AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173760 MtrunA17_Chr1g0193971 99.678 622 2 0 1 622 411 1032 0.0 1279
Msa0173760 MtrunA17_Chr3g0125191 37.195 656 321 16 2 575 383 1029 9.13e-108 348
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173760 AT4G01800.3 83.866 626 93 4 1 622 402 1023 0.0 1073
Msa0173760 AT4G01800.1 83.866 626 93 4 1 622 401 1022 0.0 1073
Msa0173760 AT4G01800.2 79.305 662 93 5 1 622 385 1042 0.0 1055
Msa0173760 AT1G21650.1 41.772 474 247 6 2 453 396 862 1.60e-101 332
Msa0173760 AT1G21650.2 41.772 474 247 6 2 453 396 862 2.49e-101 332
Msa0173760 AT1G21650.2 38.356 73 45 0 506 578 973 1045 9.49e-11 65.5
Msa0173760 AT1G21650.3 42.737 475 241 7 2 453 1143 1609 1.09e-98 331
Msa0173760 AT1G21650.3 38.356 73 45 0 506 578 1720 1792 9.46e-11 65.9

Find 147 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCGGTAATGCTGAATTTA+TGG 0.191615 1_4:-59120697 Msa0173760:CDS
AATAGTTCTCCACTTTCTTT+TGG 0.199480 1_4:+59117369 None:intergenic
CCTTTGCTTCAACTGCTTGA+TGG 0.218717 1_4:+59121814 None:intergenic
TGCGCTGAGAAATGCATTTC+TGG 0.231487 1_4:-59118023 Msa0173760:CDS
CACTCATTCCTCAGCAAATC+AGG 0.259875 1_4:+59116487 None:intergenic
CCAGTGTCACAGTTTCATTT+TGG 0.279563 1_4:+59121778 None:intergenic
CAACCTGCAGAAAGAAATTC+TGG 0.280198 1_4:+59121742 None:intergenic
TCAAGATCCCAGCTGTCTTT+TGG 0.292370 1_4:+59117089 None:intergenic
TGTTATATATTCCATATATC+AGG 0.296153 1_4:-59115799 Msa0173760:intron
CTTATCATAGGTTTGTTTGT+AGG 0.317559 1_4:+59121536 None:intergenic
CCAGTCATGCCACATAGTTT+TGG 0.318412 1_4:+59121620 None:intergenic
CTGTATAAACCCGGTCTCTT+TGG 0.325491 1_4:+59117297 None:intergenic
ATCAGTGCAAACCTGATATA+TGG 0.330978 1_4:+59115788 None:intergenic
TTGGGCTTCATCTAATGCTT+TGG 0.351487 1_4:+59117388 None:intergenic
TAGCACAGAGTGGTCGTCTT+GGG 0.356860 1_4:-59120770 Msa0173760:CDS
TAAGAGACCTTTCTTATCAT+AGG 0.359157 1_4:+59121524 None:intergenic
CGTTCCACGGCCAGCCATAT+TGG 0.381358 1_4:+59120731 None:intergenic
ATCTCTAGAATGCACAAAAC+TGG 0.382093 1_4:-59121137 Msa0173760:CDS
ATTTGGTGGAGACCGAATTC+AGG 0.387024 1_4:-59117547 Msa0173760:intron
CTAATGCTTTGGTCAACATC+TGG 0.390055 1_4:+59117399 None:intergenic
GAATGAGTGTCCGGATTATG+AGG 0.403995 1_4:-59116473 Msa0173760:CDS
CATGAACTAGCACTTGTTGA+TGG 0.404611 1_4:+59115535 None:intergenic
GCAATGACTTCATCTTGGGC+TGG 0.408618 1_4:+59118046 None:intergenic
CAATGACTTCATCTTGGGCT+GGG 0.420139 1_4:+59118047 None:intergenic
CGCAGCAATGACTTCATCTT+GGG 0.421435 1_4:+59118042 None:intergenic
TCAAGTTTATATTCGATAAG+TGG 0.422571 1_4:+59115867 None:intergenic
GGCTGAGGAGGCCGTGCAAT+TGG 0.423890 1_4:-59118260 Msa0173760:CDS
TTACCAGAATTTCTTTCTGC+AGG 0.426833 1_4:-59121745 Msa0173760:intron
CATACCTTCCATGTCTTACT+AGG 0.427722 1_4:+59119145 None:intergenic
TTCTTTGTCTGAGCAATTGA+AGG 0.438055 1_4:-59121072 Msa0173760:CDS
TTTACGAGGGTATGCGCAAC+GGG 0.442299 1_4:-59115892 Msa0173760:CDS
CCAAAACTATGTGGCATGAC+TGG 0.442944 1_4:-59121620 Msa0173760:CDS
CTGATGCTCCAAAAGACAGC+TGG 0.443951 1_4:-59117097 Msa0173760:CDS
GCGCAGCAATGACTTCATCT+TGG 0.444975 1_4:+59118041 None:intergenic
ATAACCACATTACCTGAATT+CGG 0.447020 1_4:+59117535 None:intergenic
TGACTGCAGGTCGTGGCGGC+TGG 0.447193 1_4:-59117885 Msa0173760:intron
AGAACTATTTCTTTGACATT+CGG 0.452777 1_4:-59117355 Msa0173760:CDS
AGTGGCAGACAAGGAGATCC+AGG 0.457591 1_4:-59117615 Msa0173760:CDS
ATCACGGCGAATTGACAATC+AGG 0.460990 1_4:-59117829 Msa0173760:intron
ACTGAAGATTGTCAGATTGA+AGG 0.462329 1_4:+59117261 None:intergenic
AGAATCAGAAATCAGGTAAA+CGG 0.464344 1_4:-59115609 Msa0173760:CDS
GTGCCATCATCTCCAAGAAA+AGG 0.464454 1_4:+59115835 None:intergenic
CTCCGCAATCCCTCATAATC+CGG 0.465751 1_4:+59116463 None:intergenic
CTGCAGGTCGTGGCGGCTGG+TGG 0.466272 1_4:-59117882 Msa0173760:intron
CTGAAGATTGTCAGATTGAA+GGG 0.466721 1_4:+59117262 None:intergenic
GTCAACATCTGGGACTCAAT+AGG 0.468227 1_4:+59117410 None:intergenic
GATCGATATTGCTCAAGATC+AGG 0.469391 1_4:+59115967 None:intergenic
TCTGAGCAATTGAAGGAAGC+TGG 0.469463 1_4:-59121065 Msa0173760:CDS
TCAACTGTACCAACTGGATC+TGG 0.472847 1_4:+59115559 None:intergenic
CCAAAATGAAACTGTGACAC+TGG 0.475117 1_4:-59121778 Msa0173760:CDS
AATGCTGCCATAGGATATTA+CGG 0.480880 1_4:-59116030 Msa0173760:intron
TTCCATGTCTTACTAGGAGG+AGG 0.482988 1_4:+59119151 None:intergenic
CTCTCTACTGATAGGGGAGA+AGG 0.483742 1_4:-59121851 None:intergenic
TACTTAATAGCCAAAGAGAC+CGG 0.484335 1_4:-59117307 Msa0173760:CDS
AAAGCTGAGAATCAGAAATC+AGG 0.488346 1_4:-59115616 Msa0173760:CDS
ACTGGCCGACCTGTGCTTGT+TGG 0.488529 1_4:-59121119 Msa0173760:CDS
CTGATCTTGCTTTAGCAGCA+CGG 0.495118 1_4:+59115642 None:intergenic
AAAGAGATCATTAACTGAGC+TGG 0.496811 1_4:-59118221 Msa0173760:CDS
TCAGGGCTACTAGAGGGAAA+TGG 0.499495 1_4:-59121178 Msa0173760:CDS
TGTGACAATTGCCACCAATA+TGG 0.500341 1_4:-59120745 Msa0173760:CDS
GATGGCTCAACTGTACCAAC+TGG 0.506122 1_4:+59115553 None:intergenic
CAAAACCAGAAAATGTTGAG+AGG 0.507992 1_4:-59120806 Msa0173760:CDS
CCTATCATATTCCTGTGAAA+AGG 0.508717 1_4:-59118185 Msa0173760:intron
CGTGCTGCTAAAGCAAGATC+AGG 0.510983 1_4:-59115641 Msa0173760:CDS
TGCAATTGGCTGTTAAAGCA+TGG 0.511036 1_4:-59118246 Msa0173760:CDS
CGGAGCTATCTTCGTCTTCG+CGG 0.512696 1_4:-59116445 Msa0173760:CDS
CGTGGAACGGATATAATCCT+TGG 0.517507 1_4:-59120717 Msa0173760:CDS
GCCACCAATATGGCTGGCCG+TGG 0.521908 1_4:-59120735 Msa0173760:CDS
AAACAAACCTATGATAAGAA+AGG 0.525720 1_4:-59121531 Msa0173760:intron
TGTACCAACTGGATCTGGAT+TGG 0.528329 1_4:+59115564 None:intergenic
TGATCTTGCTTTAGCAGCAC+GGG 0.529438 1_4:+59115643 None:intergenic
CTTATCGAATATAAACTTGA+GGG 0.529538 1_4:-59115864 Msa0173760:CDS
GCAATTGGCTGTTAAAGCAT+GGG 0.529745 1_4:-59118245 Msa0173760:CDS
TATTACGGAGCAACAAGCAC+CGG 0.530458 1_4:-59116015 Msa0173760:CDS
GTAGCACAGAGTGGTCGTCT+TGG 0.531698 1_4:-59120771 Msa0173760:CDS
CGTGGTCGAAGTGGCAGACA+AGG 0.531786 1_4:-59117624 Msa0173760:CDS
TAATGCTTTGGTCAACATCT+GGG 0.533233 1_4:+59117400 None:intergenic
TAGGGGAGAAGGTGGAGTGA+TGG 0.538677 1_4:-59121840 Msa0173760:CDS
CAGCAAGCTGTGGGTTTACG+AGG 0.541615 1_4:-59115906 Msa0173760:CDS
TGCTTTAACAGCCAATTGCA+CGG 0.542802 1_4:+59118249 None:intergenic
AGATGAAGCCCAAAAGAAAG+TGG 0.543767 1_4:-59117378 Msa0173760:CDS
CAAGGAATATAAAATCTTCA+CGG 0.545736 1_4:-59117993 Msa0173760:CDS
TGGAGCATCAGAACCAATGT+TGG 0.548939 1_4:+59117109 None:intergenic
TCCGCTTCTTTCATCAAACC+CGG 0.551792 1_4:+59115996 None:intergenic
AAAATTTGTTCAGCAAGCTG+TGG 0.553226 1_4:-59115916 Msa0173760:CDS
AAATTTGTTCAGCAAGCTGT+GGG 0.556792 1_4:-59115915 Msa0173760:CDS
