Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085870 | sp|Q9M9H4|PD338_ARATH | 57.661 | 496 | 164 | 10 | 26 | 509 | 37 | 498 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085870 | A0A072VPA0 | 94.912 | 511 | 25 | 1 | 1 | 510 | 1 | 511 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017120 | Msa0085870 | 0.800740 | 1.250506e-48 | -8.615850e-47 |
| Msa0020630 | Msa0085870 | 0.832141 | 1.119835e-55 | -8.615850e-47 |
| Msa0027540 | Msa0085870 | 0.808569 | 2.904215e-50 | -8.615850e-47 |
| Msa0030730 | Msa0085870 | 0.810740 | 9.917603e-51 | -8.615850e-47 |
| Msa0037820 | Msa0085870 | 0.827403 | 1.594905e-54 | -8.615850e-47 |
| Msa0038350 | Msa0085870 | -0.833478 | 5.211412e-56 | -8.615850e-47 |
| Msa0040550 | Msa0085870 | -0.803831 | 2.888821e-49 | -8.615850e-47 |
| Msa0050720 | Msa0085870 | 0.808292 | 3.327211e-50 | -8.615850e-47 |
| Msa0050770 | Msa0085870 | 0.825793 | 3.862593e-54 | -8.615850e-47 |
| Msa0070740 | Msa0085870 | 0.828302 | 9.693660e-55 | -8.615850e-47 |
| Msa0075310 | Msa0085870 | 0.813745 | 2.190576e-51 | -8.615850e-47 |
| Msa0084630 | Msa0085870 | 0.826470 | 2.664899e-54 | -8.615850e-47 |
| Msa0084680 | Msa0085870 | 0.827321 | 1.668831e-54 | -8.615850e-47 |
| Msa0085870 | Msa0091770 | 0.827423 | 1.577491e-54 | -8.615850e-47 |
| Msa0085870 | Msa0106120 | -0.812260 | 4.635434e-51 | -8.615850e-47 |
| Msa0085870 | Msa0114250 | 0.817691 | 2.892429e-52 | -8.615850e-47 |
| Msa0085870 | Msa0125230 | 0.806732 | 7.131832e-50 | -8.615850e-47 |
| Msa0085870 | Msa0130800 | 0.840973 | 6.295021e-58 | -8.615850e-47 |
| Msa0085870 | Msa0141550 | 0.806259 | 8.973896e-50 | -8.615850e-47 |
| Msa0085870 | Msa0143980 | 0.804765 | 1.846384e-49 | -8.615850e-47 |
| Msa0085870 | Msa0147990 | 0.813629 | 2.323108e-51 | -8.615850e-47 |
| Msa0085870 | Msa0149500 | 0.840180 | 1.015343e-57 | -8.615850e-47 |
| Msa0085870 | Msa0159750 | 0.833357 | 5.587242e-56 | -8.615850e-47 |
| Msa0085870 | Msa0160000 | 0.809558 | 1.782806e-50 | -8.615850e-47 |
| Msa0085870 | Msa0168100 | 0.804255 | 2.358149e-49 | -8.615850e-47 |
| Msa0085870 | Msa0172370 | 0.808679 | 2.750975e-50 | -8.615850e-47 |
| Msa0085870 | Msa0173760 | 0.810000 | 1.432815e-50 | -8.615850e-47 |
| Msa0085870 | Msa0175530 | 0.806800 | 6.897656e-50 | -8.615850e-47 |
| Msa0085870 | Msa0176710 | 0.801064 | 1.073979e-48 | -8.615850e-47 |
| Msa0085870 | Msa0181020 | 0.810524 | 1.104219e-50 | -8.615850e-47 |
| Msa0085870 | Msa0183610 | 0.811367 | 7.253538e-51 | -8.615850e-47 |
| Msa0085870 | Msa0185390 | 0.801870 | 7.341976e-49 | -8.615850e-47 |
| Msa0085870 | Msa0185640 | -0.801500 | 8.742874e-49 | -8.615850e-47 |
| Msa0085870 | Msa0204030 | 0.810498 | 1.118962e-50 | -8.615850e-47 |
| Msa0085870 | Msa0206940 | 0.840480 | 8.475606e-58 | -8.615850e-47 |
| Msa0085870 | Msa0207000 | 0.807317 | 5.361243e-50 | -8.615850e-47 |
| Msa0085870 | Msa0258380 | 0.817086 | 3.957483e-52 | -8.615850e-47 |
| Msa0085870 | Msa0265980 | -0.801610 | 8.302084e-49 | -8.615850e-47 |
| Msa0085870 | Msa0269360 | 0.820487 | 6.682140e-53 | -8.615850e-47 |
| Msa0085870 | Msa0272420 | 0.819789 | 9.655685e-53 | -8.615850e-47 |
| Msa0085870 | Msa0282860 | 0.826345 | 2.855074e-54 | -8.615850e-47 |
| Msa0085870 | Msa0288330 | 0.829400 | 5.257946e-55 | -8.615850e-47 |
| Msa0085870 | Msa0296610 | 0.817981 | 2.486619e-52 | -8.615850e-47 |
| Msa0085870 | Msa0298940 | 0.835679 | 1.458223e-56 | -8.615850e-47 |
| Msa0085870 | Msa0298970 | 0.833474 | 5.224627e-56 | -8.615850e-47 |
| Msa0085870 | Msa0304000 | 0.800206 | 1.607047e-48 | -8.615850e-47 |
| Msa0085870 | Msa0323630 | 0.815386 | 9.495379e-52 | -8.615850e-47 |
| Msa0085870 | Msa0323990 | 0.804948 | 1.690547e-49 | -8.615850e-47 |
| Msa0085870 | Msa0325470 | 0.818604 | 1.797480e-52 | -8.615850e-47 |
| Msa0085870 | Msa0326670 | 0.806686 | 7.293175e-50 | -8.615850e-47 |
| Msa0085870 | Msa0327860 | 0.823073 | 1.685613e-53 | -8.615850e-47 |
| Msa0085870 | Msa0334980 | 0.806999 | 6.261195e-50 | -8.615850e-47 |
| Msa0085870 | Msa0340550 | 0.802725 | 4.895290e-49 | -8.615850e-47 |
| Msa0085870 | Msa0342200 | 0.822218 | 2.664963e-53 | -8.615850e-47 |
| Msa0085870 | Msa0350020 | 0.855396 | 6.488332e-62 | -8.615850e-47 |
| Msa0085870 | Msa0351980 | 0.808486 | 3.025444e-50 | -8.615850e-47 |
| Msa0085870 | Msa0352200 | 0.838900 | 2.184153e-57 | -8.615850e-47 |
| Msa0085870 | Msa0367370 | 0.829553 | 4.826290e-55 | -8.615850e-47 |
| Msa0085870 | Msa0382500 | 0.804030 | 2.626382e-49 | -8.615850e-47 |
| Msa0085870 | Msa0399720 | 0.826103 | 3.259194e-54 | -8.615850e-47 |
| Msa0085870 | Msa0406740 | 0.803595 | 3.235008e-49 | -8.615850e-47 |
| Msa0085870 | Msa0411560 | 0.850100 | 2.112733e-60 | -8.615850e-47 |
| Msa0085870 | Msa0413740 | 0.838647 | 2.540394e-57 | -8.615850e-47 |
| Msa0085870 | Msa0418000 | 0.837006 | 6.702353e-57 | -8.615850e-47 |
| Msa0085870 | Msa0423600 | 0.803234 | 3.842307e-49 | -8.615850e-47 |
| Msa0085870 | Msa0427090 | 0.807181 | 5.730904e-50 | -8.615850e-47 |
| Msa0085870 | Msa0432680 | 0.810286 | 1.242877e-50 | -8.615850e-47 |
| Msa0085870 | Msa0440110 | 0.805258 | 1.455859e-49 | -8.615850e-47 |
| Msa0085870 | Msa0450460 | 0.811196 | 7.902500e-51 | -8.615850e-47 |
| Msa0085870 | Msa0458790 | 0.816643 | 4.974007e-52 | -8.615850e-47 |
| Msa0085870 | Msa0473490 | 0.824843 | 6.478609e-54 | -8.615850e-47 |
| Msa0085870 | Msa0475740 | 0.806173 | 9.356469e-50 | -8.615850e-47 |
| Msa0085870 | Msa0486530 | 0.849927 | 2.360776e-60 | -8.615850e-47 |
| Msa0085870 | Msa0505390 | 0.837362 | 5.437169e-57 | -8.615850e-47 |
| Msa0085870 | Msa0516450 | 0.806076 | 9.805925e-50 | -8.615850e-47 |
| Msa0085870 | Msa0518160 | 0.805111 | 1.562630e-49 | -8.615850e-47 |
| Msa0085870 | Msa0524050 | 0.850260 | 1.904621e-60 | -8.615850e-47 |
| Msa0085870 | Msa0524120 | 0.800745 | 1.248009e-48 | -8.615850e-47 |
| Msa0085870 | Msa0526640 | -0.823086 | 1.673588e-53 | -8.615850e-47 |
| Msa0085870 | Msa0530930 | 0.838234 | 3.245078e-57 | -8.615850e-47 |
| Msa0085870 | Msa0534380 | 0.800729 | 1.257275e-48 | -8.615850e-47 |
| Msa0085870 | Msa0539320 | 0.812715 | 3.687951e-51 | -8.615850e-47 |
| Msa0085870 | Msa0542010 | 0.808784 | 2.612782e-50 | -8.615850e-47 |
| Msa0085870 | Msa0546380 | 0.819284 | 1.259091e-52 | -8.615850e-47 |
| Msa0085870 | Msa0563140 | 0.817287 | 3.565218e-52 | -8.615850e-47 |
| Msa0085870 | Msa0574170 | 0.822912 | 1.837428e-53 | -8.615850e-47 |
| Msa0085870 | Msa0576420 | 0.813779 | 2.153024e-51 | -8.615850e-47 |
| Msa0085870 | Msa0577230 | 0.805230 | 1.475680e-49 | -8.615850e-47 |
| Msa0085870 | Msa0583930 | 0.815295 | 9.945448e-52 | -8.615850e-47 |
| Msa0085870 | Msa0589290 | 0.819679 | 1.023323e-52 | -8.615850e-47 |
| Msa0085870 | Msa0589600 | 0.814330 | 1.627401e-51 | -8.615850e-47 |
| Msa0085870 | Msa0589640 | 0.833058 | 6.630909e-56 | -8.615850e-47 |
| Msa0085870 | Msa0591780 | 0.810678 | 1.022887e-50 | -8.615850e-47 |
| Msa0085870 | Msa0598250 | 0.825643 | 4.191547e-54 | -8.615850e-47 |
| Msa0085870 | Msa0600820 | 0.823512 | 1.330884e-53 | -8.615850e-47 |
