AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1238700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238700 MtrunA17_Chr8g0350181 94.603 667 29 1 1 667 1 660 0.0 1261
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238700 AT2G31890.1 67.138 566 185 1 86 650 102 667 0.0 731

Find 166 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTTACTTACTTTAAAT+AGG 0.178036 8_2:-19350647 Msa1238700:CDS
CGCCAAGTTCTCGTGGTAAC+TGG 0.239282 8_2:+19351929 None:intergenic
ATAGAAGATTTACTTGATTA+TGG 0.247712 8_2:-19351500 Msa1238700:CDS
GCCGTCTCTTCTCTCCTTCT+TGG 0.253764 8_2:-19352382 Msa1238700:intron
AAGAACAAACAAGTGATTTC+TGG 0.261597 8_2:+19352437 None:intergenic
GGAAGGGTTATTGAATTCTT+TGG 0.291031 8_2:-19352008 Msa1238700:CDS
GCTTGGTCCTATGCTGTCTT+TGG 0.292707 8_2:-19350606 Msa1238700:CDS
TTGAGGATAATTGAAAAGTA+TGG 0.300615 8_2:-19352029 Msa1238700:exon
AACTTTACTTACTTTAAATA+GGG 0.303023 8_2:-19350646 Msa1238700:CDS
GGCTTATGCAATGGAAGATT+TGG 0.304299 8_2:-19351606 Msa1238700:CDS
ACCGATTTGTTCATTATTGT+TGG 0.305910 8_2:+19350698 None:intergenic
AGATATCATGTTTGCTTCTC+AGG 0.310999 8_2:-19350499 Msa1238700:CDS
CTTCTCAAATCACTTTCCTT+TGG 0.312687 8_2:+19351449 None:intergenic
TCATCGCATTGCTAAGAATA+TGG 0.316718 8_2:-19351180 Msa1238700:CDS
AAACCCTTTGCTCCTCAAAA+TGG 0.319665 8_2:+19350538 None:intergenic
CAAAACATTGCTAACATTGC+AGG 0.324391 8_2:-19350936 Msa1238700:CDS
ATCAGAGTTTGTCGGGGAAT+TGG 0.338938 8_2:-19351762 Msa1238700:CDS
TATGGTTCAGAGGAAGAGTT+TGG 0.340010 8_2:-19351482 Msa1238700:CDS
GTCAAAGAATATGTTGTAGA+TGG 0.342480 8_2:-19350300 Msa1238700:CDS
AAGAAGTTCGCCTCCAACTT+TGG 0.346703 8_2:+19351022 None:intergenic
GAAGTTTCTTCTCTTATGTA+TGG 0.347428 8_2:-19350572 Msa1238700:CDS
GACGTTTCTTAATGATAGTA+TGG 0.351740 8_2:+19349093 None:intergenic
ATTCCTTGAGCTGAGCATTC+AGG 0.352455 8_2:+19351068 None:intergenic
AATAGACTGTCTCAATTCTC+TGG 0.368929 8_2:-19351359 Msa1238700:CDS
TCATCAAACTTAAACCTGTT+TGG 0.369878 8_2:-19352066 Msa1238700:five_prime_UTR
TTGTATCTGTTGATCGAAAC+GGG 0.370584 8_2:-19350674 Msa1238700:CDS
TTGTTAGCACTGGACTTGAA+TGG 0.376921 8_2:-19350323 Msa1238700:CDS
ACACATTTCTCTAGAAATAC+TGG 0.398436 8_2:-19350219 Msa1238700:intron
GAGAGAAGAGACGGCTCCTC+AGG 0.414701 8_2:+19352390 None:intergenic
TAACGGAGAGGAGTCTGATA+TGG 0.415258 8_2:-19351792 Msa1238700:CDS
TTGAGAGCTGACCTCTTGAT+AGG 0.415647 8_2:+19349753 None:intergenic
CTATGCTGTCTTTGGACAAA+TGG 0.416506 8_2:-19350598 Msa1238700:CDS
ACAATTGTCGCGGTTGCAAA+AGG 0.421350 8_2:-19351248 Msa1238700:CDS
CAAAGGGTTTAAAACAACTT+TGG 0.423201 8_2:+19351981 None:intergenic
AGGAGATAGATTGGCTGCAT+TGG 0.425081 8_2:-19351825 Msa1238700:CDS
GTTACCGAGCTCCGAAGAAA+AGG 0.425877 8_2:-19351730 Msa1238700:CDS
AGTCGATAAGAAGCTTGCTT+TGG 0.428233 8_2:-19350256 Msa1238700:CDS
AACTTCGTCGTTTCAGAAAG+AGG 0.432282 8_2:-19350358 Msa1238700:CDS
GAAATAATTCACACTTTCAA+AGG 0.434691 8_2:-19350849 Msa1238700:CDS
GGTCATCTTCTTGTTAGCAC+TGG 0.437852 8_2:-19350333 Msa1238700:CDS
GACAGTTCAGCGAAAAGATC+GGG 0.438484 8_2:+19350885 None:intergenic
CTGCAGTGGGAGGAACTTCA+AGG 0.440694 8_2:-19349327 Msa1238700:intron
TGGTTGATTTGTACTCTTTG+AGG 0.441717 8_2:-19352046 Msa1238700:five_prime_UTR
ATTGGGAATCAGAGTTTGTC+GGG 0.442092 8_2:-19351769 Msa1238700:CDS
CGACAGTTCAGCGAAAAGAT+CGG 0.442547 8_2:+19350884 None:intergenic
GTCGGGGAATTGGATCCGTT+TGG 0.444529 8_2:-19351752 Msa1238700:CDS
GAGAGGAGTCTGATATGGAT+TGG 0.456624 8_2:-19351787 Msa1238700:CDS
AAGGAATCTCAAACATAGCT+TGG 0.457912 8_2:-19351052 Msa1238700:CDS
TCAAGCACTGGTTTACAAGA+TGG 0.458479 8_2:+19350475 None:intergenic
AAAGAGATGTCTATGCTTGT+CGG 0.459089 8_2:-19351110 Msa1238700:CDS
TCCCAGTTACCACGAGAACT+TGG 0.459982 8_2:-19351931 Msa1238700:CDS
TGAAATGTTTGCAGAAAATA+CGG 0.460460 8_2:-19351405 Msa1238700:CDS
TTTCGCTGAACTGTCGAAAA+GGG 0.463715 8_2:-19350877 Msa1238700:CDS
GGGAAATTATAACTAACTCT+TGG 0.464356 8_2:+19351950 None:intergenic
TGTTAGCACTGGACTTGAAT+GGG 0.465246 8_2:-19350322 Msa1238700:CDS
GGAATTCAAGTTTCAAGCAC+TGG 0.470390 8_2:+19350463 None:intergenic
GAGCAGTAGCAATATTCAAA+GGG 0.471944 8_2:+19351204 None:intergenic
AAATCACTTTCCTTTGGCTG+TGG 0.472714 8_2:+19351455 None:intergenic
CTGAACAGGTGGAGTACCTA+AGG 0.484246 8_2:-19349299 Msa1238700:CDS
CTTTAAATAGGGATCAGCTT+GGG 0.484370 8_2:-19350635 Msa1238700:CDS
TTTATCAATAACTCACAAAA+GGG 0.486133 8_2:+19352109 None:intergenic