TAAATTCAGCATTACCGCCA+AGG 0.558074 1_4:+59120700 None:intergenic
TGAGCAATATCGATCGGCTG+TGG 0.560277 1_4:-59115959 Msa0173760:CDS
CAAGCAGTTGAAGCAAAGGA+AGG 0.561149 1_4:-59121810 Msa0173760:CDS
TCCACGGCCAGCCATATTGG+TGG 0.561781 1_4:+59120734 None:intergenic
AAATACTGAGTTGGCTGAGG+AGG 0.564553 1_4:-59118272 Msa0173760:CDS
TTTGCTGAGGAATGAGTGTC+CGG 0.565166 1_4:-59116482 Msa0173760:CDS
ACTCATTCCTCAGCAAATCA+GGG 0.567956 1_4:+59116488 None:intergenic
GTGATGAATTAGGCCAACAT+TGG 0.568989 1_4:-59117122 Msa0173760:intron
CAATATGGCTGGCCGTGGAA+CGG 0.569076 1_4:-59120730 Msa0173760:CDS
TGATGCTCCAAAAGACAGCT+GGG 0.570676 1_4:-59117096 Msa0173760:CDS
ACTTAATAGCCAAAGAGACC+GGG 0.571023 1_4:-59117306 Msa0173760:CDS
TTACAGTTCCCAAAACTATG+TGG 0.574085 1_4:-59121629 Msa0173760:intron
AGCACAGAGTGGTCGTCTTG+GGG 0.575061 1_4:-59120769 Msa0173760:CDS
CCATCAAGCAGTTGAAGCAA+AGG 0.575427 1_4:-59121814 Msa0173760:CDS
ATTACGGAGCAACAAGCACC+GGG 0.579479 1_4:-59116014 Msa0173760:CDS
ACTTATCGAATATAAACTTG+AGG 0.581592 1_4:-59115865 Msa0173760:CDS
ATGGAGACTTTACCTCATGC+GGG 0.583215 1_4:+59121039 None:intergenic
CTAGTCGTGCCAACAAGCAC+AGG 0.584383 1_4:+59121110 None:intergenic
GGCTGGTGGACTAATTGTAG+TGG 0.585055 1_4:-59117868 Msa0173760:CDS
ACAATTGCCACCAATATGGC+TGG 0.589742 1_4:-59120741 Msa0173760:CDS
GAAATGGCGTGCAGTTGTTG+TGG 0.590328 1_4:-59121162 Msa0173760:CDS
AGAGTTGTTAAGCTAACTGA+AGG 0.591731 1_4:-59119196 Msa0173760:CDS
CACGGAGGAAGAGAGGAAGA+AGG 0.592817 1_4:-59117975 Msa0173760:intron
TGCATTTCTGGAAATCAGCA+AGG 0.593052 1_4:-59118011 Msa0173760:CDS
TGATCTTGAGCAATATCGAT+CGG 0.594268 1_4:-59115965 Msa0173760:CDS
ATTAACTGAGCTGGAAGCAG+AGG 0.594366 1_4:-59118212 Msa0173760:CDS
CTGAAGCTGCGTGGTCGAAG+TGG 0.599230 1_4:-59117633 Msa0173760:intron
GTCTTCTCTCTGTATAAACC+CGG 0.599802 1_4:+59117288 None:intergenic
AACCTCCTCCTAGTAAGACA+TGG 0.600924 1_4:-59119153 Msa0173760:CDS
AAAACCAGAAAATGTTGAGA+GGG 0.601818 1_4:-59120805 Msa0173760:CDS
AAATCTTCACGGAGGAAGAG+AGG 0.603524 1_4:-59117982 Msa0173760:CDS
GTCCGGATTATGAGGGATTG+CGG 0.604074 1_4:-59116465 Msa0173760:CDS
AATGGAGACTTTACCTCATG+CGG 0.606353 1_4:+59121038 None:intergenic
TTCGTGAGATACTGATGCCA+AGG 0.606540 1_4:-59120662 Msa0173760:intron
GTAAACGGAATGCACGCACT+CGG 0.609278 1_4:-59115594 Msa0173760:CDS
GGAACGGATATAATCCTTGG+CGG 0.614653 1_4:-59120714 Msa0173760:CDS
ACCTTCCATGTCTTACTAGG+AGG 0.614804 1_4:+59119148 None:intergenic
TCGCCGTGATTCATGACGCT+CGG 0.615149 1_4:+59117842 None:intergenic
GTACCGAGCGTCATGAATCA+CGG 0.620256 1_4:-59117845 Msa0173760:CDS
GTTTACGAGGGTATGCGCAA+CGG 0.622357 1_4:-59115893 Msa0173760:CDS
CTTTAATTTCTGAAGCTGCG+TGG 0.627294 1_4:-59117642 Msa0173760:intron
ATCTGACCCCTGATTTGCTG+AGG 0.627795 1_4:-59116495 Msa0173760:CDS
CAATTGGCTGTTAAAGCATG+GGG 0.628709 1_4:-59118244 Msa0173760:CDS
AAGCAGTTGAAGCAAAGGAA+GGG 0.629187 1_4:-59121809 Msa0173760:CDS
TCTACTGATAGGGGAGAAGG+TGG 0.629536 1_4:-59121848 None:intergenic
TCCTCCTAGTAAGACATGGA+AGG 0.632676 1_4:-59119149 Msa0173760:intron
AGCAAGCTGTGGGTTTACGA+GGG 0.634556 1_4:-59115905 Msa0173760:CDS
AATGAGTGTCCGGATTATGA+GGG 0.641462 1_4:-59116472 Msa0173760:CDS
GCTGGTGGACTAATTGTAGT+GGG 0.643146 1_4:-59117867 Msa0173760:CDS
CAAGGATTATATCCGTTCCA+CGG 0.652188 1_4:+59120718 None:intergenic
ACATCTGGGACTCAATAGGT+AGG 0.654142 1_4:+59117414 None:intergenic
ACCGGGTTTGATGAAAGAAG+CGG 0.654654 1_4:-59115997 Msa0173760:CDS
CTCATTCCTCAGCAAATCAG+GGG 0.657841 1_4:+59116489 None:intergenic
GGAAGCTGGAATCCCGCATG+AGG 0.658899 1_4:-59121051 Msa0173760:intron
GTAATGCTGAATTTATGGCA+CGG 0.663025 1_4:-59120692 Msa0173760:CDS
GATACCAATCCAGATCCAGT+TGG 0.663131 1_4:-59115568 Msa0173760:CDS
TCGTGCCAACAAGCACAGGT+CGG 0.690297 1_4:+59121114 None:intergenic
CTTAATGAAAGCTTTCAGAG+TGG 0.693728 1_4:-59117441 Msa0173760:CDS
GCAGAAATTGTAGCACAGAG+TGG 0.700331 1_4:-59120780 Msa0173760:CDS
GGAATATAAAATCTTCACGG+AGG 0.717759 1_4:-59117990 Msa0173760:CDS
GTTTGATGAAAGAAGCGGAG+CGG 0.723187 1_4:-59115992 Msa0173760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTATAAATTTTT+TGG - chr1_4:59121004-59121023 Msa0173760:intron 0.0%
!!! TATTTTATTATAAATTTTTT+GGG - chr1_4:59121005-59121024 Msa0173760:intron 0.0%
!!! CAAAATTTTATAACTTTTTA+TGG - chr1_4:59117670-59117689 Msa0173760:intron 10.0%
!!! ATATTTTAAATATTTAACCT+TGG - chr1_4:59119704-59119723 Msa0173760:intron 10.0%
!! AAAAAAAAAAAAAATACAAC+TGG + chr1_4:59120469-59120488 None:intergenic 10.0%
!!! AATTATTTTTATCAAATACT+TGG - chr1_4:59120719-59120738 Msa0173760:CDS 10.0%
!! TTAAGATCTTTAATTATTAA+TGG + chr1_4:59121167-59121186 None:intergenic 10.0%
!! TAGAAACAAATTATTCAAAA+AGG + chr1_4:59116411-59116430 None:intergenic 15.0%
!!! GAATAATTTGTTTCTAAAAA+AGG - chr1_4:59116415-59116434 Msa0173760:intron 15.0%
!!! CTGTTTTAATTTTTGTTTTA+AGG - chr1_4:59116533-59116552 Msa0173760:intron 15.0%
!!! CAAAATTTGACAATTTTTTA+GGG + chr1_4:59117427-59117446 None:intergenic 15.0%
!!! ACAAAATTTGACAATTTTTT+AGG + chr1_4:59117428-59117447 None:intergenic 15.0%
!! AAAAAGTCATTAAAAGTTTA+AGG - chr1_4:59117547-59117566 Msa0173760:intron 15.0%
!! AAAATCATCTAATGAATAAA+TGG - chr1_4:59117804-59117823 Msa0173760:intron 15.0%
!!! TAGTAAATATCTTTCTTTTA+TGG - chr1_4:59121076-59121095 Msa0173760:CDS 15.0%
!!! AGTAAATATCTTTCTTTTAT+GGG - chr1_4:59121077-59121096 Msa0173760:CDS 15.0%
!! AATTATAAAAAAGGATAAGA+GGG + chr1_4:59121634-59121653 None:intergenic 15.0%
!! AAATTATAAAAAAGGATAAG+AGG + chr1_4:59121635-59121654 None:intergenic 15.0%
!!! ATCCTTTTTTATAATTTTTG+TGG - chr1_4:59121638-59121657 Msa0173760:intron 15.0%
!! ATCCACAAAAATTATAAAAA+AGG + chr1_4:59121643-59121662 None:intergenic 15.0%
!! TTTATTAAAGTGTAGCATAT+GGG + chr1_4:59115883-59115902 None:intergenic 20.0%
!!! ATTACGAAAATTGTTTTATC+AGG + chr1_4:59116113-59116132 None:intergenic 20.0%
!! AAGAAAATAAAAACACCATA+AGG + chr1_4:59116148-59116167 None:intergenic 20.0%
!!! CATTTTAAATTATATGCTAC+AGG + chr1_4:59116797-59116816 None:intergenic 20.0%
!! GTATTGCATGTTAAAAAAAA+CGG - chr1_4:59116946-59116965 Msa0173760:intron 20.0%
!! TTAAAAAAAACGGCTAAATA+AGG - chr1_4:59116956-59116975 Msa0173760:intron 20.0%
!! AAACAAATTTGAATTCAACA+GGG + chr1_4:59117519-59117538 None:intergenic 20.0%
!! AAAACAAATTTGAATTCAAC+AGG + chr1_4:59117520-59117539 None:intergenic 20.0%
!! TGAACAAATTTGAATTTAAC+TGG - chr1_4:59117575-59117594 Msa0173760:CDS 20.0%
!! GAACAAATTTGAATTTAACT+GGG - chr1_4:59117576-59117595 Msa0173760:CDS 20.0%
!!! AATTAAGATATCACTTGTTA+GGG + chr1_4:59117713-59117732 None:intergenic 20.0%
