 | XP_024634560.1 | 85.902 | 532 | 59 | 5 | 1 | 519 | 1 | 529 | 0.0 | 876 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524350 | sp|Q5ZLT0|XPO7_CHICK | 40.000 | 540 | 283 | 11 | 3 | 512 | 8 | 536 | 6.25e-111 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524350 | A0A6P4BZM7 | 78.598 | 542 | 81 | 6 | 1 | 519 | 1 | 530 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045560 | Msa0524350 | 0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa0095830 | Msa0524350 | 0.800938 | 1.139775e-48 | -8.615850e-47 |
| Msa0179250 | Msa0524350 | 0.805037 | 1.619959e-49 | -8.615850e-47 |
| Msa0379800 | Msa0524350 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0382690 | Msa0524350 | 0.817325 | 3.497276e-52 | -8.615850e-47 |
| Msa0269800 | Msa0524350 | 0.828357 | 9.401680e-55 | -8.615850e-47 |
| Msa0524350 | Msa0538740 | 0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa0524350 | Msa0572050 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
| Msa0524350 | Msa0827500 | 0.812780 | 3.567904e-51 | -8.615850e-47 |
| Msa0524350 | Msa1256070 | 0.840664 | 7.588744e-58 | -8.615850e-47 |
| Msa0524350 | Msa1377960 | 0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0524350 | Msa1404220 | 0.845433 | 4.073448e-59 | -8.615850e-47 |
| Msa0524350 | Msa1424560 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524350 | MtrunA17_Chr3g0145701 | 85.902 | 532 | 59 | 5 | 1 | 519 | 1 | 529 | 0.0 | 875 |
| Msa0524350 | MtrunA17_Chr1g0171801 | 62.830 | 530 | 181 | 6 | 3 | 519 | 4 | 530 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524350 | AT5G06120.1 | 66.667 | 543 | 140 | 7 | 3 | 519 | 12 | 539 | 0.0 | 696 |
| Msa0524350 | AT5G06120.5 | 66.667 | 543 | 140 | 7 | 3 | 519 | 12 | 539 | 0.0 | 695 |
| Msa0524350 | AT5G06120.9 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.7 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.10 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.4 | 66.667 | 543 | 140 | 7 | 3 | 519 | 12 | 539 | 0.0 | 695 |
| Msa0524350 | AT5G06120.3 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.6 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.8 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
| Msa0524350 | AT5G06120.2 | 66.667 | 543 | 140 | 7 | 3 | 519 | 4 | 531 | 0.0 | 695 |
Find 109 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGTCGAGTCACCAAATT+TGG | 0.119855 | 3_4:+77827509 | Msa0524350:CDS |
| AATCGCTTTCTTCAATTTCT+TGG | 0.152793 | 3_4:-77826959 | None:intergenic |
| AAATGTTTGTTCTGTTTAAA+TGG | 0.153742 | 3_4:-77827610 | None:intergenic |
| TCCATATTTATGCAGATTTC+AGG | 0.204763 | 3_4:+77833355 | Msa0524350:CDS |
| ATCATCAAACCATCCAAATT+TGG | 0.251896 | 3_4:-77827522 | None:intergenic |
| ACAGAACAAACATTTGTTTC+AGG | 0.255693 | 3_4:+77827618 | Msa0524350:CDS |
| ACCTGAAATCTGCATAAATA+TGG | 0.283498 | 3_4:-77833356 | None:intergenic |
| ATGAAACTTTCAGTAATCTT+AGG | 0.286307 | 3_4:-77833118 | None:intergenic |
| ATCTCCCTGGAAATCAGTTT+TGG | 0.289369 | 3_4:+77828388 | Msa0524350:CDS |
| CCCTGTTTGCAGGATTGCTT+TGG | 0.296478 | 3_4:-77828811 | None:intergenic |
| CAATACCTTGCCCTGTTTGC+AGG | 0.299654 | 3_4:-77828821 | None:intergenic |
| GGTGCATCACCCTTCAAATA+TGG | 0.301482 | 3_4:-77833073 | None:intergenic |
| AGACAATGCTGAACTTCTTC+AGG | 0.320178 | 3_4:+77833316 | Msa0524350:CDS |
| CAGAACTCGAGCTGAAATTT+CGG | 0.331098 | 3_4:-77834792 | None:intergenic |
| GTCCTCCAAAACTGATTTCC+AGG | 0.335992 | 3_4:-77828393 | None:intergenic |
| AAGAAGTTCAGCATTGTCTA+AGG | 0.336001 | 3_4:-77833312 | None:intergenic |
| CTCTTAAATCTTTGCAATCA+TGG | 0.353652 | 3_4:+77832737 | Msa0524350:CDS |
| TTTGTTCTTGTAATCTATCT+AGG | 0.359317 | 3_4:+77827653 | Msa0524350:CDS |
| GGGTGATGCACCAAGCTTAC+TGG | 0.361200 | 3_4:+77833084 | Msa0524350:CDS |
| AACAGTGTCTACTACCTGTT+AGG | 0.367812 | 3_4:+77833022 | Msa0524350:CDS |
| TTTCCAGGCACTGGAGTGCT+TGG | 0.371341 | 3_4:+77828707 | Msa0524350:intron |
| CTTAGAACGGGCAGCATCAT+TGG | 0.371576 | 3_4:-77828763 | None:intergenic |
| TTGAGAGAATCACGTTTGTT+TGG | 0.375121 | 3_4:+77827056 | Msa0524350:five_prime_UTR |
| ATAGGAAAGGGCAAGATTAC+AGG | 0.375379 | 3_4:+77834514 | Msa0524350:intron |
| GCTTATTTCCGAGATGAATC+AGG | 0.385495 | 3_4:+77827719 | Msa0524350:CDS |
| ACCAAAGCAATCCTGCAAAC+AGG | 0.389292 | 3_4:+77828810 | Msa0524350:CDS |
| ATCTGGACCACAGCCCTAAC+AGG | 0.389992 | 3_4:-77833036 | None:intergenic |
| ACCACACCGTGTATATTTGC+AGG | 0.400019 | 3_4:-77834394 | None:intergenic |
| TCTTCAAACCAATGGCATAA+TGG | 0.413679 | 3_4:-77827686 | None:intergenic |
| GTCTTCTGTTCCATATTTGA+AGG | 0.416440 | 3_4:+77833063 | Msa0524350:CDS |
| GAGTACACAGTCAGGTATAC+TGG | 0.429291 | 3_4:+77834840 | Msa0524350:CDS |
| TCACGTTTGTTTGGCGGCGG+CGG | 0.432782 | 3_4:+77827065 | Msa0524350:five_prime_UTR |
| ATCAAGAATGTATTGGCATT+GGG | 0.439742 | 3_4:-77827210 | None:intergenic |
| AGATGAGTTTGGCACAGTTC+AGG | 0.443836 | 3_4:+77828266 | Msa0524350:CDS |
| CGGCGGCGGTGCGATGGAGT+TGG | 0.448371 | 3_4:+77827079 | Msa0524350:exon |
| CTTTGGTTCCAGTCATTAAG+TGG | 0.452585 | 3_4:-77828794 | None:intergenic |
| GATCAAGAATGTATTGGCAT+TGG | 0.460672 | 3_4:-77827211 | None:intergenic |
| AAGGGGTTCTCAAGATCATC+AGG | 0.463010 | 3_4:-77833293 | None:intergenic |
| TATATGTAGTGTGGAATCTC+AGG | 0.463284 | 3_4:+77834757 | Msa0524350:intron |
| AGAGAATCACGTTTGTTTGG+CGG | 0.465812 | 3_4:+77827059 | Msa0524350:five_prime_UTR |
| CATCAGTCAATTGCAAGAAC+TGG | 0.467267 | 3_4:+77828179 | Msa0524350:CDS |
| TAAATCTTTGCAATCATGGC+AGG | 0.468213 | 3_4:+77832741 | Msa0524350:CDS |
| ATCTACCAACTTCTTGAGTC+AGG | 0.469355 | 3_4:+77827571 | Msa0524350:CDS |
| GATGAAAGTTCAGATGAGTT+TGG | 0.470323 | 3_4:+77828255 | Msa0524350:CDS |
| ACTCCCGGCCATTATGCCAT+TGG | 0.472401 | 3_4:+77827678 | Msa0524350:CDS |
| GTTTGGCGGCGGCGGTGCGA+TGG | 0.476991 | 3_4:+77827073 | Msa0524350:exon |
| AAGCATGATCAAGAATGTAT+TGG | 0.478959 | 3_4:-77827217 | None:intergenic |
| CAGGTAGTAGACACTGTTGC+TGG | 0.479468 | 3_4:-77833017 | None:intergenic |
| AGGTTGTAACTCAGGTCCTC+TGG | 0.483892 | 3_4:-77827459 | None:intergenic |
| CGAGAGGCTTTACAATTCAC+AGG | 0.485216 | 3_4:+77827121 | Msa0524350:CDS |
| CGAAAGAGGGGACTTTGTAA+TGG | 0.489565 | 3_4:-77828450 | None:intergenic |
| TGGAACAGAAGACACCAATC+TGG | 0.491889 | 3_4:-77833053 | None:intergenic |
| CAGTTCTTGCAATTGACTGA+TGG | 0.494882 | 3_4:-77828178 | None:intergenic |
| GTTAGGGCTGTGGTCCAGAT+TGG | 0.501223 | 3_4:+77833039 | Msa0524350:CDS |
| TAAAACAATGCACGGGATGT+AGG | 0.502883 | 3_4:+77834615 | Msa0524350:CDS |
| CAAACCAATGGCATAATGGC+CGG | 0.505524 | 3_4:-77827682 | None:intergenic |
| TGATTGAAGACAAACTCGCT+TGG | 0.505780 | 3_4:+77834561 | Msa0524350:CDS |
| CTAGCAAGCATCAAAGCATA+AGG | 0.508092 | 3_4:-77827245 | None:intergenic |
| ACCGTGTATATTTGCAGGAC+AGG | 0.509224 | 3_4:-77834389 | None:intergenic |
| AAAACTGATTTCCAGGGAGA+TGG | 0.526525 | 3_4:-77828386 | None:intergenic |
| CCAAAGCAATCCTGCAAACA+GGG | 0.527387 | 3_4:+77828811 | Msa0524350:CDS |
| ACATATTCATCCAGTAAGCT+TGG | 0.534560 | 3_4:-77833094 | None:intergenic |
| ATCAAGATTCAATTCTGTGC+AGG | 0.535637 | 3_4:+77833144 | Msa0524350:CDS |
| TCTTCTGTTCCATATTTGAA+GGG | 0.536085 | 3_4:+77833064 | Msa0524350:CDS |
| TGGTGACTCGACAGAGAAGT+TGG | 0.537298 | 3_4:-77827502 | None:intergenic |
| TTGGCATTGGGAAATGTAAT+CGG | 0.537337 | 3_4:-77827198 | None:intergenic |
| GTTTGCAGATTCCATCTCCC+TGG | 0.538130 | 3_4:+77828375 | Msa0524350:intron |
| GTCGAGTCACCAAATTTGGA+TGG | 0.538240 | 3_4:+77827513 | Msa0524350:CDS |
