AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0410950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410950 MtrunA17_Chr3g0102041 86.826 334 36 3 4 330 1 333 0.0 590
Msa0410950 MtrunA17_Chr8g0371931 75.749 334 73 3 4 330 1 333 0.0 527
Msa0410950 MtrunA17_Chr8g0371921 75.449 334 74 3 4 330 1 333 0.0 524
Msa0410950 MtrunA17_Chr5g0405411 69.486 331 93 3 4 327 1 330 2.03e-170 478
Msa0410950 MtrunA17_Chr8g0345831 37.261 314 171 8 1 300 1 302 1.22e-60 197
Msa0410950 MtrunA17_Chr3g0109041 34.014 294 175 6 23 302 25 313 2.00e-56 187
Msa0410950 MtrunA17_Chr3g0128001 35.692 325 188 10 19 332 15 329 2.59e-55 183
Msa0410950 MtrunA17_Chr7g0239121 33.628 339 208 9 6 332 12 345 7.96e-55 182
Msa0410950 MtrunA17_Chr7g0239111 32.544 338 212 10 6 332 16 348 1.09e-52 177
Msa0410950 MtrunA17_Chr3g0113641 34.169 319 195 8 16 322 23 338 1.10e-52 177
Msa0410950 MtrunA17_Chr7g0239101 33.229 319 199 8 23 332 35 348 1.38e-52 177
Msa0410950 MtrunA17_Chr5g0437181 34.769 325 185 9 16 322 22 337 1.85e-51 174
Msa0410950 MtrunA17_Chr7g0242551 33.981 309 170 9 18 302 25 323 1.11e-50 172
Msa0410950 MtrunA17_Chr4g0006371 34.069 317 170 8 17 302 23 331 4.50e-50 171
Msa0410950 MtrunA17_Chr1g0179801 33.775 302 166 9 14 300 50 332 3.04e-48 166
Msa0410950 MtrunA17_Chr2g0296371 33.670 297 177 9 18 301 27 316 3.61e-47 163
Msa0410950 MtrunA17_Chr5g0412671 32.822 326 196 9 18 331 14 328 8.81e-47 161
Msa0410950 MtrunA17_Chr7g0239071 35.955 267 160 7 75 332 29 293 1.25e-46 160
Msa0410950 MtrunA17_Chr7g0239821 30.000 340 218 10 6 332 25 357 1.91e-44 155
Msa0410950 MtrunA17_Chr5g0412651 32.686 309 187 8 18 314 14 313 2.26e-44 155
Msa0410950 MtrunA17_Chr7g0250511 31.741 293 186 9 17 300 23 310 2.30e-44 155
Msa0410950 MtrunA17_Chr5g0412681 32.278 316 185 8 27 331 18 315 3.14e-44 154
Msa0410950 MtrunA17_Chr3g0087031 32.776 299 185 9 43 331 60 352 5.08e-44 154
Msa0410950 MtrunA17_Chr5g0424201 32.881 295 180 8 17 300 18 305 1.60e-43 152
Msa0410950 MtrunA17_Chr5g0424211 31.290 310 187 8 7 300 6 305 3.53e-43 152
Msa0410950 MtrunA17_Chr5g0398291 33.445 299 175 8 22 298 17 313 6.24e-43 151
Msa0410950 MtrunA17_Chr8g0375601 29.514 288 191 6 23 300 26 311 1.30e-42 151
Msa0410950 MtrunA17_Chr7g0265221 31.544 298 174 9 28 300 47 339 2.20e-42 150
Msa0410950 MtrunA17_Chr3g0121141 33.083 266 166 6 41 300 2 261 2.30e-42 149
Msa0410950 MtrunA17_Chr5g0439011 33.460 263 163 6 44 300 6 262 3.91e-42 148
Msa0410950 MtrunA17_Chr8g0375671 30.855 269 173 7 42 300 51 316 7.56e-42 149
Msa0410950 MtrunA17_Chr8g0375571 32.364 275 173 8 36 300 38 309 9.36e-42 148
Msa0410950 MtrunA17_Chr4g0045411 30.435 299 189 5 21 302 10 306 1.06e-41 148
Msa0410950 MtrunA17_Chr1g0184161 31.353 303 184 10 18 307 14 305 1.09e-41 148
Msa0410950 MtrunA17_Chr3g0126741 34.799 273 153 9 43 300 59 321 1.20e-41 148
Msa0410950 MtrunA17_Chr1g0184101 31.293 294 183 7 18 300 13 298 1.95e-41 147
Msa0410950 MtrunA17_Chr4g0050031 30.746 335 211 10 7 324 23 353 2.55e-41 147