AGAGTACAAATCAACCAAAC+AGG 0.486484 8_2:+19352052 None:intergenic
CACCTACGAAACCTTTCGAT+TGG 0.487136 8_2:+19350730 None:intergenic
AGAGGAGTCTGATATGGATT+GGG 0.487748 8_2:-19351786 Msa1238700:CDS
AAAGGGTTTCAGAGCTGTAT+CGG 0.491181 8_2:-19350524 Msa1238700:CDS
TCCAACAATAATGAACAAAT+CGG 0.492543 8_2:-19350699 Msa1238700:CDS
ACTTCAAGGAGGGTCTGAAC+AGG 0.493250 8_2:-19349313 Msa1238700:CDS
GTCTCTATGCGGTGAGCTTG+AGG 0.498153 8_2:-19350427 Msa1238700:CDS
GCTTAAACGTCGATACATTA+CGG 0.499114 8_2:-19349803 Msa1238700:CDS
AAAGAAGGTTGAGGAGAAGG+TGG 0.499984 8_2:-19351558 Msa1238700:CDS
AGGAATCTCAAACATAGCTT+GGG 0.501827 8_2:-19351051 Msa1238700:CDS
TTGCAGAAAATACGGAGAAA+AGG 0.502813 8_2:-19351397 Msa1238700:CDS
TATGATGAAAACTCGAAGAC+TGG 0.509881 8_2:-19351147 Msa1238700:CDS
AAGAAAAGAAACAAAACAGT+TGG 0.510323 8_2:+19348853 None:intergenic
AAATAATTCACACTTTCAAA+GGG 0.517159 8_2:-19350848 Msa1238700:CDS
AGATTGCACTGACTAAAGTC+GGG 0.519987 8_2:-19350971 Msa1238700:CDS
GAGATTGCACTGACTAAAGT+CGG 0.521548 8_2:-19350972 Msa1238700:CDS
GCCAAGTTCTCGTGGTAACT+GGG 0.523815 8_2:+19351930 None:intergenic
TTAAGCATGGTATGTCCTAA+AGG 0.524947 8_2:+19349820 None:intergenic
GCTTGGGCGCTGTCCAAAGT+TGG 0.525349 8_2:-19351035 Msa1238700:CDS
TTGGTGTGTGAGGGCGAGAG+AGG 0.528486 8_2:-19351660 Msa1238700:CDS
ATCAGCTTGGGACTATAGCT+TGG 0.529050 8_2:-19350623 Msa1238700:CDS
CGTCGATACATTACGGCTGC+CGG 0.529125 8_2:-19349796 Msa1238700:CDS
TTCGGAGCTCGGTAACCAAA+CGG 0.529938 8_2:+19351737 None:intergenic
GTTGTATCTGTTGATCGAAA+CGG 0.531354 8_2:-19350675 Msa1238700:CDS
CAACGATACGAGTTTCCAAC+CGG 0.531834 8_2:+19349777 None:intergenic
GATAGTAAAGCCGGTGCTAG+AGG 0.534515 8_2:-19351845 Msa1238700:CDS
AAGGGTTTCAGAGCTGTATC+GGG 0.534817 8_2:-19350523 Msa1238700:CDS
GAGGATAAAGTTTCCAGCGC+TGG 0.535251 8_2:-19350408 Msa1238700:CDS
GAATCAAATACAGTGTCAGC+AGG 0.536610 8_2:+19350780 None:intergenic
TGGGCGCTGTCCAAAGTTGG+AGG 0.536614 8_2:-19351032 Msa1238700:CDS
ACTCTTGGAGTGAAACCAAA+GGG 0.537314 8_2:+19351965 None:intergenic
CGGTGCTAGAGGAGATAGAT+TGG 0.539783 8_2:-19351834 Msa1238700:CDS
GTTTGGACTGCCACAGCCAA+AGG 0.542148 8_2:-19351465 Msa1238700:CDS
GATTGGGAATCAGAGTTTGT+CGG 0.543250 8_2:-19351770 Msa1238700:CDS
AGCCTTGTATATTTGTTAGA+CGG 0.543545 8_2:-19349137 Msa1238700:three_prime_UTR
AATCGATTAAAGCGAAGGGT+AGG 0.547508 8_2:-19351628 Msa1238700:CDS
ATAGACTGTCTCAATTCTCT+GGG 0.548337 8_2:-19351358 Msa1238700:CDS
TCGTCGTTTCAGAAAGAGGT+TGG 0.549276 8_2:-19350354 Msa1238700:CDS
TTCAAAGGGGAGAGAGGTGA+GGG 0.552828 8_2:+19351218 None:intergenic
TTGCCTGAATGCTCAGCTCA+AGG 0.556576 8_2:-19351071 Msa1238700:CDS
TTCCGTCTAACAAATATACA+AGG 0.558352 8_2:+19349135 None:intergenic
CATAGAGACAACTGAAGATG+TGG 0.559818 8_2:+19350441 None:intergenic
CAATCTATCTCCTCTAGCAC+CGG 0.560589 8_2:+19351835 None:intergenic
TTACCGAGCTCCGAAGAAAA+GGG 0.560642 8_2:-19351729 Msa1238700:CDS
TCAAAGAATATGTTGTAGAT+GGG 0.560728 8_2:-19350299 Msa1238700:CDS
GCAATATTCAAAGGGGAGAG+AGG 0.561399 8_2:+19351212 None:intergenic
AGAGCAGTAGCAATATTCAA+AGG 0.561512 8_2:+19351203 None:intergenic
GCTTGAGGATACCGATGGAA+TGG 0.566585 8_2:-19351684 Msa1238700:CDS
GAATATGAAACTCACCAAGA+AGG 0.566627 8_2:+19352368 None:intergenic
TTTGATAGAGATAGTAAAGC+CGG 0.570770 8_2:-19351854 Msa1238700:CDS
TTGAGCTGAGCATTCAGGCA+AGG 0.571147 8_2:+19351073 None:intergenic
ATTTAAACGCCAAGTTCTCG+TGG 0.571729 8_2:+19351922 None:intergenic
GGATAATTGAAAAGTATGGA+AGG 0.572370 8_2:-19352025 Msa1238700:exon
ATCGATTAAAGCGAAGGGTA+GGG 0.575049 8_2:-19351627 Msa1238700:CDS
TTTACTTGATTATGGTTCAG+AGG 0.575949 8_2:-19351492 Msa1238700:CDS
ACTTTAAATAGGGATCAGCT+TGG 0.576268 8_2:-19350636 Msa1238700:CDS
GAAGATCATTGCCAATCGAA+AGG 0.576493 8_2:-19350741 Msa1238700:CDS
GATAGATTGGCTGCATTGGA+TGG 0.577186 8_2:-19351821 Msa1238700:CDS
CAAAGGAAAGTGATTTGAGA+AGG 0.581889 8_2:-19351448 Msa1238700:CDS
GATACATTACGGCTGCCGGT+TGG 0.588016 8_2:-19349792 Msa1238700:CDS
ATTGAAATCGATTAAAGCGA+AGG 0.591251 8_2:-19351633 Msa1238700:CDS
ACCAAGAAGGAGAGAAGAGA+CGG 0.592219 8_2:+19352381 None:intergenic
TCAAGGAGGGTCTGAACAGG+TGG 0.593274 8_2:-19349310 Msa1238700:CDS
AAGCTTGCTTTGGAGATCGA+TGG 0.599041 8_2:-19350246 Msa1238700:CDS
AGTTTGTCGACTAGCTCAGA+TGG 0.599595 8_2:+19349053 None:intergenic
TGTTGTAGATGGGTACACTT+TGG 0.603253 8_2:-19350289 Msa1238700:CDS