!! TAACAAGTGATATCTTAATT+GGG - chr1_4:59117713-59117732 Msa0173760:intron 20.0%
!! AAAGATAGATAATGAGAAAA+AGG + chr1_4:59118478-59118497 None:intergenic 20.0%
!!! CAGTATTTTTATTTGATAGT+TGG + chr1_4:59119087-59119106 None:intergenic 20.0%
!! ATCAAATAAAAATACTGAGT+TGG - chr1_4:59119090-59119109 Msa0173760:intron 20.0%
!! GGCTAGTATAATTATTAAAA+AGG - chr1_4:59119224-59119243 Msa0173760:intron 20.0%
!!! GTCTTGAAGATAATATTTTT+CGG - chr1_4:59119799-59119818 Msa0173760:intron 20.0%
!!! GATAATATTTTTCGGATATT+TGG - chr1_4:59119807-59119826 Msa0173760:intron 20.0%
!! AAATTCATGGCAAATTAATT+CGG + chr1_4:59120520-59120539 None:intergenic 20.0%
!! AATTGTTATATCCAAATTAG+AGG + chr1_4:59120761-59120780 None:intergenic 20.0%
!! AATTGTTATATCCAAATTAG+AGG + chr1_4:59120761-59120780 None:intergenic 20.0%
!! TATTTACTAATAGATTGTAG+TGG + chr1_4:59121065-59121084 None:intergenic 20.0%
!! TAAAACCAATAACTTCATAA+TGG + chr1_4:59121214-59121233 None:intergenic 20.0%
!! GGAAAAATCAAACAAAATAA+AGG + chr1_4:59121308-59121327 None:intergenic 20.0%
!! TGTTATATATTCCATATATC+AGG - chr1_4:59121572-59121591 Msa0173760:CDS 20.0%
! GCACAGATTTAAAAACATTA+AGG + chr1_4:59115720-59115739 None:intergenic 25.0%
! AAACAAACCTATGATAAGAA+AGG - chr1_4:59115840-59115859 Msa0173760:CDS 25.0%
! GTTTATTAAAGTGTAGCATA+TGG + chr1_4:59115884-59115903 None:intergenic 25.0%
! AAAATATCAATCATCCCATT+CGG + chr1_4:59115946-59115965 None:intergenic 25.0%
!! TATTATTATAGTTCTGCAAG+AGG - chr1_4:59116005-59116024 Msa0173760:CDS 25.0%
! AACTCATAAGATGAAAAGTA+AGG + chr1_4:59116073-59116092 None:intergenic 25.0%
! AATGTTTCTCAAATTCCTTA+TGG - chr1_4:59116130-59116149 Msa0173760:intron 25.0%
!!! GTGTTTTTATTTTCTTTCTC+AGG - chr1_4:59116152-59116171 Msa0173760:intron 25.0%
!!! TTTACTCTCATGCTTTAAAA+TGG + chr1_4:59116493-59116512 None:intergenic 25.0%
!! ACATACCATTTTCTTTTATG+AGG + chr1_4:59117458-59117477 None:intergenic 25.0%
!!! ATGCCACTTTTTTTTTTATG+CGG - chr1_4:59117639-59117658 Msa0173760:intron 25.0%
! CAATTAAGATATCACTTGTT+AGG + chr1_4:59117714-59117733 None:intergenic 25.0%
! CTAACAAGTGATATCTTAAT+TGG - chr1_4:59117712-59117731 Msa0173760:intron 25.0%
! ATCTTTCTATACCATATAGT+TGG - chr1_4:59117947-59117966 Msa0173760:intron 25.0%
! TCTAAACAAATCCAACTATA+TGG + chr1_4:59117961-59117980 None:intergenic 25.0%
!! ATATAGTTGGATTTGTTTAG+AGG - chr1_4:59117960-59117979 Msa0173760:intron 25.0%
!! TATAGTTGGATTTGTTTAGA+GGG - chr1_4:59117961-59117980 Msa0173760:intron 25.0%
! TATTCCTCATATAAATGAAG+TGG - chr1_4:59118279-59118298 Msa0173760:CDS 25.0%
! CATCTTGTAAAAAAACAAAC+AGG + chr1_4:59118332-59118351 None:intergenic 25.0%
! GTTAATTAAATTGCCAAACT+GGG - chr1_4:59118617-59118636 Msa0173760:intron 25.0%
! CAAACTAATAATGTTGGATT+TGG + chr1_4:59118700-59118719 None:intergenic 25.0%
! ATTGACTATAGAAGTTATCT+GGG - chr1_4:59118794-59118813 Msa0173760:intron 25.0%
!!! TTTTTATTTGATAGTTGGCA+TGG + chr1_4:59119082-59119101 None:intergenic 25.0%
!! TATTTTGTACTATTGCATTG+TGG - chr1_4:59119288-59119307 Msa0173760:intron 25.0%
! CAAGGAATATAAAATCTTCA+CGG - chr1_4:59119378-59119397 Msa0173760:intron 25.0%
! GTATAAATGACAAAAGATCA+TGG + chr1_4:59119449-59119468 None:intergenic 25.0%
!!! ACAATACTATTTTTCTGGAA+GGG + chr1_4:59119678-59119697 None:intergenic 25.0%
!!! AGTTGACAATACTATTTTTC+TGG + chr1_4:59119683-59119702 None:intergenic 25.0%
!!! AATATTTTTCGGATATTTGG+TGG - chr1_4:59119810-59119829 Msa0173760:intron 25.0%
! AACTAAATAATCTGATATGC+AGG - chr1_4:59119906-59119925 Msa0173760:intron 25.0%
! ACTAAATAATCTGATATGCA+GGG - chr1_4:59119907-59119926 Msa0173760:intron 25.0%
!! AGAACTATTTCTTTGACATT+CGG - chr1_4:59120016-59120035 Msa0173760:intron 25.0%
!!! AAGAACCATAATTTTAGCAT+AGG + chr1_4:59120188-59120207 None:intergenic 25.0%
! ATACAATCTTGTGATGAATT+AGG - chr1_4:59120239-59120258 Msa0173760:intron 25.0%
! CTGTATAACTAAACAAAAGA+AGG + chr1_4:59120364-59120383 None:intergenic 25.0%
! TAGTAATTTGGATCAAATTG+AGG - chr1_4:59121136-59121155 Msa0173760:CDS 25.0%
! CTAAACCATTATGAAGTTAT+TGG - chr1_4:59121206-59121225 Msa0173760:intron 25.0%
! TCAAGTTTATATTCGATAAG+TGG + chr1_4:59121507-59121526 None:intergenic 25.0%
! ACTTATCGAATATAAACTTG+AGG - chr1_4:59121506-59121525 Msa0173760:intron 25.0%
! CTTATCGAATATAAACTTGA+GGG - chr1_4:59121507-59121526 Msa0173760:intron 25.0%
AAACATTAAGGTAGTTTCCA+CGG + chr1_4:59115708-59115727 None:intergenic 30.0%
! CTTATCATAGGTTTGTTTGT+AGG + chr1_4:59115838-59115857 None:intergenic 30.0%
TAAGAGACCTTTCTTATCAT+AGG + chr1_4:59115850-59115869 None:intergenic 30.0%
TTTCCATCAAAAGTAGAGTT+TGG - chr1_4:59116044-59116063 Msa0173760:intron 30.0%
! ATGAATCTGATGTAGTTTTC+AGG - chr1_4:59116175-59116194 Msa0173760:intron 30.0%
! TGAATCTGATGTAGTTTTCA+GGG - chr1_4:59116176-59116195 Msa0173760:intron 30.0%
AAAGTCTCCATTGTCTTAAT+AGG - chr1_4:59116344-59116363 Msa0173760:intron 30.0%
TCCATTGTCTTAATAGGAAA+TGG - chr1_4:59116350-59116369 Msa0173760:intron 30.0%
TCCATTTCCTATTAAGACAA+TGG + chr1_4:59116354-59116373 None:intergenic 30.0%
AAAACCAGAAAATGTTGAGA+GGG - chr1_4:59116566-59116585 Msa0173760:intron 30.0%
! TTTGATTTCTAAAGGAACAC+AGG + chr1_4:59116828-59116847 None:intergenic 30.0%
! CTGCTTGATTTGATTTCTAA+AGG + chr1_4:59116836-59116855 None:intergenic 30.0%
GATAAAAAGAGATGAGATAC+TGG - chr1_4:59116902-59116921 Msa0173760:intron 30.0%
! AGTGAGAATTTGTTTATCCA+TGG - chr1_4:59117006-59117025 Msa0173760:intron 30.0%
! TTGTTTTCACAAAGCAACAA+AGG + chr1_4:59117163-59117182 None:intergenic 30.0%
ATACCATTTCTATCTTGACA+GGG - chr1_4:59117194-59117213 Msa0173760:intron 30.0%
TTCGTCCTCATAAAAGAAAA+TGG - chr1_4:59117450-59117469 Msa0173760:intron 30.0%
!!! TGCCTGCTGAAATTTTTTAA+AGG - chr1_4:59117607-59117626 Msa0173760:CDS 30.0%
!!! GCCTGCTGAAATTTTTTAAA+GGG - chr1_4:59117608-59117627 Msa0173760:CDS 30.0%
! TCCCTTTAAAAAATTTCAGC+AGG + chr1_4:59117612-59117631 None:intergenic 30.0%
AATCTCCTTGATCATATTGT+AGG - chr1_4:59117913-59117932 Msa0173760:intron 30.0%
TTAGACCTACAATATGATCA+AGG + chr1_4:59117921-59117940 None:intergenic 30.0%
TATGCATATACAGCTATCAT+AGG + chr1_4:59117992-59118011 None:intergenic 30.0%
TTTGATGGGAAAAATACTTC+TGG - chr1_4:59118069-59118088 Msa0173760:intron 30.0%
GATAATAGGAATCTAAGCAT+AGG + chr1_4:59118100-59118119 None:intergenic 30.0%
GAAAGACAAACTCTGATAAT+AGG + chr1_4:59118114-59118133 None:intergenic 30.0%
AACTGTGTTTCATTCTTTCT+GGG - chr1_4:59118139-59118158 Msa0173760:intron 30.0%
! AACTGAAGGAGATTTTGTAT+CGG - chr1_4:59118189-59118208 Msa0173760:CDS 30.0%
