Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406740 | XP_003599919.1 | 98.619 | 362 | 5 | 0 | 11 | 372 | 176 | 537 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406740 | sp|E0CTY1|GATA_VITVI | 82.825 | 361 | 62 | 0 | 11 | 371 | 184 | 544 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406740 | G7IZY8 | 98.619 | 362 | 5 | 0 | 11 | 372 | 176 | 537 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0085870 | Msa0406740 | 0.803595 | 3.235008e-49 | -8.615850e-47 |
| Msa0105210 | Msa0406740 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0173760 | Msa0406740 | 0.808386 | 3.176854e-50 | -8.615850e-47 |
| Msa0406740 | Msa0641450 | 0.823278 | 1.509982e-53 | -8.615850e-47 |
| Msa0406740 | Msa0789800 | 0.802642 | 5.092655e-49 | -8.615850e-47 |
| Msa0406740 | Msa1184730 | 0.818650 | 1.754961e-52 | -8.615850e-47 |
| Msa0406740 | Msa1238700 | 0.811541 | 6.648794e-51 | -8.615850e-47 |
| Msa0406740 | Msa1326000 | 0.801294 | 9.635178e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406740 | MtrunA17_Chr3g0097801 | 98.619 | 362 | 5 | 0 | 11 | 372 | 176 | 537 | 0.0 | 728 |
| Msa0406740 | MtrunA17_Chr2g0279961 | 32.000 | 350 | 200 | 7 | 14 | 355 | 269 | 588 | 1.23e-29 | 120 |
| Msa0406740 | MtrunA17_Chr3g0130801 | 29.545 | 352 | 195 | 10 | 12 | 350 | 337 | 648 | 1.61e-26 | 111 |
| Msa0406740 | MtrunA17_Chr8g0384851 | 29.545 | 352 | 195 | 10 | 12 | 350 | 274 | 585 | 1.59e-22 | 99.4 |
| Msa0406740 | MtrunA17_Chr8g0385461 | 40.179 | 112 | 65 | 1 | 6 | 117 | 287 | 396 | 2.52e-20 | 92.8 |
| Msa0406740 | MtrunA17_Chr8g0377701 | 38.849 | 139 | 82 | 2 | 14 | 152 | 184 | 319 | 3.88e-19 | 89.0 |
| Msa0406740 | MtrunA17_Chr1g0191741 | 26.902 | 368 | 199 | 17 | 14 | 359 | 101 | 420 | 7.00e-19 | 87.4 |
| Msa0406740 | MtrunA17_Chr8g0377651 | 32.653 | 196 | 119 | 4 | 14 | 199 | 183 | 375 | 5.69e-18 | 85.5 |
| Msa0406740 | MtrunA17_Chr4g0037521 | 26.166 | 386 | 200 | 12 | 5 | 355 | 164 | 499 | 1.02e-17 | 84.3 |
| Msa0406740 | MtrunA17_Chr8g0377681 | 25.130 | 386 | 199 | 15 | 14 | 366 | 180 | 508 | 1.73e-16 | 80.9 |
| Msa0406740 | MtrunA17_Chr8g0377691 | 36.691 | 139 | 85 | 2 | 14 | 152 | 183 | 318 | 2.74e-16 | 80.1 |
| Msa0406740 | MtrunA17_Chr8g0377641 | 34.028 | 144 | 92 | 2 | 9 | 152 | 175 | 315 | 1.52e-15 | 77.8 |
| Msa0406740 | MtrunA17_Chr4g0050371 | 49.333 | 75 | 38 | 0 | 14 | 88 | 147 | 221 | 3.47e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406740 | AT3G25660.1 | 80.780 | 359 | 69 | 0 | 11 | 369 | 177 | 535 | 0.0 | 566 |
| Msa0406740 | AT5G64440.1 | 28.212 | 358 | 209 | 9 | 11 | 355 | 267 | 589 | 2.55e-28 | 116 |
| Msa0406740 | AT5G07360.1 | 41.667 | 108 | 63 | 0 | 6 | 113 | 329 | 436 | 7.80e-21 | 94.7 |
| Msa0406740 | AT5G07360.3 | 41.667 | 108 | 63 | 0 | 6 | 113 | 329 | 436 | 7.80e-21 | 94.7 |
| Msa0406740 | AT5G07360.2 | 41.667 | 108 | 56 | 1 | 6 | 113 | 329 | 429 | 2.87e-19 | 90.1 |
| Msa0406740 | AT1G08980.1 | 54.430 | 79 | 36 | 0 | 14 | 92 | 102 | 180 | 1.23e-18 | 87.4 |
| Msa0406740 | AT4G34880.2 | 27.887 | 355 | 202 | 11 | 14 | 355 | 187 | 500 | 5.18e-17 | 82.8 |
| Msa0406740 | AT5G09420.1 | 24.625 | 333 | 206 | 10 | 14 | 334 | 145 | 444 | 1.45e-14 | 75.5 |
| Msa0406740 | AT3G17970.2 | 44.737 | 76 | 42 | 0 | 13 | 88 | 131 | 206 | 4.00e-11 | 64.7 |
| Msa0406740 | AT3G17970.1 | 44.737 | 76 | 42 | 0 | 13 | 88 | 131 | 206 | 5.03e-11 | 64.7 |
Find 122 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAACTGATAAATATTTA+TGG | 0.117160 | 3_2:+43514383 | None:intergenic |
| CCTTCAGCTGCTTATAAAAT+TGG | 0.189323 | 3_2:-43518410 | Msa0406740:intron |
| GACATTACAGGCAAATATTT+TGG | 0.199151 | 3_2:-43514289 | Msa0406740:three_prime_UTR |
| CCAACCCGTGGGATGTTTCT+AGG | 0.236054 | 3_2:-43520330 | Msa0406740:CDS |
| TACCAAATAGAAGGAAAATT+TGG | 0.254997 | 3_2:-43514316 | Msa0406740:three_prime_UTR |
| GGTTCATCGGTCGCTGATGC+TGG | 0.256956 | 3_2:-43520106 | Msa0406740:CDS |
| CTTGAAGCTATTCCTTATAA+TGG | 0.275796 | 3_2:+43518475 | None:intergenic |
| CTTGATGCCATTGGCTGCTT+TGG | 0.287138 | 3_2:-43520127 | Msa0406740:CDS |
| TGGCTGAAGCAGGTATGTTT+AGG | 0.296796 | 3_2:-43514350 | Msa0406740:three_prime_UTR |
| TGGTCACACATGATTGAATC+TGG | 0.337048 | 3_2:-43514269 | Msa0406740:three_prime_UTR |
| TGTCTCGCTATGATGGTATT+AGG | 0.343270 | 3_2:-43519428 | Msa0406740:intron |
| TCCCTTCCCCTTGTTATTCA+AGG | 0.343910 | 3_2:+43514426 | None:intergenic |
| TATGGGCGCGTCTCAAGATT+TGG | 0.346456 | 3_2:-43520172 | Msa0406740:CDS |
| CCCTTGAAAGGACTGAGAAT+TGG | 0.350069 | 3_2:-43519749 | Msa0406740:CDS |
| CCTGTTGGCCTGCAAATGAT+TGG | 0.354266 | 3_2:-43517433 | Msa0406740:CDS |
| CCATGTGGATTTATTGAGAA+TGG | 0.359058 | 3_2:-43517469 | Msa0406740:CDS |
| CATTGGCTGCTTTGGTTCAT+CGG | 0.365093 | 3_2:-43520119 | Msa0406740:CDS |
| ATTCTCCTCCATGCAATTGC+TGG | 0.372958 | 3_2:-43520082 | Msa0406740:CDS |
| ACGCTGCACCAATCATTTGC+AGG | 0.395748 | 3_2:+43517425 | None:intergenic |
| TTCTCCGTCTATGGGTGGGT+TGG | 0.399516 | 3_2:-43520463 | Msa0406740:CDS |
| AACAGGTGAGAACCATTATA+AGG | 0.404504 | 3_2:-43518487 | Msa0406740:intron |
| TCTCCGTCTATGGGTGGGTT+GGG | 0.408128 | 3_2:-43520462 | Msa0406740:intron |
| ACCAATTCTCAGTCCTTTCA+AGG | 0.410994 | 3_2:+43519748 | None:intergenic |
| GTAGGTTTGAAGCCAACATA+TGG | 0.418336 | 3_2:-43520190 | Msa0406740:CDS |
| AACTGCAGCTGCCGATCCTC+CGG | 0.421581 | 3_2:+43520291 | None:intergenic |
| GTTCAGTGTTACCAAATAGA+AGG | 0.422874 | 3_2:-43514325 | Msa0406740:three_prime_UTR |
| CCAATCATTTGCAGGCCAAC+AGG | 0.424765 | 3_2:+43517433 | None:intergenic |
| GGCTGAAGCAGGTATGTTTA+GGG | 0.424828 | 3_2:-43514349 | Msa0406740:three_prime_UTR |
| GATGAGCTTGACTCTCTCTA+TGG | 0.434831 | 3_2:-43519245 | Msa0406740:CDS |
| GAATCCCGAGCCAAAGGGTT+AGG | 0.438985 | 3_2:-43519221 | Msa0406740:CDS |
| GATCCTCCGGATGATCCTCC+TGG | 0.440465 | 3_2:+43520304 | None:intergenic |
| CAAGCTCATCAGCATAAACT+TGG | 0.447224 | 3_2:+43519258 | None:intergenic |
| TCAAAATGAGATAGAAAGTT+GGG | 0.450622 | 3_2:+43519797 | None:intergenic |
| GTTCATCGGTCGCTGATGCT+GGG | 0.451053 | 3_2:-43520105 | Msa0406740:CDS |
| GGGACATATGCCCTTTCAGC+TGG | 0.466577 | 3_2:-43518875 | Msa0406740:CDS |
| TAAAATGCGGTGGCTGAAGC+AGG | 0.466998 | 3_2:-43514360 | Msa0406740:three_prime_UTR |
| TAGGTAAATGTCAACCTAGC+TGG | 0.467203 | 3_2:-43517511 | Msa0406740:CDS |
| AGAACCTAACCCTTTGGCTC+GGG | 0.470303 | 3_2:+43519217 | None:intergenic |
| ACACTTGATCAATCTATAGC+TGG | 0.472209 | 3_2:+43514086 | None:intergenic |
| TACCTCAGAACCTAACCCTT+TGG | 0.473794 | 3_2:+43519211 | None:intergenic |
| GTATCGTTGGGAAGTGATAC+TGG | 0.476953 | 3_2:-43520250 | Msa0406740:CDS |
| TCCAACTTGTCTCGCTATGA+TGG | 0.480589 | 3_2:-43519435 | Msa0406740:CDS |
| CGGCAGCTGCAGTTTCTGCC+AGG | 0.482175 | 3_2:-43520282 | Msa0406740:CDS |
| CAACGATACAACACACTGCC+TGG | 0.490331 | 3_2:+43520264 | None:intergenic |
| TGGGATGTTTCTAGGGTGCC+AGG | 0.494163 | 3_2:-43520322 | Msa0406740:CDS |
| ATTGAAGATGGTGTTGATGC+TGG | 0.494844 | 3_2:-43519710 | Msa0406740:CDS |
| TGCTGGCAACCCAAGCGAAA+AGG | 0.500977 | 3_2:+43519488 | None:intergenic |
| TAAGCAGCTGAAGGAGCTGC+AGG | 0.503173 | 3_2:+43518419 | None:intergenic |
| GAATAGCTTCAAGGAGGCGC+TGG | 0.504940 | 3_2:-43518465 | Msa0406740:CDS |
| GTCAAAATGAGATAGAAAGT+TGG | 0.505044 | 3_2:+43519796 | None:intergenic |
| AGGCCAACAGGAAGGCCATT+CGG | 0.506095 | 3_2:+43517445 | None:intergenic |
| CCTAGCTGGACTACCTGCCT+TGG | 0.511239 | 3_2:-43517497 | Msa0406740:CDS |
| CAACCCGTGGGATGTTTCTA+GGG | 0.513746 | 3_2:-43520329 | Msa0406740:CDS |
| AGGCTATCAGCTACGATTGG+TGG | 0.516858 | 3_2:+43514446 | None:intergenic |
| CATTATAAGGAATAGCTTCA+AGG | 0.516894 | 3_2:-43518474 | Msa0406740:CDS |
| ATCATAGTAACCAGCTGAAA+GGG | 0.518202 | 3_2:+43518865 | None:intergenic |