CGTATCGTTGTCCTATCAAG+AGG 0.604008 8_2:-19349764 Msa1238700:intron
GATAATTGAAAAGTATGGAA+GGG 0.604646 8_2:-19352024 Msa1238700:exon
AGAAAATACGGAGAAAAGGA+TGG 0.607622 8_2:-19351393 Msa1238700:CDS
ACACAGTCTGCTTTGTCCTG+AGG 0.609180 8_2:-19352406 Msa1238700:five_prime_UTR
AACTCTTGGAGTGAAACCAA+AGG 0.610647 8_2:+19351964 None:intergenic
GAAGGGTAGGGCTTATGCAA+TGG 0.611487 8_2:-19351615 Msa1238700:CDS
CAGACATTCATGCATACACA+AGG 0.612231 8_2:-19348806 Msa1238700:three_prime_UTR
ATTCAAAGGGGAGAGAGGTG+AGG 0.612983 8_2:+19351217 None:intergenic
GCAAAAGTCGAAGTTGCTTG+AGG 0.618329 8_2:-19351699 Msa1238700:CDS
GCATTGGATGGTGATGATAA+CGG 0.618404 8_2:-19351809 Msa1238700:CDS
GCAGACTGCAGATGATGTGT+TGG 0.621746 8_2:-19351285 Msa1238700:CDS
AGGATACCGATGGAATGGAT+TGG 0.626596 8_2:-19351679 Msa1238700:CDS
CACACACCAATCCATTCCAT+CGG 0.628347 8_2:+19351673 None:intergenic
TTGAAATCGATTAAAGCGAA+GGG 0.635470 8_2:-19351632 Msa1238700:CDS
ATGGAATGGATTGGTGTGTG+AGG 0.635612 8_2:-19351670 Msa1238700:CDS
TGGAATGGATTGGTGTGTGA+GGG 0.643530 8_2:-19351669 Msa1238700:CDS
GTGTATGCATGAATGTCTGA+TGG 0.644381 8_2:+19348810 None:intergenic
GTGTGTGAGGGCGAGAGAGG+TGG 0.645809 8_2:-19351657 Msa1238700:CDS
TGAACAGGTGGAGTACCTAA+GGG 0.653442 8_2:-19349298 Msa1238700:CDS
TGCCAATCGAAAGGTTTCGT+AGG 0.653455 8_2:-19350732 Msa1238700:CDS
AATGTATCGACGTTTAAGCA+TGG 0.653806 8_2:+19349807 None:intergenic
TACATACGAAACAATTGTCG+CGG 0.653812 8_2:-19351258 Msa1238700:CDS
AGTGGGAGGAACTTCAAGGA+GGG 0.659979 8_2:-19349323 Msa1238700:CDS
ATAGAGACAACTGAAGATGT+GGG 0.662526 8_2:+19350442 None:intergenic
GTATTTCTAGAGAAATGTGT+AGG 0.665375 8_2:+19350222 None:intergenic
AGCAGTAGCAATATTCAAAG+GGG 0.675316 8_2:+19351205 None:intergenic
AAGTTGCTTGAGGATACCGA+TGG 0.678693 8_2:-19351689 Msa1238700:CDS
TTGGGAATCAGAGTTTGTCG+GGG 0.682626 8_2:-19351768 Msa1238700:CDS
GATTGCACTGACTAAAGTCG+GGG 0.684216 8_2:-19350970 Msa1238700:CDS
AAGGCAAGTGAGTTTGATTG+CGG 0.684765 8_2:-19351429 Msa1238700:CDS
AAGAAACGTCAATAACCTCA+CGG 0.688566 8_2:-19349080 Msa1238700:three_prime_UTR
CATCTTCAGTTGTCTCTATG+CGG 0.688711 8_2:-19350438 Msa1238700:CDS
CAGTGGGAGGAACTTCAAGG+AGG 0.704463 8_2:-19349324 Msa1238700:CDS
CATTTGTCCAAAGACAGCAT+AGG 0.705791 8_2:+19350599 None:intergenic
GGATGGTGATGATAACGGAG+AGG 0.710792 8_2:-19351804 Msa1238700:CDS
TGATAACACTACATTGACAG+AGG 0.716733 8_2:-19349244 Msa1238700:CDS
TGTATCTGTTGATCGAAACG+GGG 0.729772 8_2:-19350673 Msa1238700:CDS
AGACATTCATGCATACACAA+GGG 0.745983 8_2:-19348805 Msa1238700:three_prime_UTR
AAACGTCAATAACCTCACGG+TGG 0.776539 8_2:-19349077 Msa1238700:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTTACTTACTTTAAATA+GGG - chr8_2:19350566-19350585 Msa1238700:CDS 15.0%
!!! TTTTAATGAAAAAAATGACA+GGG + chr8_2:19351524-19351543 None:intergenic 15.0%
!!! ATTTTAATGAAAAAAATGAC+AGG + chr8_2:19351525-19351544 None:intergenic 15.0%
!! ACAAAAATATGAATAATAAC+AGG + chr8_2:19351693-19351712 None:intergenic 15.0%
!!! AAAATCAAAAAAGGATTTTA+GGG + chr8_2:19352242-19352261 None:intergenic 15.0%
!! TTTATCAATAACTCACAAAA+GGG + chr8_2:19349106-19349125 None:intergenic 20.0%
!!! TTTTATCAATAACTCACAAA+AGG + chr8_2:19349107-19349126 None:intergenic 20.0%
!! ATAGAAGATTTACTTGATTA+TGG - chr8_2:19349712-19349731 Msa1238700:intron 20.0%
!! AAATAATTCACACTTTCAAA+GGG - chr8_2:19350364-19350383 Msa1238700:CDS 20.0%
!! CAACTTTACTTACTTTAAAT+AGG - chr8_2:19350565-19350584 Msa1238700:CDS 20.0%
!!! TAAAGTCATTGTTTTCATAT+GGG + chr8_2:19351209-19351228 None:intergenic 20.0%
!!! ATAAAGTCATTGTTTTCATA+TGG + chr8_2:19351210-19351229 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAA+AGG - chr8_2:19351271-19351290 Msa1238700:CDS 20.0%
!!! TTAAGTTGTTTATCCAAAAA+GGG - chr8_2:19351272-19351291 Msa1238700:CDS 20.0%
!! AATTGATACAAGAGAAAATA+AGG + chr8_2:19351307-19351326 None:intergenic 20.0%
!! ACACATAAAATCAATATATG+TGG + chr8_2:19351584-19351603 None:intergenic 20.0%
!!! TATTGATTTTATGTGTGTTT+TGG - chr8_2:19351588-19351607 Msa1238700:CDS 20.0%
!!! ATAAAGTACTAGAAATAGTT+TGG + chr8_2:19351809-19351828 None:intergenic 20.0%
!!! AACTATTTCTAGTACTTTAT+AGG - chr8_2:19351809-19351828 Msa1238700:CDS 20.0%
!!! AAATCAAAAAAGGATTTTAG+GGG + chr8_2:19352241-19352260 None:intergenic 20.0%
!!! CAAAATCAAAAAAGGATTTT+AGG + chr8_2:19352243-19352262 None:intergenic 20.0%
!!! TTGTTTCTTTTCTTTTCATA+AGG - chr8_2:19352368-19352387 Msa1238700:intron 20.0%