| TCTTAAGATAAAACAATGCA+CGG | 0.538696 | 3_4:+77834607 | Msa0524350:CDS |
| TACAAAGTCCCCTCTTTCGA+AGG | 0.541985 | 3_4:+77828454 | Msa0524350:CDS |
| AAACCAATGGCATAATGGCC+GGG | 0.543317 | 3_4:-77827681 | None:intergenic |
| TTAAACGAAAACTCAAAAGA+AGG | 0.543902 | 3_4:-77829274 | None:intergenic |
| GAATCACGTTTGTTTGGCGG+CGG | 0.544028 | 3_4:+77827062 | Msa0524350:five_prime_UTR |
| ATGAGAGAAGCAGTCACAAA+AGG | 0.545495 | 3_4:-77827479 | None:intergenic |
| TCTACTACCTGTTAGGGCTG+TGG | 0.547307 | 3_4:+77833029 | Msa0524350:CDS |
| GTCACAAAAGGTTGTAACTC+AGG | 0.553590 | 3_4:-77827467 | None:intergenic |
| TTTCAAATCAAGACTATGAT+CGG | 0.554173 | 3_4:-77827291 | None:intergenic |
| ATGTGGAAGGCTATAGCGAT+TGG | 0.555477 | 3_4:+77832692 | Msa0524350:CDS |
| ATTCAATATCTTCAAACCAA+TGG | 0.556994 | 3_4:-77827694 | None:intergenic |
| GTACGGACCTCCTTCGAAAG+AGG | 0.557538 | 3_4:-77828464 | None:intergenic |
| AGAAGTTCAGCATTGTCTAA+GGG | 0.557730 | 3_4:-77833311 | None:intergenic |
| TAATCTATCTAGGCAACTCC+CGG | 0.558988 | 3_4:+77827663 | Msa0524350:CDS |
| GTTTGTCTTCAATCACAGAA+AGG | 0.570665 | 3_4:-77834553 | None:intergenic |
| TTTGGTTCCAGTCATTAAGT+GGG | 0.571340 | 3_4:-77828793 | None:intergenic |
| TGACAGTGGAGTACACAGTC+AGG | 0.571662 | 3_4:+77834832 | Msa0524350:CDS |
| CAGCACCTGACTCAAGAAGT+TGG | 0.571748 | 3_4:-77827576 | None:intergenic |
| AAAGTCCCCTCTTTCGAAGG+AGG | 0.573039 | 3_4:+77828457 | Msa0524350:CDS |
| GCAATCCTGCAAACAGGGCA+AGG | 0.578191 | 3_4:+77828816 | Msa0524350:CDS |
| TCAAATCAAATCAGAACGAA+CGG | 0.578977 | 3_4:-77827032 | None:intergenic |
| TACGGACCTCCTTCGAAAGA+GGG | 0.586032 | 3_4:-77828463 | None:intergenic |
| ATGTCTAACCTGATTCATCT+CGG | 0.588069 | 3_4:-77827727 | None:intergenic |
| TCTGAGCTTGTCAATGTGGA+AGG | 0.589859 | 3_4:+77832679 | Msa0524350:CDS |
| GAAGTTCAGCATTGTCTAAG+GGG | 0.595014 | 3_4:-77833310 | None:intergenic |
| CTTAAGATAAAACAATGCAC+GGG | 0.596209 | 3_4:+77834608 | Msa0524350:CDS |
| TAGATTCTTTGACAAGGTCG+CGG | 0.608461 | 3_4:-77827553 | None:intergenic |
| ACAGTGTCTACTACCTGTTA+GGG | 0.614515 | 3_4:+77833023 | Msa0524350:CDS |
| TCCTCCAAAACTGATTTCCA+GGG | 0.616669 | 3_4:-77828392 | None:intergenic |
| AACTTGAAGCATTATGCGAG+AGG | 0.617193 | 3_4:+77827105 | Msa0524350:CDS |
| GTTGTCTGAGCTTGTCAATG+TGG | 0.620218 | 3_4:+77832675 | Msa0524350:intron |
| TTGATCAATGTAACTGACAG+TGG | 0.621003 | 3_4:+77834818 | Msa0524350:CDS |
| ATCAACTATCTCGCCACCAG+AGG | 0.621385 | 3_4:+77827443 | Msa0524350:CDS |
| TGGTGGCGAGATAGTTGATG+AGG | 0.649218 | 3_4:-77827439 | None:intergenic |
| AGTTGGTAGATTCTTTGACA+AGG | 0.649356 | 3_4:-77827559 | None:intergenic |
| TTGTAACTCAGGTCCTCTGG+TGG | 0.655222 | 3_4:-77827456 | None:intergenic |
| GCCTGTCCTGCAAATATACA+CGG | 0.661134 | 3_4:+77834388 | Msa0524350:CDS |
| TATACATACATATATCAAGA+CGG | 0.666469 | 3_4:-77827316 | None:intergenic |
| ACGGACCTCCTTCGAAAGAG+GGG | 0.667581 | 3_4:-77828462 | None:intergenic |
| GGCGAGATAGTTGATGAGGT+AGG | 0.690247 | 3_4:-77827435 | None:intergenic |
| TGACTGTAATAATGCTGATG+CGG | 0.700249 | 3_4:+77829318 | Msa0524350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAATAACTATTAGA+AGG | + | chr3_4:77830813-77830832 | Msa0524350:intron | 10.0% |
| !!! | TAAAATTGATTATTTTCAAA+TGG | + | chr3_4:77830858-77830877 | Msa0524350:intron | 10.0% |
| !!! | TTAATTTTATTCTATGATTA+TGG | + | chr3_4:77831337-77831356 | Msa0524350:intron | 10.0% |
| !!! | ATTTATTTTACAAATTTAGA+TGG | - | chr3_4:77832649-77832668 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832421-77832440 | Msa0524350:intron | 100.0% |
| !!! | TTGTGAATAGTATTTTATAT+CGG | - | chr3_4:77828557-77828576 | None:intergenic | 15.0% |
| !!! | AATATAATATTTTTCCAGTT+AGG | - | chr3_4:77828885-77828904 | None:intergenic | 15.0% |
| !! | TAATATTACCAAAAAATAAG+TGG | - | chr3_4:77828942-77828961 | None:intergenic | 15.0% |
| !! | GTAGAATTAAATAAACTTAA+AGG | - | chr3_4:77829047-77829066 | None:intergenic | 15.0% |
| !! | GTAGAATTAAATAAACTTAA+AGG | - | chr3_4:77829047-77829066 | None:intergenic | 15.0% |
| !!! | CTCTAATTAATTTTAATTTG+AGG | - | chr3_4:77829412-77829431 | None:intergenic | 15.0% |
| !!! | ATTTTACCTATTTATATTCA+CGG | + | chr3_4:77830071-77830090 | Msa0524350:intron | 15.0% |
| !! | CTTATAATATGTTTCAAAAA+TGG | + | chr3_4:77830462-77830481 | Msa0524350:intron | 15.0% |
| !! | TTATAATAGCTTAAAAGAAT+AGG | - | chr3_4:77830684-77830703 | None:intergenic | 15.0% |
| !! | AAAAATATTAAACAATGTCT+TGG | - | chr3_4:77830762-77830781 | None:intergenic | 15.0% |
| !!! | AAGACATTGTTTAATATTTT+TGG | + | chr3_4:77830761-77830780 | Msa0524350:intron | 15.0% |
| !!! | TTTTATTTATAGAAAACATG+AGG | + | chr3_4:77830784-77830803 | Msa0524350:intron | 15.0% |
| !!! | ATATGGTTATTTTGAAATTT+GGG | - | chr3_4:77830992-77831011 | None:intergenic | 15.0% |
| !!! | AATATGGTTATTTTGAAATT+TGG | - | chr3_4:77830993-77831012 | None:intergenic | 15.0% |
| !! | TAACTGATATAATTTACTAA+AGG | - | chr3_4:77831058-77831077 | None:intergenic | 15.0% |
| !!! | ATTTATAATTTTGACTGTTT+TGG | + | chr3_4:77832027-77832046 | Msa0524350:intron | 15.0% |
| !!! | TTTATAATTTTGACTGTTTT+GGG | + | chr3_4:77832028-77832047 | Msa0524350:intron | 15.0% |
| !! | TAAAAAGTAATATTATGATG+TGG | + | chr3_4:77832265-77832284 | Msa0524350:intron | 15.0% |
| !!! | AAAATATTTTCCTTACTAAT+TGG | + | chr3_4:77832353-77832372 | Msa0524350:intron | 15.0% |
| !! | AACAAAAACTAGTAAATAAT+TGG | - | chr3_4:77832524-77832543 | None:intergenic | 15.0% |
| !!! | ACAGTTTTATTGATAAAATT+TGG | + | chr3_4:77832587-77832606 | Msa0524350:intron | 15.0% |
| !! | AACGATAACATAAAATATAT+AGG | - | chr3_4:77833385-77833404 | None:intergenic | 15.0% |
| !! | TATACATACATATATCAAGA+CGG | - | chr3_4:77827319-77827338 | None:intergenic | 20.0% |
| !! | AAATGTTTGTTCTGTTTAAA+TGG | - | chr3_4:77827613-77827632 | None:intergenic | 20.0% |
| !! | ACAAGAACAAAAATGTAAAA+CGG | - | chr3_4:77827644-77827663 | None:intergenic | 20.0% |
| !! | TGATTCACACTTAATTATAA+TGG | - | chr3_4:77827836-77827855 | None:intergenic | 20.0% |
| !! | GAAATATTTGAAAAAGAGAT+TGG | - | chr3_4:77828024-77828043 | None:intergenic | 20.0% |
| !!! | ATGTTTATCATTTGATTTTG+TGG | + | chr3_4:77828221-77828240 | Msa0524350:CDS | 20.0% |
| !!! | TGTTTATCATTTGATTTTGT+GGG | + | chr3_4:77828222-77828241 | Msa0524350:CDS | 20.0% |
| !!! | TTCTTGTTATTGTTTTATGT+AGG | + | chr3_4:77828607-77828626 | Msa0524350:intron | 20.0% |
| !!! | CATTTATTCCACTTATTTTT+TGG | + | chr3_4:77828931-77828950 | Msa0524350:intron | 20.0% |
| !! | ACATGCATATTGAAAATTAA+AGG | + | chr3_4:77829694-77829713 | Msa0524350:intron | 20.0% |
| !! | TGAAAGAAAGAAACTAAAAA+AGG | + | chr3_4:77829945-77829964 | Msa0524350:intron | 20.0% |
| !! | GAAAGAAAGAAACTAAAAAA+GGG | + | chr3_4:77829946-77829965 | Msa0524350:intron | 20.0% |
| !!! | TTTTCAAAAAATCTATGCAA+CGG | - | chr3_4:77830354-77830373 | None:intergenic | 20.0% |
| !!! | TTGCATAGATTTTTTGAAAA+GGG | + | chr3_4:77830354-77830373 | Msa0524350:intron | 20.0% |
| !! | TTTAAGCTATTATAATTGAC+CGG | + | chr3_4:77830689-77830708 | Msa0524350:intron | 20.0% |
| !! | ATGTTCAAAATAACAGAATA+TGG | - | chr3_4:77831009-77831028 | None:intergenic | 20.0% |
| !! | CAGTCAAAATTATAAATTCA+TGG | - | chr3_4:77832024-77832043 | None:intergenic | 20.0% |
| !!! | TTATAATTTTGACTGTTTTG+GGG | + | chr3_4:77832029-77832048 | Msa0524350:intron | 20.0% |
| !! | AAAAATAGATATTCCACAAA+TGG | - | chr3_4:77832152-77832171 | None:intergenic | 20.0% |
| !! | ATAATAGTGTGAAATATGAT+GGG | - | chr3_4:77832194-77832213 | None:intergenic | 20.0% |