| Msa0085870 | Msa0604700 | 0.838099 | 3.515807e-57 | -8.615850e-47 |
| Msa0085870 | Msa0605620 | 0.807611 | 4.644596e-50 | -8.615850e-47 |
| Msa0085870 | Msa0607300 | 0.802735 | 4.871232e-49 | -8.615850e-47 |
| Msa0085870 | Msa0619330 | 0.814549 | 1.456111e-51 | -8.615850e-47 |
| Msa0085870 | Msa0621890 | 0.821503 | 3.900718e-53 | -8.615850e-47 |
| Msa0085870 | Msa0629500 | 0.817295 | 3.551984e-52 | -8.615850e-47 |
| Msa0085870 | Msa0635130 | 0.806562 | 7.744969e-50 | -8.615850e-47 |
| Msa0085870 | Msa0645820 | 0.807324 | 5.344946e-50 | -8.615850e-47 |
| Msa0085870 | Msa0647000 | 0.804420 | 2.179027e-49 | -8.615850e-47 |
| Msa0085870 | Msa0650360 | 0.812820 | 3.497324e-51 | -8.615850e-47 |
| Msa0085870 | Msa0660880 | -0.801602 | 8.331765e-49 | -8.615850e-47 |
| Msa0085870 | Msa0677820 | 0.814757 | 1.309281e-51 | -8.615850e-47 |
| Msa0085870 | Msa0685540 | 0.821812 | 3.309480e-53 | -8.615850e-47 |
| Msa0085870 | Msa0690350 | 0.815844 | 7.505356e-52 | -8.615850e-47 |
| Msa0085870 | Msa0707780 | 0.807306 | 5.389951e-50 | -8.615850e-47 |
| Msa0085870 | Msa0730180 | 0.802816 | 4.689214e-49 | -8.615850e-47 |
| Msa0085870 | Msa0733000 | 0.810846 | 9.408243e-51 | -8.615850e-47 |
| Msa0085870 | Msa0736710 | -0.808381 | 3.184803e-50 | -8.615850e-47 |
| Msa0085870 | Msa0740420 | 0.802957 | 4.383887e-49 | -8.615850e-47 |
| Msa0085870 | Msa0750380 | 0.811715 | 6.093384e-51 | -8.615850e-47 |
| Msa0085870 | Msa0760890 | 0.817747 | 2.808464e-52 | -8.615850e-47 |
| Msa0085870 | Msa0770430 | 0.815940 | 7.146769e-52 | -8.615850e-47 |
| Msa0085870 | Msa0780140 | 0.824074 | 9.827221e-54 | -8.615850e-47 |
| Msa0085870 | Msa0811510 | 0.817546 | 3.117317e-52 | -8.615850e-47 |
| Msa0085870 | Msa0815750 | -0.809118 | 2.216000e-50 | -8.615850e-47 |
| Msa0085870 | Msa0820670 | 0.817699 | 2.880277e-52 | -8.615850e-47 |
| Msa0085870 | Msa0824140 | 0.814945 | 1.189693e-51 | -8.615850e-47 |
| Msa0085870 | Msa0828570 | 0.815078 | 1.111459e-51 | -8.615850e-47 |
| Msa0085870 | Msa0829570 | 0.801578 | 8.429677e-49 | -8.615850e-47 |
| Msa0085870 | Msa0830720 | 0.809671 | 1.686019e-50 | -8.615850e-47 |
| Msa0085870 | Msa0846640 | 0.803148 | 4.002948e-49 | -8.615850e-47 |
| Msa0085870 | Msa0848360 | 0.801093 | 1.059429e-48 | -8.615850e-47 |
| Msa0085870 | Msa0851740 | 0.815447 | 9.200784e-52 | -8.615850e-47 |
| Msa0085870 | Msa0863250 | 0.830268 | 3.231140e-55 | -8.615850e-47 |
| Msa0085870 | Msa0873830 | 0.808364 | 3.211824e-50 | -8.615850e-47 |
| Msa0085870 | Msa0890250 | 0.806473 | 8.088457e-50 | -8.615850e-47 |
| Msa0085870 | Msa0909710 | 0.855138 | 7.713981e-62 | -8.615850e-47 |
| Msa0085870 | Msa0925160 | 0.822425 | 2.385011e-53 | -8.615850e-47 |
| Msa0085870 | Msa0929400 | 0.844835 | 5.910340e-59 | -8.615850e-47 |
| Msa0085870 | Msa0934830 | 0.803121 | 4.054933e-49 | -8.615850e-47 |
| Msa0085870 | Msa0937940 | 0.855977 | 4.392366e-62 | -8.615850e-47 |
| Msa0085870 | Msa0951720 | 0.802108 | 6.558885e-49 | -8.615850e-47 |
| Msa0085870 | Msa0955260 | 0.827190 | 1.793835e-54 | -8.615850e-47 |
| Msa0085870 | Msa0970050 | 0.855191 | 7.446984e-62 | -8.615850e-47 |
| Msa0085870 | Msa0975080 | 0.847069 | 1.459989e-59 | -8.615850e-47 |
| Msa0085870 | Msa0980440 | 0.832772 | 7.812583e-56 | -8.615850e-47 |
| Msa0085870 | Msa0981740 | 0.811042 | 8.534215e-51 | -8.615850e-47 |
| Msa0085870 | Msa1001780 | 0.801313 | 9.549949e-49 | -8.615850e-47 |
| Msa0085870 | Msa1014350 | 0.809375 | 1.952241e-50 | -8.615850e-47 |
| Msa0085870 | Msa1016670 | 0.800302 | 1.535759e-48 | -8.615850e-47 |
| Msa0085870 | Msa1029320 | 0.802224 | 6.210165e-49 | -8.615850e-47 |
| Msa0085870 | Msa1029430 | 0.824075 | 9.821266e-54 | -8.615850e-47 |
| Msa0085870 | Msa1032350 | 0.821337 | 4.261048e-53 | -8.615850e-47 |
| Msa0085870 | Msa1038050 | 0.817478 | 3.229397e-52 | -8.615850e-47 |
| Msa0085870 | Msa1038320 | 0.854128 | 1.512531e-61 | -8.615850e-47 |
| Msa0085870 | Msa1054890 | 0.822408 | 2.407344e-53 | -8.615850e-47 |
| Msa0085870 | Msa1064210 | 0.823376 | 1.431722e-53 | -8.615850e-47 |
| Msa0085870 | Msa1072350 | 0.805291 | 1.432768e-49 | -8.615850e-47 |
| Msa0085870 | Msa1076680 | 0.802167 | 6.380293e-49 | -8.615850e-47 |
| Msa0085870 | Msa1080460 | 0.814159 | 1.775394e-51 | -8.615850e-47 |
| Msa0085870 | Msa1081700 | 0.830500 | 2.835703e-55 | -8.615850e-47 |
| Msa0085870 | Msa1102170 | 0.810293 | 1.238758e-50 | -8.615850e-47 |
| Msa0085870 | Msa1106560 | 0.817880 | 2.621284e-52 | -8.615850e-47 |
| Msa0085870 | Msa1115580 | 0.808877 | 2.495870e-50 | -8.615850e-47 |
| Msa0085870 | Msa1122510 | 0.816025 | 6.838990e-52 | -8.615850e-47 |
| Msa0085870 | Msa1125780 | 0.813968 | 1.956262e-51 | -8.615850e-47 |
| Msa0085870 | Msa1125950 | 0.811607 | 6.433062e-51 | -8.615850e-47 |
| Msa0085870 | Msa1130650 | 0.848216 | 7.059979e-60 | -8.615850e-47 |
| Msa0085870 | Msa1130730 | 0.821219 | 4.536334e-53 | -8.615850e-47 |
| Msa0085870 | Msa1133660 | 0.806680 | 7.312451e-50 | -8.615850e-47 |
| Msa0085870 | Msa1140010 | 0.809042 | 2.300443e-50 | -8.615850e-47 |
| Msa0085870 | Msa1146150 | 0.817297 | 3.547437e-52 | -8.615850e-47 |
| Msa0085870 | Msa1151960 | 0.805325 | 1.409836e-49 | -8.615850e-47 |
| Msa0085870 | Msa1161760 | 0.812163 | 4.867539e-51 | -8.615850e-47 |
| Msa0085870 | Msa1171340 | 0.809570 | 1.772979e-50 | -8.615850e-47 |
| Msa0085870 | Msa1183390 | 0.801097 | 1.057542e-48 | -8.615850e-47 |
| Msa0085870 | Msa1184730 | 0.847521 | 1.097246e-59 | -8.615850e-47 |
| Msa0085870 | Msa1190910 | 0.815229 | 1.028695e-51 | -8.615850e-47 |
| Msa0085870 | Msa1191390 | 0.800578 | 1.349813e-48 | -8.615850e-47 |
| Msa0085870 | Msa1194300 | 0.800061 | 1.719735e-48 | -8.615850e-47 |
| Msa0085870 | Msa1194330 | 0.803137 | 4.024012e-49 | -8.615850e-47 |
| Msa0085870 | Msa1201990 | 0.816522 | 5.296976e-52 | -8.615850e-47 |
| Msa0085870 | Msa1210640 | 0.801439 | 8.998557e-49 | -8.615850e-47 |
| Msa0085870 | Msa1222580 | 0.804753 | 1.857039e-49 | -8.615850e-47 |
| Msa0085870 | Msa1223460 | 0.829002 | 6.568706e-55 | -8.615850e-47 |
| Msa0085870 | Msa1226600 | 0.806340 | 8.628090e-50 | -8.615850e-47 |
| Msa0085870 | Msa1233770 | 0.842201 | 2.987648e-58 | -8.615850e-47 |
| Msa0085870 | Msa1238480 | 0.804479 | 2.117975e-49 | -8.615850e-47 |
| Msa0085870 | Msa1238700 | 0.833696 | 4.597785e-56 | -8.615850e-47 |
| Msa0085870 | Msa1254770 | 0.800097 | 1.691211e-48 | -8.615850e-47 |
| Msa0085870 | Msa1262310 | 0.842246 | 2.906372e-58 | -8.615850e-47 |
| Msa0085870 | Msa1264560 | 0.861506 | 9.782543e-64 | -8.615850e-47 |
| Msa0085870 | Msa1265820 | -0.802029 | 6.810698e-49 | -8.615850e-47 |
| Msa0085870 | Msa1265960 | 0.820897 | 5.379435e-53 | -8.615850e-47 |
| Msa0085870 | Msa1276080 | 0.832322 | 1.009891e-55 | -8.615850e-47 |
| Msa0085870 | Msa1296960 | -0.804621 | 1.978326e-49 | -8.615850e-47 |
| Msa0085870 | Msa1299160 | 0.807589 | 4.694057e-50 | -8.615850e-47 |
| Msa0085870 | Msa1302150 | 0.808221 | 3.444843e-50 | -8.615850e-47 |
| Msa0085870 | Msa1305520 | 0.849777 | 2.601334e-60 | -8.615850e-47 |
| Msa0085870 | Msa1309360 | 0.806411 | 8.335129e-50 | -8.615850e-47 |