! GAACTAATTTGAGAGATAAA+AGG + chr8_2:19348878-19348897 None:intergenic 25.0%
! AATAAAATTCAACTGGGTTT+GGG + chr8_2:19348990-19349009 None:intergenic 25.0%
! GCTAAAATTCAGAAATAATG+AGG + chr8_2:19349019-19349038 None:intergenic 25.0%
! AACTTTCAACATAATTGACA+TGG + chr8_2:19349058-19349077 None:intergenic 25.0%
!!! TTGTTTAATTTTTTGTCTGC+AGG - chr8_2:19349076-19349095 Msa1238700:three_prime_UTR 25.0%
! TTGAGGATAATTGAAAAGTA+TGG - chr8_2:19349183-19349202 Msa1238700:three_prime_UTR 25.0%
!! GATAATTGAAAAGTATGGAA+GGG - chr8_2:19349188-19349207 Msa1238700:three_prime_UTR 25.0%
! GAAGAAGAAAAAGAAAAAGA+AGG - chr8_2:19349639-19349658 Msa1238700:intron 25.0%
! TGAAATGTTTGCAGAAAATA+CGG - chr8_2:19349807-19349826 Msa1238700:CDS 25.0%
!!! TCAAGTTGATTTCTTTTCTA+TGG + chr8_2:19349888-19349907 None:intergenic 25.0%
!!! ACTTCTTTACTTTTCAGAAA+TGG - chr8_2:19350206-19350225 Msa1238700:intron 25.0%
! GAAATAATTCACACTTTCAA+AGG - chr8_2:19350363-19350382 Msa1238700:CDS 25.0%
! TCCAACAATAATGAACAAAT+CGG - chr8_2:19350513-19350532 Msa1238700:CDS 25.0%
! TCAAAGAATATGTTGTAGAT+GGG - chr8_2:19350913-19350932 Msa1238700:CDS 25.0%
! TTAACTAAGTAAAATCACTC+AGG - chr8_2:19351333-19351352 Msa1238700:CDS 25.0%
!! ATTGTCTTTTCCTTTTATAC+AGG - chr8_2:19351365-19351384 Msa1238700:CDS 25.0%
! GTAATATAAGATCAACTTCA+TGG + chr8_2:19351556-19351575 None:intergenic 25.0%
!!! TTTTTAAAGCAGTGGATAAA+AGG - chr8_2:19351765-19351784 Msa1238700:CDS 25.0%
!!! TTTTAAAGCAGTGGATAAAA+GGG - chr8_2:19351766-19351785 Msa1238700:CDS 25.0%
!!! AACATTCACAATTTTTTCTG+TGG + chr8_2:19351848-19351867 None:intergenic 25.0%
!!! CTAAAACATGTTTTTACTGT+TGG + chr8_2:19352211-19352230 None:intergenic 25.0%
! CCTTCAAACAAAATCAAAAA+AGG + chr8_2:19352251-19352270 None:intergenic 25.0%
!!! CCTTTTTTGATTTTGTTTGA+AGG - chr8_2:19352248-19352267 Msa1238700:intron 25.0%
!! GAATACACATTTTTCTATCA+GGG + chr8_2:19352313-19352332 None:intergenic 25.0%
!! AGAATACACATTTTTCTATC+AGG + chr8_2:19352314-19352333 None:intergenic 25.0%
! AAGAAAAGAAACAAAACAGT+TGG + chr8_2:19352362-19352381 None:intergenic 25.0%
AGAGATAACAAGTGCTAAAA+TGG + chr8_2:19348912-19348931 None:intergenic 30.0%
CAATAAAATTCAACTGGGTT+TGG + chr8_2:19348991-19349010 None:intergenic 30.0%
! CAAACCCAGTTGAATTTTAT+TGG - chr8_2:19348989-19349008 Msa1238700:three_prime_UTR 30.0%
CATGCCAATAAAATTCAACT+GGG + chr8_2:19348996-19349015 None:intergenic 30.0%
TCATCAAACTTAAACCTGTT+TGG - chr8_2:19349146-19349165 Msa1238700:three_prime_UTR 30.0%
! GGATAATTGAAAAGTATGGA+AGG - chr8_2:19349187-19349206 Msa1238700:three_prime_UTR 30.0%
! CAAAGGGTTTAAAACAACTT+TGG + chr8_2:19349234-19349253 None:intergenic 30.0%
!!! CAAAGTTGTTTTAAACCCTT+TGG - chr8_2:19349232-19349251 Msa1238700:exon 30.0%
GGGAAATTATAACTAACTCT+TGG + chr8_2:19349265-19349284 None:intergenic 30.0%
TTTGATAGAGATAGTAAAGC+CGG - chr8_2:19349358-19349377 Msa1238700:intron 30.0%
ATTGAAATCGATTAAAGCGA+AGG - chr8_2:19349579-19349598 Msa1238700:intron 30.0%
TTGAAATCGATTAAAGCGAA+GGG - chr8_2:19349580-19349599 Msa1238700:intron 30.0%
GAAAAAGAAAAAGAAGGTTG+AGG - chr8_2:19349645-19349664 Msa1238700:intron 30.0%
TTTACTTGATTATGGTTCAG+AGG - chr8_2:19349720-19349739 Msa1238700:intron 30.0%
!! ACCGATTTGTTCATTATTGT+TGG + chr8_2:19350517-19350536 None:intergenic 30.0%
GAAGTTTCTTCTCTTATGTA+TGG - chr8_2:19350640-19350659 Msa1238700:CDS 30.0%
GTCAAAGAATATGTTGTAGA+TGG - chr8_2:19350912-19350931 Msa1238700:CDS 30.0%
!! GTATTTCTAGAGAAATGTGT+AGG + chr8_2:19350993-19351012 None:intergenic 30.0%
! ACACATTTCTCTAGAAATAC+TGG - chr8_2:19350993-19351012 Msa1238700:CDS 30.0%
! TATTGAATTTAGAGCCTGTT+TGG - chr8_2:19351037-19351056 Msa1238700:CDS 30.0%
CTCAAAAATTCAATCCAAAC+AGG + chr8_2:19351054-19351073 None:intergenic 30.0%
! TACTATTTGAGACAACTCAT+CGG - chr8_2:19351101-19351120 Msa1238700:CDS 30.0%
!!! CTTATTTTTATGAGCTCTTC+AGG - chr8_2:19351159-19351178 Msa1238700:CDS 30.0%
AAAATCAATATATGTGGCAG+TGG + chr8_2:19351578-19351597 None:intergenic 30.0%
TAATAACAGGTGAAAAATCG+AGG + chr8_2:19351680-19351699 None:intergenic 30.0%
AAATAAGCAGCATGCATAAA+CGG + chr8_2:19351748-19351767 None:intergenic 30.0%
!!! ATCATTCAACGTTTTTTGTG+AGG - chr8_2:19351998-19352017 Msa1238700:CDS 30.0%
! AGCCTTGTATATTTGTTAGA+CGG - chr8_2:19352075-19352094 Msa1238700:five_prime_UTR 30.0%
TTCCGTCTAACAAATATACA+AGG + chr8_2:19352080-19352099 None:intergenic 30.0%