| !! | AATAATAGTGTGAAATATGA+TGG | - | chr3_4:77832195-77832214 | None:intergenic | 20.0% |
| !!! | AGTATTTAAAGTGTCAATTT+GGG | - | chr3_4:77832490-77832509 | None:intergenic | 20.0% |
| !!! | AAGTATTTAAAGTGTCAATT+TGG | - | chr3_4:77832491-77832510 | None:intergenic | 20.0% |
| !!! | GTTTTATTGATAAAATTTGG+TGG | + | chr3_4:77832590-77832609 | Msa0524350:intron | 20.0% |
| !! | AAAGAAATAATTAACTGAGA+AGG | + | chr3_4:77833420-77833439 | Msa0524350:intron | 20.0% |
| !! | GAAATTACAGAATTCTATTT+AGG | + | chr3_4:77833756-77833775 | Msa0524350:intron | 20.0% |
| !! | GCATATAAATGATTTAATCT+TGG | + | chr3_4:77833794-77833813 | Msa0524350:intron | 20.0% |
| !! | TATAAATGATTTAATCTTGG+TGG | + | chr3_4:77833797-77833816 | Msa0524350:intron | 20.0% |
| !! | ATAAATGATTTAATCTTGGT+GGG | + | chr3_4:77833798-77833817 | Msa0524350:intron | 20.0% |
| !!! | GATTTTGAATTCTAAACTTA+AGG | + | chr3_4:77834106-77834125 | Msa0524350:intron | 20.0% |
| !! | ATCAGTACAAAAAGATAAAA+GGG | - | chr3_4:77834441-77834460 | None:intergenic | 20.0% |
| !! | AATCAGTACAAAAAGATAAA+AGG | - | chr3_4:77834442-77834461 | None:intergenic | 20.0% |
| !! | CACTACATATAGAAATATTA+TGG | - | chr3_4:77834748-77834767 | None:intergenic | 20.0% |
| !!! | TAATATTTCTATATGTAGTG+TGG | + | chr3_4:77834748-77834767 | Msa0524350:intron | 20.0% |
| !!! | CAAACATTATTTTATATGCT+TGG | + | chr3_4:77834865-77834884 | Msa0524350:CDS | 20.0% |
| ! | TTTCAAATCAAGACTATGAT+CGG | - | chr3_4:77827294-77827313 | None:intergenic | 25.0% |
| ! | TTTGTTCTTGTAATCTATCT+AGG | + | chr3_4:77827653-77827672 | Msa0524350:CDS | 25.0% |
| ! | ATTCAATATCTTCAAACCAA+TGG | - | chr3_4:77827697-77827716 | None:intergenic | 25.0% |
| ! | GTAGATTAGAATACAGAATA+CGG | - | chr3_4:77827804-77827823 | None:intergenic | 25.0% |
| ! | AATATGCAATAGCTAAGTTA+AGG | - | chr3_4:77827878-77827897 | None:intergenic | 25.0% |
| ! | TCAGATATCTTTAACATCAT+TGG | + | chr3_4:77828042-77828061 | Msa0524350:intron | 25.0% |
| ! | CAGATATCTTTAACATCATT+GGG | + | chr3_4:77828043-77828062 | Msa0524350:intron | 25.0% |
| ! | ACTAAAAAGTAGTAAAGAGA+CGG | - | chr3_4:77828120-77828139 | None:intergenic | 25.0% |
| !!! | GTTTATCATTTGATTTTGTG+GGG | + | chr3_4:77828223-77828242 | Msa0524350:CDS | 25.0% |
| ! | TTAGTTTAATTGATGTTTCG+AGG | + | chr3_4:77828300-77828319 | Msa0524350:intron | 25.0% |
| ! | CGTTTATTATGCTGTAAATA+TGG | + | chr3_4:77828350-77828369 | Msa0524350:intron | 25.0% |
| !! | ATTTTCATGACTTGAATATG+AGG | - | chr3_4:77828528-77828547 | None:intergenic | 25.0% |
| ! | TTAAACGAAAACTCAAAAGA+AGG | - | chr3_4:77829277-77829296 | None:intergenic | 25.0% |
| ! | TAAATGTAGACTTCAAAGAA+AGG | + | chr3_4:77829839-77829858 | Msa0524350:intron | 25.0% |
| ! | CGAATACAATATTTAGTGTT+AGG | + | chr3_4:77829900-77829919 | Msa0524350:intron | 25.0% |
| ! | TAAGTTTCAAAATGTACACA+TGG | - | chr3_4:77829977-77829996 | None:intergenic | 25.0% |
| ! | TGAAACTTAAAGAACTTAGT+CGG | + | chr3_4:77829988-77830007 | Msa0524350:intron | 25.0% |
| ! | TTAAAGTGATTTAATTGCAC+TGG | - | chr3_4:77830038-77830057 | None:intergenic | 25.0% |
| ! | AGTGCAATTAAATCACTTTA+AGG | + | chr3_4:77830037-77830056 | Msa0524350:intron | 25.0% |
| ! | AAATAGGTAAAATACACATG+TGG | - | chr3_4:77830064-77830083 | None:intergenic | 25.0% |
| !!! | TGTAGTTTATTTTTCTGCAA+AGG | - | chr3_4:77830321-77830340 | None:intergenic | 25.0% |
| !!! | GTTGCATAGATTTTTTGAAA+AGG | + | chr3_4:77830353-77830372 | Msa0524350:intron | 25.0% |
| ! | GAAAAGGGAAAAAACATAAT+TGG | + | chr3_4:77830369-77830388 | Msa0524350:intron | 25.0% |
| ! | AAAAACATAATTGGATCATG+CGG | + | chr3_4:77830378-77830397 | Msa0524350:intron | 25.0% |
| ! | AGTTCTTTGCATTCAATATT+GGG | - | chr3_4:77830433-77830452 | None:intergenic | 25.0% |
| ! | AAGTTCTTTGCATTCAATAT+TGG | - | chr3_4:77830434-77830453 | None:intergenic | 25.0% |
| !!! | TTATTTTGAAATTTGGGCTT+AGG | - | chr3_4:77830986-77831005 | None:intergenic | 25.0% |
| ! | CTGATATAATTTACTAAAGG+AGG | - | chr3_4:77831055-77831074 | None:intergenic | 25.0% |
| ! | CAATACAAAAGAAGCAAATA+AGG | - | chr3_4:77831104-77831123 | None:intergenic | 25.0% |
| !!! | CTTTTAATTTCATGACAATG+AGG | + | chr3_4:77831234-77831253 | Msa0524350:intron | 25.0% |
| ! | TCTTGAACTTGATGAAAATT+AGG | + | chr3_4:77831265-77831284 | Msa0524350:intron | 25.0% |
| ! | CTTGAACTTGATGAAAATTA+GGG | + | chr3_4:77831266-77831285 | Msa0524350:intron | 25.0% |
| !! | GTTTTTAAATTTTACGACAG+AGG | + | chr3_4:77831457-77831476 | Msa0524350:intron | 25.0% |
| ! | ACATAGAAATATAAGACAGA+TGG | - | chr3_4:77831727-77831746 | None:intergenic | 25.0% |
| !! | TCTGTCTTATATTTCTATGT+TGG | + | chr3_4:77831727-77831746 | Msa0524350:intron | 25.0% |
| !!! | CATTTTTAATTTGCTAAACC+AGG | - | chr3_4:77831897-77831916 | None:intergenic | 25.0% |
| ! | ACTTTAAATACTTGCACAAA+TGG | + | chr3_4:77832498-77832517 | Msa0524350:intron | 25.0% |
| ! | ACAATAAATCGTGTATTATC+AGG | - | chr3_4:77832796-77832815 | None:intergenic | 25.0% |
| !!! | CTTTTTAAGCCATTTATCTT+TGG | + | chr3_4:77832836-77832855 | Msa0524350:intron | 25.0% |
| !!! | TGAATTTTGTTTTCAAAGGT+GGG | - | chr3_4:77832880-77832899 | None:intergenic | 25.0% |
| !!! | ATCCTGAATTTTGTTTTCAA+AGG | - | chr3_4:77832884-77832903 | None:intergenic | 25.0% |
| ! | AATCATCAAAGTTTCAACTT+AGG | + | chr3_4:77832942-77832961 | Msa0524350:intron | 25.0% |
| ! | ATGAAACTTTCAGTAATCTT+AGG | - | chr3_4:77833121-77833140 | None:intergenic | 25.0% |
| ! | ACAAGACAACTAAAATAAAC+CGG | + | chr3_4:77833483-77833502 | Msa0524350:intron | 25.0% |
| !! | TATTGCATTTTAAACAAGCA+CGG | - | chr3_4:77833538-77833557 | None:intergenic | 25.0% |
| !! | TTCGCTTAATTCTAAAAAGT+AGG | - | chr3_4:77833580-77833599 | None:intergenic | 25.0% |
| !!! | AATGCTATATTGGCTTTTTA+AGG | + | chr3_4:77833829-77833848 | Msa0524350:intron | 25.0% |
| !! | CTATGGAGTTGAATTTTTAA+AGG | - | chr3_4:77833962-77833981 | None:intergenic | 25.0% |
| ! | TATTGAGTAGAATGAATTGA+GGG | - | chr3_4:77834026-77834045 | None:intergenic | 25.0% |
| ! | TTATTGAGTAGAATGAATTG+AGG | - | chr3_4:77834027-77834046 | None:intergenic | 25.0% |
| ! | CTTAACATAAAATGGTGAAT+TGG | + | chr3_4:77834060-77834079 | Msa0524350:intron | 25.0% |
| !! | TTTAGAATTCAAAATCAGAG+TGG | - | chr3_4:77834102-77834121 | None:intergenic | 25.0% |
| ! | AAATCAAAGTTGTCTCTTAA+TGG | - | chr3_4:77834156-77834175 | None:intergenic | 25.0% |
| !! | ACAAAAGCTTTGTATGAATT+TGG | - | chr3_4:77834186-77834205 | None:intergenic | 25.0% |
| !!! | ATACAAAGCTTTTGTTTCTA+TGG | + | chr3_4:77834191-77834210 | Msa0524350:intron | 25.0% |
| !!! | TTCTTAAACTGTTTCTATCA+AGG | + | chr3_4:77834235-77834254 | Msa0524350:intron | 25.0% |
| !!! | TCTTAAACTGTTTCTATCAA+GGG | + | chr3_4:77834236-77834255 | Msa0524350:intron | 25.0% |
| ! | TAAGAGTCTTCAATAATTGA+AGG | - | chr3_4:77834265-77834284 | None:intergenic | 25.0% |
| !!! | TTGCATTTTTTGAACAATTG+TGG | + | chr3_4:77834297-77834316 | Msa0524350:intron | 25.0% |
| !!! | ATCTTTTTGTACTGATTTGT+TGG | + | chr3_4:77834445-77834464 | Msa0524350:intron | 25.0% |
| !!! | TCTTTTTGTACTGATTTGTT+GGG | + | chr3_4:77834446-77834465 | Msa0524350:intron | 25.0% |
| ! | TCTTAAGATAAAACAATGCA+CGG | + | chr3_4:77834607-77834626 | Msa0524350:CDS | 25.0% |
| ! | TGAAACATAACACTAAAAAC+AGG | - | chr3_4:77834725-77834744 | None:intergenic | 25.0% |
| AATCGCTTTCTTCAATTTCT+TGG | - | chr3_4:77826962-77826981 | None:intergenic | 30.0% | |
| TCAAATCAAATCAGAACGAA+CGG | - | chr3_4:77827035-77827054 | None:intergenic | 30.0% | |
| ! | ATCAAGAATGTATTGGCATT+GGG | - | chr3_4:77827213-77827232 | None:intergenic | 30.0% |