| Msa0085870 | Msa1310110 | 0.816332 | 5.839753e-52 | -8.615850e-47 |
| Msa0085870 | Msa1316720 | 0.813699 | 2.242238e-51 | -8.615850e-47 |
| Msa0085870 | Msa1317710 | 0.804371 | 2.230423e-49 | -8.615850e-47 |
| Msa0085870 | Msa1326000 | 0.861298 | 1.131633e-63 | -8.615850e-47 |
| Msa0085870 | Msa1329990 | 0.829933 | 3.901075e-55 | -8.615850e-47 |
| Msa0085870 | Msa1335970 | -0.813665 | 2.281954e-51 | -8.615850e-47 |
| Msa0085870 | Msa1341790 | 0.803345 | 3.643947e-49 | -8.615850e-47 |
| Msa0085870 | Msa1347290 | 0.811737 | 6.028146e-51 | -8.615850e-47 |
| Msa0085870 | Msa1355260 | 0.810517 | 1.108280e-50 | -8.615850e-47 |
| Msa0085870 | Msa1365120 | 0.844684 | 6.489097e-59 | -8.615850e-47 |
| Msa0085870 | Msa1380720 | 0.811576 | 6.533210e-51 | -8.615850e-47 |
| Msa0085870 | Msa1385620 | 0.822851 | 1.898501e-53 | -8.615850e-47 |
| Msa0085870 | Msa1386020 | 0.823599 | 1.270257e-53 | -8.615850e-47 |
| Msa0085870 | Msa1407710 | 0.823091 | 1.669264e-53 | -8.615850e-47 |
| Msa0085870 | Msa1412520 | 0.837275 | 5.721944e-57 | -8.615850e-47 |
| Msa0085870 | Msa1418200 | 0.849253 | 3.641908e-60 | -8.615850e-47 |
| Msa0085870 | Msa1428440 | 0.826624 | 2.449092e-54 | -8.615850e-47 |
| Msa0085870 | Msa1430760 | 0.810293 | 1.238995e-50 | -8.615850e-47 |
| Msa0085870 | Msa1431000 | 0.815551 | 8.722846e-52 | -8.615850e-47 |
| Msa0085870 | Msa1435040 | 0.812508 | 4.092172e-51 | -8.615850e-47 |
| Msa0085870 | Msa1438270 | 0.811568 | 6.560037e-51 | -8.615850e-47 |
| Msa0085870 | Msa1440180 | 0.804620 | 1.978925e-49 | -8.615850e-47 |
| Msa0085870 | Msa1440610 | 0.810574 | 1.077485e-50 | -8.615850e-47 |
| Msa0085870 | Msa1449740 | 0.805299 | 1.427191e-49 | -8.615850e-47 |
| Msa0085870 | Msa1464560 | 0.823230 | 1.548786e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085870 | MtrunA17_Chr1g0201261 | 94.912 | 511 | 25 | 1 | 1 | 510 | 1 | 511 | 0.0 | 943 |
| Msa0085870 | MtrunA17_Chr2g0293821 | 32.683 | 205 | 130 | 5 | 274 | 475 | 158 | 357 | 2.05e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085870 | AT1G71720.1 | 57.661 | 496 | 164 | 10 | 26 | 509 | 37 | 498 | 0.0 | 535 |
| Msa0085870 | AT1G71720.2 | 58.118 | 425 | 136 | 7 | 26 | 441 | 37 | 428 | 6.07e-159 | 459 |
| Msa0085870 | AT5G30510.1 | 33.659 | 205 | 127 | 5 | 274 | 475 | 165 | 363 | 3.01e-26 | 111 |
Find 119 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTGGTGTTGTTGTTTC+AGG | 0.170222 | 1_2:+66198179 | Msa0085870:CDS |
| GGCCATACAGAGAGTATTTA+TGG | 0.204207 | 1_2:+66201613 | Msa0085870:intron |
| CCTATTGTCTCTACAAAATT+AGG | 0.227064 | 1_2:+66201680 | Msa0085870:CDS |
| CATTGTTCTCTTATGTTGTT+TGG | 0.231036 | 1_2:+66201943 | Msa0085870:three_prime_UTR |
| ACATCATTTAACGACTTAAA+AGG | 0.260605 | 1_2:-66202225 | None:intergenic |
| CTATAATATGACACCTAAAA+TGG | 0.279673 | 1_2:-66202090 | None:intergenic |
| AGGAGTGGAAAGAACAATAT+TGG | 0.289687 | 1_2:-66197754 | None:intergenic |
| GAACAAGCCGTCACCTGTTT+TGG | 0.299137 | 1_2:+66197917 | Msa0085870:CDS |
| ACTGAACAAAGCATTATCTT+TGG | 0.305171 | 1_2:-66197614 | None:intergenic |
| AGCATGGGCTATAAAGTATT+TGG | 0.307708 | 1_2:+66201976 | Msa0085870:three_prime_UTR |
| GACCATTGATTTCTACTAGA+AGG | 0.314430 | 1_2:+66198465 | Msa0085870:CDS |
| GTTTCTACAACAGGCCTTCC+TGG | 0.339830 | 1_2:-66198395 | None:intergenic |
| GCCTTCTGAAGAGGAAGCTT+TGG | 0.354245 | 1_2:+66197962 | Msa0085870:CDS |
| GATAGTGCAAGACGCTTCTC+TGG | 0.356013 | 1_2:-66202178 | None:intergenic |
| TCCTTTGAATGGTAAAGAAA+TGG | 0.358874 | 1_2:+66198271 | Msa0085870:CDS |
| GGAAGGCCTGTTGTAGAAAC+TGG | 0.360206 | 1_2:+66198398 | Msa0085870:CDS |
| ATCTTAATTTGTGCTCCATA+TGG | 0.366503 | 1_2:-66200009 | None:intergenic |
| ACAACAAAATCACCAGGTTT+TGG | 0.371047 | 1_2:-66198161 | None:intergenic |
| TCTTGTCACAAGCTCAGCTT+TGG | 0.373548 | 1_2:-66199578 | None:intergenic |
| GGCTCTTTCGCCGGATTGCT+TGG | 0.380436 | 1_2:+66198486 | Msa0085870:CDS |
| ATTGTTCTCTTATGTTGTTT+GGG | 0.380653 | 1_2:+66201944 | Msa0085870:three_prime_UTR |
| TAAAACCTCAGCAAACAAAA+TGG | 0.381979 | 1_2:-66198423 | None:intergenic |
| TATAGATAGATTCATATAGT+TGG | 0.389674 | 1_2:+66202108 | Msa0085870:three_prime_UTR |
| ATGAAGCACTTTATGCAAAC+TGG | 0.389809 | 1_2:+66201735 | Msa0085870:CDS |
| AACTTGAATTTCATCATCAA+TGG | 0.393250 | 1_2:-66197886 | None:intergenic |
| TCCATCTCAACTTCCAAAAC+AGG | 0.419736 | 1_2:-66197930 | None:intergenic |
| CACTTTATGCAAACTGGAAG+TGG | 0.420539 | 1_2:+66201741 | Msa0085870:CDS |
| AAGGAAGTGCTTCCTTTGAA+TGG | 0.425729 | 1_2:+66198260 | Msa0085870:CDS |
| TATGGAGCACAAATTAAGAT+TGG | 0.430199 | 1_2:+66200012 | Msa0085870:CDS |
| AAATTCCAGGTTCACTTTCA+AGG | 0.434312 | 1_2:-66201497 | None:intergenic |
| ATGGTTCCAGTTTCTACAAC+AGG | 0.436694 | 1_2:-66198404 | None:intergenic |
| CTTCATATGTTCTTCTCAAA+CGG | 0.440969 | 1_2:-66201880 | None:intergenic |
| GGAGTGGAAAGAACAATATT+GGG | 0.445067 | 1_2:-66197753 | None:intergenic |
| AAAAGAAGGAGAAGATAAGA+AGG | 0.446272 | 1_2:+66198118 | Msa0085870:CDS |
| AGATAATGAGGTATTAGAAC+TGG | 0.450849 | 1_2:+66198040 | Msa0085870:CDS |
| TGCTTGGCATCGAGTGAGGC+AGG | 0.461627 | 1_2:+66198502 | Msa0085870:CDS |
| GGATGTAGTTGAAGAATAGA+TGG | 0.465996 | 1_2:-66197654 | None:intergenic |
| AGAATTACAGAGTGGAATAC+TGG | 0.466743 | 1_2:+66199432 | Msa0085870:CDS |
| CTCCGTTGATGAGAAGGTTA+AGG | 0.469591 | 1_2:+66201116 | Msa0085870:CDS |
| AGGCAAAGCACTAGTTGGTA+AGG | 0.471914 | 1_2:-66201705 | None:intergenic |
| TGCTTAGTGAAAAGCAAGCT+TGG | 0.472021 | 1_2:+66199802 | Msa0085870:CDS |
| GAGGTTTCAAGTGATTTAGC+TGG | 0.476222 | 1_2:+66197858 | Msa0085870:CDS |
| CTCAAACGGCATGCCCGTCA+TGG | 0.478904 | 1_2:-66201866 | None:intergenic |
| ATTGTTCTTTCCACTCCTCA+TGG | 0.483191 | 1_2:+66197759 | Msa0085870:CDS |
| ACGTGATTACAATTACATCT+TGG | 0.483342 | 1_2:-66202308 | None:intergenic |
| ATGAGTGGAGTGTCAGTGCC+AGG | 0.486152 | 1_2:+66198377 | Msa0085870:CDS |
| TAAAGTGCTTCATCTTCATA+AGG | 0.486317 | 1_2:-66201725 | None:intergenic |
| TTTACGGTTCAAGGGAAGAT+GGG | 0.487575 | 1_2:+66198332 | Msa0085870:CDS |
| ATTCAAAGGAAGCACTTCCT+TGG | 0.487899 | 1_2:-66198258 | None:intergenic |
| CTACTAGAAGGCTCTTTCGC+CGG | 0.487934 | 1_2:+66198477 | Msa0085870:CDS |
| TGATTTCTTGCTGAAAATGA+AGG | 0.488495 | 1_2:-66197709 | None:intergenic |
| CGGCATGCCCGTCATGGGAC+TGG | 0.488635 | 1_2:-66201860 | None:intergenic |
| GGAGTTGCAGTTGAAGCATA+AGG | 0.494734 | 1_2:-66197688 | None:intergenic |
| GCTTAGTGAAAAGCAAGCTT+GGG | 0.496512 | 1_2:+66199803 | Msa0085870:CDS |
| CTTGTCACAAGCTCAGCTTT+GGG | 0.498895 | 1_2:-66199577 | None:intergenic |
| AGGTTTCAAGTGATTTAGCT+GGG | 0.506029 | 1_2:+66197859 | Msa0085870:CDS |
| CTGGTGAGCCATGCAACATA+AGG | 0.507604 | 1_2:-66201841 | None:intergenic |
| ATTTATGGAGGCTGATATGA+TGG | 0.513840 | 1_2:+66201628 | Msa0085870:CDS |
| TCACTCGATGCCAAGCAATC+CGG | 0.517829 | 1_2:-66198496 | None:intergenic |
| TCCAGGTTCACTTTCAAGGT+CGG | 0.518644 | 1_2:-66201493 | None:intergenic |
| TCAAACGGCATGCCCGTCAT+GGG | 0.523959 | 1_2:-66201865 | None:intergenic |
| TCCATTTCTTTACCATTCAA+AGG | 0.525558 | 1_2:-66198272 | None:intergenic |
| TCATAAGGCAAAGCACTAGT+TGG | 0.527975 | 1_2:-66201710 | None:intergenic |