| ATTCGTGAAACTATTGAAGA+TGG | 0.519456 | 3_2:-43519722 | Msa0406740:CDS |
| TTGGAAAGTAAGCCCTTGAA+AGG | 0.521290 | 3_2:-43519761 | Msa0406740:CDS |
| AGGGTGCCAGGAGGATCATC+CGG | 0.523170 | 3_2:-43520310 | Msa0406740:CDS |
| GAAGGGATCGTTCTACATCT+TGG | 0.527595 | 3_2:-43514410 | Msa0406740:three_prime_UTR |
| CCAATTCTCAGTCCTTTCAA+GGG | 0.528903 | 3_2:+43519749 | None:intergenic |
| AGGAGGATCATCCGGAGGAT+CGG | 0.529125 | 3_2:-43520302 | Msa0406740:CDS |
| CAGGCAGTGTGTTGTATCGT+TGG | 0.530074 | 3_2:-43520263 | Msa0406740:CDS |
| ATATTACAAACGAGCGCAGC+AGG | 0.530821 | 3_2:-43518840 | Msa0406740:intron |
| CTTGAGACGCGCCCATATGT+TGG | 0.532165 | 3_2:+43520178 | None:intergenic |
| CGTCTCAAGATTTGGACTCA+TGG | 0.533310 | 3_2:-43520164 | Msa0406740:CDS |
| GGGAAATCAAGATATCATAT+TGG | 0.533729 | 3_2:+43518441 | None:intergenic |
| GCATCATCGCTTGATGCCAT+TGG | 0.535359 | 3_2:-43520136 | Msa0406740:CDS |
| ACCATCATAGCGAGACAAGT+TGG | 0.538119 | 3_2:+43519434 | None:intergenic |
| CATCATAGTAACCAGCTGAA+AGG | 0.540452 | 3_2:+43518864 | None:intergenic |
| TATCATGACCAGCAATTGCA+TGG | 0.543365 | 3_2:+43520074 | None:intergenic |
| TAGGTTTGAAGCCAACATAT+GGG | 0.545372 | 3_2:-43520189 | Msa0406740:CDS |
| CAGAACCTAACCCTTTGGCT+CGG | 0.546221 | 3_2:+43519216 | None:intergenic |
| TGGTGGAAGTGTGAGGCAGC+CGG | 0.546383 | 3_2:-43520230 | Msa0406740:CDS |
| GATCCTTTGGCTATGTATGC+TGG | 0.549623 | 3_2:-43518290 | Msa0406740:CDS |
| GGACCGAATGGCCTTCCTGT+TGG | 0.550007 | 3_2:-43517448 | Msa0406740:CDS |
| GATTGGTGCAGCGTTTAATG+AGG | 0.553855 | 3_2:-43517416 | Msa0406740:intron |
| CCACATGGTAAAACCAAGGC+AGG | 0.555507 | 3_2:+43517484 | None:intergenic |
| TGATGCCACATCAAGTAAGC+AGG | 0.559736 | 3_2:-43520047 | Msa0406740:intron |
| TATGGTGAATCCCGAGCCAA+AGG | 0.561140 | 3_2:-43519227 | Msa0406740:CDS |
| GCCTTGAATAACAAGGGGAA+GGG | 0.561924 | 3_2:-43514427 | Msa0406740:exon |
| GCAGGGAGAGCTGCTGAGAG+TGG | 0.563133 | 3_2:-43514510 | Msa0406740:intron |
| CCAAGGCAGGTAGTCCAGCT+AGG | 0.568026 | 3_2:+43517497 | None:intergenic |
| AGGCAGTGTGTTGTATCGTT+GGG | 0.568441 | 3_2:-43520262 | Msa0406740:CDS |
| TATAGATTGATCAAGTGTAA+AGG | 0.571333 | 3_2:-43514081 | Msa0406740:three_prime_UTR |
| AGCCTTGAATAACAAGGGGA+AGG | 0.574057 | 3_2:-43514428 | Msa0406740:exon |
| AGCCAAAGGGTTAGGTTCTG+AGG | 0.574572 | 3_2:-43519213 | Msa0406740:intron |
| CAGGGAGAGCTGCTGAGAGT+GGG | 0.575596 | 3_2:-43514509 | Msa0406740:CDS |
| TCAAGGCTATCAGCTACGAT+TGG | 0.579342 | 3_2:+43514443 | None:intergenic |
| TCGTACCTGCTTACTTGATG+TGG | 0.579354 | 3_2:+43520042 | None:intergenic |
| GTAAAGGAGCAACTGCTCAT+CGG | 0.585240 | 3_2:-43514065 | Msa0406740:three_prime_UTR |
| AGCAGCTGAAGGAGCTGCAG+GGG | 0.585773 | 3_2:+43518421 | None:intergenic |
| ACAACACCGCAAAATGATGC+CGG | 0.586556 | 3_2:+43520211 | None:intergenic |
| CTGATAGCCTTGAATAACAA+GGG | 0.591749 | 3_2:-43514433 | Msa0406740:exon |
| AATAGGTGACTGCCAACCCG+TGG | 0.597933 | 3_2:-43520342 | Msa0406740:intron |
| CGATGAACCAAAGCAGCCAA+TGG | 0.598497 | 3_2:+43520120 | None:intergenic |
| TTACCCAACCCACCCATAGA+CGG | 0.600057 | 3_2:+43520459 | None:intergenic |
| TCAGTTTCATTAAAATGCGG+TGG | 0.607759 | 3_2:-43514370 | Msa0406740:three_prime_UTR |
| TCATTTGCAGGCCAACAGGA+AGG | 0.610270 | 3_2:+43517437 | None:intergenic |
| AAAGCGAGGACATAGTATGC+TGG | 0.610724 | 3_2:+43519471 | None:intergenic |
| GGCAACCCAAGCGAAAAGGA+TGG | 0.619210 | 3_2:+43519492 | None:intergenic |
| AAGCAGCTGAAGGAGCTGCA+GGG | 0.619430 | 3_2:+43518420 | None:intergenic |
| CCTAGAAACATCCCACGGGT+TGG | 0.621583 | 3_2:+43520330 | None:intergenic |
| ATGGTGAATCCCGAGCCAAA+GGG | 0.624972 | 3_2:-43519226 | Msa0406740:CDS |
| GGCACCCTAGAAACATCCCA+CGG | 0.630241 | 3_2:+43520325 | None:intergenic |
| GCTGATAGCCTTGAATAACA+AGG | 0.630798 | 3_2:-43514434 | Msa0406740:exon |
| TTATCAGTTTCATTAAAATG+CGG | 0.635428 | 3_2:-43514373 | Msa0406740:three_prime_UTR |
| TTTATTGAGAATGGACCGAA+TGG | 0.636411 | 3_2:-43517460 | Msa0406740:CDS |
| ATTAGGATGCTCTGTGAACG+AGG | 0.648039 | 3_2:-43519645 | Msa0406740:intron |
| CCATTCTCAATAAATCCACA+TGG | 0.649598 | 3_2:+43517469 | None:intergenic |
| TCACCAGCATACATAGCCAA+AGG | 0.651194 | 3_2:+43518287 | None:intergenic |
| TGATAGCCTTGAATAACAAG+GGG | 0.655699 | 3_2:-43514432 | Msa0406740:exon |
| ATAGGTGACTGCCAACCCGT+GGG | 0.663939 | 3_2:-43520341 | Msa0406740:intron |
| AAGATGATTCAGACAAAGCG+AGG | 0.664996 | 3_2:+43519457 | None:intergenic |
| GCACCCTAGAAACATCCCAC+GGG | 0.669473 | 3_2:+43520326 | None:intergenic |
| AAATCCACATGGTAAAACCA+AGG | 0.672604 | 3_2:+43517480 | None:intergenic |
| GTGATACTGGTGGAAGTGTG+AGG | 0.689164 | 3_2:-43520237 | Msa0406740:CDS |
| GATGTTTCTAGGGTGCCAGG+AGG | 0.695678 | 3_2:-43520319 | Msa0406740:CDS |
| GTGCCAGGAGGATCATCCGG+AGG | 0.699333 | 3_2:-43520307 | Msa0406740:CDS |
| CATGACCAGCAATTGCATGG+AGG | 0.725633 | 3_2:+43520077 | None:intergenic |
| TATAAGGAATAGCTTCAAGG+AGG | 0.745486 | 3_2:-43518471 | Msa0406740:CDS |
| TCGTTGGGAAGTGATACTGG+TGG | 0.795744 | 3_2:-43520247 | Msa0406740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTAAAAAGTAATTAAT+TGG | + | chr3_2:43514636-43514655 | None:intergenic | 10.0% |
| !! | AATAAATACAACATAAATAT+TGG | - | chr3_2:43516711-43516730 | Msa0406740:intron | 10.0% |
| !!! | ACAAAATAAAACATTTTGTT+CGG | + | chr3_2:43515136-43515155 | None:intergenic | 15.0% |
| !!! | ATTGATAAATCATTTTGTTT+TGG | - | chr3_2:43515169-43515188 | Msa0406740:intron | 15.0% |
| !! | AATAACAATGCATATAAAAT+TGG | + | chr3_2:43515536-43515555 | None:intergenic | 15.0% |
| !!! | TTCTATTTTTAATACATTTC+AGG | - | chr3_2:43515567-43515586 | Msa0406740:intron | 15.0% |
| !!! | ACTTTAATTTATGTTTTTCT+TGG | - | chr3_2:43515676-43515695 | Msa0406740:intron | 15.0% |
| !!! | TATAATCAAATCAAAAGTAT+GGG | + | chr3_2:43516271-43516290 | None:intergenic | 15.0% |
| !! | ATATAATCAAATCAAAAGTA+TGG | + | chr3_2:43516272-43516291 | None:intergenic | 15.0% |
| !! | AATTTGAAGATGATTAAATA+AGG | - | chr3_2:43518081-43518100 | Msa0406740:intron | 15.0% |
| !!! | TAGTTGATATACAATAAATA+AGG | + | chr3_2:43518284-43518303 | None:intergenic | 15.0% |
| !! | TAATTCATCTTCTTATTAAT+AGG | - | chr3_2:43519099-43519118 | Msa0406740:intron | 15.0% |
| !!! | TTTATTTTTTGAAGGAAAAA+AGG | + | chr3_2:43519916-43519935 | None:intergenic | 15.0% |
| !! | ATGAAACTGATAAATATTTA+TGG | + | chr3_2:43520105-43520124 | None:intergenic | 15.0% |
| !! | AACATATCTCAGTTATAAAT+GGG | + | chr3_2:43514093-43514112 | None:intergenic | 20.0% |
| !! | AAACATATCTCAGTTATAAA+TGG | + | chr3_2:43514094-43514113 | None:intergenic | 20.0% |
| !! | CATATATATGTTCATTCAAT+AGG | - | chr3_2:43514126-43514145 | Msa0406740:intron | 20.0% |
| !! | AATTCTTTCATTATTAGCAA+TGG | - | chr3_2:43514505-43514524 | Msa0406740:CDS | 20.0% |
| !!! | AATTAATTGGCTTAATAACA+AGG | + | chr3_2:43514623-43514642 | None:intergenic | 20.0% |
| !! | ATCCTTCTTAATTTCAAATT+TGG | - | chr3_2:43515308-43515327 | Msa0406740:intron | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+AGG | - | chr3_2:43515375-43515394 | Msa0406740:intron | 20.0% |
| !! | CATTCATTAAATGATGTATT+TGG | + | chr3_2:43515400-43515419 | None:intergenic | 20.0% |
| !!! | ATAGCAAAAATCAACTTTTT+AGG | + | chr3_2:43515464-43515483 | None:intergenic | 20.0% |
| !!! | TTAATTTATGTTTTTCTTGG+TGG | - | chr3_2:43515679-43515698 | Msa0406740:intron | 20.0% |
| !!! | TAATTTATGTTTTTCTTGGT+GGG | - | chr3_2:43515680-43515699 | Msa0406740:intron | 20.0% |
| !!! | TTTCGTTTATTTTAGAAGTT+TGG | - | chr3_2:43515943-43515962 | Msa0406740:intron | 20.0% |
| !!! | TTCGTTTATTTTAGAAGTTT+GGG | - | chr3_2:43515944-43515963 | Msa0406740:intron | 20.0% |
| !! | AAGTATTTCATTCTTCTTAT+TGG | - | chr3_2:43516233-43516252 | Msa0406740:intron | 20.0% |