CTTGTAAAAAAACAAACAGG+AGG + chr1_4:59118329-59118348 None:intergenic 30.0%
! TGTGGTTTAAATGAAAGTGT+GGG + chr1_4:59118362-59118381 None:intergenic 30.0%
ATGTGGTTTAAATGAAAGTG+TGG + chr1_4:59118363-59118382 None:intergenic 30.0%
GATATATGTGACACATTACT+TGG - chr1_4:59118411-59118430 Msa0173760:intron 30.0%
GATAGATAATGAGAAAAAGG+AGG + chr1_4:59118475-59118494 None:intergenic 30.0%
TGTTCGTTAGAATGAATCAA+TGG - chr1_4:59118595-59118614 Msa0173760:intron 30.0%
GGTTAATTAAATTGCCAAAC+TGG - chr1_4:59118616-59118635 Msa0173760:intron 30.0%
ACTAATAATGTTGGATTTGG+CGG + chr1_4:59118697-59118716 None:intergenic 30.0%
GCATTGCAAACTAATAATGT+TGG + chr1_4:59118706-59118725 None:intergenic 30.0%
! TGATTTTTATCCGTTGTTCA+AGG + chr1_4:59118775-59118794 None:intergenic 30.0%
! CATTGACTATAGAAGTTATC+TGG - chr1_4:59118793-59118812 Msa0173760:intron 30.0%
ATCTGGAAATATGGCTAAAA+AGG - chr1_4:59118881-59118900 Msa0173760:intron 30.0%
GAAATATGGCTAAAAAGGAA+TGG - chr1_4:59118886-59118905 Msa0173760:intron 30.0%
! AAAAGGTGACATTTTGTTGA+TGG - chr1_4:59119203-59119222 Msa0173760:intron 30.0%
!!! TCTCTGTTTTAATACTTGTG+TGG - chr1_4:59119259-59119278 Msa0173760:intron 30.0%
! TTGCATTGTGGATTTTATGT+AGG - chr1_4:59119300-59119319 Msa0173760:intron 30.0%
! TGCATTGTGGATTTTATGTA+GGG - chr1_4:59119301-59119320 Msa0173760:intron 30.0%
AAGGTCAATGTGTTTAATTG+AGG - chr1_4:59119415-59119434 Msa0173760:intron 30.0%
!! GACAATACTATTTTTCTGGA+AGG + chr1_4:59119679-59119698 None:intergenic 30.0%
CTTCAGAAATTAAAGTTCCA+AGG + chr1_4:59119724-59119743 None:intergenic 30.0%
ATAACCACATTACCTGAATT+CGG + chr1_4:59119839-59119858 None:intergenic 30.0%
TTAGTTGTTAACCATGTCTT+AGG + chr1_4:59119892-59119911 None:intergenic 30.0%
! ATAGTTCTCCACTTTCTTTT+GGG + chr1_4:59120004-59120023 None:intergenic 30.0%
! AATAGTTCTCCACTTTCTTT+TGG + chr1_4:59120005-59120024 None:intergenic 30.0%
! GACAATAGATGACATTTTAG+AGG - chr1_4:59120158-59120177 Msa0173760:intron 30.0%
GTAAGCCTATGCTAAAATTA+TGG - chr1_4:59120180-59120199 Msa0173760:intron 30.0%
TTGCATTACATGATGAAGTA+AGG + chr1_4:59120217-59120236 None:intergenic 30.0%
!!! ACCTTGTTTTTGCAAATTCA+TGG + chr1_4:59120533-59120552 None:intergenic 30.0%
ATGAATTTGCAAAAACAAGG+TGG - chr1_4:59120532-59120551 Msa0173760:intron 30.0%
!!! TGGTTTTAAATTGTCGTCAT+TGG - chr1_4:59121226-59121245 Msa0173760:intron 30.0%
AAAGGACTTAAGTACCAATT+GGG + chr1_4:59121677-59121696 None:intergenic 30.0%
AAAAGGACTTAAGTACCAAT+TGG + chr1_4:59121678-59121697 None:intergenic 30.0%
GACAGAATGCAATAAAGAAA+AGG + chr1_4:59121695-59121714 None:intergenic 30.0%
AGAATCAGAAATCAGGTAAA+CGG - chr1_4:59121762-59121781 Msa0173760:CDS 30.0%
! GTCACAGTTTCATTTTGGAT+GGG + chr1_4:59115591-59115610 None:intergenic 35.0%
! TGTCACAGTTTCATTTTGGA+TGG + chr1_4:59115592-59115611 None:intergenic 35.0%
TTACCAGAATTTCTTTCTGC+AGG - chr1_4:59115626-59115645 Msa0173760:CDS 35.0%
!! GTTCAGAATTTTATTTGCCG+TGG - chr1_4:59115688-59115707 Msa0173760:intron 35.0%
TTACAGTTCCCAAAACTATG+TGG - chr1_4:59115742-59115761 Msa0173760:intron 35.0%
!! CTTCCAAACTCTACTTTTGA+TGG + chr1_4:59116050-59116069 None:intergenic 35.0%
!! ATCTCTAGAATGCACAAAAC+TGG - chr1_4:59116234-59116253 Msa0173760:intron 35.0%
TTCTTTGTCTGAGCAATTGA+AGG - chr1_4:59116299-59116318 Msa0173760:intron 35.0%
CATTGATCTAGGCTAAGAAT+AGG + chr1_4:59116445-59116464 None:intergenic 35.0%
!!! AGTTTTAGCAGCATTGATCT+AGG + chr1_4:59116456-59116475 None:intergenic 35.0%
!! CTTTAAAATGGAAGAGCAGT+TGG + chr1_4:59116481-59116500 None:intergenic 35.0%
CAAAACCAGAAAATGTTGAG+AGG - chr1_4:59116565-59116584 Msa0173760:intron 35.0%
GTAATGCTGAATTTATGGCA+CGG - chr1_4:59116679-59116698 Msa0173760:intron 35.0%
AAAGAGATGAGATACTGGTA+TGG - chr1_4:59116907-59116926 Msa0173760:intron 35.0%
AAGAGATGAGATACTGGTAT+GGG - chr1_4:59116908-59116927 Msa0173760:intron 35.0%
! TTTTCACAAAGCAACAAAGG+AGG + chr1_4:59117160-59117179 None:intergenic 35.0%
GATACCATTTCTATCTTGAC+AGG - chr1_4:59117193-59117212 Msa0173760:intron 35.0%
! CTTTACTGTCACTTAATCTC+AGG + chr1_4:59117313-59117332 None:intergenic 35.0%
GCGTCCTTATAAAATATTCC+AGG - chr1_4:59117480-59117499 Msa0173760:intron 35.0%
! GCGTCCTGGAATATTTTATA+AGG + chr1_4:59117487-59117506 None:intergenic 35.0%
TATAAAATATTCCAGGACGC+AGG - chr1_4:59117487-59117506 Msa0173760:intron 35.0%
CGTCCGCATAAAAAAAAAAG+TGG + chr1_4:59117645-59117664 None:intergenic 35.0%
TAGTTTATCATTCTGCTGGA+GGG + chr1_4:59117750-59117769 None:intergenic 35.0%
ATAGTTTATCATTCTGCTGG+AGG + chr1_4:59117751-59117770 None:intergenic 35.0%
AGGATAGTTTATCATTCTGC+TGG + chr1_4:59117754-59117773 None:intergenic 35.0%
CATCATTAGCATCATGTCAA+AGG + chr1_4:59117774-59117793 None:intergenic 35.0%
CTTTGACATGATGCTAATGA+TGG - chr1_4:59117772-59117791 Msa0173760:intron 35.0%
TATCAGTGACAAATGAATCC+TGG + chr1_4:59118045-59118064 None:intergenic 35.0%
TGTCACTGATACAACTTTGA+TGG - chr1_4:59118054-59118073 Msa0173760:intron 35.0%
GTCACTGATACAACTTTGAT+GGG - chr1_4:59118055-59118074 Msa0173760:intron 35.0%
GAACTGTGTTTCATTCTTTC+TGG - chr1_4:59118138-59118157 Msa0173760:intron 35.0%
AGAGTTGTTAAGCTAACTGA+AGG - chr1_4:59118175-59118194 Msa0173760:intron 35.0%
CACACCACTTCATTTATATG+AGG + chr1_4:59118286-59118305 None:intergenic 35.0%
TAAATGAAGTGGTGTGTGTA+AGG - chr1_4:59118290-59118309 Msa0173760:CDS 35.0%
AAATGAAGTGGTGTGTGTAA+GGG - chr1_4:59118291-59118310 Msa0173760:CDS 35.0%
ACCACATCTGCTTTCTATAA+AGG - chr1_4:59118376-59118395 Msa0173760:intron 35.0%
TCCTTTATAGAAAGCAGATG+TGG + chr1_4:59118380-59118399 None:intergenic 35.0%
CATGTTCTAGTACTCAGAAA+AGG - chr1_4:59118524-59118543 Msa0173760:intron 35.0%
AAAATATTGTAGTCGAACCC+AGG - chr1_4:59118744-59118763 Msa0173760:intron 35.0%
! AGAGAAGAAATGATGGTGAA+AGG - chr1_4:59118850-59118869 Msa0173760:intron 35.0%
! GAGAAGAAATGATGGTGAAA+GGG - chr1_4:59118851-59118870 Msa0173760:intron 35.0%
! AGAAGAAATGATGGTGAAAG+GGG - chr1_4:59118852-59118871 Msa0173760:intron 35.0%
! TAAAAATACTGAGTTGGCTG+AGG - chr1_4:59119096-59119115 Msa0173760:intron 35.0%
AAAGAGATCATTAACTGAGC+TGG - chr1_4:59119150-59119169 Msa0173760:CDS 35.0%
! CCTTTTCACAGGAATATGAT+AGG + chr1_4:59119189-59119208 None:intergenic 35.0%
CCTATCATATTCCTGTGAAA+AGG - chr1_4:59119186-59119205 Msa0173760:CDS 35.0%
! ACAAAATGTCACCTTTTCAC+AGG + chr1_4:59119200-59119219 None:intergenic 35.0%
GGAATATAAAATCTTCACGG+AGG - chr1_4:59119381-59119400 Msa0173760:intron 35.0%
!!! GTTATAAGCATTTTGACTGC+AGG - chr1_4:59119473-59119492 Msa0173760:intron 35.0%