| GCCGACCTTGAAAGTGAACC+TGG | 0.527984 | 1_2:+66201492 | Msa0085870:CDS |
| AATCTCACCACTCGAGGTCG+AGG | 0.529081 | 1_2:-66201908 | None:intergenic |
| AGACCTCAATCGTTGTTAGC+AGG | 0.530608 | 1_2:-66199458 | None:intergenic |
| CGTACTCTCCGTTGATGAGA+AGG | 0.532205 | 1_2:+66201110 | Msa0085870:CDS |
| TGGCTCACCAGTCCCATGAC+GGG | 0.532514 | 1_2:+66201853 | Msa0085870:three_prime_UTR |
| AACAAGCTTGATGTAAATGT+TGG | 0.533528 | 1_2:+66198209 | Msa0085870:CDS |
| GTTTGGGCACATAAAGAGCA+TGG | 0.540106 | 1_2:+66201960 | Msa0085870:three_prime_UTR |
| GCCAAAGCTTCCTCTTCAGA+AGG | 0.545333 | 1_2:-66197963 | None:intergenic |
| AATAAGAAAGAAATTTAAAG+AGG | 0.547637 | 1_2:-66202039 | None:intergenic |
| TCAGAGAACCTTATGTTGCA+TGG | 0.549152 | 1_2:+66201833 | Msa0085870:three_prime_UTR |
| AATGTTGGAGCAGATTTACT+AGG | 0.550877 | 1_2:+66198224 | Msa0085870:CDS |
| TTTGTAGAGACAATAGGAGG+AGG | 0.554599 | 1_2:-66201674 | None:intergenic |
| GAATAGATGGCATCTTTGTA+TGG | 0.555083 | 1_2:-66197641 | None:intergenic |
| TCTGTAATTCTAACCTCGAT+AGG | 0.555447 | 1_2:-66199420 | None:intergenic |
| TAGTAAAGATTATGTGAAGG+AGG | 0.556511 | 1_2:+66198010 | Msa0085870:CDS |
| TTTAGAGCAAAACTTGAAGT+GGG | 0.556785 | 1_2:-66197820 | None:intergenic |
| GGAGGTTGACGAAGATAATG+AGG | 0.568457 | 1_2:+66198028 | Msa0085870:CDS |
| AGCCTTCTAGTAGAAATCAA+TGG | 0.568978 | 1_2:-66198467 | None:intergenic |
| TAATATGACACCTAAAATGG+AGG | 0.574715 | 1_2:-66202087 | None:intergenic |
| AATATGACACCTAAAATGGA+GGG | 0.575844 | 1_2:-66202086 | None:intergenic |
| ACAAGAGAAGCCTTCTGAAG+AGG | 0.577741 | 1_2:+66197953 | Msa0085870:CDS |
| TCACAAGCTCAGCTTTGGGT+AGG | 0.577775 | 1_2:-66199573 | None:intergenic |
| ATAGTTGGATGTAAATTCTG+AGG | 0.578855 | 1_2:+66202123 | Msa0085870:three_prime_UTR |
| AACAATTGAACCATGAGGAG+TGG | 0.579544 | 1_2:-66197769 | None:intergenic |
| ATGGCTCACCAGTCCCATGA+CGG | 0.589592 | 1_2:+66201852 | Msa0085870:three_prime_UTR |
| TTTGGGCACATAAAGAGCAT+GGG | 0.592315 | 1_2:+66201961 | Msa0085870:three_prime_UTR |
| ATGTGATGTGAACAAGGATG+TGG | 0.593676 | 1_2:+66198304 | Msa0085870:CDS |
| GAAAAGGCATATCTTCGTGA+AGG | 0.597129 | 1_2:+66199952 | Msa0085870:CDS |
| CGGCCTGCTAACAACGATTG+AGG | 0.597746 | 1_2:+66199455 | Msa0085870:CDS |
| ATAGTGCAAGACGCTTCTCT+GGG | 0.598814 | 1_2:-66202177 | None:intergenic |
| TCAACTTCCAAAACAGGTGA+CGG | 0.599928 | 1_2:-66197924 | None:intergenic |
| GAGTACTATGAGCCAAAACC+TGG | 0.601150 | 1_2:+66198149 | Msa0085870:CDS |
| AGCCTTAACCTTCTCATCAA+CGG | 0.602910 | 1_2:-66201118 | None:intergenic |
| GGATTGCTTGGCATCGAGTG+AGG | 0.607582 | 1_2:+66198498 | Msa0085870:CDS |
| AGGTAGTAAAGATTATGTGA+AGG | 0.610501 | 1_2:+66198007 | Msa0085870:CDS |
| GGCAAAGCACTAGTTGGTAA+GGG | 0.614969 | 1_2:-66201704 | None:intergenic |
| AGAGCCTCCTCGACCTCGAG+TGG | 0.617540 | 1_2:+66201901 | Msa0085870:three_prime_UTR |
| GTGGAGTGTCAGTGCCAGGA+AGG | 0.618214 | 1_2:+66198381 | Msa0085870:CDS |
| AGGTTAAGGCTCTTGTTGTG+AGG | 0.619077 | 1_2:+66201130 | Msa0085870:CDS |
| TAGTTGGATGTAAATTCTGA+GGG | 0.623285 | 1_2:+66202124 | Msa0085870:three_prime_UTR |
| CTCACCACTCGAGGTCGAGG+AGG | 0.631825 | 1_2:-66201905 | None:intergenic |
| AAGCATAAGGAAGAATTACA+AGG | 0.632192 | 1_2:-66197675 | None:intergenic |
| ATATGACACCTAAAATGGAG+GGG | 0.632609 | 1_2:-66202085 | None:intergenic |
| AAAAGGCATATCTTCGTGAA+GGG | 0.634782 | 1_2:+66199953 | Msa0085870:CDS |
| TTTGTTATGTGATGTGAACA+AGG | 0.648082 | 1_2:+66198298 | Msa0085870:CDS |
| ACTAGGTACAATGTTAACCA+AGG | 0.652350 | 1_2:+66198241 | Msa0085870:CDS |
| TTAGAAACAATTGAACCATG+AGG | 0.654840 | 1_2:-66197774 | None:intergenic |
| AAGAATGATGAAGTAATGAG+TGG | 0.659184 | 1_2:+66198362 | Msa0085870:CDS |
| ACACCAACAACAAAATCACC+AGG | 0.669393 | 1_2:-66198167 | None:intergenic |
| ACAGCTCAATGAACCTATCG+AGG | 0.680086 | 1_2:+66199407 | Msa0085870:CDS |
| AAAAGATGGTGTGAGTGATG+AGG | 0.692251 | 1_2:+66198076 | Msa0085870:CDS |
| CATACAGAGAGTATTTATGG+AGG | 0.694319 | 1_2:+66201616 | Msa0085870:intron |
| TCCCCGATAAAATCTCTCTG+AGG | 0.706627 | 1_2:+66201160 | Msa0085870:CDS |
| ATTACAGAGTGGAATACTGG+CGG | 0.713190 | 1_2:+66199435 | Msa0085870:CDS |
| GGTTTCAAGTGATTTAGCTG+GGG | 0.714323 | 1_2:+66197860 | Msa0085870:CDS |
| TCGAGGTTAGAATTACAGAG+TGG | 0.742925 | 1_2:+66199424 | Msa0085870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCGATATTATAAATTA+AGG | + | chr1_2:66199111-66199130 | Msa0085870:intron | 10.0% |
| !! | TTAACAATTAAAATTTATGA+AGG | - | chr1_2:66200969-66200988 | None:intergenic | 10.0% |
| !!! | AAATTGAGTTATATTTTCAA+GGG | - | chr1_2:66200083-66200102 | None:intergenic | 15.0% |
| !!! | AAGATTAATGTTTTAAAAAC+CGG | + | chr1_2:66200433-66200452 | Msa0085870:intron | 15.0% |
| !!! | AATTTTTCTTTCAAATAAAG+AGG | + | chr1_2:66201515-66201534 | Msa0085870:CDS | 15.0% |
| !!! | TTGAATTCTTATTCATTTTT+CGG | + | chr1_2:66201592-66201611 | Msa0085870:intron | 15.0% |
| !! | AATAAGAAAGAAATTTAAAG+AGG | - | chr1_2:66202042-66202061 | None:intergenic | 15.0% |
| !!! | CCTTTGAAAAACTTAAAAAA+AGG | - | chr1_2:66197990-66198009 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTAAGTTTTTCAA+AGG | + | chr1_2:66197987-66198006 | Msa0085870:CDS | 20.0% |
| !!! | TATTTAGCAAATAGTAGTTT+TGG | + | chr1_2:66198656-66198675 | Msa0085870:intron | 20.0% |
| !! | TAATAAATGGAGAACAAATA+TGG | - | chr1_2:66198697-66198716 | None:intergenic | 20.0% |
| !! | TTAAATAAGTTAATCCAAAC+AGG | + | chr1_2:66198989-66199008 | Msa0085870:intron | 20.0% |
| !!! | TTTGTCATTTCATATCAAAA+TGG | + | chr1_2:66199188-66199207 | Msa0085870:intron | 20.0% |
| !! | ACACTGAAATTTAGTAAAAA+AGG | + | chr1_2:66199238-66199257 | Msa0085870:intron | 20.0% |
| !!! | AATCTGATCTTTTTAATGTT+TGG | + | chr1_2:66199374-66199393 | Msa0085870:intron | 20.0% |
| !!! | ATCTGATCTTTTTAATGTTT+GGG | + | chr1_2:66199375-66199394 | Msa0085870:intron | 20.0% |
| !!! | GTAAAAAAGATTTTTCCATA+TGG | + | chr1_2:66199994-66200013 | Msa0085870:CDS | 20.0% |
| !!! | CAAATTGAGTTATATTTTCA+AGG | - | chr1_2:66200084-66200103 | None:intergenic | 20.0% |
| !!! | TCAATTTGAGTTATTTTCAA+TGG | + | chr1_2:66200096-66200115 | Msa0085870:intron | 20.0% |
| !! | ATATAGATAATGAATGCATT+AGG | + | chr1_2:66200129-66200148 | Msa0085870:intron | 20.0% |
| !! | TTATTTGAAAGAAAAATTCC+AGG | - | chr1_2:66201513-66201532 | None:intergenic | 20.0% |
| !! | TATAGATAGATTCATATAGT+TGG | + | chr1_2:66202108-66202127 | Msa0085870:three_prime_UTR | 20.0% |
| !!! | TTAAATTTTGAACTTTCACA+GGG | - | chr1_2:66202287-66202306 | None:intergenic | 20.0% |
| !!! | ATTAAATTTTGAACTTTCAC+AGG | - | chr1_2:66202288-66202307 | None:intergenic | 20.0% |
| !! | ATATCAAAAATTTCAGTGAA+TGG | - | chr1_2:66202334-66202353 | None:intergenic | 20.0% |
| !!! | TTCAAGTTTTGCTCTAAAAA+TGG | + | chr1_2:66197825-66197844 | Msa0085870:CDS | 25.0% |
| ! | AACTTGAATTTCATCATCAA+TGG | - | chr1_2:66197889-66197908 | None:intergenic | 25.0% |
| ! | AAAGAAGATGAAGAAAAAGA+AGG | + | chr1_2:66198104-66198123 | Msa0085870:CDS | 25.0% |
| ! | AACATTGGATATGAGTAAAA+AGG | - | chr1_2:66198547-66198566 | None:intergenic | 25.0% |