| !! | GATTGAATATATATCATCTA+AGG | + | chr3_2:43516454-43516473 | None:intergenic | 20.0% |
| !! | TTAATTAATCAATAAGTGCA+GGG | - | chr3_2:43516494-43516513 | Msa0406740:intron | 20.0% |
| !! | CATCTCTATATTTATTGTAA+AGG | + | chr3_2:43516792-43516811 | None:intergenic | 20.0% |
| !! | ATTACAGATAATTCATAAAG+AGG | + | chr3_2:43516876-43516895 | None:intergenic | 20.0% |
| !!! | CACAATTTTTAAACTCTTTT+TGG | + | chr3_2:43517681-43517700 | None:intergenic | 20.0% |
| !! | AAGAGTTTAAAAATTGTGTT+CGG | - | chr3_2:43517683-43517702 | Msa0406740:intron | 20.0% |
| !! | ATACACACAAAAATATTCTA+GGG | + | chr3_2:43517963-43517982 | None:intergenic | 20.0% |
| !! | TTAAAGAGCAAATAATCTTT+AGG | + | chr3_2:43518063-43518082 | None:intergenic | 20.0% |
| !! | AAATGAGATAGTTGTATAAA+AGG | - | chr3_2:43518167-43518186 | Msa0406740:intron | 20.0% |
| !!! | CATAATTACACTAATTTTCA+AGG | + | chr3_2:43518379-43518398 | None:intergenic | 20.0% |
| !! | AAAAATTCTATCACAAAAGT+TGG | + | chr3_2:43518564-43518583 | None:intergenic | 20.0% |
| !!! | TTTGTGATAGAATTTTTCTA+TGG | - | chr3_2:43518567-43518586 | Msa0406740:intron | 20.0% |
| !! | TATTAGTATATGTTAGTATG+AGG | + | chr3_2:43518776-43518795 | None:intergenic | 20.0% |
| !! | TCATACTAACATATACTAAT+AGG | - | chr3_2:43518775-43518794 | Msa0406740:intron | 20.0% |
| !! | TAATATCTTTCTGTAATTGA+GGG | + | chr3_2:43519004-43519023 | None:intergenic | 20.0% |
| !! | AATAAGAAGATGAATTAAGA+GGG | + | chr3_2:43519096-43519115 | None:intergenic | 20.0% |
| !! | TAATAAGAAGATGAATTAAG+AGG | + | chr3_2:43519097-43519116 | None:intergenic | 20.0% |
| !! | AATCAATCAATCAAAATGTT+AGG | + | chr3_2:43519198-43519217 | None:intergenic | 20.0% |
| !! | AAAGATTAGACAAATTCAAA+AGG | - | chr3_2:43519287-43519306 | Msa0406740:intron | 20.0% |
| !!! | ATTACTTTTTGAAGAAAACT+TGG | + | chr3_2:43519347-43519366 | None:intergenic | 20.0% |
| !! | TTTACTTTATGAACTTAAGA+GGG | + | chr3_2:43519462-43519481 | None:intergenic | 20.0% |
| !! | TAGTTTAACCTAAAATAATG+TGG | - | chr3_2:43519816-43519835 | Msa0406740:intron | 20.0% |
| !! | AGTTTAACCTAAAATAATGT+GGG | - | chr3_2:43519817-43519836 | Msa0406740:intron | 20.0% |
| !!! | AAAAATAGAATCATCCTTTT+TGG | - | chr3_2:43519938-43519957 | Msa0406740:intron | 20.0% |
| !! | TTATCAGTTTCATTAAAATG+CGG | - | chr3_2:43520112-43520131 | Msa0406740:CDS | 20.0% |
| !! | AATTGTGATCATTTCAAAAA+AGG | + | chr3_2:43520331-43520350 | None:intergenic | 20.0% |
| !!! | TTTTTGAAATGATCACAATT+TGG | - | chr3_2:43520331-43520350 | Msa0406740:CDS | 20.0% |
| ! | AACTAACAGTGTAATTTATC+AGG | - | chr3_2:43514660-43514679 | Msa0406740:intron | 25.0% |
| ! | TCAAAATGAGATAGAAAGTT+GGG | + | chr3_2:43514691-43514710 | None:intergenic | 25.0% |
| ! | AGTTATAGAGAAAAATGAAG+TGG | + | chr3_2:43514870-43514889 | None:intergenic | 25.0% |
| !!! | TAAATCATTTTGTTTTGGCT+TGG | - | chr3_2:43515174-43515193 | Msa0406740:intron | 25.0% |
| !!! | AAATCATTTTGTTTTGGCTT+GGG | - | chr3_2:43515175-43515194 | Msa0406740:intron | 25.0% |
| ! | TGAAATTAAGAAGGATTGAA+AGG | + | chr3_2:43515304-43515323 | None:intergenic | 25.0% |
| !! | AGCCAAATTTGAAATTAAGA+AGG | + | chr3_2:43515313-43515332 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr3_2:43515365-43515384 | None:intergenic | 25.0% |
| !!! | ATTTTTGCTATAATAGTGAC+CGG | - | chr3_2:43515473-43515492 | Msa0406740:intron | 25.0% |
| !! | TTGGATCAATTCTTTTATAC+AGG | + | chr3_2:43515517-43515536 | None:intergenic | 25.0% |
| !!! | GTGAAAATGAGAATTTTGAT+GGG | - | chr3_2:43515589-43515608 | Msa0406740:intron | 25.0% |
| !!! | TGAAAATGAGAATTTTGATG+GGG | - | chr3_2:43515590-43515609 | Msa0406740:intron | 25.0% |
| !! | AATTTATGTTTTTCTTGGTG+GGG | - | chr3_2:43515681-43515700 | Msa0406740:intron | 25.0% |
| ! | TGACTGAATTCATTATCATT+GGG | + | chr3_2:43515733-43515752 | None:intergenic | 25.0% |
| ! | AACATATATTAATCTGAGTC+CGG | + | chr3_2:43515756-43515775 | None:intergenic | 25.0% |
| ! | CTAAAAGACAAATAAAGAAC+AGG | + | chr3_2:43515835-43515854 | None:intergenic | 25.0% |
| ! | TTACATAGAACACACATAAA+AGG | + | chr3_2:43515980-43515999 | None:intergenic | 25.0% |
| ! | CTTAATTAATCAATAAGTGC+AGG | - | chr3_2:43516493-43516512 | Msa0406740:intron | 25.0% |
| ! | TATATACTTGACACATGTTA+AGG | + | chr3_2:43516539-43516558 | None:intergenic | 25.0% |
| ! | TGTTGAATTAGAGAAAATAG+AGG | - | chr3_2:43516628-43516647 | Msa0406740:intron | 25.0% |
| !! | TTCGTGGTTTTTCTTTTTAT+AGG | - | chr3_2:43516955-43516974 | Msa0406740:intron | 25.0% |
| ! | AGAAAACAAAACAAAACTAG+AGG | + | chr3_2:43517153-43517172 | None:intergenic | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | - | chr3_2:43517353-43517372 | Msa0406740:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr3_2:43517356-43517375 | Msa0406740:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr3_2:43517360-43517379 | Msa0406740:intron | 25.0% |
| !!! | TTCTTTAAGAAAGTATTCTC+AGG | + | chr3_2:43517724-43517743 | None:intergenic | 25.0% |
| !!! | ACATATTGGTTTATAAACGT+GGG | - | chr3_2:43517792-43517811 | Msa0406740:intron | 25.0% |
| !! | AACTTCCTTTGTTTCTTAAA+AGG | + | chr3_2:43517850-43517869 | None:intergenic | 25.0% |
| ! | TTAGTTGAAAAAAAGTTGCT+AGG | - | chr3_2:43517926-43517945 | Msa0406740:intron | 25.0% |
| ! | CATACACACAAAAATATTCT+AGG | + | chr3_2:43517964-43517983 | None:intergenic | 25.0% |
| ! | GAATTATTTATTCCCATCTT+TGG | + | chr3_2:43517991-43518010 | None:intergenic | 25.0% |
| !!! | AAATTCTTTAGAACGTAACA+TGG | + | chr3_2:43518127-43518146 | None:intergenic | 25.0% |
| ! | TATACAACTATCTCATTTGA+TGG | + | chr3_2:43518165-43518184 | None:intergenic | 25.0% |
| ! | CTCAATGAAATGTAGAATTT+AGG | + | chr3_2:43518526-43518545 | None:intergenic | 25.0% |
| !! | TCTACAACTCATGTAATTTT+GGG | + | chr3_2:43518625-43518644 | None:intergenic | 25.0% |
| !! | TTCTACAACTCATGTAATTT+TGG | + | chr3_2:43518626-43518645 | None:intergenic | 25.0% |
| ! | AACTGGGAATATAAGAAATA+AGG | + | chr3_2:43518742-43518761 | None:intergenic | 25.0% |
| ! | GTAATATCTTTCTGTAATTG+AGG | + | chr3_2:43519005-43519024 | None:intergenic | 25.0% |
| ! | AGTCATTTAAGTAAAGGATT+GGG | + | chr3_2:43519063-43519082 | None:intergenic | 25.0% |
| ! | TAGTCATTTAAGTAAAGGAT+TGG | + | chr3_2:43519064-43519083 | None:intergenic | 25.0% |
| ! | GTATCTAGTCATTTAAGTAA+AGG | + | chr3_2:43519069-43519088 | None:intergenic | 25.0% |
| ! | TGTGATAATTGGAAGAAATA+TGG | + | chr3_2:43519133-43519152 | None:intergenic | 25.0% |
| ! | CTTTACTTTATGAACTTAAG+AGG | + | chr3_2:43519463-43519482 | None:intergenic | 25.0% |
| ! | AAAGTGAAAAAGAAAACTCT+AGG | - | chr3_2:43519490-43519509 | Msa0406740:CDS | 25.0% |
| !!! | TTTTTGGTATCTCATATACT+TGG | - | chr3_2:43519764-43519783 | Msa0406740:CDS | 25.0% |
| ! | AAATAAATTCCAAGCCAAAA+AGG | + | chr3_2:43519955-43519974 | None:intergenic | 25.0% |
| ! | TACCAAATAGAAGGAAAATT+TGG | - | chr3_2:43520169-43520188 | Msa0406740:CDS | 25.0% |
| !! | AACCAAATTTTCCTTCTATT+TGG | + | chr3_2:43520174-43520193 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTGACATTAC+AGG | - | chr3_2:43520184-43520203 | Msa0406740:CDS | 25.0% |
| ! | TATAGATTGATCAAGTGTAA+AGG | - | chr3_2:43520404-43520423 | Msa0406740:intron | 25.0% |
| TAACTGAGATATGTTTACTC+AGG | - | chr3_2:43514098-43514117 | Msa0406740:intron | 30.0% | |
| ! | AACAACATTTTTGCCAAACA+TGG | + | chr3_2:43514477-43514496 | None:intergenic | 30.0% |
| TTATTAGCAATGGTCATTGA+CGG | - | chr3_2:43514515-43514534 | Msa0406740:intron | 30.0% | |
| GGCTCTTTGTTAAATATGAA+GGG | - | chr3_2:43514558-43514577 | Msa0406740:intron | 30.0% | |
| TAACAGTGTAATTTATCAGG+AGG | - | chr3_2:43514663-43514682 | Msa0406740:intron | 30.0% | |
| GTCAAAATGAGATAGAAAGT+TGG | + | chr3_2:43514692-43514711 | None:intergenic | 30.0% | |