| AAGCATGATCAAGAATGTAT+TGG | - | chr3_4:77827220-77827239 | None:intergenic | 30.0% | |
| TGCAATGCATGTTAATTGTT+AGG | + | chr3_4:77827410-77827429 | Msa0524350:intron | 30.0% | |
| GCAATGCATGTTAATTGTTA+GGG | + | chr3_4:77827411-77827430 | Msa0524350:intron | 30.0% | |
| ATCATCAAACCATCCAAATT+TGG | - | chr3_4:77827525-77827544 | None:intergenic | 30.0% | |
| ACAGAACAAACATTTGTTTC+AGG | + | chr3_4:77827618-77827637 | Msa0524350:CDS | 30.0% | |
| TAAAAAGTAGTAAAGAGACG+GGG | - | chr3_4:77828118-77828137 | None:intergenic | 30.0% | |
| CTAAAAAGTAGTAAAGAGAC+GGG | - | chr3_4:77828119-77828138 | None:intergenic | 30.0% | |
| AGAAACAAATGCATGATGTA+CGG | - | chr3_4:77828484-77828503 | None:intergenic | 30.0% | |
| ! | GTGTTTAATCGATTCACAAT+TGG | + | chr3_4:77828655-77828674 | Msa0524350:intron | 30.0% |
| ! | GAATAACTATTTTCCTTTCC+AGG | + | chr3_4:77828692-77828711 | Msa0524350:intron | 30.0% |
| !!! | CTTTACGTTTTTTCCTAATG+AGG | + | chr3_4:77829077-77829096 | Msa0524350:intron | 30.0% |
| !! | TTTTAAGTCTCAAAACGTTC+AGG | + | chr3_4:77829102-77829121 | Msa0524350:intron | 30.0% |
| !!! | CTTTACGTTTTTTCCTAATG+AGG | + | chr3_4:77829077-77829096 | Msa0524350:intron | 30.0% |
| !! | TTTTAAGTCTCAAAACGTTC+AGG | + | chr3_4:77829102-77829121 | Msa0524350:intron | 30.0% |
| TCCTTCTTCTTTAATTGAAG+AGG | + | chr3_4:77829438-77829457 | Msa0524350:intron | 30.0% | |
| TCCTCTTCAATTAAAGAAGA+AGG | - | chr3_4:77829442-77829461 | None:intergenic | 30.0% | |
| !! | CATCTTGCAAAGATTTGTTA+GGG | - | chr3_4:77829727-77829746 | None:intergenic | 30.0% |
| ! | TAAATTTTTCTCGTCTGGTT+GGG | - | chr3_4:77829765-77829784 | None:intergenic | 30.0% |
| ! | ATAAATTTTTCTCGTCTGGT+TGG | - | chr3_4:77829766-77829785 | None:intergenic | 30.0% |
| ! | AAGCATAAATTTTTCTCGTC+TGG | - | chr3_4:77829770-77829789 | None:intergenic | 30.0% |
| ! | TTAGTGTTAGGTTGTGAATT+TGG | + | chr3_4:77829912-77829931 | Msa0524350:intron | 30.0% |
| ! | TAGTGTTAGGTTGTGAATTT+GGG | + | chr3_4:77829913-77829932 | Msa0524350:intron | 30.0% |
| CCTAATCCGTGAATATAAAT+AGG | - | chr3_4:77830080-77830099 | None:intergenic | 30.0% | |
| CCTATTTATATTCACGGATT+AGG | + | chr3_4:77830077-77830096 | Msa0524350:intron | 30.0% | |
| CGGATAAAATACAACTTGAT+TGG | - | chr3_4:77830159-77830178 | None:intergenic | 30.0% | |
| TGTTATCACAAAGTTTAGGT+TGG | - | chr3_4:77830203-77830222 | None:intergenic | 30.0% | |
| AACCTAAACTTTGTGATAAC+AGG | + | chr3_4:77830202-77830221 | Msa0524350:intron | 30.0% | |
| AACCTGTTATCACAAAGTTT+AGG | - | chr3_4:77830207-77830226 | None:intergenic | 30.0% | |
| AGCTGAAATTAAACTACATG+TGG | + | chr3_4:77830291-77830310 | Msa0524350:intron | 30.0% | |
| AAAAGACAATAAATGGCAGA+GGG | - | chr3_4:77830549-77830568 | None:intergenic | 30.0% | |
| TAGAAAATCGGATCAGAATA+GGG | - | chr3_4:77830624-77830643 | None:intergenic | 30.0% | |
| ATAGAAAATCGGATCAGAAT+AGG | - | chr3_4:77830625-77830644 | None:intergenic | 30.0% | |
| AATGTCTTGGATTAAAATCC+GGG | - | chr3_4:77830749-77830768 | None:intergenic | 30.0% | |
| CAATGTCTTGGATTAAAATC+CGG | - | chr3_4:77830750-77830769 | None:intergenic | 30.0% | |
| TGTCTTGTACTTGATCAATA+TGG | + | chr3_4:77831486-77831505 | Msa0524350:intron | 30.0% | |
| !!! | ACTTTCGTCGTTAGATTTTT+TGG | + | chr3_4:77831586-77831605 | Msa0524350:intron | 30.0% |
| !! | TTTAATTTGCTAAACCAGGA+GGG | - | chr3_4:77831893-77831912 | None:intergenic | 30.0% |
| !!! | TTTTAATTTGCTAAACCAGG+AGG | - | chr3_4:77831894-77831913 | None:intergenic | 30.0% |
| TAAATTCATGGCTAACAAGA+AGG | - | chr3_4:77832012-77832031 | None:intergenic | 30.0% | |
| CACTAAAAAAATATCCATCG+TGG | - | chr3_4:77832242-77832261 | None:intergenic | 30.0% | |
| AATATTATGATGTGGCTAGA+TGG | + | chr3_4:77832273-77832292 | Msa0524350:intron | 30.0% | |
| CTCTTAAATCTTTGCAATCA+TGG | + | chr3_4:77832737-77832756 | Msa0524350:CDS | 30.0% | |
| !! | GCCATTTATCTTTGGAATAA+CGG | + | chr3_4:77832844-77832863 | Msa0524350:intron | 30.0% |
| !!! | CTGAATTTTGTTTTCAAAGG+TGG | - | chr3_4:77832881-77832900 | None:intergenic | 30.0% |
| ! | CACCTTTGAAAACAAAATTC+AGG | + | chr3_4:77832879-77832898 | Msa0524350:intron | 30.0% |
| TCTTCTGTTCCATATTTGAA+GGG | + | chr3_4:77833064-77833083 | Msa0524350:CDS | 30.0% | |
| GGTGTTAAACAAAATGCATA+TGG | - | chr3_4:77833216-77833235 | None:intergenic | 30.0% | |
| GAAAGTAGTCTCATTAATAG+AGG | - | chr3_4:77833237-77833256 | None:intergenic | 30.0% | |
| TCCATATTTATGCAGATTTC+AGG | + | chr3_4:77833355-77833374 | Msa0524350:CDS | 30.0% | |
| ACCTGAAATCTGCATAAATA+TGG | - | chr3_4:77833359-77833378 | None:intergenic | 30.0% | |
| ! | ACTTTGTTTATATCCTCCTT+TGG | - | chr3_4:77833457-77833476 | None:intergenic | 30.0% |
| ! | TTTTAAACAAGCACGGAATA+TGG | - | chr3_4:77833531-77833550 | None:intergenic | 30.0% |
| GTAGGATGTTGTACATTTAA+AGG | - | chr3_4:77833615-77833634 | None:intergenic | 30.0% | |
| GGGATATTAACAATCAATGT+AGG | - | chr3_4:77833633-77833652 | None:intergenic | 30.0% | |
| TAATGAATAAGCACTAACCT+AGG | - | chr3_4:77833671-77833690 | None:intergenic | 30.0% | |
| ! | CCATTTTATGTTAAGCTTGA+TGG | - | chr3_4:77834055-77834074 | None:intergenic | 30.0% |
| CCATCAAGCTTAACATAAAA+TGG | + | chr3_4:77834052-77834071 | Msa0524350:intron | 30.0% | |
| ! | AAAGCTTTGTATGAATTTGG+AGG | - | chr3_4:77834183-77834202 | None:intergenic | 30.0% |
| !!! | TTTTGTTTCTATGGAGGAAT+GGG | + | chr3_4:77834200-77834219 | Msa0524350:intron | 30.0% |
| ! | ATTTGTTGGGAAACATAAGT+TGG | + | chr3_4:77834459-77834478 | Msa0524350:intron | 30.0% |
| ! | CTGTTTTCAATGACTGAAAT+AGG | + | chr3_4:77834496-77834515 | Msa0524350:intron | 30.0% |
| TTCAATGACTGAAATAGGAA+AGG | + | chr3_4:77834501-77834520 | Msa0524350:intron | 30.0% | |
| TCAATGACTGAAATAGGAAA+GGG | + | chr3_4:77834502-77834521 | Msa0524350:intron | 30.0% | |
| CTTAAGATAAAACAATGCAC+GGG | + | chr3_4:77834608-77834627 | Msa0524350:CDS | 30.0% | |
| ATTCCAATAGATGAAAAGGT+AGG | - | chr3_4:77834656-77834675 | None:intergenic | 30.0% | |
| CAACATTCCAATAGATGAAA+AGG | - | chr3_4:77834660-77834679 | None:intergenic | 30.0% | |
| !! | AGAGCATATTCATTTTGACG+AGG | + | chr3_4:77826899-77826918 | Msa0524350:five_prime_UTR | 35.0% |
| !! | GAGCATATTCATTTTGACGA+GGG | + | chr3_4:77826900-77826919 | Msa0524350:five_prime_UTR | 35.0% |
| !! | AGCATATTCATTTTGACGAG+GGG | + | chr3_4:77826901-77826920 | Msa0524350:five_prime_UTR | 35.0% |
| TTGAGAGAATCACGTTTGTT+TGG | + | chr3_4:77827056-77827075 | Msa0524350:five_prime_UTR | 35.0% | |
| ! | TTGGCATTGGGAAATGTAAT+CGG | - | chr3_4:77827201-77827220 | None:intergenic | 35.0% |
| ! | GATCAAGAATGTATTGGCAT+TGG | - | chr3_4:77827214-77827233 | None:intergenic | 35.0% |
| !! | AGTTGGTAGATTCTTTGACA+AGG | - | chr3_4:77827562-77827581 | None:intergenic | 35.0% |
| TCTTCAAACCAATGGCATAA+TGG | - | chr3_4:77827689-77827708 | None:intergenic | 35.0% | |
| ATGTCTAACCTGATTCATCT+CGG | - | chr3_4:77827730-77827749 | None:intergenic | 35.0% | |
| ! | AAAAAGAGATTGGTCCCTAA+AGG | - | chr3_4:77828014-77828033 | None:intergenic | 35.0% |
| CTTTACCATCATTCTTCAAC+TGG | - | chr3_4:77828069-77828088 | None:intergenic | 35.0% | |
| GTTGAAGAATGATGGTAAAG+TGG | + | chr3_4:77828069-77828088 | Msa0524350:intron | 35.0% | |
| GATGAAAGTTCAGATGAGTT+TGG | + | chr3_4:77828255-77828274 | Msa0524350:CDS | 35.0% | |
| AGTGTAGAAGGAATAAGGTA+GGG | - | chr3_4:77828326-77828345 | None:intergenic | 35.0% | |
| AATAAACGAACCAGTGTAGA+AGG | - | chr3_4:77828338-77828357 | None:intergenic | 35.0% | |
| ! | TTTGGTTCCAGTCATTAAGT+GGG | - | chr3_4:77828796-77828815 | None:intergenic | 35.0% |