| ! | ACATCTACTAAACTAAACAT+TGG | - | chr1_2:66198562-66198581 | None:intergenic | 25.0% |
| ! | AAAGATGGAAGATAAAAACT+TGG | - | chr1_2:66198586-66198605 | None:intergenic | 25.0% |
| ! | AATTTGGCATTGCTAATAAA+TGG | - | chr1_2:66198710-66198729 | None:intergenic | 25.0% |
| ! | ATTTATTAGCAATGCCAAAT+TGG | + | chr1_2:66198709-66198728 | Msa0085870:intron | 25.0% |
| ! | AATTAGCTGAAAATAGCTTA+TGG | + | chr1_2:66198899-66198918 | Msa0085870:intron | 25.0% |
| !!! | GATTGAATTGTTTTAGTTTC+TGG | + | chr1_2:66199034-66199053 | Msa0085870:intron | 25.0% |
| ! | TCATTTCATATCAAAATGGT+AGG | + | chr1_2:66199192-66199211 | Msa0085870:intron | 25.0% |
| ! | AGTGAGCATTTATAAGATAA+TGG | - | chr1_2:66199296-66199315 | None:intergenic | 25.0% |
| ! | TAATGACATAAATCTAATGC+TGG | + | chr1_2:66199342-66199361 | Msa0085870:intron | 25.0% |
| !! | TCTGATCTTTTTAATGTTTG+GGG | + | chr1_2:66199376-66199395 | Msa0085870:intron | 25.0% |
| ! | AACATAAACTTCAAGTCAAT+GGG | - | chr1_2:66199486-66199505 | None:intergenic | 25.0% |
| ! | ATTTACTCAAATAATGACAC+AGG | - | chr1_2:66199509-66199528 | None:intergenic | 25.0% |
| !! | TGCTTATTTCTTCATGAATT+CGG | + | chr1_2:66199528-66199547 | Msa0085870:intron | 25.0% |
| ! | AGATGAAGCTAAAAATTCTT+TGG | + | chr1_2:66199779-66199798 | Msa0085870:CDS | 25.0% |
| !!! | TTTCACAATCTTTTGAAGTT+AGG | - | chr1_2:66200189-66200208 | None:intergenic | 25.0% |
| ! | AGATTGTGAAACTTTGAATT+TGG | + | chr1_2:66200198-66200217 | Msa0085870:intron | 25.0% |
| ! | TTAACTCTAACGAAATAAAC+TGG | + | chr1_2:66200241-66200260 | Msa0085870:intron | 25.0% |
| ! | ACTATATAGATAACAATGAC+GGG | - | chr1_2:66200267-66200286 | None:intergenic | 25.0% |
| ! | CACTATATAGATAACAATGA+CGG | - | chr1_2:66200268-66200287 | None:intergenic | 25.0% |
| ! | AAATTACAGCAGCAAATAAA+TGG | - | chr1_2:66200312-66200331 | None:intergenic | 25.0% |
| ! | TTGTAGATAAAAAGCAAGTA+GGG | - | chr1_2:66200673-66200692 | None:intergenic | 25.0% |
| !! | TTATGCCAAATTTCTCATTT+TGG | - | chr1_2:66200723-66200742 | None:intergenic | 25.0% |
| !! | TTGGCATAATTTTATAGCTA+CGG | + | chr1_2:66200734-66200753 | Msa0085870:intron | 25.0% |
| ! | AAGAAAATTATGCAGTAACA+AGG | - | chr1_2:66200803-66200822 | None:intergenic | 25.0% |
| !!! | TACTATCTTTGTTTCTATCA+TGG | + | chr1_2:66200823-66200842 | Msa0085870:intron | 25.0% |
| !! | TAACTTCCTTTTGTAATTGT+TGG | + | chr1_2:66201200-66201219 | Msa0085870:intron | 25.0% |
| !! | AACTTCCTTTTGTAATTGTT+GGG | + | chr1_2:66201201-66201220 | Msa0085870:intron | 25.0% |
| ! | TTGTTTATGTTAACCAAACA+AGG | - | chr1_2:66201254-66201273 | None:intergenic | 25.0% |
| !! | AATCAAATTTTGAATCTTGG+AGG | - | chr1_2:66201340-66201359 | None:intergenic | 25.0% |
| !! | ACGAATCAAATTTTGAATCT+TGG | - | chr1_2:66201343-66201362 | None:intergenic | 25.0% |
| ! | ATCAACAACATGAATATTGT+TGG | - | chr1_2:66201442-66201461 | None:intergenic | 25.0% |
| ! | TCCTATTAAAACTTCTTCTA+TGG | + | chr1_2:66201558-66201577 | Msa0085870:intron | 25.0% |
| !!! | TCCATAGAAGAAGTTTTAAT+AGG | - | chr1_2:66201562-66201581 | None:intergenic | 25.0% |
| !! | ATTGTTCTCTTATGTTGTTT+GGG | + | chr1_2:66201944-66201963 | Msa0085870:three_prime_UTR | 25.0% |
| ! | GAAGAAACTCAACAAAAAAA+TGG | - | chr1_2:66202066-66202085 | None:intergenic | 25.0% |
| ! | CTATAATATGACACCTAAAA+TGG | - | chr1_2:66202093-66202112 | None:intergenic | 25.0% |
| ! | ACATCATTTAACGACTTAAA+AGG | - | chr1_2:66202228-66202247 | None:intergenic | 25.0% |
| ! | ACTGAACAAAGCATTATCTT+TGG | - | chr1_2:66197617-66197636 | None:intergenic | 30.0% |
| AAGCATAAGGAAGAATTACA+AGG | - | chr1_2:66197678-66197697 | None:intergenic | 30.0% | |
| TGATTTCTTGCTGAAAATGA+AGG | - | chr1_2:66197712-66197731 | None:intergenic | 30.0% | |
| TTAGAAACAATTGAACCATG+AGG | - | chr1_2:66197777-66197796 | None:intergenic | 30.0% | |
| ! | TTTAGAGCAAAACTTGAAGT+GGG | - | chr1_2:66197823-66197842 | None:intergenic | 30.0% |
| !!! | TTTTAGAGCAAAACTTGAAG+TGG | - | chr1_2:66197824-66197843 | None:intergenic | 30.0% |
| !!! | AAGTTTTGCTCTAAAAATGG+TGG | + | chr1_2:66197828-66197847 | Msa0085870:CDS | 30.0% |
| !!! | AGTTTTGCTCTAAAAATGGT+GGG | + | chr1_2:66197829-66197848 | Msa0085870:CDS | 30.0% |
| AGGTAGTAAAGATTATGTGA+AGG | + | chr1_2:66198007-66198026 | Msa0085870:CDS | 30.0% | |
| TAGTAAAGATTATGTGAAGG+AGG | + | chr1_2:66198010-66198029 | Msa0085870:CDS | 30.0% | |
| ! | AGATAATGAGGTATTAGAAC+TGG | + | chr1_2:66198040-66198059 | Msa0085870:CDS | 30.0% |
| GAAGTTTCTGAACAAAAAGA+TGG | + | chr1_2:66198062-66198081 | Msa0085870:CDS | 30.0% | |
| AAAAGAAGGAGAAGATAAGA+AGG | + | chr1_2:66198118-66198137 | Msa0085870:CDS | 30.0% | |
| AACAAGCTTGATGTAAATGT+TGG | + | chr1_2:66198209-66198228 | Msa0085870:CDS | 30.0% | |
| TCCTTTGAATGGTAAAGAAA+TGG | + | chr1_2:66198271-66198290 | Msa0085870:CDS | 30.0% | |
| TCCATTTCTTTACCATTCAA+AGG | - | chr1_2:66198275-66198294 | None:intergenic | 30.0% | |
| ! | TTTGTTATGTGATGTGAACA+AGG | + | chr1_2:66198298-66198317 | Msa0085870:CDS | 30.0% |
| AAGAATGATGAAGTAATGAG+TGG | + | chr1_2:66198362-66198381 | Msa0085870:CDS | 30.0% | |
| TAAAACCTCAGCAAACAAAA+TGG | - | chr1_2:66198426-66198445 | None:intergenic | 30.0% | |
| !! | ATTTTGTTTGCTGAGGTTTT+AGG | + | chr1_2:66198425-66198444 | Msa0085870:CDS | 30.0% |
| TTCGACTCACAAATTAAAGA+TGG | - | chr1_2:66198601-66198620 | None:intergenic | 30.0% | |
| ACAAATATGGTCTCATGATT+TGG | - | chr1_2:66198684-66198703 | None:intergenic | 30.0% | |
| GATAAACGTTAATCCAAACA+GGG | - | chr1_2:66198768-66198787 | None:intergenic | 30.0% | |
| TGATAAACGTTAATCCAAAC+AGG | - | chr1_2:66198769-66198788 | None:intergenic | 30.0% | |
| AATTAAGGACTTGAATGACT+TGG | + | chr1_2:66199126-66199145 | Msa0085870:intron | 30.0% | |
| ! | AATGACTTGGAGTATATGTA+TGG | + | chr1_2:66199139-66199158 | Msa0085870:intron | 30.0% |
| GAACATAAACTTCAAGTCAA+TGG | - | chr1_2:66199487-66199506 | None:intergenic | 30.0% | |
| ! | GAAAATGTAAGTTGCAGTTT+TGG | + | chr1_2:66199625-66199644 | Msa0085870:intron | 30.0% |
| GCAAGAAAGTAAGGAAAAAT+AGG | - | chr1_2:66199854-66199873 | None:intergenic | 30.0% | |
| ! | TTTTCCTTACTTTCTTGCAT+CGG | + | chr1_2:66199856-66199875 | Msa0085870:intron | 30.0% |
| !! | ATCTTAATTTGTGCTCCATA+TGG | - | chr1_2:66200012-66200031 | None:intergenic | 30.0% |
| TATGGAGCACAAATTAAGAT+TGG | + | chr1_2:66200012-66200031 | Msa0085870:CDS | 30.0% | |
| AGATTGGAAAAACTAACAGA+AGG | + | chr1_2:66200028-66200047 | Msa0085870:CDS | 30.0% | |
| !! | GAGTTATTTTCAATGGATGA+TGG | + | chr1_2:66200103-66200122 | Msa0085870:intron | 30.0% |
| TTAGGAAAACGTCTATATGT+TGG | - | chr1_2:66200171-66200190 | None:intergenic | 30.0% | |
| TTGTGAAACTTTGAATTTGG+TGG | + | chr1_2:66200201-66200220 | Msa0085870:intron | 30.0% | |
| CGTCATTGTTATCTATATAG+TGG | + | chr1_2:66200266-66200285 | Msa0085870:intron | 30.0% | |
| AACCAATTACATATCCCTAA+GGG | - | chr1_2:66200386-66200405 | None:intergenic | 30.0% | |
| AAACCAATTACATATCCCTA+AGG | - | chr1_2:66200387-66200406 | None:intergenic | 30.0% | |
| TTAGGGATATGTAATTGGTT+TGG | + | chr1_2:66200386-66200405 | Msa0085870:intron | 30.0% | |
| !! | TATGTAATTGGTTTGGTATC+AGG | + | chr1_2:66200393-66200412 | Msa0085870:intron | 30.0% |