!! TACTATTTTTCTGGAAGGGA+AGG + chr1_4:59119674-59119693 None:intergenic 35.0%
GAATTCAGGTAATGTGGTTA+TGG - chr1_4:59119838-59119857 Msa0173760:intron 35.0%
! GGATTTGATTTCCTAAGACA+TGG - chr1_4:59119878-59119897 Msa0173760:intron 35.0%
CTTAATGAAAGCTTTCAGAG+TGG - chr1_4:59119930-59119949 Msa0173760:intron 35.0%
TAATGCTTTGGTCAACATCT+GGG + chr1_4:59119974-59119993 None:intergenic 35.0%
TACTTAATAGCCAAAGAGAC+CGG - chr1_4:59120064-59120083 Msa0173760:intron 35.0%
CTGAAGATTGTCAGATTGAA+GGG + chr1_4:59120112-59120131 None:intergenic 35.0%
ACTGAAGATTGTCAGATTGA+AGG + chr1_4:59120113-59120132 None:intergenic 35.0%
CAAAAGATTTCACTTACTGC+TGG + chr1_4:59120326-59120345 None:intergenic 35.0%
CCTACTTAACAAGAATACAG+AGG + chr1_4:59120401-59120420 None:intergenic 35.0%
CCTCTGTATTCTTGTTAAGT+AGG - chr1_4:59120398-59120417 Msa0173760:intron 35.0%
GCAAATTAATTCGGCCTATT+TGG + chr1_4:59120511-59120530 None:intergenic 35.0%
GCCATGAATTTGCAAAAACA+AGG - chr1_4:59120529-59120548 Msa0173760:intron 35.0%
!! AAGTTGATAGTTCTCTTGGT+TGG + chr1_4:59120628-59120647 None:intergenic 35.0%
!! AGCAAAGTTGATAGTTCTCT+TGG + chr1_4:59120632-59120651 None:intergenic 35.0%
AAGAGAACTATCAACTTTGC+TGG - chr1_4:59120631-59120650 Msa0173760:intron 35.0%
ATTAGAGGAAAACATGCACT+AGG + chr1_4:59120746-59120765 None:intergenic 35.0%
! GTGCATGTTTTCCTCTAATT+TGG - chr1_4:59120747-59120766 Msa0173760:CDS 35.0%
! GTGCATGTTTTCCTCTAATT+TGG - chr1_4:59120747-59120766 Msa0173760:CDS 35.0%
AAGAAGCCTATCTGCAAAAA+AGG - chr1_4:59120951-59120970 Msa0173760:intron 35.0%
AGAAGCCTATCTGCAAAAAA+GGG - chr1_4:59120952-59120971 Msa0173760:intron 35.0%
!!! ACTTACCCTTTTTTGCAGAT+AGG + chr1_4:59120960-59120979 None:intergenic 35.0%
! CTTTTATGGGATCTGATGTA+TGG - chr1_4:59121090-59121109 Msa0173760:CDS 35.0%
TTACTACGAGACTTGTACAT+CGG + chr1_4:59121122-59121141 None:intergenic 35.0%
GTACAAGTCTCGTAGTAATT+TGG - chr1_4:59121124-59121143 Msa0173760:CDS 35.0%
!! TTCTGACAATTGATAGTGCT+TGG - chr1_4:59121261-59121280 Msa0173760:intron 35.0%
AATGCTGCCATAGGATATTA+CGG - chr1_4:59121341-59121360 Msa0173760:intron 35.0%
TGATCTTGAGCAATATCGAT+CGG - chr1_4:59121406-59121425 Msa0173760:intron 35.0%
! AAAATTTGTTCAGCAAGCTG+TGG - chr1_4:59121455-59121474 Msa0173760:intron 35.0%
! AAATTTGTTCAGCAAGCTGT+GGG - chr1_4:59121456-59121475 Msa0173760:intron 35.0%
ATCAGTGCAAACCTGATATA+TGG + chr1_4:59121586-59121605 None:intergenic 35.0%
!! TTGCACTGATCTGGAATTTT+AGG - chr1_4:59121596-59121615 Msa0173760:CDS 35.0%
AAGGACTTAAGTACCAATTG+GGG + chr1_4:59121676-59121695 None:intergenic 35.0%
AAAGCTGAGAATCAGAAATC+AGG - chr1_4:59121755-59121774 Msa0173760:CDS 35.0%
AAGCAGTTGAAGCAAAGGAA+GGG - chr1_4:59115562-59115581 Msa0173760:CDS 40.0%
! CCAGTGTCACAGTTTCATTT+TGG + chr1_4:59115596-59115615 None:intergenic 40.0%
CCAAAATGAAACTGTGACAC+TGG - chr1_4:59115593-59115612 Msa0173760:CDS 40.0%
CAACCTGCAGAAAGAAATTC+TGG + chr1_4:59115632-59115651 None:intergenic 40.0%
CAGAATTTCTTTCTGCAGGT+TGG - chr1_4:59115630-59115649 Msa0173760:CDS 40.0%
! CAGTCATGCCACATAGTTTT+GGG + chr1_4:59115753-59115772 None:intergenic 40.0%
CAATCATCCCATTCGGAAAT+CGG + chr1_4:59115939-59115958 None:intergenic 40.0%
! TATAGTTCTGCAAGAGGTAG+TGG - chr1_4:59116011-59116030 Msa0173760:CDS 40.0%
!! TAGTTTTCAGGGCTACTAGA+GGG - chr1_4:59116187-59116206 Msa0173760:intron 40.0%
AATGGAGACTTTACCTCATG+CGG + chr1_4:59116336-59116355 None:intergenic 40.0%
TGTGACAATTGCCACCAATA+TGG - chr1_4:59116626-59116645 Msa0173760:intron 40.0%
CAAGGATTATATCCGTTCCA+CGG + chr1_4:59116656-59116675 None:intergenic 40.0%
TAAATTCAGCATTACCGCCA+AGG + chr1_4:59116674-59116693 None:intergenic 40.0%
TGGCGGTAATGCTGAATTTA+TGG - chr1_4:59116674-59116693 Msa0173760:intron 40.0%
ATTAAAGCTCCACCATACCT+TGG + chr1_4:59116729-59116748 None:intergenic 40.0%
! AGGTATGGTGGAGCTTTAAT+TGG - chr1_4:59116729-59116748 Msa0173760:intron 40.0%
TGTCTTGAAGAGAAGGAGAT+AGG - chr1_4:59116856-59116875 Msa0173760:intron 40.0%
GAGATAGGTTTAGTGTGAGT+AGG - chr1_4:59116871-59116890 Msa0173760:intron 40.0%
TTATCCATGGAGAAAGAGAG+TGG - chr1_4:59117019-59117038 Msa0173760:intron 40.0%
CTAAGAAACCCTGAGATCAA+AGG + chr1_4:59117121-59117140 None:intergenic 40.0%
TCTCCCTGTCAAGATAGAAA+TGG + chr1_4:59117200-59117219 None:intergenic 40.0%
AAAGAATGTCAACGTGGCTA+GGG + chr1_4:59117346-59117365 None:intergenic 40.0%
AAAAGAATGTCAACGTGGCT+AGG + chr1_4:59117347-59117366 None:intergenic 40.0%
GGGAAAAAAGAATGTCAACG+TGG + chr1_4:59117352-59117371 None:intergenic 40.0%
TAACTCTACTCACTAACTCG+AGG + chr1_4:59117390-59117409 None:intergenic 40.0%
CATACCTTCCATGTCTTACT+AGG + chr1_4:59118229-59118248 None:intergenic 40.0%
CTAGTAAGACATGGAAGGTA+TGG - chr1_4:59118227-59118246 Msa0173760:CDS 40.0%
AATGAAGTGGTGTGTGTAAG+GGG - chr1_4:59118292-59118311 Msa0173760:CDS 40.0%
TCAGAAAAGGATTCCACTTG+TGG - chr1_4:59118537-59118556 Msa0173760:intron 40.0%
CAGAAAAGGATTCCACTTGT+GGG - chr1_4:59118538-59118557 Msa0173760:intron 40.0%
! CTTAATGCTTTTCCCACAAG+TGG + chr1_4:59118553-59118572 None:intergenic 40.0%
! AGAGTATTCTCTGGGCTTAA+TGG + chr1_4:59118669-59118688 None:intergenic 40.0%
CAATGCTGAACAGTATGCAT+AGG - chr1_4:59118720-59118739 Msa0173760:intron 40.0%
TGCCAACAGAGAAGAAATGA+TGG - chr1_4:59118843-59118862 Msa0173760:intron 40.0%
CACCATCATTTCTTCTCTGT+TGG + chr1_4:59118848-59118867 None:intergenic 40.0%
! GAAGAAATGATGGTGAAAGG+GGG - chr1_4:59118853-59118872 Msa0173760:intron 40.0%
GGCTAAAAAGGAATGGAAGT+TGG - chr1_4:59118893-59118912 Msa0173760:intron 40.0%
TGTATGTGTGTGTATGCACA+TGG - chr1_4:59118995-59119014 Msa0173760:intron 40.0%
AACTCCACATGTCATTATCC+AGG - chr1_4:59119039-59119058 Msa0173760:intron 40.0%
TTCACCTGGATAATGACATG+TGG + chr1_4:59119046-59119065 None:intergenic 40.0%
GAAACAACTTGTCATTCACC+TGG + chr1_4:59119060-59119079 None:intergenic 40.0%
TGCTTTAACAGCCAATTGCA+CGG + chr1_4:59119125-59119144 None:intergenic 40.0%
TGCAATTGGCTGTTAAAGCA+TGG - chr1_4:59119125-59119144 Msa0173760:intron 40.0%
GCAATTGGCTGTTAAAGCAT+GGG - chr1_4:59119126-59119145 Msa0173760:intron 40.0%
CAATTGGCTGTTAAAGCATG+GGG - chr1_4:59119127-59119146 Msa0173760:intron 40.0%
! TGCATTTCTGGAAATCAGCA+AGG - chr1_4:59119360-59119379 Msa0173760:intron 40.0%
! TCTTTTCCCCATTTCCTTGT+TGG - chr1_4:59119573-59119592 Msa0173760:intron 40.0%
! CTTTTCCCCATTTCCTTGTT+GGG - chr1_4:59119574-59119593 Msa0173760:intron 40.0%
TTTCGACCCAACAAGGAAAT+GGG + chr1_4:59119583-59119602 None:intergenic 40.0%
TGTTAATGTGCAAGTTGCCA+GGG + chr1_4:59119637-59119656 None:intergenic 40.0%