| GAGACTTAAAACACCTCATT+AGG | - | chr3_4:77829093-77829112 | None:intergenic | 35.0% | |
| GAGACTTAAAACACCTCATT+AGG | - | chr3_4:77829093-77829112 | None:intergenic | 35.0% | |
| TGACTGTAATAATGCTGATG+CGG | + | chr3_4:77829318-77829337 | Msa0524350:CDS | 35.0% | |
| !! | ACGTAATGAACAGCTTGTTT+TGG | + | chr3_4:77829622-77829641 | Msa0524350:intron | 35.0% |
| ! | GCATCTTGCAAAGATTTGTT+AGG | - | chr3_4:77829728-77829747 | None:intergenic | 35.0% |
| ! | AAAGGTACAAAACCCTTATG+TGG | + | chr3_4:77829857-77829876 | Msa0524350:intron | 35.0% |
| AAGGTACAAAACCCTTATGT+GGG | + | chr3_4:77829858-77829877 | Msa0524350:intron | 35.0% | |
| !! | ACTTGATTGGTTTGTTGATG+AGG | - | chr3_4:77830146-77830165 | None:intergenic | 35.0% |
| CAAAAGACAATAAATGGCAG+AGG | - | chr3_4:77830550-77830569 | None:intergenic | 35.0% | |
| !! | CTCTGCCATTTATTGTCTTT+TGG | + | chr3_4:77830548-77830567 | Msa0524350:intron | 35.0% |
| AGTCGCCAAAAGACAATAAA+TGG | - | chr3_4:77830556-77830575 | None:intergenic | 35.0% | |
| AACTATGTTGTCTGTATCAC+CGG | - | chr3_4:77830711-77830730 | None:intergenic | 35.0% | |
| AAATGGAAGAAATCCACATC+CGG | + | chr3_4:77830875-77830894 | Msa0524350:intron | 35.0% | |
| !!! | TCACATCTTAAGCTAGCTTT+TGG | + | chr3_4:77830945-77830964 | Msa0524350:intron | 35.0% |
| GTGTCATCAATGACAGATTA+TGG | - | chr3_4:77831764-77831783 | None:intergenic | 35.0% | |
| !! | TTAATTTGCTAAACCAGGAG+GGG | - | chr3_4:77831892-77831911 | None:intergenic | 35.0% |
| AGCTGTGTAAATCTCATGTA+TGG | + | chr3_4:77832312-77832331 | Msa0524350:intron | 35.0% | |
| TGCATAGCTACCAATTAGTA+AGG | - | chr3_4:77832366-77832385 | None:intergenic | 35.0% | |
| AATGTGCATAAGCATGCATA+AGG | + | chr3_4:77832385-77832404 | Msa0524350:intron | 35.0% | |
| ! | GTACATTCTTTGGCTTAGAA+GGG | + | chr3_4:77832452-77832471 | Msa0524350:intron | 35.0% |
| TAAATCTTTGCAATCATGGC+AGG | + | chr3_4:77832741-77832760 | Msa0524350:CDS | 35.0% | |
| GCCGTTATTCCAAAGATAAA+TGG | - | chr3_4:77832848-77832867 | None:intergenic | 35.0% | |
| GTCTTCTGTTCCATATTTGA+AGG | + | chr3_4:77833063-77833082 | Msa0524350:CDS | 35.0% | |
| ACATATTCATCCAGTAAGCT+TGG | - | chr3_4:77833097-77833116 | None:intergenic | 35.0% | |
| ATCAAGATTCAATTCTGTGC+AGG | + | chr3_4:77833144-77833163 | Msa0524350:CDS | 35.0% | |
| AGCAATCAGTAAAGGATGAA+CGG | - | chr3_4:77833183-77833202 | None:intergenic | 35.0% | |
| TAAACAAAATGCATATGGCC+TGG | - | chr3_4:77833211-77833230 | None:intergenic | 35.0% | |
| !!! | TAACTGCTGTCGTTTTTTAC+AGG | + | chr3_4:77833262-77833281 | Msa0524350:intron | 35.0% |
| AGAAGTTCAGCATTGTCTAA+GGG | - | chr3_4:77833314-77833333 | None:intergenic | 35.0% | |
| AAGAAGTTCAGCATTGTCTA+AGG | - | chr3_4:77833315-77833334 | None:intergenic | 35.0% | |
| AATTAACTGAGAAGGCAAGA+AGG | + | chr3_4:77833428-77833447 | Msa0524350:intron | 35.0% | |
| CAACTAAAATAAACCGGAAC+TGG | + | chr3_4:77833489-77833508 | Msa0524350:intron | 35.0% | |
| CTAGGAAGTTGTATACTCTA+GGG | - | chr3_4:77833653-77833672 | None:intergenic | 35.0% | |
| CTTTACAGTTTCTTCTCTAG+AGG | - | chr3_4:77833895-77833914 | None:intergenic | 35.0% | |
| ! | CTCTAGAGAAGAAACTGTAA+AGG | + | chr3_4:77833893-77833912 | Msa0524350:intron | 35.0% |
| ACAGAAAGTTGCTTGCTTTA+TGG | - | chr3_4:77833932-77833951 | None:intergenic | 35.0% | |
| ! | TTTATGTTAAGCTTGATGGC+AGG | - | chr3_4:77834051-77834070 | None:intergenic | 35.0% |
| !!! | CAAAGCTTTTGTTTCTATGG+AGG | + | chr3_4:77834194-77834213 | Msa0524350:intron | 35.0% |
| !!! | CTTTTGTTTCTATGGAGGAA+TGG | + | chr3_4:77834199-77834218 | Msa0524350:intron | 35.0% |
| !! | TTTGTTTCTATGGAGGAATG+GGG | + | chr3_4:77834201-77834220 | Msa0524350:intron | 35.0% |
| ATACTGCACAATGAATGCAA+AGG | - | chr3_4:77834333-77834352 | None:intergenic | 35.0% | |
| GTTTGTCTTCAATCACAGAA+AGG | - | chr3_4:77834556-77834575 | None:intergenic | 35.0% | |
| ! | GGGATGTAGGTAAAACATTT+TGG | + | chr3_4:77834628-77834647 | Msa0524350:intron | 35.0% |
| TATATGTAGTGTGGAATCTC+AGG | + | chr3_4:77834757-77834776 | Msa0524350:intron | 35.0% | |
| TTGATCAATGTAACTGACAG+TGG | + | chr3_4:77834818-77834837 | Msa0524350:CDS | 35.0% | |
| AGAGAATCACGTTTGTTTGG+CGG | + | chr3_4:77827059-77827078 | Msa0524350:five_prime_UTR | 40.0% | |
| ! | AACTTGAAGCATTATGCGAG+AGG | + | chr3_4:77827105-77827124 | Msa0524350:CDS | 40.0% |
| CTAGCAAGCATCAAAGCATA+AGG | - | chr3_4:77827248-77827267 | None:intergenic | 40.0% | |
| GTCACAAAAGGTTGTAACTC+AGG | - | chr3_4:77827470-77827489 | None:intergenic | 40.0% | |
| ATGAGAGAAGCAGTCACAAA+AGG | - | chr3_4:77827482-77827501 | None:intergenic | 40.0% | |
| TAGATTCTTTGACAAGGTCG+CGG | - | chr3_4:77827556-77827575 | None:intergenic | 40.0% | |
| ATCTACCAACTTCTTGAGTC+AGG | + | chr3_4:77827571-77827590 | Msa0524350:CDS | 40.0% | |
| TAATCTATCTAGGCAACTCC+CGG | + | chr3_4:77827663-77827682 | Msa0524350:CDS | 40.0% | |
| GCTTATTTCCGAGATGAATC+AGG | + | chr3_4:77827719-77827738 | Msa0524350:CDS | 40.0% | |
| CAGTTCTTGCAATTGACTGA+TGG | - | chr3_4:77828181-77828200 | None:intergenic | 40.0% | |
| CATCAGTCAATTGCAAGAAC+TGG | + | chr3_4:77828179-77828198 | Msa0524350:CDS | 40.0% | |
| CAGTGTAGAAGGAATAAGGT+AGG | - | chr3_4:77828327-77828346 | None:intergenic | 40.0% | |
| CTACCTTATTCCTTCTACAC+TGG | + | chr3_4:77828325-77828344 | Msa0524350:intron | 40.0% | |
| GAACCAGTGTAGAAGGAATA+AGG | - | chr3_4:77828331-77828350 | None:intergenic | 40.0% | |
| ! | AAAACTGATTTCCAGGGAGA+TGG | - | chr3_4:77828389-77828408 | None:intergenic | 40.0% |
| ! | ATCTCCCTGGAAATCAGTTT+TGG | + | chr3_4:77828388-77828407 | Msa0524350:CDS | 40.0% |
| ! | TCCTCCAAAACTGATTTCCA+GGG | - | chr3_4:77828395-77828414 | None:intergenic | 40.0% |
| AGTGGGCCAAAAACTTAGAA+CGG | - | chr3_4:77828779-77828798 | None:intergenic | 40.0% | |
| !! | TTTTTGGCCCACTTAATGAC+TGG | + | chr3_4:77828786-77828805 | Msa0524350:CDS | 40.0% |
| ! | CTTTGGTTCCAGTCATTAAG+TGG | - | chr3_4:77828797-77828816 | None:intergenic | 40.0% |
| AGGCGTTACAATGCAAAACA+AGG | - | chr3_4:77828865-77828884 | None:intergenic | 40.0% | |
| TTTGCATTGTAACGCCTAAC+TGG | + | chr3_4:77828868-77828887 | Msa0524350:intron | 40.0% | |
| TCTATATCTGTACGAGAGAG+AGG | - | chr3_4:77828993-77829012 | None:intergenic | 40.0% | |
| TCTATATCTGTACGAGAGAG+AGG | - | chr3_4:77828993-77829012 | None:intergenic | 40.0% | |
| CTGATGCGGTATGTCAAAAT+AGG | + | chr3_4:77829332-77829351 | Msa0524350:intron | 40.0% | |
| AACTATGCAGAGTCCTTCAA+GGG | - | chr3_4:77829567-77829586 | None:intergenic | 40.0% | |
| !!! | ACAGCTTGTTTTGGTGATCT+AGG | + | chr3_4:77829631-77829650 | Msa0524350:intron | 40.0% |
| ! | TTGGTGATCTAGGTGATGAT+TGG | + | chr3_4:77829641-77829660 | Msa0524350:intron | 40.0% |
| TGTATTCGTTAACATCCCTG+AGG | - | chr3_4:77829888-77829907 | None:intergenic | 40.0% | |
| ! | TGTTAGGTTGTGAATTTGGG+TGG | + | chr3_4:77829916-77829935 | Msa0524350:intron | 40.0% |
| !! | ATATTCACGGATTAGGCATC+AGG | + | chr3_4:77830084-77830103 | Msa0524350:intron | 40.0% |
| !! | TATTCACGGATTAGGCATCA+GGG | + | chr3_4:77830085-77830104 | Msa0524350:intron | 40.0% |
| AATTGAACAACTCGAGTGCA+GGG | - | chr3_4:77830119-77830138 | None:intergenic | 40.0% | |
| AAATTGAACAACTCGAGTGC+AGG | - | chr3_4:77830120-77830139 | None:intergenic | 40.0% | |
| ! | TGTATTTTATCCGCCAGTGT+AGG | + | chr3_4:77830166-77830185 | Msa0524350:intron | 40.0% |
| TAGAAGCTCTTGTTCAACCT+AGG | + | chr3_4:77830240-77830259 | Msa0524350:intron | 40.0% | |
| ! | TCAACCTAGGTTGAAGATCT+TGG | + | chr3_4:77830253-77830272 | Msa0524350:intron | 40.0% |