| !!! | CTTTCTATCTCATTTTGACT+CGG | - | chr3_2:43514693-43514712 | Msa0406740:intron | 30.0% |
| ATTCGTGAAACTATTGAAGA+TGG | - | chr3_2:43514763-43514782 | Msa0406740:intron | 30.0% | |
| TATAGAGAAAAATGAAGTGG+AGG | + | chr3_2:43514867-43514886 | None:intergenic | 30.0% | |
| ! | AGTTAATGGACAGATGAAAA+GGG | + | chr3_2:43514959-43514978 | None:intergenic | 30.0% |
| ! | AAGTTAATGGACAGATGAAA+AGG | + | chr3_2:43514960-43514979 | None:intergenic | 30.0% |
| ATATCTAGATATAGAGAAGG+TGG | + | chr3_2:43515202-43515221 | None:intergenic | 30.0% | |
| ACCTTCTCTATATCTAGATA+TGG | - | chr3_2:43515201-43515220 | Msa0406740:intron | 30.0% | |
| TCCATATCTAGATATAGAGA+AGG | + | chr3_2:43515205-43515224 | None:intergenic | 30.0% | |
| ! | AAATTTGGCTGCAAGATTTT+TGG | - | chr3_2:43515323-43515342 | Msa0406740:intron | 30.0% |
| !!! | TATGCATTGTTATTTTGAGC+TGG | - | chr3_2:43515542-43515561 | Msa0406740:intron | 30.0% |
| ! | GGTGAAAATGAGAATTTTGA+TGG | - | chr3_2:43515588-43515607 | Msa0406740:intron | 30.0% |
| GTGACTGAATTCATTATCAT+TGG | + | chr3_2:43515734-43515753 | None:intergenic | 30.0% | |
| ! | ATGATAATGAATTCAGTCAC+CGG | - | chr3_2:43515734-43515753 | Msa0406740:intron | 30.0% |
| TTATGTGTGTTCTATGTAAC+AGG | - | chr3_2:43515981-43516000 | Msa0406740:intron | 30.0% | |
| CTTGAAGCTATTCCTTATAA+TGG | + | chr3_2:43516013-43516032 | None:intergenic | 30.0% | |
| CATTATAAGGAATAGCTTCA+AGG | - | chr3_2:43516011-43516030 | Msa0406740:intron | 30.0% | |
| GGGAAATCAAGATATCATAT+TGG | + | chr3_2:43516047-43516066 | None:intergenic | 30.0% | |
| CTAACATGCAATAATGCAAA+AGG | + | chr3_2:43516120-43516139 | None:intergenic | 30.0% | |
| CGAAAAGAAAAATGATCCTT+TGG | - | chr3_2:43516182-43516201 | Msa0406740:intron | 30.0% | |
| ! | AGACAAATAGTGTTAGTTTG+AGG | - | chr3_2:43516305-43516324 | Msa0406740:intron | 30.0% |
| ! | AATAGTGTTAGTTTGAGGTT+TGG | - | chr3_2:43516310-43516329 | Msa0406740:intron | 30.0% |
| ! | CAGCAGAGTCAATTTTATAT+AGG | - | chr3_2:43516680-43516699 | Msa0406740:intron | 30.0% |
| GAAAAACCACGAATAAAGAA+AGG | + | chr3_2:43516948-43516967 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr3_2:43517274-43517293 | Msa0406740:intron | 30.0% | |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | + | chr3_2:43517347-43517366 | None:intergenic | 30.0% |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr3_2:43517359-43517378 | Msa0406740:intron | 30.0% | |
| AATTCATGTGTGATATTCCA+GGG | + | chr3_2:43517653-43517672 | None:intergenic | 30.0% | |
| AAATTCATGTGTGATATTCC+AGG | + | chr3_2:43517654-43517673 | None:intergenic | 30.0% | |
| !! | CACATATTGGTTTATAAACG+TGG | - | chr3_2:43517791-43517810 | Msa0406740:intron | 30.0% |
| !! | AATGGCCTTTTAAGAAACAA+AGG | - | chr3_2:43517842-43517861 | Msa0406740:intron | 30.0% |
| AAGAGCAAATAATCTTTAGG+AGG | + | chr3_2:43518060-43518079 | None:intergenic | 30.0% | |
| !! | TGGCATTATTTTTCGTAATG+TGG | + | chr3_2:43518107-43518126 | None:intergenic | 30.0% |
| ! | TCATTTGATGGATGAAGAAA+AGG | + | chr3_2:43518153-43518172 | None:intergenic | 30.0% |
| GACAAATATTCCAAACAAGA+CGG | + | chr3_2:43518215-43518234 | None:intergenic | 30.0% | |
| TCGAATGACTAATGATTATG+GGG | + | chr3_2:43518307-43518326 | None:intergenic | 30.0% | |
| GTCGAATGACTAATGATTAT+GGG | + | chr3_2:43518308-43518327 | None:intergenic | 30.0% | |
| TAAACTGCAAACAATATGAG+AGG | - | chr3_2:43518414-43518433 | Msa0406740:CDS | 30.0% | |
| AAACTGCAAACAATATGAGA+GGG | - | chr3_2:43518415-43518434 | Msa0406740:CDS | 30.0% | |
| TTTCTATCTCCTTTCTTTCT+TGG | - | chr3_2:43518477-43518496 | Msa0406740:CDS | 30.0% | |
| TTCTATCTCCTTTCTTTCTT+GGG | - | chr3_2:43518478-43518497 | Msa0406740:CDS | 30.0% | |
| ATTCTACATTTCATTGAGCA+TGG | - | chr3_2:43518528-43518547 | Msa0406740:intron | 30.0% | |
| ! | CTACAACTCATGTAATTTTG+GGG | + | chr3_2:43518624-43518643 | None:intergenic | 30.0% |
| AGGGAATTAAATGAAGGATT+GGG | + | chr3_2:43518687-43518706 | None:intergenic | 30.0% | |
| TTCTCATGTAGAAAAATGAG+GGG | + | chr3_2:43518714-43518733 | None:intergenic | 30.0% | |
| CTTCTCATGTAGAAAAATGA+GGG | + | chr3_2:43518715-43518734 | None:intergenic | 30.0% | |
| AAGATATTACAGAACTTCGA+TGG | - | chr3_2:43519015-43519034 | Msa0406740:intron | 30.0% | |
| GTCATTTAAGTAAAGGATTG+GGG | + | chr3_2:43519062-43519081 | None:intergenic | 30.0% | |
| !! | GTTAGATGGATTGTGATAAT+TGG | + | chr3_2:43519144-43519163 | None:intergenic | 30.0% |
| CAAAAGGAAATAGTAAAGAG+AGG | - | chr3_2:43519303-43519322 | Msa0406740:intron | 30.0% | |
| !!! | TGTAGCTCGGTTTATTTTTT+TGG | - | chr3_2:43519394-43519413 | Msa0406740:intron | 30.0% |
| !!! | GTAGCTCGGTTTATTTTTTT+GGG | - | chr3_2:43519395-43519414 | Msa0406740:intron | 30.0% |
| !!! | ATTTTTTTGGGCTAAAAGAG+AGG | - | chr3_2:43519407-43519426 | Msa0406740:intron | 30.0% |
| !! | TGCTACATTTTGCTTTAGAT+TGG | - | chr3_2:43519526-43519545 | Msa0406740:intron | 30.0% |
| !! | GCTACATTTTGCTTTAGATT+GGG | - | chr3_2:43519527-43519546 | Msa0406740:intron | 30.0% |
| AAAACATACTGAACTACATG+TGG | - | chr3_2:43519577-43519596 | Msa0406740:intron | 30.0% | |
| ! | ATAGGACAAAAAAGTACACT+TGG | + | chr3_2:43519604-43519623 | None:intergenic | 30.0% |
| AACATGGAAGTTTAGCAAAT+AGG | + | chr3_2:43519622-43519641 | None:intergenic | 30.0% | |
| ! | CTGCAGTTTTTCTATAAACA+TGG | + | chr3_2:43519638-43519657 | None:intergenic | 30.0% |
| CTTACATACAATTGTACTGT+CGG | - | chr3_2:43519670-43519689 | Msa0406740:CDS | 30.0% | |
| CATTTGATCACTTTCAATGT+TGG | + | chr3_2:43519713-43519732 | None:intergenic | 30.0% | |
| CAACATTGAAAGTGATCAAA+TGG | - | chr3_2:43519711-43519730 | Msa0406740:CDS | 30.0% | |
| ! | TCATATACTTGGTCTTTCTT+GGG | - | chr3_2:43519775-43519794 | Msa0406740:CDS | 30.0% |
| ! | GTCTTTCTTGGGTAAAATTT+TGG | - | chr3_2:43519786-43519805 | Msa0406740:CDS | 30.0% |
| ! | ATACATGCCCACATTATTTT+AGG | + | chr3_2:43519827-43519846 | None:intergenic | 30.0% |
| ! | GACATTACAGGCAAATATTT+TGG | - | chr3_2:43520196-43520215 | Msa0406740:CDS | 30.0% |
| TCGGAACTTAACAAATAAGT+TGG | - | chr3_2:43520439-43520458 | Msa0406740:intron | 30.0% | |
| CCTCAACAGTAAAAATTACA+AGG | + | chr3_2:43520465-43520484 | None:intergenic | 30.0% | |
| ! | CCTTGTAATTTTTACTGTTG+AGG | - | chr3_2:43520462-43520481 | Msa0406740:intron | 30.0% |
| ! | TAGGTTTGAAGCCAACATAT+GGG | - | chr3_2:43514296-43514315 | Msa0406740:three_prime_UTR | 35.0% |
| ! | TACGAGTTTTTCACCATGTT+TGG | - | chr3_2:43514461-43514480 | Msa0406740:CDS | 35.0% |
| GGGCTCTTTGTTAAATATGA+AGG | - | chr3_2:43514557-43514576 | Msa0406740:intron | 35.0% | |
| ! | ATTTTGTTCGGTTGTGTGTT+TGG | + | chr3_2:43515124-43515143 | None:intergenic | 35.0% |
| GTATATTTACATACTCCCTC+CGG | + | chr3_2:43515495-43515514 | None:intergenic | 35.0% | |
| ATCATAGTAACCAGCTGAAA+GGG | + | chr3_2:43515623-43515642 | None:intergenic | 35.0% | |
| AGACAAATAAAGAACAGGAG+TGG | + | chr3_2:43515830-43515849 | None:intergenic | 35.0% | |
| AGTCAACATAGATATTGCTC+TGG | - | chr3_2:43515866-43515885 | Msa0406740:intron | 35.0% | |
| ATACTCTTGCTTCATTTCCT+AGG | - | chr3_2:43515899-43515918 | Msa0406740:intron | 35.0% | |
| AACAGGTGAGAACCATTATA+AGG | - | chr3_2:43515998-43516017 | Msa0406740:intron | 35.0% | |
| TATAAGGAATAGCTTCAAGG+AGG | - | chr3_2:43516014-43516033 | Msa0406740:intron | 35.0% | |
| ! | CCAATTTTATAAGCAGCTGA+AGG | + | chr3_2:43516078-43516097 | None:intergenic | 35.0% |
| CCTTCAGCTGCTTATAAAAT+TGG | - | chr3_2:43516075-43516094 | Msa0406740:intron | 35.0% | |
| CAGAGAAAGATTACTATTGC+AGG | + | chr3_2:43516145-43516164 | None:intergenic | 35.0% | |
| CTAAAGTTTATAGAGCTTCC+AGG | - | chr3_2:43516396-43516415 | Msa0406740:intron | 35.0% | |
| ! | GAGTTCTAGTTACTCCATAA+AGG | - | chr3_2:43516566-43516585 | Msa0406740:intron | 35.0% |