ATGTTAATGTGCAAGTTGCC+AGG + chr1_4:59119638-59119657 None:intergenic 40.0%
!! CTTTAATTTCTGAAGCTGCG+TGG - chr1_4:59119729-59119748 Msa0173760:intron 40.0%
CTAATGCTTTGGTCAACATC+TGG + chr1_4:59119975-59119994 None:intergenic 40.0%
TTGGGCTTCATCTAATGCTT+TGG + chr1_4:59119986-59120005 None:intergenic 40.0%
AGATGAAGCCCAAAAGAAAG+TGG - chr1_4:59119993-59120012 Msa0173760:intron 40.0%
ACTTAATAGCCAAAGAGACC+GGG - chr1_4:59120065-59120084 Msa0173760:intron 40.0%
GTCTTCTCTCTGTATAAACC+CGG + chr1_4:59120086-59120105 None:intergenic 40.0%
GTGATGAATTAGGCCAACAT+TGG - chr1_4:59120249-59120268 Msa0173760:intron 40.0%
!!! TTGGCTTGTCAAGGTTTTAG+AGG + chr1_4:59120426-59120445 None:intergenic 40.0%
! ATCCTTGCTGTCTACCAAAT+AGG - chr1_4:59120494-59120513 Msa0173760:intron 40.0%
AGAACTAGTGCCAGTTTCAT+GGG - chr1_4:59120564-59120583 Msa0173760:intron 40.0%
TAACTGTTGTCCCATGAAAC+TGG + chr1_4:59120577-59120596 None:intergenic 40.0%
ACTCATTCCTCAGCAAATCA+GGG + chr1_4:59120886-59120905 None:intergenic 40.0%
AATGAGTGTCCGGATTATGA+GGG - chr1_4:59120899-59120918 Msa0173760:intron 40.0%
ATGACTACAAATGCTGCCAT+AGG - chr1_4:59121332-59121351 Msa0173760:intron 40.0%
TGTTGCTCCGTAATATCCTA+TGG + chr1_4:59121351-59121370 None:intergenic 40.0%
GATCGATATTGCTCAAGATC+AGG + chr1_4:59121407-59121426 None:intergenic 40.0%
! CAACCTTTTCTTGGAGATGA+TGG - chr1_4:59121533-59121552 Msa0173760:CDS 40.0%
! ATATCAGGTTTGCACTGATC+TGG - chr1_4:59121587-59121606 Msa0173760:CDS 40.0%
!!! TCTGGAATTTTAGGATCCTG+TGG - chr1_4:59121605-59121624 Msa0173760:CDS 40.0%
! CATGAACTAGCACTTGTTGA+TGG + chr1_4:59121839-59121858 None:intergenic 40.0%
CCTTTGCTTCAACTGCTTGA+TGG + chr1_4:59115560-59115579 None:intergenic 45.0%
CCATCAAGCAGTTGAAGCAA+AGG - chr1_4:59115557-59115576 Msa0173760:CDS 45.0%
CAAGCAGTTGAAGCAAAGGA+AGG - chr1_4:59115561-59115580 Msa0173760:CDS 45.0%
! CCAGTCATGCCACATAGTTT+TGG + chr1_4:59115754-59115773 None:intergenic 45.0%
CCAAAACTATGTGGCATGAC+TGG - chr1_4:59115751-59115770 Msa0173760:intron 45.0%
ATCGGAACACAGATCTCACA+TGG + chr1_4:59115921-59115940 None:intergenic 45.0%
TCTGTGTTCCGATTTCCGAA+TGG - chr1_4:59115928-59115947 Msa0173760:CDS 45.0%
CTGTGTTCCGATTTCCGAAT+GGG - chr1_4:59115929-59115948 Msa0173760:CDS 45.0%
!! GTAGTTTTCAGGGCTACTAG+AGG - chr1_4:59116186-59116205 Msa0173760:intron 45.0%
TCTGAGCAATTGAAGGAAGC+TGG - chr1_4:59116306-59116325 Msa0173760:intron 45.0%
ATGGAGACTTTACCTCATGC+GGG + chr1_4:59116335-59116354 None:intergenic 45.0%
! GCTTCCCTCTCAACATTTTC+TGG + chr1_4:59116573-59116592 None:intergenic 45.0%
GCAGAAATTGTAGCACAGAG+TGG - chr1_4:59116591-59116610 Msa0173760:intron 45.0%
ACAATTGCCACCAATATGGC+TGG - chr1_4:59116630-59116649 Msa0173760:intron 45.0%
CGTGGAACGGATATAATCCT+TGG - chr1_4:59116654-59116673 Msa0173760:intron 45.0%
GGAACGGATATAATCCTTGG+CGG - chr1_4:59116657-59116676 Msa0173760:intron 45.0%
TTCGTGAGATACTGATGCCA+AGG - chr1_4:59116709-59116728 Msa0173760:intron 45.0%
GAGATACTGATGCCAAGGTA+TGG - chr1_4:59116714-59116733 Msa0173760:intron 45.0%
ATACTGATGCCAAGGTATGG+TGG - chr1_4:59116717-59116736 Msa0173760:intron 45.0%
CAGGCAACAAGTACATGGAT+GGG + chr1_4:59116778-59116797 None:intergenic 45.0%
ACAGGCAACAAGTACATGGA+TGG + chr1_4:59116779-59116798 None:intergenic 45.0%
TGCTACAGGCAACAAGTACA+TGG + chr1_4:59116783-59116802 None:intergenic 45.0%
CAAGCAGTGTCTTGAAGAGA+AGG - chr1_4:59116849-59116868 Msa0173760:intron 45.0%
AGATGAGATACTGGTATGGG+TGG - chr1_4:59116911-59116930 Msa0173760:intron 45.0%
GATGAGATACTGGTATGGGT+GGG - chr1_4:59116912-59116931 Msa0173760:intron 45.0%
ACTGTGAAGCCTTTGATCTC+AGG - chr1_4:59117109-59117128 Msa0173760:CDS 45.0%
CTGTGAAGCCTTTGATCTCA+GGG - chr1_4:59117110-59117129 Msa0173760:CDS 45.0%
TAATCTCAGGCTTGTGCCTT+GGG + chr1_4:59117300-59117319 None:intergenic 45.0%
TTAATCTCAGGCTTGTGCCT+TGG + chr1_4:59117301-59117320 None:intergenic 45.0%
TCTTAAGCAGTCGTCTGAAG+TGG - chr1_4:59117838-59117857 Msa0173760:CDS 45.0%
GCTGTAAGATTGCACAAGCA+AGG + chr1_4:59118020-59118039 None:intergenic 45.0%
CAGTGACAAATGAATCCTGG+AGG + chr1_4:59118042-59118061 None:intergenic 45.0%
AACCTCCTCCTAGTAAGACA+TGG - chr1_4:59118218-59118237 Msa0173760:CDS 45.0%
TTCCATGTCTTACTAGGAGG+AGG + chr1_4:59118223-59118242 None:intergenic 45.0%
TCCTCCTAGTAAGACATGGA+AGG - chr1_4:59118222-59118241 Msa0173760:CDS 45.0%
ACCTTCCATGTCTTACTAGG+AGG + chr1_4:59118226-59118245 None:intergenic 45.0%
ATTGCCAAACTGGGATGTAC+TGG - chr1_4:59118626-59118645 Msa0173760:intron 45.0%
CATTCCAGTACATCCCAGTT+TGG + chr1_4:59118633-59118652 None:intergenic 45.0%
!! CGGATGCAAGAGTATTCTCT+GGG + chr1_4:59118677-59118696 None:intergenic 45.0%
! AAATACTGAGTTGGCTGAGG+AGG - chr1_4:59119099-59119118 Msa0173760:intron 45.0%
ATTAACTGAGCTGGAAGCAG+AGG - chr1_4:59119159-59119178 Msa0173760:CDS 45.0%
CAATGACTTCATCTTGGGCT+GGG + chr1_4:59119327-59119346 None:intergenic 45.0%
CGCAGCAATGACTTCATCTT+GGG + chr1_4:59119332-59119351 None:intergenic 45.0%
TGCGCTGAGAAATGCATTTC+TGG - chr1_4:59119348-59119367 Msa0173760:intron 45.0%
AAATCTTCACGGAGGAAGAG+AGG - chr1_4:59119389-59119408 Msa0173760:intron 45.0%
!! GCTGGTGGACTAATTGTAGT+GGG - chr1_4:59119504-59119523 Msa0173760:intron 45.0%
ATCACGGCGAATTGACAATC+AGG - chr1_4:59119542-59119561 Msa0173760:intron 45.0%
TTCGACCCAACAAGGAAATG+GGG + chr1_4:59119582-59119601 None:intergenic 45.0%
CTTTCGACCCAACAAGGAAA+TGG + chr1_4:59119584-59119603 None:intergenic 45.0%
TTTCCTTGTTGGGTCGAAAG+AGG - chr1_4:59119584-59119603 Msa0173760:intron 45.0%
! AAAAAGAAGCGTGAGCTTCC+TGG + chr1_4:59119777-59119796 None:intergenic 45.0%
! ATTTGGTGGAGACCGAATTC+AGG - chr1_4:59119824-59119843 Msa0173760:intron 45.0%
GAGACCGAATTCAGGTAATG+TGG - chr1_4:59119832-59119851 Msa0173760:intron 45.0%
! TATGGTCTTGCTACTGCATC+TGG - chr1_4:59119856-59119875 Msa0173760:intron 45.0%
! ATGGTCTTGCTACTGCATCT+GGG - chr1_4:59119857-59119876 Msa0173760:intron 45.0%
! ACATCTGGGACTCAATAGGT+AGG + chr1_4:59119960-59119979 None:intergenic 45.0%
! GTCAACATCTGGGACTCAAT+AGG + chr1_4:59119964-59119983 None:intergenic 45.0%
CTGTATAAACCCGGTCTCTT+TGG + chr1_4:59120077-59120096 None:intergenic 45.0%
! TGGAGCATCAGAACCAATGT+TGG + chr1_4:59120265-59120284 None:intergenic 45.0%
TGATGCTCCAAAAGACAGCT+GGG - chr1_4:59120275-59120294 Msa0173760:intron 45.0%
! TCAAGATCCCAGCTGTCTTT+TGG + chr1_4:59120285-59120304 None:intergenic 45.0%
TCATAGTTGAAGAGGCTGGT+TGG + chr1_4:59120445-59120464 None:intergenic 45.0%
! CAACTGGCTCATAGTTGAAG+AGG + chr1_4:59120453-59120472 None:intergenic 45.0%