GACGTTTCTTAATGATAGTA+TGG + chr8_2:19352122-19352141 None:intergenic 30.0%
GAATATGAAACTCACCAAGA+AGG + chr8_2:19348847-19348866 None:intergenic 35.0%
GCATGCCAATAAAATTCAAC+TGG + chr8_2:19348997-19349016 None:intergenic 35.0%
AGAGTACAAATCAACCAAAC+AGG + chr8_2:19349163-19349182 None:intergenic 35.0%
!! TGGTTGATTTGTACTCTTTG+AGG - chr8_2:19349166-19349185 Msa1238700:three_prime_UTR 35.0%
GGAAGGGTTATTGAATTCTT+TGG - chr8_2:19349204-19349223 Msa1238700:three_prime_UTR 35.0%
! TGCTCTTTTTCCCTTTTCTT+CGG + chr8_2:19349496-19349515 None:intergenic 35.0%
CTTCTCAAATCACTTTCCTT+TGG + chr8_2:19349766-19349785 None:intergenic 35.0%
CAAAGGAAAGTGATTTGAGA+AGG - chr8_2:19349764-19349783 Msa1238700:intron 35.0%
TTGCAGAAAATACGGAGAAA+AGG - chr8_2:19349815-19349834 Msa1238700:CDS 35.0%
AGAAAATACGGAGAAAAGGA+TGG - chr8_2:19349819-19349838 Msa1238700:CDS 35.0%
AATAGACTGTCTCAATTCTC+TGG - chr8_2:19349853-19349872 Msa1238700:intron 35.0%
ATAGACTGTCTCAATTCTCT+GGG - chr8_2:19349854-19349873 Msa1238700:intron 35.0%
TACATACGAAACAATTGTCG+CGG - chr8_2:19349954-19349973 Msa1238700:intron 35.0%
AGCAGTAGCAATATTCAAAG+GGG + chr8_2:19350010-19350029 None:intergenic 35.0%
GAGCAGTAGCAATATTCAAA+GGG + chr8_2:19350011-19350030 None:intergenic 35.0%
AGAGCAGTAGCAATATTCAA+AGG + chr8_2:19350012-19350031 None:intergenic 35.0%
TCATCGCATTGCTAAGAATA+TGG - chr8_2:19350032-19350051 Msa1238700:intron 35.0%
TATGATGAAAACTCGAAGAC+TGG - chr8_2:19350065-19350084 Msa1238700:intron 35.0%
AAAGAGATGTCTATGCTTGT+CGG - chr8_2:19350102-19350121 Msa1238700:intron 35.0%
AAGGAATCTCAAACATAGCT+TGG - chr8_2:19350160-19350179 Msa1238700:intron 35.0%
AGGAATCTCAAACATAGCTT+GGG - chr8_2:19350161-19350180 Msa1238700:intron 35.0%
CAAAACATTGCTAACATTGC+AGG - chr8_2:19350276-19350295 Msa1238700:CDS 35.0%
GTTGTATCTGTTGATCGAAA+CGG - chr8_2:19350537-19350556 Msa1238700:CDS 35.0%
TTGTATCTGTTGATCGAAAC+GGG - chr8_2:19350538-19350557 Msa1238700:CDS 35.0%
ACTTTAAATAGGGATCAGCT+TGG - chr8_2:19350576-19350595 Msa1238700:CDS 35.0%
CTTTAAATAGGGATCAGCTT+GGG - chr8_2:19350577-19350596 Msa1238700:CDS 35.0%
AGATATCATGTTTGCTTCTC+AGG - chr8_2:19350713-19350732 Msa1238700:CDS 35.0%
ATAGAGACAACTGAAGATGT+GGG + chr8_2:19350773-19350792 None:intergenic 35.0%
! TTTTTATGAGCTCTTCAGGA+TGG - chr8_2:19351163-19351182 Msa1238700:CDS 35.0%
! AAGGATACTAAGTCCCTTTT+TGG + chr8_2:19351288-19351307 None:intergenic 35.0%
TAAAGGAACGCCTGTATAAA+AGG + chr8_2:19351378-19351397 None:intergenic 35.0%
! TTTTATACAGGCGTTCCTTT+AGG - chr8_2:19351377-19351396 Msa1238700:CDS 35.0%
TTAAGCATGGTATGTCCTAA+AGG + chr8_2:19351395-19351414 None:intergenic 35.0%
! AATGTATCGACGTTTAAGCA+TGG + chr8_2:19351408-19351427 None:intergenic 35.0%
GCTTAAACGTCGATACATTA+CGG - chr8_2:19351409-19351428 Msa1238700:CDS 35.0%
TGTTTCCAAAGAGTGAAACT+TGG + chr8_2:19351639-19351658 None:intergenic 35.0%
TGCATAAACGGATAAACTGA+TGG + chr8_2:19351736-19351755 None:intergenic 35.0%
!!! GCTGCTTATTTTTAAAGCAG+TGG - chr8_2:19351757-19351776 Msa1238700:CDS 35.0%
!!! GATCTTTTAGAATGTCCCTT+AGG + chr8_2:19351932-19351951 None:intergenic 35.0%
TGATAACACTACATTGACAG+AGG - chr8_2:19351968-19351987 Msa1238700:CDS 35.0%
!!! CAACGTTTTTTGTGAGGTAT+CGG - chr8_2:19352004-19352023 Msa1238700:CDS 35.0%
!!! AACGTTTTTTGTGAGGTATC+GGG - chr8_2:19352005-19352024 Msa1238700:CDS 35.0%
AAGAAACGTCAATAACCTCA+CGG - chr8_2:19352132-19352151 Msa1238700:intron 35.0%
AGACATTCATGCATACACAA+GGG - chr8_2:19352407-19352426 Msa1238700:five_prime_UTR 35.0%
ACTCTTGGAGTGAAACCAAA+GGG + chr8_2:19349250-19349269 None:intergenic 40.0%
AACTCTTGGAGTGAAACCAA+AGG + chr8_2:19349251-19349270 None:intergenic 40.0%
ATTTAAACGCCAAGTTCTCG+TGG + chr8_2:19349293-19349312 None:intergenic 40.0%
! GCATTGGATGGTGATGATAA+CGG - chr8_2:19349403-19349422 Msa1238700:intron 40.0%
AGAGGAGTCTGATATGGATT+GGG - chr8_2:19349426-19349445 Msa1238700:intron 40.0%
GATTGGGAATCAGAGTTTGT+CGG - chr8_2:19349442-19349461 Msa1238700:intron 40.0%
ATTGGGAATCAGAGTTTGTC+GGG - chr8_2:19349443-19349462 Msa1238700:intron 40.0%
AATCGATTAAAGCGAAGGGT+AGG - chr8_2:19349584-19349603 Msa1238700:intron 40.0%
ATCGATTAAAGCGAAGGGTA+GGG - chr8_2:19349585-19349604 Msa1238700:intron 40.0%
GGCTTATGCAATGGAAGATT+TGG - chr8_2:19349606-19349625 Msa1238700:intron 40.0%
GAAAAAGAAGGTTGAGGAGA+AGG - chr8_2:19349651-19349670 Msa1238700:intron 40.0%