| TTGAACCAAACCATACTATT+CGG | - | chr1_2:66200627-66200646 | None:intergenic | 30.0% | |
| !! | AATAGTATGGTTTGGTTCAA+TGG | + | chr1_2:66200627-66200646 | Msa0085870:intron | 30.0% |
| !! | ATAGTATGGTTTGGTTCAAT+GGG | + | chr1_2:66200628-66200647 | Msa0085870:intron | 30.0% |
| GTTGTAGATAAAAAGCAAGT+AGG | - | chr1_2:66200674-66200693 | None:intergenic | 30.0% | |
| TCGATCCAAAATGAGAAATT+TGG | + | chr1_2:66200715-66200734 | Msa0085870:intron | 30.0% | |
| ATAACAACGATAAGGTAGTA+GGG | - | chr1_2:66200875-66200894 | None:intergenic | 30.0% | |
| ! | ACTGCAACTTTTAATCTGTA+AGG | + | chr1_2:66200932-66200951 | Msa0085870:intron | 30.0% |
| CAGCTTGATAAAATATAGAC+AGG | - | chr1_2:66201004-66201023 | None:intergenic | 30.0% | |
| ! | TTACCTCAGAGAGATTTTAT+CGG | - | chr1_2:66201166-66201185 | None:intergenic | 30.0% |
| ATACACCCAACAATTACAAA+AGG | - | chr1_2:66201209-66201228 | None:intergenic | 30.0% | |
| CATAAACAAATGAATGAGTG+AGG | + | chr1_2:66201265-66201284 | Msa0085870:intron | 30.0% | |
| ! | AATTTTGTAGAGACAATAGG+AGG | - | chr1_2:66201680-66201699 | None:intergenic | 30.0% |
| ! | CCTAATTTTGTAGAGACAAT+AGG | - | chr1_2:66201683-66201702 | None:intergenic | 30.0% |
| CCTATTGTCTCTACAAAATT+AGG | + | chr1_2:66201680-66201699 | Msa0085870:CDS | 30.0% | |
| ! | TAAAGTGCTTCATCTTCATA+AGG | - | chr1_2:66201728-66201747 | None:intergenic | 30.0% |
| CTTCATATGTTCTTCTCAAA+CGG | - | chr1_2:66201883-66201902 | None:intergenic | 30.0% | |
| CATTGTTCTCTTATGTTGTT+TGG | + | chr1_2:66201943-66201962 | Msa0085870:three_prime_UTR | 30.0% | |
| AATATGACACCTAAAATGGA+GGG | - | chr1_2:66202089-66202108 | None:intergenic | 30.0% | |
| TAATATGACACCTAAAATGG+AGG | - | chr1_2:66202090-66202109 | None:intergenic | 30.0% | |
| ATAGTTGGATGTAAATTCTG+AGG | + | chr1_2:66202123-66202142 | Msa0085870:three_prime_UTR | 30.0% | |
| TAGTTGGATGTAAATTCTGA+GGG | + | chr1_2:66202124-66202143 | Msa0085870:three_prime_UTR | 30.0% | |
| ACGTGATTACAATTACATCT+TGG | - | chr1_2:66202311-66202330 | None:intergenic | 30.0% | |
| GAATAGATGGCATCTTTGTA+TGG | - | chr1_2:66197644-66197663 | None:intergenic | 35.0% | |
| GGATGTAGTTGAAGAATAGA+TGG | - | chr1_2:66197657-66197676 | None:intergenic | 35.0% | |
| GGAGTGGAAAGAACAATATT+GGG | - | chr1_2:66197756-66197775 | None:intergenic | 35.0% | |
| AGGAGTGGAAAGAACAATAT+TGG | - | chr1_2:66197757-66197776 | None:intergenic | 35.0% | |
| !! | TAAAAATGGTGGGTTTGATG+AGG | + | chr1_2:66197839-66197858 | Msa0085870:CDS | 35.0% |
| ! | AGGTTTCAAGTGATTTAGCT+GGG | + | chr1_2:66197859-66197878 | Msa0085870:CDS | 35.0% |
| ! | ACAACAAAATCACCAGGTTT+TGG | - | chr1_2:66198164-66198183 | None:intergenic | 35.0% |
| !! | AAACCTGGTGATTTTGTTGT+TGG | + | chr1_2:66198164-66198183 | Msa0085870:CDS | 35.0% |
| AATGTTGGAGCAGATTTACT+AGG | + | chr1_2:66198224-66198243 | Msa0085870:CDS | 35.0% | |
| ACTAGGTACAATGTTAACCA+AGG | + | chr1_2:66198241-66198260 | Msa0085870:CDS | 35.0% | |
| ! | CAAGGATGTGGAGAATTTTA+CGG | + | chr1_2:66198316-66198335 | Msa0085870:CDS | 35.0% |
| ! | TGGAGAATTTTACGGTTCAA+GGG | + | chr1_2:66198324-66198343 | Msa0085870:CDS | 35.0% |
| !! | GTTTTAGGTAGAACACTTAG+TGG | + | chr1_2:66198440-66198459 | Msa0085870:CDS | 35.0% |
| !! | GACCATTGATTTCTACTAGA+AGG | + | chr1_2:66198465-66198484 | Msa0085870:CDS | 35.0% |
| AGCCTTCTAGTAGAAATCAA+TGG | - | chr1_2:66198470-66198489 | None:intergenic | 35.0% | |
| ! | TATCCAATTTTTGCCCTGTT+TGG | + | chr1_2:66198752-66198771 | Msa0085870:intron | 35.0% |
| AATCCAAACAGGGCAAAAAT+TGG | - | chr1_2:66198758-66198777 | None:intergenic | 35.0% | |
| CTAATTTCCATAAGCTCTTC+AGG | - | chr1_2:66198885-66198904 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTTAGACTGTTT+GGG | - | chr1_2:66198954-66198973 | None:intergenic | 35.0% |
| ! | TAAGCACTTGTTAGACTGTT+TGG | - | chr1_2:66198955-66198974 | None:intergenic | 35.0% |
| ATGGCTAAAATGTGACTTGA+AGG | + | chr1_2:66199065-66199084 | Msa0085870:intron | 35.0% | |
| !!! | ACAACAGTAGATGTCACTTT+TGG | - | chr1_2:66199169-66199188 | None:intergenic | 35.0% |
| TCTGTAATTCTAACCTCGAT+AGG | - | chr1_2:66199423-66199442 | None:intergenic | 35.0% | |
| AGAATTACAGAGTGGAATAC+TGG | + | chr1_2:66199432-66199451 | Msa0085870:CDS | 35.0% | |
| TTCATGAATTCGGATGTGTA+GGG | + | chr1_2:66199538-66199557 | Msa0085870:intron | 35.0% | |
| CGTATCAGCAAGAGATTATA+AGG | - | chr1_2:66199707-66199726 | None:intergenic | 35.0% | |
| ! | ATACGTGATCATGATGATGT+AGG | + | chr1_2:66199722-66199741 | Msa0085870:intron | 35.0% |
| ! | TGATCATGATGATGTAGGTT+GGG | + | chr1_2:66199727-66199746 | Msa0085870:intron | 35.0% |
| ! | AAAAGGCATATCTTCGTGAA+GGG | + | chr1_2:66199953-66199972 | Msa0085870:CDS | 35.0% |
| ATGAATGCATTAGGTAAGTC+AGG | + | chr1_2:66200138-66200157 | Msa0085870:intron | 35.0% | |
| ACAGCAGCAAATAAATGGAA+AGG | - | chr1_2:66200307-66200326 | None:intergenic | 35.0% | |
| ! | ATAGATTTCAGTAGCCCTTT+TGG | + | chr1_2:66200511-66200530 | Msa0085870:intron | 35.0% |
| TGAACCAAACCATACTATTC+GGG | - | chr1_2:66200626-66200645 | None:intergenic | 35.0% | |
| CATAACAACGATAAGGTAGT+AGG | - | chr1_2:66200876-66200895 | None:intergenic | 35.0% | |
| CTACTACCTTATCGTTGTTA+TGG | + | chr1_2:66200874-66200893 | Msa0085870:intron | 35.0% | |
| TGCATTCCAAATGAACATGT+TGG | + | chr1_2:66201022-66201041 | Msa0085870:intron | 35.0% | |
| AGGAATCCAACATGTTCATT+TGG | - | chr1_2:66201031-66201050 | None:intergenic | 35.0% | |
| ! | TACCTCAGAGAGATTTTATC+GGG | - | chr1_2:66201165-66201184 | None:intergenic | 35.0% |
| TCAAGTCTTTCTGGGTTAAT+TGG | + | chr1_2:66201228-66201247 | Msa0085870:intron | 35.0% | |
| ! | TCTTGGAGGATTTTCATGTT+AGG | - | chr1_2:66201326-66201345 | None:intergenic | 35.0% |
| AAATTCCAGGTTCACTTTCA+AGG | - | chr1_2:66201500-66201519 | None:intergenic | 35.0% | |
| CTCCATAAATACTCTCTGTA+TGG | - | chr1_2:66201618-66201637 | None:intergenic | 35.0% | |
| !! | CATACAGAGAGTATTTATGG+AGG | + | chr1_2:66201616-66201635 | Msa0085870:intron | 35.0% |
| ATTTATGGAGGCTGATATGA+TGG | + | chr1_2:66201628-66201647 | Msa0085870:CDS | 35.0% | |
| ! | ATGAAGCACTTTATGCAAAC+TGG | + | chr1_2:66201735-66201754 | Msa0085870:CDS | 35.0% |
| ! | AGCATGGGCTATAAAGTATT+TGG | + | chr1_2:66201976-66201995 | Msa0085870:three_prime_UTR | 35.0% |
| ATATGACACCTAAAATGGAG+GGG | - | chr1_2:66202088-66202107 | None:intergenic | 35.0% | |
| ATTGTTCTTTCCACTCCTCA+TGG | + | chr1_2:66197759-66197778 | Msa0085870:CDS | 40.0% | |
| AACAATTGAACCATGAGGAG+TGG | - | chr1_2:66197772-66197791 | None:intergenic | 40.0% | |
| ! | GAGGTTTCAAGTGATTTAGC+TGG | + | chr1_2:66197858-66197877 | Msa0085870:CDS | 40.0% |
| ! | GGTTTCAAGTGATTTAGCTG+GGG | + | chr1_2:66197860-66197879 | Msa0085870:CDS | 40.0% |
| TCAACTTCCAAAACAGGTGA+CGG | - | chr1_2:66197927-66197946 | None:intergenic | 40.0% | |
| !!! | ACCTGTTTTGGAAGTTGAGA+TGG | + | chr1_2:66197929-66197948 | Msa0085870:CDS | 40.0% |
| TCCATCTCAACTTCCAAAAC+AGG | - | chr1_2:66197933-66197952 | None:intergenic | 40.0% | |
| AAAAGATGGTGTGAGTGATG+AGG | + | chr1_2:66198076-66198095 | Msa0085870:CDS | 40.0% | |