GAGAACTAGTGCCAGTTTCA+TGG - chr1_4:59120563-59120582 Msa0173760:intron 45.0%
CTCATTCCTCAGCAAATCAG+GGG + chr1_4:59120885-59120904 None:intergenic 45.0%
CACTCATTCCTCAGCAAATC+AGG + chr1_4:59120887-59120906 None:intergenic 45.0%
TTTGCTGAGGAATGAGTGTC+CGG - chr1_4:59120889-59120908 Msa0173760:intron 45.0%
GAATGAGTGTCCGGATTATG+AGG - chr1_4:59120898-59120917 Msa0173760:intron 45.0%
GCAGCATTTGTAGTCATGCA+AGG + chr1_4:59121329-59121348 None:intergenic 45.0%
TATTACGGAGCAACAAGCAC+CGG - chr1_4:59121356-59121375 Msa0173760:intron 45.0%
ACCGGGTTTGATGAAAGAAG+CGG - chr1_4:59121374-59121393 Msa0173760:intron 45.0%
TCCGCTTCTTTCATCAAACC+CGG + chr1_4:59121378-59121397 None:intergenic 45.0%
GTTTGATGAAAGAAGCGGAG+CGG - chr1_4:59121379-59121398 Msa0173760:intron 45.0%
! TGAGGGCTACAACCTTTTCT+TGG - chr1_4:59121524-59121543 Msa0173760:intron 45.0%
GTGCCATCATCTCCAAGAAA+AGG + chr1_4:59121539-59121558 None:intergenic 45.0%
GATGCATACGATACCCCAAT+TGG - chr1_4:59121660-59121679 Msa0173760:intron 45.0%
TGATCTTGCTTTAGCAGCAC+GGG + chr1_4:59121731-59121750 None:intergenic 45.0%
CTGATCTTGCTTTAGCAGCA+CGG + chr1_4:59121732-59121751 None:intergenic 45.0%
GATACCAATCCAGATCCAGT+TGG - chr1_4:59121803-59121822 Msa0173760:CDS 45.0%
TGTACCAACTGGATCTGGAT+TGG + chr1_4:59121810-59121829 None:intergenic 45.0%
TCAACTGTACCAACTGGATC+TGG + chr1_4:59121815-59121834 None:intergenic 45.0%
! AGTTCTGCAAGAGGTAGTGG+TGG - chr1_4:59116014-59116033 Msa0173760:CDS 50.0%
TCAGGGCTACTAGAGGGAAA+TGG - chr1_4:59116193-59116212 Msa0173760:intron 50.0%
GAAATGGCGTGCAGTTGTTG+TGG - chr1_4:59116209-59116228 Msa0173760:intron 50.0%
TAGCACAGAGTGGTCGTCTT+GGG - chr1_4:59116601-59116620 Msa0173760:intron 50.0%
AGGTTTAGTGTGAGTAGGCG+AGG - chr1_4:59116876-59116895 Msa0173760:intron 50.0%
TTAGTGTGAGTAGGCGAGGA+TGG - chr1_4:59116880-59116899 Msa0173760:intron 50.0%
TTGTATGCATGTCTGCGCAC+AGG + chr1_4:59116987-59117006 None:intergenic 50.0%
GAAGCCACTCTCTTTCTCCA+TGG + chr1_4:59117026-59117045 None:intergenic 50.0%
TAGGAGTCTCCTCTATGGCT+GGG + chr1_4:59117276-59117295 None:intergenic 50.0%
ATAGGAGTCTCCTCTATGGC+TGG + chr1_4:59117277-59117296 None:intergenic 50.0%
TGGGATAGGAGTCTCCTCTA+TGG + chr1_4:59117281-59117300 None:intergenic 50.0%
TAGAGGAGACTCCTATCCCA+AGG - chr1_4:59117281-59117300 Msa0173760:CDS 50.0%
CGAGGACAGGAGAGAGAAAA+GGG + chr1_4:59117372-59117391 None:intergenic 50.0%
TCGAGGACAGGAGAGAGAAA+AGG + chr1_4:59117373-59117392 None:intergenic 50.0%
CTACTCACTAACTCGAGGAC+AGG + chr1_4:59117385-59117404 None:intergenic 50.0%
TGTGCAATCTTACAGCCTCC+AGG - chr1_4:59118024-59118043 Msa0173760:CDS 50.0%
!! GCGGATGCAAGAGTATTCTC+TGG + chr1_4:59118678-59118697 None:intergenic 50.0%
CGTTGTTCAAGGAGAAGCCT+GGG + chr1_4:59118764-59118783 None:intergenic 50.0%
CCAGGCTTCTCCTTGAACAA+CGG - chr1_4:59118762-59118781 Msa0173760:intron 50.0%
GGGGAGCAGATCTGGAAATA+TGG - chr1_4:59118872-59118891 Msa0173760:intron 50.0%
GCAATGACTTCATCTTGGGC+TGG + chr1_4:59119328-59119347 None:intergenic 50.0%
GCGCAGCAATGACTTCATCT+TGG + chr1_4:59119333-59119352 None:intergenic 50.0%
!!! AGCATTTTGACTGCAGGTCG+TGG - chr1_4:59119479-59119498 Msa0173760:intron 50.0%
!!! ATTTTGACTGCAGGTCGTGG+CGG - chr1_4:59119482-59119501 Msa0173760:intron 50.0%
!! GGCTGGTGGACTAATTGTAG+TGG - chr1_4:59119503-59119522 Msa0173760:intron 50.0%
! TGGAAGGGAAGGAGTGTGAA+GGG + chr1_4:59119663-59119682 None:intergenic 50.0%
CTGATGCTCCAAAAGACAGC+TGG - chr1_4:59120274-59120293 Msa0173760:intron 50.0%
TGGCTCATAGTTGAAGAGGC+TGG + chr1_4:59120449-59120468 None:intergenic 50.0%
GGCCTATTTGGTAGACAGCA+AGG + chr1_4:59120499-59120518 None:intergenic 50.0%
!! ATCTGACCCCTGATTTGCTG+AGG - chr1_4:59120876-59120895 Msa0173760:intron 50.0%
GTCCGGATTATGAGGGATTG+CGG - chr1_4:59120906-59120925 Msa0173760:intron 50.0%
CTCCGCAATCCCTCATAATC+CGG + chr1_4:59120911-59120930 None:intergenic 50.0%
ATTACGGAGCAACAAGCACC+GGG - chr1_4:59121357-59121376 Msa0173760:intron 50.0%
TGAGCAATATCGATCGGCTG+TGG - chr1_4:59121412-59121431 Msa0173760:intron 50.0%
AGCAAGCTGTGGGTTTACGA+GGG - chr1_4:59121466-59121485 Msa0173760:intron 50.0%
! GTTTACGAGGGTATGCGCAA+CGG - chr1_4:59121478-59121497 Msa0173760:intron 50.0%
! TTTACGAGGGTATGCGCAAC+GGG - chr1_4:59121479-59121498 Msa0173760:intron 50.0%
AAGGATAAGAGGGACACCAC+AGG + chr1_4:59121624-59121643 None:intergenic 50.0%
! CGTGCTGCTAAAGCAAGATC+AGG - chr1_4:59121730-59121749 Msa0173760:intron 50.0%
GTAAACGGAATGCACGCACT+CGG - chr1_4:59121777-59121796 Msa0173760:CDS 50.0%
GATGGCTCAACTGTACCAAC+TGG + chr1_4:59121821-59121840 None:intergenic 50.0%
TCGTGCCAACAAGCACAGGT+CGG + chr1_4:59116260-59116279 None:intergenic 55.0%
CTAGTCGTGCCAACAAGCAC+AGG + chr1_4:59116264-59116283 None:intergenic 55.0%
GTAGCACAGAGTGGTCGTCT+TGG - chr1_4:59116600-59116619 Msa0173760:intron 55.0%
AGCACAGAGTGGTCGTCTTG+GGG - chr1_4:59116602-59116621 Msa0173760:intron 55.0%
! CAATATGGCTGGCCGTGGAA+CGG - chr1_4:59116641-59116660 Msa0173760:intron 55.0%
! ACTGGTATGGGTGGGTTTCG+TGG - chr1_4:59116920-59116939 Msa0173760:intron 55.0%
! CTGGTATGGGTGGGTTTCGT+GGG - chr1_4:59116921-59116940 Msa0173760:intron 55.0%
GCAGAAGTTCCCAGCCATAG+AGG - chr1_4:59117264-59117283 Msa0173760:CDS 55.0%
TCAGGCTTGTGCCTTGGGAT+AGG + chr1_4:59117295-59117314 None:intergenic 55.0%
CAACGTGGCTAGGGTCACAT+AGG + chr1_4:59117337-59117356 None:intergenic 55.0%
CATTCTGCTGGAGGGCAACA+AGG + chr1_4:59117742-59117761 None:intergenic 55.0%
CCGTTGTTCAAGGAGAAGCC+TGG + chr1_4:59118765-59118784 None:intergenic 55.0%
CACGGAGGAAGAGAGGAAGA+AGG - chr1_4:59119396-59119415 Msa0173760:intron 55.0%
CCTCCTCTTTCGACCCAACA+AGG + chr1_4:59119590-59119609 None:intergenic 55.0%
CCTTGTTGGGTCGAAAGAGG+AGG - chr1_4:59119587-59119606 Msa0173760:intron 55.0%
TGGGTCGAAAGAGGAGGACA+TGG - chr1_4:59119593-59119612 Msa0173760:intron 55.0%
GGGTCGAAAGAGGAGGACAT+GGG - chr1_4:59119594-59119613 Msa0173760:intron 55.0%
GAAAGAGGAGGACATGGGAC+TGG - chr1_4:59119599-59119618 Msa0173760:intron 55.0%
CATGGGACTGGAATAGCCTG+TGG - chr1_4:59119611-59119630 Msa0173760:intron 55.0%
! CTGGAAGGGAAGGAGTGTGA+AGG + chr1_4:59119664-59119683 None:intergenic 55.0%
AGTGGCAGACAAGGAGATCC+AGG - chr1_4:59119756-59119775 Msa0173760:intron 55.0%
!! AGAGGCTGGTTGGCTTGTCA+AGG + chr1_4:59120435-59120454 None:intergenic 55.0%
CGGAGCTATCTTCGTCTTCG+CGG - chr1_4:59120926-59120945 Msa0173760:intron 55.0%
CAGCAAGCTGTGGGTTTACG+AGG - chr1_4:59121465-59121484 Msa0173760:intron 55.0%