| AGAAAGGCAAACATTATGCT+CGG | + | chr3_2:43516932-43516951 | None:intergenic | 35.0% | |
| TGTTTGCCTTTCTTTATTCG+TGG | - | chr3_2:43516939-43516958 | Msa0406740:intron | 35.0% | |
| AAATCCACATGGTAAAACCA+AGG | + | chr3_2:43517008-43517027 | None:intergenic | 35.0% | |
| CCATTCTCAATAAATCCACA+TGG | + | chr3_2:43517019-43517038 | None:intergenic | 35.0% | |
| CCATGTGGATTTATTGAGAA+TGG | - | chr3_2:43517016-43517035 | Msa0406740:intron | 35.0% | |
| TTTATTGAGAATGGACCGAA+TGG | - | chr3_2:43517025-43517044 | Msa0406740:intron | 35.0% | |
| !! | AAGAGCATTAAAGAGAGAGA+TGG | - | chr3_2:43517187-43517206 | Msa0406740:intron | 35.0% |
| AGAGAGATGGTTAAAACCTA+AGG | - | chr3_2:43517200-43517219 | Msa0406740:intron | 35.0% | |
| GGAAAAAAGGAATGAGTAAG+TGG | - | chr3_2:43517254-43517273 | Msa0406740:intron | 35.0% | |
| TGAGTAAGTGGAAGAAATAG+AGG | - | chr3_2:43517266-43517285 | Msa0406740:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr3_2:43517273-43517292 | Msa0406740:intron | 35.0% | |
| TATTCCAGGGAATCAATTCT+GGG | + | chr3_2:43517640-43517659 | None:intergenic | 35.0% | |
| ATATTCCAGGGAATCAATTC+TGG | + | chr3_2:43517641-43517660 | None:intergenic | 35.0% | |
| ! | TCGTCTAGTTTACATGACAA+GGG | + | chr3_2:43517767-43517786 | None:intergenic | 35.0% |
| ! | GTTACTTAGGAGGGTATAAA+TGG | - | chr3_2:43517824-43517843 | Msa0406740:intron | 35.0% |
| AAACAAAGGAAGTTAACTGC+TGG | - | chr3_2:43517856-43517875 | Msa0406740:intron | 35.0% | |
| AACAAAGGAAGTTAACTGCT+GGG | - | chr3_2:43517857-43517876 | Msa0406740:intron | 35.0% | |
| ! | ATTTTCATACCCAGCACAAA+GGG | + | chr3_2:43517898-43517917 | None:intergenic | 35.0% |
| TTTGTGCTGGGTATGAAAAT+GGG | - | chr3_2:43517898-43517917 | Msa0406740:intron | 35.0% | |
| TGTGTATGTCTTCCAAAGAT+GGG | - | chr3_2:43517976-43517995 | Msa0406740:intron | 35.0% | |
| CTGCTACAAATTAAGTTCCT+GGG | + | chr3_2:43518026-43518045 | None:intergenic | 35.0% | |
| ACTGCTACAAATTAAGTTCC+TGG | + | chr3_2:43518027-43518046 | None:intergenic | 35.0% | |
| TTCCAAACAAGACGGTTAAT+AGG | + | chr3_2:43518207-43518226 | None:intergenic | 35.0% | |
| CGTCGAATGACTAATGATTA+TGG | + | chr3_2:43518309-43518328 | None:intergenic | 35.0% | |
| GAGGGATGAAGTACAAATTT+CGG | - | chr3_2:43518433-43518452 | Msa0406740:CDS | 35.0% | |
| AAAGGAGATAGAAACCAACA+GGG | + | chr3_2:43518471-43518490 | None:intergenic | 35.0% | |
| TCTATCTCCTTTCTTTCTTG+GGG | - | chr3_2:43518479-43518498 | Msa0406740:CDS | 35.0% | |
| !! | AACTCATGTAATTTTGGGGA+GGG | + | chr3_2:43518620-43518639 | None:intergenic | 35.0% |
| GGGAATTAAATGAAGGATTG+GGG | + | chr3_2:43518686-43518705 | None:intergenic | 35.0% | |
| GAGGGAATTAAATGAAGGAT+TGG | + | chr3_2:43518688-43518707 | None:intergenic | 35.0% | |
| GCTTCTCATGTAGAAAAATG+AGG | + | chr3_2:43518716-43518735 | None:intergenic | 35.0% | |
| AGTATATGTTAGTATGAGGC+AGG | + | chr3_2:43518772-43518791 | None:intergenic | 35.0% | |
| TTAGACAGTTGAATCCTGAT+GGG | + | chr3_2:43518872-43518891 | None:intergenic | 35.0% | |
| ATTAGACAGTTGAATCCTGA+TGG | + | chr3_2:43518873-43518892 | None:intergenic | 35.0% | |
| CAGTAAGAGTAAGAGTTAGA+TGG | + | chr3_2:43519158-43519177 | None:intergenic | 35.0% | |
| CATCTAACTCTTACTCTTAC+TGG | - | chr3_2:43519156-43519175 | Msa0406740:intron | 35.0% | |
| TGAATTGTAGCACAAAGATG+AGG | + | chr3_2:43519227-43519246 | None:intergenic | 35.0% | |
| TGTGCTTATAAACTGTAGCT+CGG | - | chr3_2:43519381-43519400 | Msa0406740:intron | 35.0% | |
| !!! | TGATTTTTTTGTTGTCCCAC+TGG | - | chr3_2:43519434-43519453 | Msa0406740:CDS | 35.0% |
| ATGGTCAAAGTTAACTAACG+TGG | - | chr3_2:43519730-43519749 | Msa0406740:CDS | 35.0% | |
| ! | CTCATATACTTGGTCTTTCT+TGG | - | chr3_2:43519774-43519793 | Msa0406740:CDS | 35.0% |
| CATTATCTCTTGTAGAACTC+AGG | + | chr3_2:43519855-43519874 | None:intergenic | 35.0% | |
| !!! | TAGAATCATCCTTTTTGGCT+TGG | - | chr3_2:43519943-43519962 | Msa0406740:intron | 35.0% |
| !! | TTGGCTTGGAATTTATTTGC+AGG | - | chr3_2:43519957-43519976 | Msa0406740:intron | 35.0% |
| ! | TGGCTTGGAATTTATTTGCA+GGG | - | chr3_2:43519958-43519977 | Msa0406740:intron | 35.0% |
| ! | CTGATAGCCTTGAATAACAA+GGG | - | chr3_2:43520052-43520071 | Msa0406740:CDS | 35.0% |
| ! | TGATAGCCTTGAATAACAAG+GGG | - | chr3_2:43520053-43520072 | Msa0406740:CDS | 35.0% |
| TCAGTTTCATTAAAATGCGG+TGG | - | chr3_2:43520115-43520134 | Msa0406740:CDS | 35.0% | |
| GTTCAGTGTTACCAAATAGA+AGG | - | chr3_2:43520160-43520179 | Msa0406740:CDS | 35.0% | |
| ACACTTGATCAATCTATAGC+TGG | + | chr3_2:43520402-43520421 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTCCGTCTATGGGT+GGG | - | chr3_2:43514018-43514037 | Msa0406740:intron | 40.0% |
| ! | GTAGGTTTGAAGCCAACATA+TGG | - | chr3_2:43514295-43514314 | Msa0406740:three_prime_UTR | 40.0% |
| TATCATGACCAGCAATTGCA+TGG | + | chr3_2:43514414-43514433 | None:intergenic | 40.0% | |
| GGCAATGTTTGGTATAGTCT+CGG | - | chr3_2:43514536-43514555 | Msa0406740:intron | 40.0% | |
| GCAATGTTTGGTATAGTCTC+GGG | - | chr3_2:43514537-43514556 | Msa0406740:intron | 40.0% | |
| !!! | TTTTGACTCGGCAAGTTCTT+TGG | - | chr3_2:43514705-43514724 | Msa0406740:intron | 40.0% |
| TTGGAAAGTAAGCCCTTGAA+AGG | - | chr3_2:43514724-43514743 | Msa0406740:intron | 40.0% | |
| CCAATTCTCAGTCCTTTCAA+GGG | + | chr3_2:43514739-43514758 | None:intergenic | 40.0% | |
| ACCAATTCTCAGTCCTTTCA+AGG | + | chr3_2:43514740-43514759 | None:intergenic | 40.0% | |
| !! | ATTGAAGATGGTGTTGATGC+TGG | - | chr3_2:43514775-43514794 | Msa0406740:intron | 40.0% |
| !! | TGATGCTGCTTCACATTTTG+AGG | - | chr3_2:43514816-43514835 | Msa0406740:intron | 40.0% |
| !!! | GCTTCACATTTTGAGGCATT+AGG | - | chr3_2:43514823-43514842 | Msa0406740:intron | 40.0% |
| !! | TCATCTGTCCATTAACTTGC+AGG | - | chr3_2:43514962-43514981 | Msa0406740:intron | 40.0% |
| AAGATGATTCAGACAAAGCG+AGG | + | chr3_2:43515031-43515050 | None:intergenic | 40.0% | |
| TGTCTCGCTATGATGGTATT+AGG | - | chr3_2:43515057-43515076 | Msa0406740:intron | 40.0% | |
| CTATGATGGTATTAGGTCAG+TGG | - | chr3_2:43515064-43515083 | Msa0406740:intron | 40.0% | |
| CAAGCTCATCAGCATAAACT+TGG | + | chr3_2:43515230-43515249 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr3_2:43515361-43515380 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr3_2:43515362-43515381 | None:intergenic | 40.0% | |
| ! | TTTGCTATAATAGTGACCGG+AGG | - | chr3_2:43515476-43515495 | Msa0406740:intron | 40.0% |
| TTGCTATAATAGTGACCGGA+GGG | - | chr3_2:43515477-43515496 | Msa0406740:intron | 40.0% | |
| CATCATAGTAACCAGCTGAA+AGG | + | chr3_2:43515624-43515643 | None:intergenic | 40.0% | |
| TTGGGTTAAGAAGAATCGAG+AGG | + | chr3_2:43515715-43515734 | None:intergenic | 40.0% | |
| TCTCTGTCTTTGACATATGC+AGG | - | chr3_2:43516159-43516178 | Msa0406740:intron | 40.0% | |
| AACTGATGACTTCATTCGCT+GGG | + | chr3_2:43516597-43516616 | None:intergenic | 40.0% | |
| TAACTGATGACTTCATTCGC+TGG | + | chr3_2:43516598-43516617 | None:intergenic | 40.0% | |
| ATAACTAGTTATGCGCTCAG+TGG | - | chr3_2:43516835-43516854 | Msa0406740:intron | 40.0% | |
| TAGGTAAATGTCAACCTAGC+TGG | - | chr3_2:43516974-43516993 | Msa0406740:intron | 40.0% | |
| TACACTGAACTTCGTGTTGA+TGG | - | chr3_2:43517112-43517131 | Msa0406740:intron | 40.0% | |
| ! | ACACTGAACTTCGTGTTGAT+GGG | - | chr3_2:43517113-43517132 | Msa0406740:intron | 40.0% |
| AAACTCGCAAACAAAGCCTT+AGG | + | chr3_2:43517219-43517238 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr3_2:43517218-43517237 | Msa0406740:intron | 40.0% |
| GAAATAGAGGAAAATGGGAG+AGG | - | chr3_2:43517279-43517298 | Msa0406740:intron | 40.0% | |
| GATACAAAACCCTCCTCATT+TGG | - | chr3_2:43517331-43517350 | Msa0406740:intron | 40.0% | |