| ACACCAACAACAAAATCACC+AGG | - | chr1_2:66198170-66198189 | None:intergenic | 40.0% | |
| !! | GTTGTTGGTGTTGTTGTTTC+AGG | + | chr1_2:66198179-66198198 | Msa0085870:CDS | 40.0% |
| !! | ATTCAAAGGAAGCACTTCCT+TGG | - | chr1_2:66198261-66198280 | None:intergenic | 40.0% |
| !! | AAGGAAGTGCTTCCTTTGAA+TGG | + | chr1_2:66198260-66198279 | Msa0085870:CDS | 40.0% |
| ATGTGATGTGAACAAGGATG+TGG | + | chr1_2:66198304-66198323 | Msa0085870:CDS | 40.0% | |
| ! | GTGGAGAATTTTACGGTTCA+AGG | + | chr1_2:66198323-66198342 | Msa0085870:CDS | 40.0% |
| ! | TTTTACGGTTCAAGGGAAGA+TGG | + | chr1_2:66198331-66198350 | Msa0085870:CDS | 40.0% |
| TTTACGGTTCAAGGGAAGAT+GGG | + | chr1_2:66198332-66198351 | Msa0085870:CDS | 40.0% | |
| ATGGTTCCAGTTTCTACAAC+AGG | - | chr1_2:66198407-66198426 | None:intergenic | 40.0% | |
| !! | TGGAACCATTTTGTTTGCTG+AGG | + | chr1_2:66198418-66198437 | Msa0085870:CDS | 40.0% |
| ! | ATGCCAAATTGGCTCTTCAA+TGG | + | chr1_2:66198720-66198739 | Msa0085870:intron | 40.0% |
| TCACCATTGAAGAGCCAATT+TGG | - | chr1_2:66198726-66198745 | None:intergenic | 40.0% | |
| AAGTGATCCTGAAGAGCTTA+TGG | + | chr1_2:66198875-66198894 | Msa0085870:intron | 40.0% | |
| TCTGTCCCTTGAAAGACAAA+GGG | - | chr1_2:66199016-66199035 | None:intergenic | 40.0% | |
| ATCTGTCCCTTGAAAGACAA+AGG | - | chr1_2:66199017-66199036 | None:intergenic | 40.0% | |
| !! | TCACATTTTAGCCATCAAGC+TGG | - | chr1_2:66199060-66199079 | None:intergenic | 40.0% |
| GACTTGGAGTATATGTATGG+AGG | + | chr1_2:66199142-66199161 | Msa0085870:intron | 40.0% | |
| TCGAGGTTAGAATTACAGAG+TGG | + | chr1_2:66199424-66199443 | Msa0085870:CDS | 40.0% | |
| ATTACAGAGTGGAATACTGG+CGG | + | chr1_2:66199435-66199454 | Msa0085870:CDS | 40.0% | |
| CTTCATGAATTCGGATGTGT+AGG | + | chr1_2:66199537-66199556 | Msa0085870:intron | 40.0% | |
| TTGGAACGTTCTTCTTGTCA+AGG | + | chr1_2:66199644-66199663 | Msa0085870:intron | 40.0% | |
| TGGAACGTTCTTCTTGTCAA+GGG | + | chr1_2:66199645-66199664 | Msa0085870:intron | 40.0% | |
| ! | GTGATCATGATGATGTAGGT+TGG | + | chr1_2:66199726-66199745 | Msa0085870:intron | 40.0% |
| TGCTTAGTGAAAAGCAAGCT+TGG | + | chr1_2:66199802-66199821 | Msa0085870:CDS | 40.0% | |
| GCTTAGTGAAAAGCAAGCTT+GGG | + | chr1_2:66199803-66199822 | Msa0085870:CDS | 40.0% | |
| AACACCGATGCAAGAAAGTA+AGG | - | chr1_2:66199863-66199882 | None:intergenic | 40.0% | |
| GTGAAATGACGTACAGGAAA+AGG | + | chr1_2:66199936-66199955 | Msa0085870:intron | 40.0% | |
| ! | GAAAAGGCATATCTTCGTGA+AGG | + | chr1_2:66199952-66199971 | Msa0085870:CDS | 40.0% |
| AATGCATTAGGTAAGTCAGG+CGG | + | chr1_2:66200141-66200160 | Msa0085870:intron | 40.0% | |
| AGCCCTTAGGGATATGTAAT+TGG | + | chr1_2:66200381-66200400 | Msa0085870:intron | 40.0% | |
| ! | CTGACAGGTTTGTTCTATTC+CGG | - | chr1_2:66200455-66200474 | None:intergenic | 40.0% |
| AAATCTATCAGGCACCTAAC+TGG | - | chr1_2:66200499-66200518 | None:intergenic | 40.0% | |
| AAGGGCTACTGAAATCTATC+AGG | - | chr1_2:66200510-66200529 | None:intergenic | 40.0% | |
| !! | TTTCAGTAGCCCTTTTGGTT+TGG | + | chr1_2:66200516-66200535 | Msa0085870:intron | 40.0% |
| TTGAGGATGCCAAACCAAAA+GGG | - | chr1_2:66200528-66200547 | None:intergenic | 40.0% | |
| CTACTATCTCCTATGAGACA+GGG | + | chr1_2:66200589-66200608 | Msa0085870:intron | 40.0% | |
| AAACCATACTATTCGGGATC+GGG | - | chr1_2:66200620-66200639 | None:intergenic | 40.0% | |
| CAAACCATACTATTCGGGAT+CGG | - | chr1_2:66200621-66200640 | None:intergenic | 40.0% | |
| !! | TATGGTTTGGTTCAATGGGA+CGG | + | chr1_2:66200632-66200651 | Msa0085870:intron | 40.0% |
| ATGCAGCCATAACAACGATA+AGG | - | chr1_2:66200883-66200902 | None:intergenic | 40.0% | |
| ! | ATGGCTGCATTGCTGTTAAT+AGG | + | chr1_2:66200893-66200912 | Msa0085870:intron | 40.0% |
| ACATGTTGGATTCCTTTCAG+TGG | + | chr1_2:66201036-66201055 | Msa0085870:intron | 40.0% | |
| CATGTTGGATTCCTTTCAGT+GGG | + | chr1_2:66201037-66201056 | Msa0085870:intron | 40.0% | |
| AGCCTTAACCTTCTCATCAA+CGG | - | chr1_2:66201121-66201140 | None:intergenic | 40.0% | |
| ! | ACCTCAGAGAGATTTTATCG+GGG | - | chr1_2:66201164-66201183 | None:intergenic | 40.0% |
| TTGGGTGTATCAAGTCTTTC+TGG | + | chr1_2:66201219-66201238 | Msa0085870:intron | 40.0% | |
| TGGGTGTATCAAGTCTTTCT+GGG | + | chr1_2:66201220-66201239 | Msa0085870:intron | 40.0% | |
| TCTAAGAACGGTTCTTCTAC+AGG | + | chr1_2:66201375-66201394 | Msa0085870:intron | 40.0% | |
| !! | GGCCATACAGAGAGTATTTA+TGG | + | chr1_2:66201613-66201632 | Msa0085870:intron | 40.0% |
| TTTGTAGAGACAATAGGAGG+AGG | - | chr1_2:66201677-66201696 | None:intergenic | 40.0% | |
| ! | TCATAAGGCAAAGCACTAGT+TGG | - | chr1_2:66201713-66201732 | None:intergenic | 40.0% |
| CACTTTATGCAAACTGGAAG+TGG | + | chr1_2:66201741-66201760 | Msa0085870:CDS | 40.0% | |
| TCAGAGAACCTTATGTTGCA+TGG | + | chr1_2:66201833-66201852 | Msa0085870:three_prime_UTR | 40.0% | |
| TCAAAAAATCTCACCACTCG+AGG | - | chr1_2:66201917-66201936 | None:intergenic | 40.0% | |
| ! | TTTGGGCACATAAAGAGCAT+GGG | + | chr1_2:66201961-66201980 | Msa0085870:three_prime_UTR | 40.0% |
| ! | AGTTTCTTCCCCTCCATTTT+AGG | + | chr1_2:66202077-66202096 | Msa0085870:three_prime_UTR | 40.0% |
| GGAGTTGCAGTTGAAGCATA+AGG | - | chr1_2:66197691-66197710 | None:intergenic | 45.0% | |
| ! | ACAAGAGAAGCCTTCTGAAG+AGG | + | chr1_2:66197953-66197972 | Msa0085870:CDS | 45.0% |
| GGAGGTTGACGAAGATAATG+AGG | + | chr1_2:66198028-66198047 | Msa0085870:CDS | 45.0% | |
| GAGTACTATGAGCCAAAACC+TGG | + | chr1_2:66198149-66198168 | Msa0085870:CDS | 45.0% | |
| CTGTCCCTTGAAAGACAAAG+GGG | - | chr1_2:66199015-66199034 | None:intergenic | 45.0% | |
| !! | TTAGTTTCTGGCCAGCTTGA+TGG | + | chr1_2:66199046-66199065 | Msa0085870:intron | 45.0% |
| ACAGCTCAATGAACCTATCG+AGG | + | chr1_2:66199407-66199426 | Msa0085870:CDS | 45.0% | |
| AGACCTCAATCGTTGTTAGC+AGG | - | chr1_2:66199461-66199480 | None:intergenic | 45.0% | |
| CTTGTCACAAGCTCAGCTTT+GGG | - | chr1_2:66199580-66199599 | None:intergenic | 45.0% | |
| TCTTGTCACAAGCTCAGCTT+TGG | - | chr1_2:66199581-66199600 | None:intergenic | 45.0% | |
| TGTACGTCATTTCACACAGC+AGG | - | chr1_2:66199931-66199950 | None:intergenic | 45.0% | |
| TGCTGTGTGAAATGACGTAC+AGG | + | chr1_2:66199930-66199949 | Msa0085870:intron | 45.0% | |
| !!! | CGTGAAGGGACAGTTTTAGA+CGG | + | chr1_2:66199967-66199986 | Msa0085870:CDS | 45.0% |
| ACAGAAGGTGAGTGATTGCT+TGG | + | chr1_2:66200043-66200062 | Msa0085870:intron | 45.0% | |
| CGGAATAGAACAAACCTGTC+AGG | + | chr1_2:66200453-66200472 | Msa0085870:intron | 45.0% | |
| AACAAACCTGTCAGGCATAG+TGG | + | chr1_2:66200461-66200480 | Msa0085870:intron | 45.0% | |
| ATTCAACCACTATGCCTGAC+AGG | - | chr1_2:66200470-66200489 | None:intergenic | 45.0% | |
| TCAGGCATAGTGGTTGAATC+AGG | + | chr1_2:66200471-66200490 | Msa0085870:intron | 45.0% | |
| GGTTGAATCAGGAACCAGTT+AGG | + | chr1_2:66200482-66200501 | Msa0085870:intron | 45.0% | |
| CTTGAGGATGCCAAACCAAA+AGG | - | chr1_2:66200529-66200548 | None:intergenic | 45.0% | |
| AAGCAGGGATTTAGGTCTTG+AGG | - | chr1_2:66200545-66200564 | None:intergenic | 45.0% | |
| TTGAAGCGAAGCAGGGATTT+AGG | - | chr1_2:66200553-66200572 | None:intergenic | 45.0% | |