| CTAACCAAGATCTTCAACCT+AGG | - | chr3_4:77830260-77830279 | None:intergenic | 40.0% | |
| ! | CTAGGTTGAAGATCTTGGTT+AGG | + | chr3_4:77830258-77830277 | Msa0524350:intron | 40.0% |
| ! | TTTTTACACCCTCTTGGAAC+TGG | - | chr3_4:77830410-77830429 | None:intergenic | 40.0% |
| ! | ATTGGGTTTTTACACCCTCT+TGG | - | chr3_4:77830416-77830435 | None:intergenic | 40.0% |
| !! | TTTTGGCGACTACTTTTCGT+TGG | + | chr3_4:77830565-77830584 | Msa0524350:intron | 40.0% |
| !! | TTTGGCGACTACTTTTCGTT+GGG | + | chr3_4:77830566-77830585 | Msa0524350:intron | 40.0% |
| AGAATAGGGAATCACACCAT+AGG | - | chr3_4:77830610-77830629 | None:intergenic | 40.0% | |
| TAAAAGAATAGGACAGCACG+CGG | - | chr3_4:77830673-77830692 | None:intergenic | 40.0% | |
| GTTCGTATACTGTAATGTCC+CGG | + | chr3_4:77830728-77830747 | Msa0524350:intron | 40.0% | |
| CGCTAACTCATAAGAAAGTC+CGG | - | chr3_4:77830897-77830916 | None:intergenic | 40.0% | |
| CACTACTATGCTTCCATCAT+AGG | + | chr3_4:77831693-77831712 | Msa0524350:intron | 40.0% | |
| ACTATGCTTCCATCATAGGT+TGG | + | chr3_4:77831697-77831716 | Msa0524350:intron | 40.0% | |
| TCTCTCATCAATCATCACAC+AGG | + | chr3_4:77831794-77831813 | Msa0524350:intron | 40.0% | |
| !! | CATGAGTTTTGTCGTCTTCT+TGG | + | chr3_4:77832081-77832100 | Msa0524350:intron | 40.0% |
| !! | AGTTTTGTCGTCTTCTTGGT+CGG | + | chr3_4:77832085-77832104 | Msa0524350:intron | 40.0% |
| TTCAGAGTGAATTACCAGGT+AGG | + | chr3_4:77832108-77832127 | Msa0524350:intron | 40.0% | |
| AAACTGCACAAAAACCTACC+TGG | - | chr3_4:77832125-77832144 | None:intergenic | 40.0% | |
| ! | GTGCAGTTTTACTCCATTTG+TGG | + | chr3_4:77832136-77832155 | Msa0524350:intron | 40.0% |
| CCATCGTGGTGAAATATGAT+TGG | - | chr3_4:77832228-77832247 | None:intergenic | 40.0% | |
| CCAATCATATTTCACCACGA+TGG | + | chr3_4:77832225-77832244 | Msa0524350:intron | 40.0% | |
| ATTATGATGTGGCTAGATGG+TGG | + | chr3_4:77832276-77832295 | Msa0524350:intron | 40.0% | |
| TAAGCATGCATAAGGACATG+AGG | + | chr3_4:77832393-77832412 | Msa0524350:intron | 40.0% | |
| CATAAGGACATGAGGTTCAT+GGG | + | chr3_4:77832401-77832420 | Msa0524350:intron | 40.0% | |
| ATAAGGACATGAGGTTCATG+GGG | + | chr3_4:77832402-77832421 | Msa0524350:intron | 40.0% | |
| ! | GGTACATTCTTTGGCTTAGA+AGG | + | chr3_4:77832451-77832470 | Msa0524350:intron | 40.0% |
| ! | AGTTGATACCTTCATGTCAG+TGG | + | chr3_4:77832993-77833012 | Msa0524350:intron | 40.0% |
| GTTGATACCTTCATGTCAGT+GGG | + | chr3_4:77832994-77833013 | Msa0524350:intron | 40.0% | |
| AACAGTGTCTACTACCTGTT+AGG | + | chr3_4:77833022-77833041 | Msa0524350:CDS | 40.0% | |
| ACAGTGTCTACTACCTGTTA+GGG | + | chr3_4:77833023-77833042 | Msa0524350:CDS | 40.0% | |
| GAAGTTCAGCATTGTCTAAG+GGG | - | chr3_4:77833313-77833332 | None:intergenic | 40.0% | |
| AGACAATGCTGAACTTCTTC+AGG | + | chr3_4:77833316-77833335 | Msa0524350:CDS | 40.0% | |
| ! | TGAGTTTTCACTTCCAGTTC+CGG | - | chr3_4:77833505-77833524 | None:intergenic | 40.0% |
| CCTAGGAAGTTGTATACTCT+AGG | - | chr3_4:77833654-77833673 | None:intergenic | 40.0% | |
| CCTAGAGTATACAACTTCCT+AGG | + | chr3_4:77833651-77833670 | Msa0524350:intron | 40.0% | |
| GAGAAGAAACTGTAAAGGAG+AGG | + | chr3_4:77833898-77833917 | Msa0524350:intron | 40.0% | |
| GAAAGTTGCTTGCTTTATGG+AGG | - | chr3_4:77833929-77833948 | None:intergenic | 40.0% | |
| ! | CAAGCTTGTTCAAAACTGTG+TGG | - | chr3_4:77833992-77834011 | None:intergenic | 40.0% |
| AATGGTGAATTGGATCTTCC+TGG | + | chr3_4:77834070-77834089 | Msa0524350:intron | 40.0% | |
| AAATCAGAGTGGTCTAAACC+AGG | - | chr3_4:77834091-77834110 | None:intergenic | 40.0% | |
| ! | AAGGCCAACCTTTTCAACTA+AGG | + | chr3_4:77834125-77834144 | Msa0524350:intron | 40.0% |
| ! | AGGCCAACCTTTTCAACTAA+GGG | + | chr3_4:77834126-77834145 | Msa0524350:intron | 40.0% |
| ATAGGAAAGGGCAAGATTAC+AGG | + | chr3_4:77834514-77834533 | Msa0524350:intron | 40.0% | |
| TGATTGAAGACAAACTCGCT+TGG | + | chr3_4:77834561-77834580 | Msa0524350:CDS | 40.0% | |
| TAAAACAATGCACGGGATGT+AGG | + | chr3_4:77834615-77834634 | Msa0524350:CDS | 40.0% | |
| ! | GCTCCTACCTTTTCATCTAT+TGG | + | chr3_4:77834650-77834669 | Msa0524350:intron | 40.0% |
| CAGAACTCGAGCTGAAATTT+CGG | - | chr3_4:77834795-77834814 | None:intergenic | 40.0% | |
| CGAGAGGCTTTACAATTCAC+AGG | + | chr3_4:77827121-77827140 | Msa0524350:CDS | 45.0% | |
| CTCTGTCGAGTCACCAAATT+TGG | + | chr3_4:77827509-77827528 | Msa0524350:CDS | 45.0% | |
| GTCGAGTCACCAAATTTGGA+TGG | + | chr3_4:77827513-77827532 | Msa0524350:CDS | 45.0% | |
| AAACCAATGGCATAATGGCC+GGG | - | chr3_4:77827684-77827703 | None:intergenic | 45.0% | |
| CAAACCAATGGCATAATGGC+CGG | - | chr3_4:77827685-77827704 | None:intergenic | 45.0% | |
| !! | TACCTGCAACAAAGCATCGA+AGG | + | chr3_4:77827978-77827997 | Msa0524350:intron | 45.0% |
| !! | ACCTGCAACAAAGCATCGAA+GGG | + | chr3_4:77827979-77827998 | Msa0524350:intron | 45.0% |
| !! | AAGGGTAGCTTGCTCCTTTA+GGG | + | chr3_4:77827997-77828016 | Msa0524350:intron | 45.0% |
| TTGGGCCAGTTGAAGAATGA+TGG | + | chr3_4:77828061-77828080 | Msa0524350:intron | 45.0% | |
| ! | TGATTTTGTGGGGACATCTG+TGG | + | chr3_4:77828233-77828252 | Msa0524350:CDS | 45.0% |
| AGATGAGTTTGGCACAGTTC+AGG | + | chr3_4:77828266-77828285 | Msa0524350:CDS | 45.0% | |
| AGGGAGATGGAATCTGCAAA+CGG | - | chr3_4:77828376-77828395 | None:intergenic | 45.0% | |
| !! | TCCCTGGAAATCAGTTTTGG+AGG | + | chr3_4:77828391-77828410 | Msa0524350:CDS | 45.0% |
| ! | GTCCTCCAAAACTGATTTCC+AGG | - | chr3_4:77828396-77828415 | None:intergenic | 45.0% |
| CGAAAGAGGGGACTTTGTAA+TGG | - | chr3_4:77828453-77828472 | None:intergenic | 45.0% | |
| TACAAAGTCCCCTCTTTCGA+AGG | + | chr3_4:77828454-77828473 | Msa0524350:CDS | 45.0% | |
| ! | CTATTTTCCTTTCCAGGCAC+TGG | + | chr3_4:77828698-77828717 | Msa0524350:intron | 45.0% |
| !! | TGCTGCCCGTTCTAAGTTTT+TGG | + | chr3_4:77828770-77828789 | Msa0524350:CDS | 45.0% |
| GTGGGCCAAAAACTTAGAAC+GGG | - | chr3_4:77828778-77828797 | None:intergenic | 45.0% | |
| ACCAAAGCAATCCTGCAAAC+AGG | + | chr3_4:77828810-77828829 | Msa0524350:CDS | 45.0% | |
| CCAAAGCAATCCTGCAAACA+GGG | + | chr3_4:77828811-77828830 | Msa0524350:CDS | 45.0% | |
| TATCTGTACGAGAGAGAGGA+GGG | - | chr3_4:77828989-77829008 | None:intergenic | 45.0% | |
| ATATCTGTACGAGAGAGAGG+AGG | - | chr3_4:77828990-77829009 | None:intergenic | 45.0% | |
| TTGAAGAGGAAGCCCTTGAA+TGG | + | chr3_4:77829452-77829471 | Msa0524350:intron | 45.0% | |
| ATCCTATGCCCACCATTCAA+GGG | - | chr3_4:77829467-77829486 | None:intergenic | 45.0% | |
| TTCAACTACGCAACCAACAC+CGG | - | chr3_4:77829522-77829541 | None:intergenic | 45.0% | |
| CAACTATGCAGAGTCCTTCA+AGG | - | chr3_4:77829568-77829587 | None:intergenic | 45.0% | |
| CTCTGCATAGTTGAATCCGT+AGG | + | chr3_4:77829575-77829594 | Msa0524350:intron | 45.0% | |
| GCTTCGATTGTTCGTGAGTA+GGG | + | chr3_4:77829792-77829811 | Msa0524350:intron | 45.0% | |
| ACTCTCATTTCCTACACTGG+CGG | - | chr3_4:77830179-77830198 | None:intergenic | 45.0% | |
| GGAACTCTCATTTCCTACAC+TGG | - | chr3_4:77830182-77830201 | None:intergenic | 45.0% | |
| !! | TTGGCGACTACTTTTCGTTG+GGG | + | chr3_4:77830567-77830586 | Msa0524350:intron | 45.0% |
| CCATAGGACAAATCCAGAGA+AGG | - | chr3_4:77830594-77830613 | None:intergenic | 45.0% | |
| CCTTCTCTGGATTTGTCCTA+TGG | + | chr3_4:77830591-77830610 | Msa0524350:intron | 45.0% | |
| AAAAGAATAGGACAGCACGC+GGG | - | chr3_4:77830672-77830691 | None:intergenic | 45.0% | |
| CTCATAAGAAAGTCCGGATG+TGG | - | chr3_4:77830891-77830910 | None:intergenic | 45.0% | |
| GATGGCATTCCAACCTATGA+TGG | - | chr3_4:77831709-77831728 | None:intergenic | 45.0% | |