| TTAGTTCCTCCAAATGAGGA+GGG | + | chr3_2:43517343-43517362 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | + | chr3_2:43517344-43517363 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr3_2:43517366-43517385 | Msa0406740:intron | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr3_2:43517367-43517386 | Msa0406740:intron | 40.0% |
| ! | TTTGAGGGGTGCAAAATATG+AGG | + | chr3_2:43517541-43517560 | None:intergenic | 40.0% |
| ! | AAGGAAAGGAAAGGCTTTGA+GGG | + | chr3_2:43517556-43517575 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr3_2:43517584-43517603 | None:intergenic | 40.0% |
| AAACTCCCAAACAAAGCCTA+AGG | - | chr3_2:43517583-43517602 | Msa0406740:intron | 40.0% | |
| AACTCCCAAACAAAGCCTAA+GGG | - | chr3_2:43517584-43517603 | Msa0406740:intron | 40.0% | |
| CATCAAACAAACACTCCCTT+AGG | + | chr3_2:43517602-43517621 | None:intergenic | 40.0% | |
| !! | CTAAGGGAGTGTTTGTTTGA+TGG | - | chr3_2:43517600-43517619 | Msa0406740:intron | 40.0% |
| ! | TATTCCCAGAATTGATTCCC+TGG | - | chr3_2:43517633-43517652 | Msa0406740:intron | 40.0% |
| ! | CTCGTCTAGTTTACATGACA+AGG | + | chr3_2:43517768-43517787 | None:intergenic | 40.0% |
| CTTGTCATGTAAACTAGACG+AGG | - | chr3_2:43517766-43517785 | Msa0406740:intron | 40.0% | |
| ACTAGACGAGGTACACATAT+TGG | - | chr3_2:43517778-43517797 | Msa0406740:intron | 40.0% | |
| ! | CATTTTCATACCCAGCACAA+AGG | + | chr3_2:43517899-43517918 | None:intergenic | 40.0% |
| CTTTGTGCTGGGTATGAAAA+TGG | - | chr3_2:43517897-43517916 | Msa0406740:intron | 40.0% | |
| TTGTGCTGGGTATGAAAATG+GGG | - | chr3_2:43517899-43517918 | Msa0406740:intron | 40.0% | |
| GTGTGTATGTCTTCCAAAGA+TGG | - | chr3_2:43517975-43517994 | Msa0406740:intron | 40.0% | |
| ACGGTTAATAGGAGACAAAG+GGG | + | chr3_2:43518196-43518215 | None:intergenic | 40.0% | |
| GACGGTTAATAGGAGACAAA+GGG | + | chr3_2:43518197-43518216 | None:intergenic | 40.0% | |
| AGACGGTTAATAGGAGACAA+AGG | + | chr3_2:43518198-43518217 | None:intergenic | 40.0% | |
| ! | CTCCTATTAACCGTCTTGTT+TGG | - | chr3_2:43518202-43518221 | Msa0406740:intron | 40.0% |
| GGATGAAGTACAAATTTCGG+TGG | - | chr3_2:43518436-43518455 | Msa0406740:CDS | 40.0% | |
| GAAAGGAGATAGAAACCAAC+AGG | + | chr3_2:43518472-43518491 | None:intergenic | 40.0% | |
| AACCATTCCCCAAGAAAGAA+AGG | + | chr3_2:43518489-43518508 | None:intergenic | 40.0% | |
| TTTCTTGGGGAATGGTTTGA+AGG | - | chr3_2:43518492-43518511 | Msa0406740:intron | 40.0% | |
| !! | ACTCATGTAATTTTGGGGAG+GGG | + | chr3_2:43518619-43518638 | None:intergenic | 40.0% |
| !! | CAACTCATGTAATTTTGGGG+AGG | + | chr3_2:43518621-43518640 | None:intergenic | 40.0% |
| GGTGAGAGGGAATTAAATGA+AGG | + | chr3_2:43518693-43518712 | None:intergenic | 40.0% | |
| TAGAAAAATGAGGGGTGAGA+GGG | + | chr3_2:43518706-43518725 | None:intergenic | 40.0% | |
| ACAAGGAGAATAGTTGTGAG+GGG | + | chr3_2:43518815-43518834 | None:intergenic | 40.0% | |
| GACAAGGAGAATAGTTGTGA+GGG | + | chr3_2:43518816-43518835 | None:intergenic | 40.0% | |
| AACTATTCTCCTTGTCCTCA+AGG | - | chr3_2:43518820-43518839 | Msa0406740:intron | 40.0% | |
| ATTACAAGATGTCCACCTTG+AGG | + | chr3_2:43518838-43518857 | None:intergenic | 40.0% | |
| AATAGTTGAAGAGTCCCATC+AGG | - | chr3_2:43518855-43518874 | Msa0406740:CDS | 40.0% | |
| !!! | AGATTGGGTTGACTGCATTT+TGG | - | chr3_2:43519542-43519561 | Msa0406740:intron | 40.0% |
| CATACAATTGTACTGTCGGT+AGG | - | chr3_2:43519674-43519693 | Msa0406740:CDS | 40.0% | |
| !! | CGTGGTCTTACTACTCTTTT+TGG | - | chr3_2:43519748-43519767 | Msa0406740:CDS | 40.0% |
| ! | GCTGATAGCCTTGAATAACA+AGG | - | chr3_2:43520051-43520070 | Msa0406740:CDS | 40.0% |
| TGGTCACACATGATTGAATC+TGG | - | chr3_2:43520216-43520235 | Msa0406740:CDS | 40.0% | |
| !!! | GTTTTTTCTCCGTCTATGGG+TGG | - | chr3_2:43514017-43514036 | Msa0406740:intron | 45.0% |
| AGGCAGTGTGTTGTATCGTT+GGG | - | chr3_2:43514223-43514242 | Msa0406740:three_prime_UTR | 45.0% | |
| GTATCGTTGGGAAGTGATAC+TGG | - | chr3_2:43514235-43514254 | Msa0406740:three_prime_UTR | 45.0% | |
| ACAACACCGCAAAATGATGC+CGG | + | chr3_2:43514277-43514296 | None:intergenic | 45.0% | |
| !!! | GCATCATTTTGCGGTGTTGT+AGG | - | chr3_2:43514277-43514296 | Msa0406740:three_prime_UTR | 45.0% |
| CGTCTCAAGATTTGGACTCA+TGG | - | chr3_2:43514321-43514340 | Msa0406740:three_prime_UTR | 45.0% | |
| ! | CATTGGCTGCTTTGGTTCAT+CGG | - | chr3_2:43514366-43514385 | Msa0406740:three_prime_UTR | 45.0% |
| ATTCTCCTCCATGCAATTGC+TGG | - | chr3_2:43514403-43514422 | Msa0406740:three_prime_UTR | 45.0% | |
| TGATGCCACATCAAGTAAGC+AGG | - | chr3_2:43514438-43514457 | Msa0406740:exon | 45.0% | |
| TCGTACCTGCTTACTTGATG+TGG | + | chr3_2:43514446-43514465 | None:intergenic | 45.0% | |
| TGGTCATTGACGGCAATGTT+TGG | - | chr3_2:43514525-43514544 | Msa0406740:intron | 45.0% | |
| CCCTTGAAAGGACTGAGAAT+TGG | - | chr3_2:43514736-43514755 | Msa0406740:intron | 45.0% | |
| ATTAGGATGCTCTGTGAACG+AGG | - | chr3_2:43514840-43514859 | Msa0406740:intron | 45.0% | |
| CAGTGACACCTGCAAGTTAA+TGG | + | chr3_2:43514973-43514992 | None:intergenic | 45.0% | |
| AAAGCGAGGACATAGTATGC+TGG | + | chr3_2:43515017-43515036 | None:intergenic | 45.0% | |
| TCCAACTTGTCTCGCTATGA+TGG | - | chr3_2:43515050-43515069 | Msa0406740:intron | 45.0% | |
| ACCATCATAGCGAGACAAGT+TGG | + | chr3_2:43515054-43515073 | None:intergenic | 45.0% | |
| TTTGGACGAAGAGAGTGAGA+GGG | + | chr3_2:43515106-43515125 | None:intergenic | 45.0% | |
| GATGAGCTTGACTCTCTCTA+TGG | - | chr3_2:43515240-43515259 | Msa0406740:intron | 45.0% | |
| TACCTCAGAACCTAACCCTT+TGG | + | chr3_2:43515277-43515296 | None:intergenic | 45.0% | |
| ATATTACAAACGAGCGCAGC+AGG | - | chr3_2:43515645-43515664 | Msa0406740:intron | 45.0% | |
| GAACGTCGATAAGACAACCT+AGG | + | chr3_2:43515919-43515938 | None:intergenic | 45.0% | |
| GATCCTTTGGCTATGTATGC+TGG | - | chr3_2:43516195-43516214 | Msa0406740:intron | 45.0% | |
| TCACCAGCATACATAGCCAA+AGG | + | chr3_2:43516201-43516220 | None:intergenic | 45.0% | |
| TTCGCTGGGATACTCCTTTA+TGG | + | chr3_2:43516583-43516602 | None:intergenic | 45.0% | |
| TCTGCTGTGTAGTTGAGACA+CGG | + | chr3_2:43516667-43516686 | None:intergenic | 45.0% | |
| GATTGGTGCAGCGTTTAATG+AGG | - | chr3_2:43517069-43517088 | Msa0406740:intron | 45.0% | |
| ! | CACTGAACTTCGTGTTGATG+GGG | - | chr3_2:43517114-43517133 | Msa0406740:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr3_2:43517222-43517241 | Msa0406740:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr3_2:43517223-43517242 | Msa0406740:intron | 45.0% |
| ATAGAGGAAAATGGGAGAGG+AGG | - | chr3_2:43517282-43517301 | Msa0406740:intron | 45.0% | |
| TAGAGGAAAATGGGAGAGGA+GGG | - | chr3_2:43517283-43517302 | Msa0406740:intron | 45.0% | |
| ACAAAACCCTCCTCATTTGG+AGG | - | chr3_2:43517334-43517353 | Msa0406740:intron | 45.0% | |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr3_2:43517368-43517387 | Msa0406740:intron | 45.0% |
| !! | AGGAAAGGAAAGGCTTTGAG+GGG | + | chr3_2:43517555-43517574 | None:intergenic | 45.0% |
| GAAGGAAAGGAAAGGCTTTG+AGG | + | chr3_2:43517557-43517576 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr3_2:43517579-43517598 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr3_2:43517580-43517599 | None:intergenic | 45.0% |
| !! | CACTCCCTTAGGCTTTGTTT+GGG | + | chr3_2:43517591-43517610 | None:intergenic | 45.0% |
| !! | ACACTCCCTTAGGCTTTGTT+TGG | + | chr3_2:43517592-43517611 | None:intergenic | 45.0% |
| TGCCTTGCAGTTACTTAGGA+GGG | - | chr3_2:43517815-43517834 | Msa0406740:intron | 45.0% | |
| TACCCTCCTAAGTAACTGCA+AGG | + | chr3_2:43517820-43517839 | None:intergenic | 45.0% | |
| CGGTTAATAGGAGACAAAGG+GGG | + | chr3_2:43518195-43518214 | None:intergenic | 45.0% | |
| CTCCTTTCTTTCTTGGGGAA+TGG | - | chr3_2:43518484-43518503 | Msa0406740:CDS | 45.0% | |