| ! | AACTCGTTTGAAGCGAAGCA+GGG | - | chr1_2:66200560-66200579 | None:intergenic | 45.0% |
| CCTGTCTCATAGGAGATAGT+AGG | - | chr1_2:66200591-66200610 | None:intergenic | 45.0% | |
| CCTACTATCTCCTATGAGAC+AGG | + | chr1_2:66200588-66200607 | Msa0085870:intron | 45.0% | |
| AACCATACTATTCGGGATCG+GGG | - | chr1_2:66200619-66200638 | None:intergenic | 45.0% | |
| CGATCCCGAATAGTATGGTT+TGG | + | chr1_2:66200619-66200638 | Msa0085870:intron | 45.0% | |
| ! | CTCCGTTGATGAGAAGGTTA+AGG | + | chr1_2:66201116-66201135 | Msa0085870:CDS | 45.0% |
| ! | AGGTTAAGGCTCTTGTTGTG+AGG | + | chr1_2:66201130-66201149 | Msa0085870:CDS | 45.0% |
| TCCCCGATAAAATCTCTCTG+AGG | + | chr1_2:66201160-66201179 | Msa0085870:CDS | 45.0% | |
| !! | CTGGGTTAATTGGCCTTGTT+TGG | + | chr1_2:66201238-66201257 | Msa0085870:intron | 45.0% |
| !! | ACGTAGTCGAGCTCTAAGAA+CGG | + | chr1_2:66201363-66201382 | Msa0085870:intron | 45.0% |
| TCCAGGTTCACTTTCAAGGT+CGG | - | chr1_2:66201496-66201515 | None:intergenic | 45.0% | |
| !! | GGCAAAGCACTAGTTGGTAA+GGG | - | chr1_2:66201707-66201726 | None:intergenic | 45.0% |
| ! | AGGCAAAGCACTAGTTGGTA+AGG | - | chr1_2:66201708-66201727 | None:intergenic | 45.0% |
| GTTTGGGCACATAAAGAGCA+TGG | + | chr1_2:66201960-66201979 | Msa0085870:three_prime_UTR | 45.0% | |
| ATAGTGCAAGACGCTTCTCT+GGG | - | chr1_2:66202180-66202199 | None:intergenic | 45.0% | |
| !!! | TAAATTTTAATTGTTAATTT+TGG | + | chr1_2:66200972-66200991 | Msa0085870:intron | 5.0% |
| ! | GAACAAGCCGTCACCTGTTT+TGG | + | chr1_2:66197917-66197936 | Msa0085870:CDS | 50.0% |
| ! | GCCTTCTGAAGAGGAAGCTT+TGG | + | chr1_2:66197962-66197981 | Msa0085870:CDS | 50.0% |
| GCCAAAGCTTCCTCTTCAGA+AGG | - | chr1_2:66197966-66197985 | None:intergenic | 50.0% | |
| GTTTCTACAACAGGCCTTCC+TGG | - | chr1_2:66198398-66198417 | None:intergenic | 50.0% | |
| GGAAGGCCTGTTGTAGAAAC+TGG | + | chr1_2:66198398-66198417 | Msa0085870:CDS | 50.0% | |
| CTACTAGAAGGCTCTTTCGC+CGG | + | chr1_2:66198477-66198496 | Msa0085870:CDS | 50.0% | |
| TCACTCGATGCCAAGCAATC+CGG | - | chr1_2:66198499-66198518 | None:intergenic | 50.0% | |
| GAAAGACAAAGGGGCCTGTT+TGG | - | chr1_2:66199006-66199025 | None:intergenic | 50.0% | |
| ACAGGCCCCTTTGTCTTTCA+AGG | + | chr1_2:66199007-66199026 | Msa0085870:intron | 50.0% | |
| CAGGCCCCTTTGTCTTTCAA+GGG | + | chr1_2:66199008-66199027 | Msa0085870:intron | 50.0% | |
| !! | TCACAAGCTCAGCTTTGGGT+AGG | - | chr1_2:66199576-66199595 | None:intergenic | 50.0% |
| TGCTTTCTGCATGAGCCCTT+AGG | + | chr1_2:66200368-66200387 | Msa0085870:intron | 50.0% | |
| GCTTTCTGCATGAGCCCTTA+GGG | + | chr1_2:66200369-66200388 | Msa0085870:intron | 50.0% | |
| ! | CAACTCGTTTGAAGCGAAGC+AGG | - | chr1_2:66200561-66200580 | None:intergenic | 50.0% |
| AACCCCGATCCCGAATAGTA+TGG | + | chr1_2:66200614-66200633 | Msa0085870:intron | 50.0% | |
| TTGGTTCAATGGGACGGATC+CGG | + | chr1_2:66200638-66200657 | Msa0085870:intron | 50.0% | |
| ! | GCAAGTAGGGCATTCACAAC+CGG | - | chr1_2:66200660-66200679 | None:intergenic | 50.0% |
| ACATGCAGCAACCCACTGAA+AGG | - | chr1_2:66201051-66201070 | None:intergenic | 50.0% | |
| ! | CGTACTCTCCGTTGATGAGA+AGG | + | chr1_2:66201110-66201129 | Msa0085870:CDS | 50.0% |
| CTGGTGAGCCATGCAACATA+AGG | - | chr1_2:66201844-66201863 | None:intergenic | 50.0% | |
| GATAGTGCAAGACGCTTCTC+TGG | - | chr1_2:66202181-66202200 | None:intergenic | 50.0% | |
| ! | ATGAGTGGAGTGTCAGTGCC+AGG | + | chr1_2:66198377-66198396 | Msa0085870:CDS | 55.0% |
| ! | GGATTGCTTGGCATCGAGTG+AGG | + | chr1_2:66198498-66198517 | Msa0085870:CDS | 55.0% |
| CGGCCTGCTAACAACGATTG+AGG | + | chr1_2:66199455-66199474 | Msa0085870:CDS | 55.0% | |
| CGGGGTTTACCCTGTCTCAT+AGG | - | chr1_2:66200601-66200620 | None:intergenic | 55.0% | |
| TCAAGGTCGGCAATGCTGCA+TGG | - | chr1_2:66201483-66201502 | None:intergenic | 55.0% | |
| GCCGACCTTGAAAGTGAACC+TGG | + | chr1_2:66201492-66201511 | Msa0085870:CDS | 55.0% | |
| ATGGCTCACCAGTCCCATGA+CGG | + | chr1_2:66201852-66201871 | Msa0085870:three_prime_UTR | 55.0% | |
| TCAAACGGCATGCCCGTCAT+GGG | - | chr1_2:66201868-66201887 | None:intergenic | 55.0% | |
| AATCTCACCACTCGAGGTCG+AGG | - | chr1_2:66201911-66201930 | None:intergenic | 55.0% | |
| ! | GTGGAGTGTCAGTGCCAGGA+AGG | + | chr1_2:66198381-66198400 | Msa0085870:CDS | 60.0% |
| GGCTCTTTCGCCGGATTGCT+TGG | + | chr1_2:66198486-66198505 | Msa0085870:CDS | 60.0% | |
| ! | TGCTTGGCATCGAGTGAGGC+AGG | + | chr1_2:66198502-66198521 | Msa0085870:CDS | 60.0% |
| TGGCTCACCAGTCCCATGAC+GGG | + | chr1_2:66201853-66201872 | Msa0085870:three_prime_UTR | 60.0% | |
| CTCAAACGGCATGCCCGTCA+TGG | - | chr1_2:66201869-66201888 | None:intergenic | 60.0% | |
| AGAGCCTCCTCGACCTCGAG+TGG | + | chr1_2:66201901-66201920 | Msa0085870:three_prime_UTR | 65.0% | |
| CTCACCACTCGAGGTCGAGG+AGG | - | chr1_2:66201908-66201927 | None:intergenic | 65.0% | |
| CGGCATGCCCGTCATGGGAC+TGG | - | chr1_2:66201863-66201882 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66197586 | 66202359 | 66197586 | ID=Msa0085870;Name=Msa0085870 |
| chr1_2 | mRNA | 66197586 | 66202359 | 66197586 | ID=Msa0085870-mRNA-1;Parent=Msa0085870;Name=Msa0085870-mRNA-1;_AED=0.13;_eAED=0.13;_QI=65|1|1|1|1|1|8|578|510 |
| chr1_2 | exon | 66197586 | 66198523 | 66197586 | ID=Msa0085870-mRNA-1:exon:22405;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66199402 | 66199476 | 66199402 | ID=Msa0085870-mRNA-1:exon:22406;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66199559 | 66199630 | 66199559 | ID=Msa0085870-mRNA-1:exon:22407;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66199744 | 66199824 | 66199744 | ID=Msa0085870-mRNA-1:exon:22408;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66199952 | 66200049 | 66199952 | ID=Msa0085870-mRNA-1:exon:22409;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66201056 | 66201181 | 66201056 | ID=Msa0085870-mRNA-1:exon:22410;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66201488 | 66201536 | 66201488 | ID=Msa0085870-mRNA-1:exon:22411;Parent=Msa0085870-mRNA-1 |
| chr1_2 | exon | 66201623 | 66202359 | 66201623 | ID=Msa0085870-mRNA-1:exon:22412;Parent=Msa0085870-mRNA-1 |
| chr1_2 | five_prime_UTR | 66197586 | 66197650 | 66197586 | ID=Msa0085870-mRNA-1:five_prime_utr;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66197651 | 66198523 | 66197651 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66199402 | 66199476 | 66199402 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66199559 | 66199630 | 66199559 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66199744 | 66199824 | 66199744 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66199952 | 66200049 | 66199952 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66201056 | 66201181 | 66201056 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66201488 | 66201536 | 66201488 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | CDS | 66201623 | 66201781 | 66201623 | ID=Msa0085870-mRNA-1:cds;Parent=Msa0085870-mRNA-1 |
| chr1_2 | three_prime_UTR | 66201782 | 66202359 | 66201782 | ID=Msa0085870-mRNA-1:three_prime_utr;Parent=Msa0085870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