| ! | CTGTCATTGATGACACTGTG+TGG | + | chr3_4:77831768-77831787 | Msa0524350:intron | 45.0% |
| AATCCAAAGTAAACCCCTCC+TGG | + | chr3_4:77831876-77831895 | Msa0524350:intron | 45.0% | |
| AAACCAGGAGGGGTTTACTT+TGG | - | chr3_4:77831882-77831901 | None:intergenic | 45.0% | |
| !!! | TTTGACTGTTTTGGGGAAGC+AGG | + | chr3_4:77832036-77832055 | Msa0524350:intron | 45.0% |
| TCGGTTCAGAGTGAATTACC+AGG | + | chr3_4:77832104-77832123 | Msa0524350:intron | 45.0% | |
| GCATAAGGACATGAGGTTCA+TGG | + | chr3_4:77832400-77832419 | Msa0524350:intron | 45.0% | |
| TAAGGACATGAGGTTCATGG+GGG | + | chr3_4:77832403-77832422 | Msa0524350:intron | 45.0% | |
| GTTGTCTGAGCTTGTCAATG+TGG | + | chr3_4:77832675-77832694 | Msa0524350:intron | 45.0% | |
| TCTGAGCTTGTCAATGTGGA+AGG | + | chr3_4:77832679-77832698 | Msa0524350:CDS | 45.0% | |
| ATGTGGAAGGCTATAGCGAT+TGG | + | chr3_4:77832692-77832711 | Msa0524350:CDS | 45.0% | |
| TGGAACAGAAGACACCAATC+TGG | - | chr3_4:77833056-77833075 | None:intergenic | 45.0% | |
| GGTGCATCACCCTTCAAATA+TGG | - | chr3_4:77833076-77833095 | None:intergenic | 45.0% | |
| TGGAAGGCAGCAATCAGTAA+AGG | - | chr3_4:77833191-77833210 | None:intergenic | 45.0% | |
| ! | TTTACTGATTGCTGCCTTCC+AGG | + | chr3_4:77833190-77833209 | Msa0524350:intron | 45.0% |
| CAAAATGCATATGGCCTGGA+AGG | - | chr3_4:77833207-77833226 | None:intergenic | 45.0% | |
| !!! | TGCTGTCGTTTTTTACAGGC+TGG | + | chr3_4:77833266-77833285 | Msa0524350:intron | 45.0% |
| AAGGGGTTCTCAAGATCATC+AGG | - | chr3_4:77833296-77833315 | None:intergenic | 45.0% | |
| GAAGGCAAGAAGGATTCCAA+AGG | + | chr3_4:77833438-77833457 | Msa0524350:intron | 45.0% | |
| TTTAATCTTGGTGGGAGCTG+TGG | + | chr3_4:77833806-77833825 | Msa0524350:intron | 45.0% | |
| GGAGCTGTGGAATGCTATAT+TGG | + | chr3_4:77833819-77833838 | Msa0524350:intron | 45.0% | |
| ! | AACTGTGTGGCTAGTTGCTA+TGG | - | chr3_4:77833979-77833998 | None:intergenic | 45.0% |
| ! | GGCCAACCTTTTCAACTAAG+GGG | + | chr3_4:77834127-77834146 | Msa0524350:intron | 45.0% |
| GACCCCTTAGTTGAAAAGGT+TGG | - | chr3_4:77834132-77834151 | None:intergenic | 45.0% | |
| TGGTGACCCCTTAGTTGAAA+AGG | - | chr3_4:77834136-77834155 | None:intergenic | 45.0% | |
| GCCTGTCCTGCAAATATACA+CGG | + | chr3_4:77834388-77834407 | Msa0524350:CDS | 45.0% | |
| ACCGTGTATATTTGCAGGAC+AGG | - | chr3_4:77834392-77834411 | None:intergenic | 45.0% | |
| TCCTGCAAATATACACGGTG+TGG | + | chr3_4:77834393-77834412 | Msa0524350:intron | 45.0% | |
| ACCACACCGTGTATATTTGC+AGG | - | chr3_4:77834397-77834416 | None:intergenic | 45.0% | |
| GAGTACACAGTCAGGTATAC+TGG | + | chr3_4:77834840-77834859 | Msa0524350:CDS | 45.0% | |
| !! | AAAAAATTAAAATAGAAAAT+CGG | - | chr3_4:77830636-77830655 | None:intergenic | 5.0% |
| GAATCACGTTTGTTTGGCGG+CGG | + | chr3_4:77827062-77827081 | Msa0524350:five_prime_UTR | 50.0% | |
| !! | GGCGAGATAGTTGATGAGGT+AGG | - | chr3_4:77827438-77827457 | None:intergenic | 50.0% |
| ! | TGGTGGCGAGATAGTTGATG+AGG | - | chr3_4:77827442-77827461 | None:intergenic | 50.0% |
| ATCAACTATCTCGCCACCAG+AGG | + | chr3_4:77827443-77827462 | Msa0524350:CDS | 50.0% | |
| TTGTAACTCAGGTCCTCTGG+TGG | - | chr3_4:77827459-77827478 | None:intergenic | 50.0% | |
| AGGTTGTAACTCAGGTCCTC+TGG | - | chr3_4:77827462-77827481 | None:intergenic | 50.0% | |
| TGGTGACTCGACAGAGAAGT+TGG | - | chr3_4:77827505-77827524 | None:intergenic | 50.0% | |
| CAGCACCTGACTCAAGAAGT+TGG | - | chr3_4:77827579-77827598 | None:intergenic | 50.0% | |
| GAGACAGGACACAGATGTCT+AGG | - | chr3_4:77827943-77827962 | None:intergenic | 50.0% | |
| AGACATCTGTGTCCTGTCTC+AGG | + | chr3_4:77827943-77827962 | Msa0524350:intron | 50.0% | |
| ! | ACCCTTCGATGCTTTGTTGC+AGG | - | chr3_4:77827983-77828002 | None:intergenic | 50.0% |
| !! | GAAGGGTAGCTTGCTCCTTT+AGG | + | chr3_4:77827996-77828015 | Msa0524350:intron | 50.0% |
| GTTTGCAGATTCCATCTCCC+TGG | + | chr3_4:77828375-77828394 | Msa0524350:intron | 50.0% | |
| AAAGTCCCCTCTTTCGAAGG+AGG | + | chr3_4:77828457-77828476 | Msa0524350:CDS | 50.0% | |
| TACGGACCTCCTTCGAAAGA+GGG | - | chr3_4:77828466-77828485 | None:intergenic | 50.0% | |
| CTTAGAACGGGCAGCATCAT+TGG | - | chr3_4:77828766-77828785 | None:intergenic | 50.0% | |
| CCCTGTTTGCAGGATTGCTT+TGG | - | chr3_4:77828814-77828833 | None:intergenic | 50.0% | |
| CAATACCTTGCCCTGTTTGC+AGG | - | chr3_4:77828824-77828843 | None:intergenic | 50.0% | |
| ATCTGTACGAGAGAGAGGAG+GGG | - | chr3_4:77828988-77829007 | None:intergenic | 50.0% | |
| AAGAGGAAGCCCTTGAATGG+TGG | + | chr3_4:77829455-77829474 | Msa0524350:intron | 50.0% | |
| AGAGGAAGCCCTTGAATGGT+GGG | + | chr3_4:77829456-77829475 | Msa0524350:intron | 50.0% | |
| GATCCTATGCCCACCATTCA+AGG | - | chr3_4:77829468-77829487 | None:intergenic | 50.0% | |
| ATCGTTGTGGGTGAACCCAT+GGG | + | chr3_4:77829485-77829504 | Msa0524350:intron | 50.0% | |
| ATCCGTAGGCTGTTACATGC+TGG | + | chr3_4:77829589-77829608 | Msa0524350:intron | 50.0% | |
| CACCAGCATGTAACAGCCTA+CGG | - | chr3_4:77829594-77829613 | None:intergenic | 50.0% | |
| AGGCTGTTACATGCTGGTGT+TGG | + | chr3_4:77829595-77829614 | Msa0524350:intron | 50.0% | |
| CGCTTCGATTGTTCGTGAGT+AGG | + | chr3_4:77829791-77829810 | Msa0524350:intron | 50.0% | |
| CCTGAGGCAAACCCACATAA+GGG | - | chr3_4:77829872-77829891 | None:intergenic | 50.0% | |
| CCTTATGTGGGTTTGCCTCA+GGG | + | chr3_4:77829870-77829889 | Msa0524350:intron | 50.0% | |
| AAATCTATGCAACGGACGCG+TGG | - | chr3_4:77830346-77830365 | None:intergenic | 50.0% | |
| ! | CACCCTCTTGGAACTGGTTT+GGG | - | chr3_4:77830404-77830423 | None:intergenic | 50.0% |
| ACACCCTCTTGGAACTGGTT+TGG | - | chr3_4:77830405-77830424 | None:intergenic | 50.0% | |
| TACGGCATGAGGAAGAGTGA+TGG | - | chr3_4:77830488-77830507 | None:intergenic | 50.0% | |
| GAAGGAAACTCTACGGCATG+AGG | - | chr3_4:77830499-77830518 | None:intergenic | 50.0% | |
| GTGCAGGGAAGGAAACTCTA+CGG | - | chr3_4:77830506-77830525 | None:intergenic | 50.0% | |
| GTTTCCTTCCCTGCACTTCT+CGG | + | chr3_4:77830510-77830529 | Msa0524350:intron | 50.0% | |
| ! | TTTTCGTTGGGGACCTTCTC+TGG | + | chr3_4:77830578-77830597 | Msa0524350:intron | 50.0% |
| AAAGAATAGGACAGCACGCG+GGG | - | chr3_4:77830671-77830690 | None:intergenic | 50.0% | |
| AAGGACATGAGGTTCATGGG+GGG | + | chr3_4:77832404-77832423 | Msa0524350:intron | 50.0% | |
| CAGGTAGTAGACACTGTTGC+TGG | - | chr3_4:77833020-77833039 | None:intergenic | 50.0% | |
| TCTACTACCTGTTAGGGCTG+TGG | + | chr3_4:77833029-77833048 | Msa0524350:CDS | 50.0% | |
| GGCAAGAAGGATTCCAAAGG+AGG | + | chr3_4:77833441-77833460 | Msa0524350:intron | 50.0% | |
| TGACAGTGGAGTACACAGTC+AGG | + | chr3_4:77834832-77834851 | Msa0524350:CDS | 50.0% | |
| ACTCCCGGCCATTATGCCAT+TGG | + | chr3_4:77827678-77827697 | Msa0524350:CDS | 55.0% | |
| AACCAGCATTCGCCTGAGAC+AGG | - | chr3_4:77827958-77827977 | None:intergenic | 55.0% | |
| ACGGACCTCCTTCGAAAGAG+GGG | - | chr3_4:77828465-77828484 | None:intergenic | 55.0% | |
| GTACGGACCTCCTTCGAAAG+AGG | - | chr3_4:77828467-77828486 | None:intergenic | 55.0% | |
| AAGCACTCCAGTGCCTGGAA+AGG | - | chr3_4:77828708-77828727 | None:intergenic | 55.0% | |
| !! | TTTCCAGGCACTGGAGTGCT+TGG | + | chr3_4:77828707-77828726 | Msa0524350:intron | 55.0% |
| GCAATCCTGCAAACAGGGCA+AGG | + | chr3_4:77828816-77828835 | Msa0524350:CDS | 55.0% | |
| TCTGTACGAGAGAGAGGAGG+GGG | - | chr3_4:77828987-77829006 | None:intergenic | 55.0% | |
| !! | AGCCCTTGAATGGTGGGCAT+AGG | + | chr3_4:77829462-77829481 | Msa0524350:intron | 55.0% |
| ! | TGGTGGGCATAGGATCGTTG+TGG | + | chr3_4:77829472-77829491 | Msa0524350:intron | 55.0% |