TATGGTTCAGAGGAAGAGTT+TGG - chr8_2:19349730-19349749 Msa1238700:intron 40.0%
AAATCACTTTCCTTTGGCTG+TGG + chr8_2:19349760-19349779 None:intergenic 40.0%
AAGGCAAGTGAGTTTGATTG+CGG - chr8_2:19349783-19349802 Msa1238700:CDS 40.0%
!! GAGATTGCACTGACTAAAGT+CGG - chr8_2:19350240-19350259 Msa1238700:CDS 40.0%
!! AGATTGCACTGACTAAAGTC+GGG - chr8_2:19350241-19350260 Msa1238700:CDS 40.0%
! TTTTCGCTGAACTGTCGAAA+AGG - chr8_2:19350334-19350353 Msa1238700:CDS 40.0%
TTTCGCTGAACTGTCGAAAA+GGG - chr8_2:19350335-19350354 Msa1238700:CDS 40.0%
! AAGAACTTGCACAGCTTTTG+TGG - chr8_2:19350388-19350407 Msa1238700:CDS 40.0%
! AGAACTTGCACAGCTTTTGT+GGG - chr8_2:19350389-19350408 Msa1238700:CDS 40.0%
GAATCAAATACAGTGTCAGC+AGG + chr8_2:19350435-19350454 None:intergenic 40.0%
GAAGATCATTGCCAATCGAA+AGG - chr8_2:19350471-19350490 Msa1238700:CDS 40.0%
TGTATCTGTTGATCGAAACG+GGG - chr8_2:19350539-19350558 Msa1238700:CDS 40.0%
CATTTGTCCAAAGACAGCAT+AGG + chr8_2:19350616-19350635 None:intergenic 40.0%
CTATGCTGTCTTTGGACAAA+TGG - chr8_2:19350614-19350633 Msa1238700:CDS 40.0%
!! GAAAACTCTCAGCCATTTTG+AGG - chr8_2:19350662-19350681 Msa1238700:CDS 40.0%
AAACCCTTTGCTCCTCAAAA+TGG + chr8_2:19350677-19350696 None:intergenic 40.0%
AAAGGGTTTCAGAGCTGTAT+CGG - chr8_2:19350688-19350707 Msa1238700:CDS 40.0%
!! TCAAGCACTGGTTTACAAGA+TGG + chr8_2:19350740-19350759 None:intergenic 40.0%
! GGAATTCAAGTTTCAAGCAC+TGG + chr8_2:19350752-19350771 None:intergenic 40.0%
CATAGAGACAACTGAAGATG+TGG + chr8_2:19350774-19350793 None:intergenic 40.0%
CATCTTCAGTTGTCTCTATG+CGG - chr8_2:19350774-19350793 Msa1238700:CDS 40.0%
AACTTCGTCGTTTCAGAAAG+AGG - chr8_2:19350854-19350873 Msa1238700:CDS 40.0%
! TTGTTAGCACTGGACTTGAA+TGG - chr8_2:19350889-19350908 Msa1238700:CDS 40.0%
! TGTTAGCACTGGACTTGAAT+GGG - chr8_2:19350890-19350909 Msa1238700:CDS 40.0%
TGTTGTAGATGGGTACACTT+TGG - chr8_2:19350923-19350942 Msa1238700:CDS 40.0%
! AGTCGATAAGAAGCTTGCTT+TGG - chr8_2:19350956-19350975 Msa1238700:CDS 40.0%
GTCTTCCAAGTTTCACTCTT+TGG - chr8_2:19351631-19351650 Msa1238700:CDS 40.0%
! CACTTTTACTTTCCTGCAGT+GGG - chr8_2:19351872-19351891 Msa1238700:CDS 40.0%
!!! ACGTTTTTTGTGAGGTATCG+GGG - chr8_2:19352006-19352025 Msa1238700:CDS 40.0%
GTGTATGCATGAATGTCTGA+TGG + chr8_2:19352405-19352424 None:intergenic 40.0%
CAGACATTCATGCATACACA+AGG - chr8_2:19352406-19352425 Msa1238700:five_prime_UTR 40.0%
ACCAAGAAGGAGAGAAGAGA+CGG + chr8_2:19348834-19348853 None:intergenic 45.0%
CAATCTATCTCCTCTAGCAC+CGG + chr8_2:19349380-19349399 None:intergenic 45.0%
! AGGAGATAGATTGGCTGCAT+TGG - chr8_2:19349387-19349406 Msa1238700:intron 45.0%
! GATAGATTGGCTGCATTGGA+TGG - chr8_2:19349391-19349410 Msa1238700:intron 45.0%
TAACGGAGAGGAGTCTGATA+TGG - chr8_2:19349420-19349439 Msa1238700:intron 45.0%
GAGAGGAGTCTGATATGGAT+TGG - chr8_2:19349425-19349444 Msa1238700:intron 45.0%
TTGGGAATCAGAGTTTGTCG+GGG - chr8_2:19349444-19349463 Msa1238700:intron 45.0%
ATCAGAGTTTGTCGGGGAAT+TGG - chr8_2:19349450-19349469 Msa1238700:intron 45.0%
TTACCGAGCTCCGAAGAAAA+GGG - chr8_2:19349483-19349502 Msa1238700:intron 45.0%
! TTTCCCTTTTCTTCGGAGCT+CGG + chr8_2:19349489-19349508 None:intergenic 45.0%
GCAAAAGTCGAAGTTGCTTG+AGG - chr8_2:19349513-19349532 Msa1238700:intron 45.0%
AAGTTGCTTGAGGATACCGA+TGG - chr8_2:19349523-19349542 Msa1238700:intron 45.0%
AGGATACCGATGGAATGGAT+TGG - chr8_2:19349533-19349552 Msa1238700:intron 45.0%
CACACACCAATCCATTCCAT+CGG + chr8_2:19349542-19349561 None:intergenic 45.0%
!! ATGGAATGGATTGGTGTGTG+AGG - chr8_2:19349542-19349561 Msa1238700:intron 45.0%
!! TGGAATGGATTGGTGTGTGA+GGG - chr8_2:19349543-19349562 Msa1238700:intron 45.0%
AAAGAAGGTTGAGGAGAAGG+TGG - chr8_2:19349654-19349673 Msa1238700:intron 45.0%
ACAATTGTCGCGGTTGCAAA+AGG - chr8_2:19349964-19349983 Msa1238700:intron 45.0%
GCAATATTCAAAGGGGAGAG+AGG + chr8_2:19350003-19350022 None:intergenic 45.0%
ATTCCTTGAGCTGAGCATTC+AGG + chr8_2:19350147-19350166 None:intergenic 45.0%
AAGAAGTTCGCCTCCAACTT+TGG + chr8_2:19350193-19350212 None:intergenic 45.0%
!! GATTGCACTGACTAAAGTCG+GGG - chr8_2:19350242-19350261 Msa1238700:CDS 45.0%
GACAGTTCAGCGAAAAGATC+GGG + chr8_2:19350330-19350349 None:intergenic 45.0%
CGACAGTTCAGCGAAAAGAT+CGG + chr8_2:19350331-19350350 None:intergenic 45.0%
TGCCAATCGAAAGGTTTCGT+AGG - chr8_2:19350480-19350499 Msa1238700:CDS 45.0%