| !! | CTCATGTAATTTTGGGGAGG+GGG | + | chr3_2:43518618-43518637 | None:intergenic | 45.0% |
| GTAGAAAAATGAGGGGTGAG+AGG | + | chr3_2:43518707-43518726 | None:intergenic | 45.0% | |
| ! | TGAGGCAGGTTAGTTCAACT+GGG | + | chr3_2:43518758-43518777 | None:intergenic | 45.0% |
| ! | ATGAGGCAGGTTAGTTCAAC+TGG | + | chr3_2:43518759-43518778 | None:intergenic | 45.0% |
| GGACAAGGAGAATAGTTGTG+AGG | + | chr3_2:43518817-43518836 | None:intergenic | 45.0% | |
| TATTCTCCTTGTCCTCAAGG+TGG | - | chr3_2:43518823-43518842 | Msa0406740:intron | 45.0% | |
| CACACACAAGGGTTCATAAC+AGG | + | chr3_2:43518899-43518918 | None:intergenic | 45.0% | |
| AGTGACTCAGTCACACACAA+GGG | + | chr3_2:43518910-43518929 | None:intergenic | 45.0% | |
| GATATCAGCTGCTTATCGAC+TGG | + | chr3_2:43518956-43518975 | None:intergenic | 45.0% | |
| AAGTAAAGGATTGGGGCCTT+TGG | + | chr3_2:43519055-43519074 | None:intergenic | 45.0% | |
| !! | GAACTTAAGAGGGTACCAGT+GGG | + | chr3_2:43519452-43519471 | None:intergenic | 45.0% |
| !! | TGAACTTAAGAGGGTACCAG+TGG | + | chr3_2:43519453-43519472 | None:intergenic | 45.0% |
| TCAAGGCTATCAGCTACGAT+TGG | + | chr3_2:43520045-43520064 | None:intergenic | 45.0% | |
| AGCCTTGAATAACAAGGGGA+AGG | - | chr3_2:43520057-43520076 | Msa0406740:CDS | 45.0% | |
| GCCTTGAATAACAAGGGGAA+GGG | - | chr3_2:43520058-43520077 | Msa0406740:CDS | 45.0% | |
| !! | TCCCTTCCCCTTGTTATTCA+AGG | + | chr3_2:43520062-43520081 | None:intergenic | 45.0% |
| GAAGGGATCGTTCTACATCT+TGG | - | chr3_2:43520075-43520094 | Msa0406740:CDS | 45.0% | |
| TGGCTGAAGCAGGTATGTTT+AGG | - | chr3_2:43520135-43520154 | Msa0406740:CDS | 45.0% | |
| GGCTGAAGCAGGTATGTTTA+GGG | - | chr3_2:43520136-43520155 | Msa0406740:CDS | 45.0% | |
| GTAAAGGAGCAACTGCTCAT+CGG | - | chr3_2:43520420-43520439 | Msa0406740:intron | 45.0% | |
| !!! | ATTTTTATTTTATTTTTTGA+AGG | + | chr3_2:43519924-43519943 | None:intergenic | 5.0% |
| TTACCCAACCCACCCATAGA+CGG | + | chr3_2:43514029-43514048 | None:intergenic | 50.0% | |
| ! | CAACCCGTGGGATGTTTCTA+GGG | - | chr3_2:43514156-43514175 | Msa0406740:three_prime_UTR | 50.0% |
| CAACGATACAACACACTGCC+TGG | + | chr3_2:43514224-43514243 | None:intergenic | 50.0% | |
| CAGGCAGTGTGTTGTATCGT+TGG | - | chr3_2:43514222-43514241 | Msa0406740:three_prime_UTR | 50.0% | |
| TCGTTGGGAAGTGATACTGG+TGG | - | chr3_2:43514238-43514257 | Msa0406740:three_prime_UTR | 50.0% | |
| ! | GTGATACTGGTGGAAGTGTG+AGG | - | chr3_2:43514248-43514267 | Msa0406740:three_prime_UTR | 50.0% |
| TATGGGCGCGTCTCAAGATT+TGG | - | chr3_2:43514313-43514332 | Msa0406740:three_prime_UTR | 50.0% | |
| GCATCATCGCTTGATGCCAT+TGG | - | chr3_2:43514349-43514368 | Msa0406740:three_prime_UTR | 50.0% | |
| ! | CTTGATGCCATTGGCTGCTT+TGG | - | chr3_2:43514358-43514377 | Msa0406740:three_prime_UTR | 50.0% |
| CGATGAACCAAAGCAGCCAA+TGG | + | chr3_2:43514368-43514387 | None:intergenic | 50.0% | |
| CATGACCAGCAATTGCATGG+AGG | + | chr3_2:43514411-43514430 | None:intergenic | 50.0% | |
| ! | TCACTGCCATCCTTTTCGCT+TGG | - | chr3_2:43514987-43515006 | Msa0406740:intron | 50.0% |
| ! | CACTGCCATCCTTTTCGCTT+GGG | - | chr3_2:43514988-43515007 | Msa0406740:intron | 50.0% |
| ! | AGAGAGTGAGAGGGGTACAT+GGG | + | chr3_2:43515097-43515116 | None:intergenic | 50.0% |
| ! | AAGAGAGTGAGAGGGGTACA+TGG | + | chr3_2:43515098-43515117 | None:intergenic | 50.0% |
| TTGGACGAAGAGAGTGAGAG+GGG | + | chr3_2:43515105-43515124 | None:intergenic | 50.0% | |
| GTTTGGACGAAGAGAGTGAG+AGG | + | chr3_2:43515107-43515126 | None:intergenic | 50.0% | |
| TATGGTGAATCCCGAGCCAA+AGG | - | chr3_2:43515258-43515277 | Msa0406740:intron | 50.0% | |
| ATGGTGAATCCCGAGCCAAA+GGG | - | chr3_2:43515259-43515278 | Msa0406740:intron | 50.0% | |
| ! | AGAACCTAACCCTTTGGCTC+GGG | + | chr3_2:43515271-43515290 | None:intergenic | 50.0% |
| CAGAACCTAACCCTTTGGCT+CGG | + | chr3_2:43515272-43515291 | None:intergenic | 50.0% | |
| AGCCAAAGGGTTAGGTTCTG+AGG | - | chr3_2:43515272-43515291 | Msa0406740:intron | 50.0% | |
| ! | TGGTAGCGTTATTCTCCCTC+CGG | - | chr3_2:43515343-43515362 | Msa0406740:intron | 50.0% |
| GGCATAAACCAGCAGTTCTG+TGG | + | chr3_2:43516433-43516452 | None:intergenic | 50.0% | |
| CCACATGGTAAAACCAAGGC+AGG | + | chr3_2:43517004-43517023 | None:intergenic | 50.0% | |
| !!! | CCTGCCTTGGTTTTACCATG+TGG | - | chr3_2:43517001-43517020 | Msa0406740:intron | 50.0% |
| TCATTTGCAGGCCAACAGGA+AGG | + | chr3_2:43517051-43517070 | None:intergenic | 50.0% | |
| CCAATCATTTGCAGGCCAAC+AGG | + | chr3_2:43517055-43517074 | None:intergenic | 50.0% | |
| ! | CCTGTTGGCCTGCAAATGAT+TGG | - | chr3_2:43517052-43517071 | Msa0406740:intron | 50.0% |
| ACGCTGCACCAATCATTTGC+AGG | + | chr3_2:43517063-43517082 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr3_2:43517221-43517240 | Msa0406740:intron | 50.0% |
| AGGGGAAGGCTTGGGAAAAA+AGG | - | chr3_2:43517241-43517260 | Msa0406740:intron | 50.0% | |
| AAAATGGGAGAGGAGGGCTT+TGG | - | chr3_2:43517289-43517308 | Msa0406740:intron | 50.0% | |
| AAATGGGAGAGGAGGGCTTT+GGG | - | chr3_2:43517290-43517309 | Msa0406740:intron | 50.0% | |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr3_2:43517369-43517388 | Msa0406740:intron | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | - | chr3_2:43517370-43517389 | Msa0406740:intron | 50.0% |
| TTGGAGGGGAAGGAAAGGAA+AGG | + | chr3_2:43517565-43517584 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr3_2:43517581-43517600 | None:intergenic | 50.0% |
| TGGGTGCCTTGCAGTTACTT+AGG | - | chr3_2:43517811-43517830 | Msa0406740:intron | 50.0% | |
| GTGCCTTGCAGTTACTTAGG+AGG | - | chr3_2:43517814-43517833 | Msa0406740:intron | 50.0% | |
| ATCATTCCCACCCTTTGTGC+TGG | - | chr3_2:43517885-43517904 | Msa0406740:intron | 50.0% | |
| TCATTCCCACCCTTTGTGCT+GGG | - | chr3_2:43517886-43517905 | Msa0406740:intron | 50.0% | |
| TCATACCCAGCACAAAGGGT+GGG | + | chr3_2:43517894-43517913 | None:intergenic | 50.0% | |
| TTCATACCCAGCACAAAGGG+TGG | + | chr3_2:43517895-43517914 | None:intergenic | 50.0% | |
| AGATGTCCACCTTGAGGACA+AGG | + | chr3_2:43518832-43518851 | None:intergenic | 50.0% | |
| CAGTGACTCAGTCACACACA+AGG | + | chr3_2:43518911-43518930 | None:intergenic | 50.0% | |
| CTTGTGTGTGACTGAGTCAC+TGG | - | chr3_2:43518909-43518928 | Msa0406740:intron | 50.0% | |
| CTGAGTCACTGGTCCAAGAT+CGG | - | chr3_2:43518920-43518939 | Msa0406740:intron | 50.0% | |
| TGGTATCAGAGCTCCGATCT+TGG | + | chr3_2:43518936-43518955 | None:intergenic | 50.0% | |
| ! | GGTTTGCTCGTCCTAACCAA+AGG | - | chr3_2:43519036-43519055 | Msa0406740:intron | 50.0% |
| AAGGATTGGGGCCTTTGGTT+AGG | + | chr3_2:43519050-43519069 | None:intergenic | 50.0% | |
| AGGCTATCAGCTACGATTGG+TGG | + | chr3_2:43520042-43520061 | None:intergenic | 50.0% | |
| TAAAATGCGGTGGCTGAAGC+AGG | - | chr3_2:43520125-43520144 | Msa0406740:CDS | 50.0% | |
| TTCTCCGTCTATGGGTGGGT+TGG | - | chr3_2:43514022-43514041 | Msa0406740:intron | 55.0% | |
| ! | TCTCCGTCTATGGGTGGGTT+GGG | - | chr3_2:43514023-43514042 | Msa0406740:intron | 55.0% |
| AATAGGTGACTGCCAACCCG+TGG | - | chr3_2:43514143-43514162 | Msa0406740:three_prime_UTR | 55.0% | |
| ATAGGTGACTGCCAACCCGT+GGG | - | chr3_2:43514144-43514163 | Msa0406740:three_prime_UTR | 55.0% | |
| CCTAGAAACATCCCACGGGT+TGG | + | chr3_2:43514158-43514177 | None:intergenic | 55.0% | |
| CCAACCCGTGGGATGTTTCT+AGG | - | chr3_2:43514155-43514174 | Msa0406740:three_prime_UTR | 55.0% | |
| GCACCCTAGAAACATCCCAC+GGG | + | chr3_2:43514162-43514181 | None:intergenic | 55.0% | |
| GGCACCCTAGAAACATCCCA+CGG | + | chr3_2:43514163-43514182 | None:intergenic | 55.0% | |
| !! | TGGGATGTTTCTAGGGTGCC+AGG | - | chr3_2:43514163-43514182 | Msa0406740:three_prime_UTR | 55.0% |