| GGTGGGCATAGGATCGTTGT+GGG | + | chr3_4:77829473-77829492 | Msa0524350:intron | 55.0% | |
| GATCGTTGTGGGTGAACCCA+TGG | + | chr3_4:77829484-77829503 | Msa0524350:intron | 55.0% | |
| TCGTTGTGGGTGAACCCATG+GGG | + | chr3_4:77829486-77829505 | Msa0524350:intron | 55.0% | |
| CCGGCAAGTAACAACCCCAT+GGG | - | chr3_4:77829503-77829522 | None:intergenic | 55.0% | |
| ! | CCCATGGGGTTGTTACTTGC+CGG | + | chr3_4:77829500-77829519 | Msa0524350:intron | 55.0% |
| ACCGGCAAGTAACAACCCCA+TGG | - | chr3_4:77829504-77829523 | None:intergenic | 55.0% | |
| ! | GGGTTGTTACTTGCCGGTGT+TGG | + | chr3_4:77829506-77829525 | Msa0524350:intron | 55.0% |
| CCTTCAAGGGACGCTTGCAA+TGG | - | chr3_4:77829554-77829573 | None:intergenic | 55.0% | |
| CCATTGCAAGCGTCCCTTGA+AGG | + | chr3_4:77829551-77829570 | Msa0524350:intron | 55.0% | |
| CCCTTATGTGGGTTTGCCTC+AGG | + | chr3_4:77829869-77829888 | Msa0524350:intron | 55.0% | |
| CCCTGAGGCAAACCCACATA+AGG | - | chr3_4:77829873-77829892 | None:intergenic | 55.0% | |
| GGCCCAAACCAGTTCCAAGA+GGG | + | chr3_4:77830399-77830418 | Msa0524350:intron | 55.0% | |
| AAGAATAGGACAGCACGCGG+GGG | - | chr3_4:77830670-77830689 | None:intergenic | 55.0% | |
| AGGACATGAGGTTCATGGGG+GGG | + | chr3_4:77832405-77832424 | Msa0524350:intron | 55.0% | |
| TTGCTGGCCCACTGACATGA+AGG | - | chr3_4:77833004-77833023 | None:intergenic | 55.0% | |
| ATCTGGACCACAGCCCTAAC+AGG | - | chr3_4:77833039-77833058 | None:intergenic | 55.0% | |
| GTTAGGGCTGTGGTCCAGAT+TGG | + | chr3_4:77833039-77833058 | Msa0524350:CDS | 55.0% | |
| GGGTGATGCACCAAGCTTAC+TGG | + | chr3_4:77833084-77833103 | Msa0524350:CDS | 55.0% | |
| TCACGTTTGTTTGGCGGCGG+CGG | + | chr3_4:77827065-77827084 | Msa0524350:five_prime_UTR | 60.0% | |
| GTCCTGTCTCAGGCGAATGC+TGG | + | chr3_4:77827953-77827972 | Msa0524350:intron | 60.0% | |
| TGTACGAGAGAGAGGAGGGG+GGG | - | chr3_4:77828985-77829004 | None:intergenic | 60.0% | |
| CTGTACGAGAGAGAGGAGGG+GGG | - | chr3_4:77828986-77829005 | None:intergenic | 60.0% | |
| CGGCCCAAACCAGTTCCAAG+AGG | + | chr3_4:77830398-77830417 | Msa0524350:intron | 60.0% | |
| ! | CCAACCGAGAAGTGCAGGGA+AGG | - | chr3_4:77830517-77830536 | None:intergenic | 60.0% |
| CCTTCCCTGCACTTCTCGGT+TGG | + | chr3_4:77830514-77830533 | Msa0524350:intron | 60.0% | |
| ! | GTCGCCAACCGAGAAGTGCA+GGG | - | chr3_4:77830521-77830540 | None:intergenic | 60.0% |
| ! | AGTCGCCAACCGAGAAGTGC+AGG | - | chr3_4:77830522-77830541 | None:intergenic | 60.0% |
| GGACATGAGGTTCATGGGGG+GGG | + | chr3_4:77832406-77832425 | Msa0524350:intron | 60.0% | |
| GACATGAGGTTCATGGGGGG+GGG | + | chr3_4:77832407-77832426 | Msa0524350:intron | 60.0% | |
| ACATGAGGTTCATGGGGGGG+GGG | + | chr3_4:77832408-77832427 | Msa0524350:intron | 60.0% | |
| GCACCAAGCACTCCAGTGCC+TGG | - | chr3_4:77828713-77828732 | None:intergenic | 65.0% | |
| GTACGAGAGAGAGGAGGGGG+GGG | - | chr3_4:77828984-77829003 | None:intergenic | 65.0% | |
| CATGAGGTTCATGGGGGGGG+GGG | + | chr3_4:77832409-77832428 | Msa0524350:intron | 65.0% | |
| ATGAGGTTCATGGGGGGGGG+GGG | + | chr3_4:77832410-77832429 | Msa0524350:intron | 65.0% | |
| ! | GGGGGGGGGGGTACATTCTT+TGG | + | chr3_4:77832442-77832461 | Msa0524350:intron | 65.0% |
| GAGAGAGAGGAGGGGGGGGA+GGG | - | chr3_4:77828980-77828999 | None:intergenic | 70.0% | |
| TGAGGTTCATGGGGGGGGGG+GGG | + | chr3_4:77832411-77832430 | Msa0524350:intron | 70.0% | |
| GTTTGGCGGCGGCGGTGCGA+TGG | + | chr3_4:77827073-77827092 | Msa0524350:exon | 75.0% | |
| CGGCGGCGGTGCGATGGAGT+TGG | + | chr3_4:77827079-77827098 | Msa0524350:exon | 75.0% | |
| CGAGAGAGAGGAGGGGGGGG+AGG | - | chr3_4:77828981-77829000 | None:intergenic | 75.0% | |
| GAGGTTCATGGGGGGGGGGG+GGG | + | chr3_4:77832412-77832431 | Msa0524350:intron | 75.0% | |
| AGGTTCATGGGGGGGGGGGG+GGG | + | chr3_4:77832413-77832432 | Msa0524350:intron | 75.0% | |
| ! | GGTTCATGGGGGGGGGGGGG+GGG | + | chr3_4:77832414-77832433 | Msa0524350:intron | 80.0% |
| ! | GTTCATGGGGGGGGGGGGGG+GGG | + | chr3_4:77832415-77832434 | Msa0524350:intron | 80.0% |
| ! | TTCATGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832416-77832435 | Msa0524350:intron | 80.0% |
| ! | TCATGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832417-77832436 | Msa0524350:intron | 85.0% |
| ! | CATGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832418-77832437 | Msa0524350:intron | 90.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832419-77832438 | Msa0524350:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_4:77832420-77832439 | Msa0524350:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 77826870 | 77834892 | 77826870 | ID=Msa0524350;Name=Msa0524350 |
| chr3_4 | mRNA | 77826870 | 77834892 | 77826870 | ID=Msa0524350-mRNA-1;Parent=Msa0524350;Name=Msa0524350-mRNA-1;_AED=0.22;_eAED=0.19;_QI=222|0.63|0.66|0.91|0.72|0.83|12|0|529 |
| chr3_4 | exon | 77826870 | 77827329 | 77826870 | ID=Msa0524350-mRNA-1:exon:22858;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77827432 | 77827740 | 77827432 | ID=Msa0524350-mRNA-1:exon:22859;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77828178 | 77828287 | 77828178 | ID=Msa0524350-mRNA-1:exon:22860;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77828383 | 77828478 | 77828383 | ID=Msa0524350-mRNA-1:exon:22861;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77828714 | 77828837 | 77828714 | ID=Msa0524350-mRNA-1:exon:22862;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77829266 | 77829339 | 77829266 | ID=Msa0524350-mRNA-1:exon:22863;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77832676 | 77832762 | 77832676 | ID=Msa0524350-mRNA-1:exon:22864;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77833013 | 77833165 | 77833013 | ID=Msa0524350-mRNA-1:exon:22865;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77833284 | 77833376 | 77833284 | ID=Msa0524350-mRNA-1:exon:22866;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77834350 | 77834409 | 77834350 | ID=Msa0524350-mRNA-1:exon:22867;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77834518 | 77834636 | 77834518 | ID=Msa0524350-mRNA-1:exon:22868;Parent=Msa0524350-mRNA-1 |
| chr3_4 | exon | 77834766 | 77834892 | 77834766 | ID=Msa0524350-mRNA-1:exon:22869;Parent=Msa0524350-mRNA-1 |
| chr3_4 | five_prime_UTR | 77826870 | 77827091 | 77826870 | ID=Msa0524350-mRNA-1:five_prime_utr;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77827092 | 77827329 | 77827092 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77827432 | 77827740 | 77827432 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77828178 | 77828287 | 77828178 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77828383 | 77828478 | 77828383 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77828714 | 77828837 | 77828714 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77829266 | 77829339 | 77829266 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77832676 | 77832762 | 77832676 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77833013 | 77833165 | 77833013 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77833284 | 77833376 | 77833284 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77834350 | 77834409 | 77834350 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77834518 | 77834636 | 77834518 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| chr3_4 | CDS | 77834766 | 77834892 | 77834766 | ID=Msa0524350-mRNA-1:cds;Parent=Msa0524350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