CACCTACGAAACCTTTCGAT+TGG + chr8_2:19350485-19350504 None:intergenic 45.0%
ATCAGCTTGGGACTATAGCT+TGG - chr8_2:19350589-19350608 Msa1238700:CDS 45.0%
!! TCAGCCATTTTGAGGAGCAA+AGG - chr8_2:19350670-19350689 Msa1238700:CDS 45.0%
!! CAGCCATTTTGAGGAGCAAA+GGG - chr8_2:19350671-19350690 Msa1238700:CDS 45.0%
AAGGGTTTCAGAGCTGTATC+GGG - chr8_2:19350689-19350708 Msa1238700:CDS 45.0%
TCGTCGTTTCAGAAAGAGGT+TGG - chr8_2:19350858-19350877 Msa1238700:CDS 45.0%
GGTCATCTTCTTGTTAGCAC+TGG - chr8_2:19350879-19350898 Msa1238700:CDS 45.0%
!! AAGCTTGCTTTGGAGATCGA+TGG - chr8_2:19350966-19350985 Msa1238700:CDS 45.0%
CAACGATACGAGTTTCCAAC+CGG + chr8_2:19351438-19351457 None:intergenic 45.0%
CGTATCGTTGTCCTATCAAG+AGG - chr8_2:19351448-19351467 Msa1238700:CDS 45.0%
TTGAGAGCTGACCTCTTGAT+AGG + chr8_2:19351462-19351481 None:intergenic 45.0%
! GCACTTTTACTTTCCTGCAG+TGG - chr8_2:19351871-19351890 Msa1238700:CDS 45.0%
! TTTTACTTTCCTGCAGTGGG+AGG - chr8_2:19351875-19351894 Msa1238700:CDS 45.0%
! TGAACAGGTGGAGTACCTAA+GGG - chr8_2:19351914-19351933 Msa1238700:CDS 45.0%
!!! CGTTTTTTGTGAGGTATCGG+GGG - chr8_2:19352007-19352026 Msa1238700:CDS 45.0%
AAACGTCAATAACCTCACGG+TGG - chr8_2:19352135-19352154 Msa1238700:intron 45.0%
! AGTTTGTCGACTAGCTCAGA+TGG + chr8_2:19352162-19352181 None:intergenic 45.0%
!! TGCTTGAGTCGTTTTACGCT+TGG - chr8_2:19352282-19352301 Msa1238700:intron 45.0%
!! GCTTGAGTCGTTTTACGCTT+GGG - chr8_2:19352283-19352302 Msa1238700:intron 45.0%
ACACAGTCTGCTTTGTCCTG+AGG - chr8_2:19348806-19348825 Msa1238700:three_prime_UTR 50.0%
TCCCAGTTACCACGAGAACT+TGG - chr8_2:19349281-19349300 Msa1238700:CDS 50.0%
GCCAAGTTCTCGTGGTAACT+GGG + chr8_2:19349285-19349304 None:intergenic 50.0%
! GATAGTAAAGCCGGTGCTAG+AGG - chr8_2:19349367-19349386 Msa1238700:intron 50.0%
! CGGTGCTAGAGGAGATAGAT+TGG - chr8_2:19349378-19349397 Msa1238700:intron 50.0%
!! GGATGGTGATGATAACGGAG+AGG - chr8_2:19349408-19349427 Msa1238700:intron 50.0%
TTCGGAGCTCGGTAACCAAA+CGG + chr8_2:19349478-19349497 None:intergenic 50.0%
GTTACCGAGCTCCGAAGAAA+AGG - chr8_2:19349482-19349501 Msa1238700:intron 50.0%
GCTTGAGGATACCGATGGAA+TGG - chr8_2:19349528-19349547 Msa1238700:intron 50.0%
GAAGGGTAGGGCTTATGCAA+TGG - chr8_2:19349597-19349616 Msa1238700:intron 50.0%
GCAGACTGCAGATGATGTGT+TGG - chr8_2:19349927-19349946 Msa1238700:intron 50.0%
TTCAAAGGGGAGAGAGGTGA+GGG + chr8_2:19349997-19350016 None:intergenic 50.0%
ATTCAAAGGGGAGAGAGGTG+AGG + chr8_2:19349998-19350017 None:intergenic 50.0%
TTGAGCTGAGCATTCAGGCA+AGG + chr8_2:19350142-19350161 None:intergenic 50.0%
TTGCCTGAATGCTCAGCTCA+AGG - chr8_2:19350141-19350160 Msa1238700:intron 50.0%
GCTTGGTCCTATGCTGTCTT+TGG - chr8_2:19350606-19350625 Msa1238700:CDS 50.0%
GAGGATAAAGTTTCCAGCGC+TGG - chr8_2:19350804-19350823 Msa1238700:CDS 50.0%
!! CCTTTTCGTTTTTCCAGCGC+TGG + chr8_2:19350820-19350839 None:intergenic 50.0%
! CCAGCGCTGGAAAAACGAAA+AGG - chr8_2:19350817-19350836 Msa1238700:CDS 50.0%
AGTGGGAGGAACTTCAAGGA+GGG - chr8_2:19351889-19351908 Msa1238700:CDS 50.0%
ACTTCAAGGAGGGTCTGAAC+AGG - chr8_2:19351899-19351918 Msa1238700:CDS 50.0%
! CTGAACAGGTGGAGTACCTA+AGG - chr8_2:19351913-19351932 Msa1238700:CDS 50.0%
!! GAGTCGTTTTACGCTTGGGT+CGG - chr8_2:19352287-19352306 Msa1238700:intron 50.0%
GCCGTCTCTTCTCTCCTTCT+TGG - chr8_2:19348830-19348849 Msa1238700:three_prime_UTR 55.0%
CGCCAAGTTCTCGTGGTAAC+TGG + chr8_2:19349286-19349305 None:intergenic 55.0%
GTCGGGGAATTGGATCCGTT+TGG - chr8_2:19349460-19349479 Msa1238700:intron 55.0%
GTTTGGACTGCCACAGCCAA+AGG - chr8_2:19349747-19349766 Msa1238700:intron 55.0%
GTCTCTATGCGGTGAGCTTG+AGG - chr8_2:19350785-19350804 Msa1238700:CDS 55.0%
CGTCGATACATTACGGCTGC+CGG - chr8_2:19351416-19351435 Msa1238700:CDS 55.0%
GATACATTACGGCTGCCGGT+TGG - chr8_2:19351420-19351439 Msa1238700:CDS 55.0%
CTTGAAGTTCCTCCCACTGC+AGG + chr8_2:19351887-19351906 None:intergenic 55.0%
CTGCAGTGGGAGGAACTTCA+AGG - chr8_2:19351885-19351904 Msa1238700:CDS 55.0%
CAGTGGGAGGAACTTCAAGG+AGG - chr8_2:19351888-19351907 Msa1238700:CDS 55.0%
TCAAGGAGGGTCTGAACAGG+TGG - chr8_2:19351902-19351921 Msa1238700:CDS 55.0%
GAGAGAAGAGACGGCTCCTC+AGG + chr8_2:19348825-19348844 None:intergenic 60.0%
TTGGTGTGTGAGGGCGAGAG+AGG - chr8_2:19349552-19349571 Msa1238700:intron 60.0%
! GCTTGGGCGCTGTCCAAAGT+TGG - chr8_2:19350177-19350196 Msa1238700:intron 60.0%