| !! | GATGTTTCTAGGGTGCCAGG+AGG | - | chr3_2:43514166-43514185 | Msa0406740:three_prime_UTR | 55.0% |
| AGGAGGATCATCCGGAGGAT+CGG | - | chr3_2:43514183-43514202 | Msa0406740:three_prime_UTR | 55.0% | |
| ! | AGGCAGCCGGCATCATTTTG+CGG | - | chr3_2:43514268-43514287 | Msa0406740:three_prime_UTR | 55.0% |
| CTTGAGACGCGCCCATATGT+TGG | + | chr3_2:43514310-43514329 | None:intergenic | 55.0% | |
| GTTCATCGGTCGCTGATGCT+GGG | - | chr3_2:43514380-43514399 | Msa0406740:three_prime_UTR | 55.0% | |
| GGCAACCCAAGCGAAAAGGA+TGG | + | chr3_2:43514996-43515015 | None:intergenic | 55.0% | |
| TGCTGGCAACCCAAGCGAAA+AGG | + | chr3_2:43515000-43515019 | None:intergenic | 55.0% | |
| ! | GAGAGTGAGAGGGGTACATG+GGG | + | chr3_2:43515096-43515115 | None:intergenic | 55.0% |
| GAATCCCGAGCCAAAGGGTT+AGG | - | chr3_2:43515264-43515283 | Msa0406740:intron | 55.0% | |
| GGGACATATGCCCTTTCAGC+TGG | - | chr3_2:43515610-43515629 | Msa0406740:intron | 55.0% | |
| ! | GAATAGCTTCAAGGAGGCGC+TGG | - | chr3_2:43516020-43516039 | Msa0406740:intron | 55.0% |
| AAGCAGCTGAAGGAGCTGCA+GGG | + | chr3_2:43516068-43516087 | None:intergenic | 55.0% | |
| TAAGCAGCTGAAGGAGCTGC+AGG | + | chr3_2:43516069-43516088 | None:intergenic | 55.0% | |
| !! | AGAGCTTCCAGGCATTGAGC+TGG | - | chr3_2:43516407-43516426 | Msa0406740:intron | 55.0% |
| AGGCCAACAGGAAGGCCATT+CGG | + | chr3_2:43517043-43517062 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr3_2:43517227-43517246 | Msa0406740:intron | 55.0% | |
| GAGTTTGGAGGGGAAGGCTT+GGG | - | chr3_2:43517233-43517252 | Msa0406740:intron | 55.0% | |
| AATGGGAGAGGAGGGCTTTG+GGG | - | chr3_2:43517291-43517310 | Msa0406740:intron | 55.0% | |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | - | chr3_2:43517376-43517395 | Msa0406740:intron | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | - | chr3_2:43517379-43517398 | Msa0406740:intron | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | - | chr3_2:43517380-43517399 | Msa0406740:intron | 55.0% |
| GGAGTTTGGAGGGGAAGGAA+AGG | + | chr3_2:43517570-43517589 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr3_2:43517575-43517594 | None:intergenic | 55.0% | |
| !! | GGTGGTCTTATGCTCCCTGT+TGG | - | chr3_2:43518454-43518473 | Msa0406740:CDS | 55.0% |
| GTGTCTACTCCTTCCTAGCC+CGG | - | chr3_2:43518654-43518673 | Msa0406740:intron | 55.0% | |
| TGTCTACTCCTTCCTAGCCC+GGG | - | chr3_2:43518655-43518674 | Msa0406740:intron | 55.0% | |
| TGAAGGATTGGGGCCTATCC+CGG | + | chr3_2:43518676-43518695 | None:intergenic | 55.0% | |
| !! | GTTGTGAGGGGTGTCTTGTG+AGG | + | chr3_2:43518803-43518822 | None:intergenic | 55.0% |
| ! | AGGGTGCCAGGAGGATCATC+CGG | - | chr3_2:43514175-43514194 | Msa0406740:three_prime_UTR | 60.0% |
| GATCCTCCGGATGATCCTCC+TGG | + | chr3_2:43514184-43514203 | None:intergenic | 60.0% | |
| AACTGCAGCTGCCGATCCTC+CGG | + | chr3_2:43514197-43514216 | None:intergenic | 60.0% | |
| ! | TGGTGGAAGTGTGAGGCAGC+CGG | - | chr3_2:43514255-43514274 | Msa0406740:three_prime_UTR | 60.0% |
| GGTTCATCGGTCGCTGATGC+TGG | - | chr3_2:43514379-43514398 | Msa0406740:three_prime_UTR | 60.0% | |
| AGCAGCTGAAGGAGCTGCAG+GGG | + | chr3_2:43516067-43516086 | None:intergenic | 60.0% | |
| TCTGTGGCCAGCTCAATGCC+TGG | + | chr3_2:43516417-43516436 | None:intergenic | 60.0% | |
| TGAGCTGGCCACAGAACTGC+TGG | - | chr3_2:43516422-43516441 | Msa0406740:intron | 60.0% | |
| CCAAGGCAGGTAGTCCAGCT+AGG | + | chr3_2:43516991-43517010 | None:intergenic | 60.0% | |
| CCTAGCTGGACTACCTGCCT+TGG | - | chr3_2:43516988-43517007 | Msa0406740:intron | 60.0% | |
| GGACCGAATGGCCTTCCTGT+TGG | - | chr3_2:43517037-43517056 | Msa0406740:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGCT+TGG | - | chr3_2:43517232-43517251 | Msa0406740:intron | 60.0% | |
| ! | ATGGGAGAGGAGGGCTTTGG+GGG | - | chr3_2:43517292-43517311 | Msa0406740:intron | 60.0% |
| ACTCCTTCCTAGCCCGGGAT+AGG | - | chr3_2:43518660-43518679 | Msa0406740:intron | 60.0% | |
| GAAGGATTGGGGCCTATCCC+GGG | + | chr3_2:43518675-43518694 | None:intergenic | 60.0% | |
| CAGGGAGAGCTGCTGAGAGT+GGG | - | chr3_2:43519976-43519995 | Msa0406740:intron | 60.0% | |
| GTGCCAGGAGGATCATCCGG+AGG | - | chr3_2:43514178-43514197 | Msa0406740:three_prime_UTR | 65.0% | |
| CGGCAGCTGCAGTTTCTGCC+AGG | - | chr3_2:43514203-43514222 | Msa0406740:three_prime_UTR | 65.0% | |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | - | chr3_2:43517293-43517312 | Msa0406740:intron | 65.0% |
| ATTGGGGCCTATCCCGGGCT+AGG | + | chr3_2:43518670-43518689 | None:intergenic | 65.0% | |
| GCAGGGAGAGCTGCTGAGAG+TGG | - | chr3_2:43519975-43519994 | Msa0406740:intron | 65.0% | |
| ! | GGGCCTATCCCGGGCTAGGA+AGG | + | chr3_2:43518666-43518685 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 43514015 | 43520492 | 43514015 | ID=Msa0406740;Name=Msa0406740 |
| chr3_2 | mRNA | 43514015 | 43520492 | 43514015 | ID=Msa0406740-mRNA-1;Parent=Msa0406740;Name=Msa0406740-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.90|0.83|0.91|0.63|0.58|12|378|372 |
| chr3_2 | exon | 43514015 | 43514028 | 43514015 | ID=Msa0406740-mRNA-1:exon:8432;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43514055 | 43514113 | 43514055 | ID=Msa0406740-mRNA-1:exon:8431;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43514134 | 43514528 | 43514134 | ID=Msa0406740-mRNA-1:exon:8430;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43517417 | 43517530 | 43517417 | ID=Msa0406740-mRNA-1:exon:8429;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43518277 | 43518326 | 43518277 | ID=Msa0406740-mRNA-1:exon:8428;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43518411 | 43518504 | 43518411 | ID=Msa0406740-mRNA-1:exon:8427;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43518841 | 43518918 | 43518841 | ID=Msa0406740-mRNA-1:exon:8426;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43519214 | 43519289 | 43519214 | ID=Msa0406740-mRNA-1:exon:8425;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43519429 | 43519523 | 43519429 | ID=Msa0406740-mRNA-1:exon:8424;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43519646 | 43519825 | 43519646 | ID=Msa0406740-mRNA-1:exon:8423;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43520048 | 43520359 | 43520048 | ID=Msa0406740-mRNA-1:exon:8422;Parent=Msa0406740-mRNA-1 |
| chr3_2 | exon | 43520463 | 43520492 | 43520463 | ID=Msa0406740-mRNA-1:exon:8421;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43520463 | 43520492 | 43520463 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43520048 | 43520359 | 43520048 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43519646 | 43519825 | 43519646 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43519429 | 43519523 | 43519429 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43519214 | 43519289 | 43519214 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43518841 | 43518918 | 43518841 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43518411 | 43518504 | 43518411 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43518277 | 43518326 | 43518277 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43517417 | 43517530 | 43517417 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | CDS | 43514439 | 43514528 | 43514439 | ID=Msa0406740-mRNA-1:cds;Parent=Msa0406740-mRNA-1 |
| chr3_2 | three_prime_UTR | 43514134 | 43514438 | 43514134 | ID=Msa0406740-mRNA-1:three_prime_utr;Parent=Msa0406740-mRNA-1 |
| chr3_2 | three_prime_UTR | 43514055 | 43514113 | 43514055 | ID=Msa0406740-mRNA-1:three_prime_utr;Parent=Msa0406740-mRNA-1 |
| chr3_2 | three_prime_UTR | 43514015 | 43514028 | 43514015 | ID=Msa0406740-mRNA-1:three_prime_utr;Parent=Msa0406740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