ACTGGCCGACCTGTGCTTGT+TGG - chr1_4:59116252-59116271 Msa0173760:intron 60.0%
GGAAGCTGGAATCCCGCATG+AGG - chr1_4:59116320-59116339 Msa0173760:intron 60.0%
TCCACGGCCAGCCATATTGG+TGG + chr1_4:59116640-59116659 None:intergenic 60.0%
CGTTCCACGGCCAGCCATAT+TGG + chr1_4:59116643-59116662 None:intergenic 60.0%
CAGGGACTAAACCTGCGTCC+TGG + chr1_4:59117501-59117520 None:intergenic 60.0%
GGTGAAAGGGGGAGCAGATC+TGG - chr1_4:59118864-59118883 Msa0173760:intron 60.0%
ACTGGAATAGCCTGTGGCCC+TGG - chr1_4:59119617-59119636 Msa0173760:intron 60.0%
CTGAAGCTGCGTGGTCGAAG+TGG - chr1_4:59119738-59119757 Msa0173760:intron 60.0%
CGTGGTCGAAGTGGCAGACA+AGG - chr1_4:59119747-59119766 Msa0173760:intron 60.0%
! GCCACCAATATGGCTGGCCG+TGG - chr1_4:59116636-59116655 Msa0173760:intron 65.0%
GGCTGAGGAGGCCGTGCAAT+TGG - chr1_4:59119111-59119130 Msa0173760:intron 65.0%
GTGCAAGTTGCCAGGGCCAC+AGG + chr1_4:59119630-59119649 None:intergenic 65.0%
TGACTGCAGGTCGTGGCGGC+TGG - chr1_4:59119486-59119505 Msa0173760:intron 70.0%
CTGCAGGTCGTGGCGGCTGG+TGG - chr1_4:59119489-59119508 Msa0173760:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 59115534 59121859 59115534 ID=Msa0173760;Name=Msa0173760
chr1_4 mRNA 59115534 59121859 59115534 ID=Msa0173760-mRNA-1;Parent=Msa0173760;Name=Msa0173760-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|14|0|622
chr1_4 exon 59121746 59121859 59121746 ID=Msa0173760-mRNA-1:exon:18525;Parent=Msa0173760-mRNA-1
chr1_4 exon 59121532 59121645 59121532 ID=Msa0173760-mRNA-1:exon:18524;Parent=Msa0173760-mRNA-1
chr1_4 exon 59121052 59121219 59121052 ID=Msa0173760-mRNA-1:exon:18523;Parent=Msa0173760-mRNA-1
chr1_4 exon 59120663 59120838 59120663 ID=Msa0173760-mRNA-1:exon:18522;Parent=Msa0173760-mRNA-1
chr1_4 exon 59119150 59119216 59119150 ID=Msa0173760-mRNA-1:exon:18521;Parent=Msa0173760-mRNA-1
chr1_4 exon 59118186 59118332 59118186 ID=Msa0173760-mRNA-1:exon:18520;Parent=Msa0173760-mRNA-1
chr1_4 exon 59117976 59118071 59117976 ID=Msa0173760-mRNA-1:exon:18519;Parent=Msa0173760-mRNA-1
chr1_4 exon 59117830 59117898 59117830 ID=Msa0173760-mRNA-1:exon:18518;Parent=Msa0173760-mRNA-1
chr1_4 exon 59117548 59117649 59117548 ID=Msa0173760-mRNA-1:exon:18517;Parent=Msa0173760-mRNA-1
chr1_4 exon 59117214 59117465 59117214 ID=Msa0173760-mRNA-1:exon:18516;Parent=Msa0173760-mRNA-1
chr1_4 exon 59117065 59117132 59117065 ID=Msa0173760-mRNA-1:exon:18515;Parent=Msa0173760-mRNA-1
chr1_4 exon 59116420 59116537 59116420 ID=Msa0173760-mRNA-1:exon:18514;Parent=Msa0173760-mRNA-1
chr1_4 exon 59115800 59116039 59115800 ID=Msa0173760-mRNA-1:exon:18513;Parent=Msa0173760-mRNA-1
chr1_4 exon 59115534 59115671 59115534 ID=Msa0173760-mRNA-1:exon:18512;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59121746 59121859 59121746 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59121532 59121645 59121532 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59121052 59121219 59121052 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59120663 59120838 59120663 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59119150 59119216 59119150 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59118186 59118332 59118186 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59117976 59118071 59117976 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59117830 59117898 59117830 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59117548 59117649 59117548 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59117214 59117465 59117214 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59117065 59117132 59117065 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59116420 59116537 59116420 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59115800 59116039 59115800 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
chr1_4 CDS 59115534 59115671 59115534 ID=Msa0173760-mRNA-1:cds;Parent=Msa0173760-mRNA-1
Gene Sequence

>Msa0173760

GGGAGAAGGTGGAGTGATGGACTCCATCAAGCAGTTGAAGCAAAGGAAGGGTTGCCCATCCAAAATGAAACTGTGACACTGGCTTCTATTAGTTACCAGAATTTCTTTCTGCAGTTCCCAAAACTATGTGGCATGACTGGCACTGCATCAACAGAAATCACAGAATTTGAAAGCATTTACAAGCTTAAAGTTACAATCGTGCCTACAAACAAACCTATGATAAGAAAGGATGAATCTGATGTAGTTTTCAGGGCTACTAGAGGGAAATGGCGTGCAGTTGTTGTGGAAATCTCTAGAATGCACAAAACTGGCCGACCTGTGCTTGTTGGCACGACTAGCGTTGAGCAGAGTGATTCTTTGTCTGAGCAATTGAAGGAAGCTGGAATCCCGCATGAGGTTCTTAATGCAAAACCAGAAAATGTTGAGAGGGAAGCAGAAATTGTAGCACAGAGTGGTCGTCTTGGGGCTGTGACAATTGCCACCAATATGGCTGGCCGTGGAACGGATATAATCCTTGGCGGTAATGCTGAATTTATGGCACGGTTGAAGCTTCGTGAGATACTGATGCCAAGAGTTGTTAAGCTAACTGAAGGAGATTTTGTATCGGTAAAGAAACCTCCTCCTAGTAAGACATGGAAGGTGAATGACAAGTTGTTTCCATGCCAACTATCAAATAAAAATACTGAGTTGGCTGAGGAGGCCGTGCAATTGGCTGTTAAAGCATGGGGAAAGAGATCATTAACTGAGCTGGAAGCAGAGGAGCGCCTATCATATTCCTGTGAAAAGGGCCCAGCCCAAGATGAAGTCATTGCTGCGCTGAGAAATGCATTTCTGGAAATCAGCAAGGAATATAAAATCTTCACGGAGGAAGAGAGGAAGAAGGTCGTGGCGGCTGGTGGACTAATTGTAGTGGGTACCGAGCGTCATGAATCACGGCGAATTGACAATCAGCTGCGTGGTCGAAGTGGCAGACAAGGAGATCCAGGAAGCTCACGCTTCTTTTTAAGTCTTGAAGATAATATTTTTCGGATATTTGGTGGAGACCGAATTCAGGGCTTAATGAAAGCTTTCAGAGTGGAAGACCTACCTATTGAGTCCCAGATGTTGACCAAAGCATTAGATGAAGCCCAAAAGAAAGTGGAGAACTATTTCTTTGACATTCGGAAGCAATTGTTTGAGTATGACGAAGTACTTAATAGCCAAAGAGACCGGGTTTATACAGAGAGAAGACGAGCCCTTCAATCTGACAATCTTCAGTCTCTTCTTATTGAATATGCTGAATTGACAATAGATGACATTTTAGAGGCCAACATTGGTTCTGATGCTCCAAAAGACAGCTGGGATCTTGATAAACTGATTGCAAAAATCCAGCAATATTGCTACTTGTTGAATGATCTGACCCCTGATTTGCTGAGGAATGAGTGTCCGGATTATGAGGGATTGCGGAGCTATCTTCGTCTTCGCGGTAAAGAAGCCTATCTGCAAAAAAGGGATATTACGGAGCAACAAGCACCGGGTTTGATGAAAGAAGCGGAGCGGTTCCTGATCTTGAGCAATATCGATCGGCTGTGGAAAGAACATCTGCAAGCACTAAAATTTGTTCAGCAAGCTGTGGGTTTACGAGGGTATGCGCAACGGGATCCACTTATCGAATATAAACTTGAGGGCTACAACCTTTTCTTGGAGATGATGGCACAAATAAGAAGAAATGTTATATATTCCATATATCAGTTTAAACCCGTGCTGCTAAAGCAAGATCAGGATAAAGCTGAGAATCAGAAATCAGGTAAACGGAATGCACGCACTCGGACTGATACCAATCCAGATCCAGTTGGTACAGTTGAGCCATCAACAAGTGCTAGTTCATGA

Protein sequence

>Msa0173760

GRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTASTEITEFESIYKLKVTIVPTNKPMIRKDESDVVFRATRGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEFMARLKLREILMPRVVKLTEGDFVSVKKPPPSKTWKVNDKLFPCQLSNKNTELAEEAVQLAVKAWGKRSLTELEAEERLSYSCEKGPAQDEVIAALRNAFLEISKEYKIFTEEERKKVVAAGGLIVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMKAFRVEDLPIESQMLTKALDEAQKKVENYFFDIRKQLFEYDEVLNSQRDRVYTERRRALQSDNLQSLLIEYAELTIDDILEANIGSDAPKDSWDLDKLIAKIQQYCYLLNDLTPDLLRNECPDYEGLRSYLRLRGKEAYLQKRDITEQQAPGLMKEAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNVIYSIYQFKPVLLKQDQDKAENQKSGKRNARTRTDTNPDPVGTVEPSTSASS*