! TGGGCGCTGTCCAAAGTTGG+AGG - chr8_2:19350180-19350199 Msa1238700:intron 60.0%
AGCTCAGATGGTCCACCGTG+AGG + chr8_2:19352150-19352169 None:intergenic 60.0%
GTGTGTGAGGGCGAGAGAGG+TGG - chr8_2:19349555-19349574 Msa1238700:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 19348778 19352456 19348778 ID=Msa1238700;Name=Msa1238700
chr8_2 mRNA 19348778 19352456 19348778 ID=Msa1238700-mRNA-1;Parent=Msa1238700;Name=Msa1238700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=178|1|1|1|0.66|0.5|4|458|667
chr8_2 exon 19348778 19349343 19348778 ID=Msa1238700-mRNA-1:exon:7165;Parent=Msa1238700-mRNA-1
chr8_2 exon 19349765 19349847 19349765 ID=Msa1238700-mRNA-1:exon:7164;Parent=Msa1238700-mRNA-1
chr8_2 exon 19350220 19352136 19350220 ID=Msa1238700-mRNA-1:exon:7163;Parent=Msa1238700-mRNA-1
chr8_2 exon 19352383 19352456 19352383 ID=Msa1238700-mRNA-1:exon:7162;Parent=Msa1238700-mRNA-1
chr8_2 five_prime_UTR 19352383 19352456 19352383 ID=Msa1238700-mRNA-1:five_prime_utr;Parent=Msa1238700-mRNA-1
chr8_2 five_prime_UTR 19352033 19352136 19352033 ID=Msa1238700-mRNA-1:five_prime_utr;Parent=Msa1238700-mRNA-1
chr8_2 CDS 19350220 19352032 19350220 ID=Msa1238700-mRNA-1:cds;Parent=Msa1238700-mRNA-1
chr8_2 CDS 19349765 19349847 19349765 ID=Msa1238700-mRNA-1:cds;Parent=Msa1238700-mRNA-1
chr8_2 CDS 19349236 19349343 19349236 ID=Msa1238700-mRNA-1:cds;Parent=Msa1238700-mRNA-1
chr8_2 three_prime_UTR 19348778 19349235 19348778 ID=Msa1238700-mRNA-1:three_prime_utr;Parent=Msa1238700-mRNA-1
Gene Sequence

>Msa1238700

ATGGAAGGGTTATTGAATTCTTTGGTTAACCAAAGTTGTTTTAAACCCTTTGGTTTCACTCCAAGAGTTAGTTATAATTTCCCAGTTACCACGAGAACTTGGCGTTTAAATCGAAAACTTGATTCATATAATACATTGAGAATCGATTGCACGCGTTTTGATAGAGATAGTAAAGCCGGTGCTAGAGGAGATAGATTGGCTGCATTGGATGGTGATGATAACGGAGAGGAGTCTGATATGGATTGGGAATCAGAGTTTGTCGGGGAATTGGATCCGTTTGGTTACCGAGCTCCGAAGAAAAGGGAAAAAGAGCAAAAGTCGAAGTTGCTTGAGGATACCGATGGAATGGATTGGTGTGTGAGGGCGAGAGAGGTGGCATTGAAATCGATTAAAGCGAAGGGTAGGGCTTATGCAATGGAAGATTTGGTAACTGTTAAGAAGAAGAAAAAGAAAAAGAAGGTTGAGGAGAAGGTGGTAAGCAAGAAGAAAACTGAGAAGAAAATAGATGAAATAGAAGATTTACTTGATTATGGTTCAGAGGAAGAGTTTGGACTGCCACAGCCAAAGGAAAGTGATTTGAGAAGGCAAGTGAGTTTGATTGCGGATGAAATGTTTGCAGAAAATACGGAGAAAAGGATGGAAACGTTTTACAATAGACTGTCTCAATTCTCTGGGATATCTGACCATAGAAAAGAAATCAACTTGAACAAAGCGATTATTGAATCGCAGACTGCAGATGATGTGTTGGATGTTACATACGAAACAATTGTCGCGGTTGCAAAAGGATTGAGTCCCTCACCTCTCTCCCCTTTGAATATTGCTACTGCTCTTCATCGCATTGCTAAGAATATGGAGAAAGTTTCTATGATGAAAACTCGAAGACTGGCTTTTGCTCGACAAAAAGAGATGTCTATGCTTGTCGGCGTTGCAATGACAGCCTTGCCTGAATGCTCAGCTCAAGGAATCTCAAACATAGCTTGGGCGCTGTCCAAAGTTGGAGGCGAACTTCTTTACTTTTCAGAAATGGATAGAATTGCAGAGATTGCACTGACTAAAGTCGGGGAATTAAACTCTCAAAACATTGCTAACATTGCAGGTTCTTTCGCTTCAATGCAACATTCAGCTCCCGATCTTTTCGCTGAACTGTCGAAAAGGGCTTCAGAAATAATTCACACTTTCAAAGGGCAAGAACTTGCACAGCTTTTGTGGGCTTTCGCATCTCTATATGAGCCTGCTGACACTGTATTTGATTCTTTAGACAGACTCTTCGAAGATCATTGCCAATCGAAAGGTTTCGTAGGTGAAAAAACATCCAACAATAATGAACAAATCGGTGTTGTATCTGTTGATCGAAACGGGGACTCAACTTTACTTACTTTAAATAGGGATCAGCTTGGGACTATAGCTTGGTCCTATGCTGTCTTTGGACAAATGGACAGAAGTTTCTTCTCTTATGTATGGAAAACTCTCAGCCATTTTGAGGAGCAAAGGGTTTCAGAGCTGTATCGGGAAGATATCATGTTTGCTTCTCAGGTCCATCTTGTAAACCAGTGCTTGAAACTTGAATTCCCACATCTTCAGTTGTCTCTATGCGGTGAGCTTGAGGATAAAGTTTCCAGCGCTGGAAAAACGAAAAGGTTTAATCAGAAGATAACTTCGTCGTTTCAGAAAGAGGTTGGTCATCTTCTTGTTAGCACTGGACTTGAATGGGTCAAAGAATATGTTGTAGATGGGTACACTTTGGATGCTGTGATAGTCGATAAGAAGCTTGCTTTGGAGATCGATGGTCCTACACATTTCTCTAGAAATACTGGCGTTCCTTTAGGACATACCATGCTTAAACGTCGATACATTACGGCTGCCGGTTGGAAACTCGTATCGTTGTCCTATCAAGAGTGGGAGGAACTTCAAGGAGGGTCTGAACAGGTGGAGTACCTAAGGGACATTCTAAAAGATCATTTAGATAAAAAATATGATAACACTACATTGACAGAGGTAAAGTGA

Protein sequence

>Msa1238700

MEGLLNSLVNQSCFKPFGFTPRVSYNFPVTTRTWRLNRKLDSYNTLRIDCTRFDRDSKAGARGDRLAALDGDDNGEESDMDWESEFVGELDPFGYRAPKKREKEQKSKLLEDTDGMDWCVRAREVALKSIKAKGRAYAMEDLVTVKKKKKKKKVEEKVVSKKKTEKKIDEIEDLLDYGSEEEFGLPQPKESDLRRQVSLIADEMFAENTEKRMETFYNRLSQFSGISDHRKEINLNKAIIESQTADDVLDVTYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVSMMKTRRLAFARQKEMSMLVGVAMTALPECSAQGISNIAWALSKVGGELLYFSEMDRIAEIALTKVGELNSQNIANIAGSFASMQHSAPDLFAELSKRASEIIHTFKGQELAQLLWAFASLYEPADTVFDSLDRLFEDHCQSKGFVGEKTSNNNEQIGVVSVDRNGDSTLLTLNRDQLGTIAWSYAVFGQMDRSFFSYVWKTLSHFEEQRVSELYREDIMFASQVHLVNQCLKLEFPHLQLSLCGELEDKVSSAGKTKRFNQKITSSFQKEVGHLLVSTGLEWVKEYVVDGYTLDAVIVDKKLALEIDGPTHFSRNTGVPLGHTMLKRRYITAAGWKLVSLSYQEWEELQGGSEQVEYLRDILKDHLDKKYDNTTLTEVK*