Msa0410950 MtrunA17_Chr5g0423251 28.939 311 207 8 31 332 35 340 2.94e-41 147
Msa0410950 MtrunA17_Chr8g0365241 29.930 284 185 7 27 301 41 319 1.06e-40 145
Msa0410950 MtrunA17_Chr7g0220001 33.700 273 156 10 43 302 41 301 1.22e-40 145
Msa0410950 MtrunA17_Chr7g0220011 31.773 299 178 12 17 302 14 299 1.33e-40 145
Msa0410950 MtrunA17_Chr4g0066121 33.333 282 166 9 22 291 41 312 1.42e-40 145
Msa0410950 MtrunA17_Chr2g0311701 30.935 278 173 7 23 289 48 317 2.13e-40 145
Msa0410950 MtrunA17_Chr3g0114861 32.107 299 181 8 15 301 13 301 3.95e-40 143
Msa0410950 MtrunA17_Chr1g0162191 30.492 305 191 7 7 301 17 310 5.63e-40 144
Msa0410950 MtrunA17_Chr1g0162361 30.421 309 189 6 19 308 4 305 6.15e-40 143
Msa0410950 MtrunA17_Chr6g0455481 30.564 337 208 11 1 323 1 325 6.19e-40 143
Msa0410950 MtrunA17_Chr7g0232161 33.210 271 166 9 15 275 30 295 1.06e-39 142
Msa0410950 MtrunA17_Chr1g0204181 33.333 276 163 8 42 300 58 329 1.54e-39 143
Msa0410950 MtrunA17_Chr1g0187811 30.403 273 171 5 43 302 188 454 2.71e-39 144
Msa0410950 MtrunA17_Chr1g0162351 28.896 308 193 5 19 302 47 352 3.69e-39 142
Msa0410950 MtrunA17_Chr5g0420981 31.301 246 159 5 64 301 72 315 3.97e-39 141
Msa0410950 MtrunA17_Chr1g0184111 32.432 296 181 9 18 302 13 300 4.09e-39 141
Msa0410950 MtrunA17_Chr1g0184151 29.642 307 182 10 9 300 11 298 6.28e-39 140
Msa0410950 MtrunA17_Chr5g0423191 29.167 312 205 9 31 332 35 340 8.25e-39 140
Msa0410950 MtrunA17_Chr8g0364471 31.673 281 152 6 33 289 51 315 8.95e-39 141
Msa0410950 MtrunA17_Chr1g0162321 28.571 308 194 5 19 302 47 352 1.01e-38 141
Msa0410950 MtrunA17_Chr2g0289341 31.203 266 171 6 41 300 2 261 1.08e-38 139
Msa0410950 MtrunA17_Chr8g0370711 29.779 272 179 6 39 301 48 316 1.73e-38 140
Msa0410950 MtrunA17_Chr8g0336751 32.197 264 147 5 43 289 94 342 2.33e-38 140
Msa0410950 MtrunA17_Chr2g0314381 30.292 274 176 7 39 302 73 341 2.68e-38 140
Msa0410950 MtrunA17_Chr5g0420901 30.403 273 177 5 36 300 39 306 2.77e-38 139
Msa0410950 MtrunA17_Chr1g0187831 31.373 255 161 4 43 289 70 318 5.41e-38 139
Msa0410950 MtrunA17_Chr1g0184121 30.405 296 187 8 18 302 13 300 6.19e-38 138
Msa0410950 MtrunA17_Chr3g0114871 32.900 231 141 4 18 239 17 242 1.51e-37 135
Msa0410950 MtrunA17_Chr4g0045451 29.739 306 191 10 19 302 4 307 1.55e-37 137
Msa0410950 MtrunA17_Chr5g0426891 32.237 304 171 10 11 300 19 301 1.63e-37 137
Msa0410950 MtrunA17_Chr8g0375681 31.624 234 146 6 77 300 15 244 1.66e-37 135
Msa0410950 MtrunA17_Chr8g0336631 31.518 257 160 5 43 289 60 310 1.79e-37 137
Msa0410950 MtrunA17_Chr5g0421011 27.972 286 195 6 24 300 24 307 1.88e-37 137
Msa0410950 MtrunA17_Chr3g0125201 31.715 309 175 12 43 332 3 294 2.15e-37 135
Msa0410950 MtrunA17_Chr2g0311741 31.868 273 171 6 39 302 23 289 2.60e-37 136
Msa0410950 MtrunA17_Chr4g0055591 31.538 260 149 7 43 289 61 304 2.81e-37 137
Msa0410950 MtrunA17_Chr1g0187821 30.233 258 160 5 43 289 67 315 3.17e-37 137
Msa0410950 MtrunA17_Chr1g0184241 29.693 293 180 7 23 302 49 328 3.36e-37 136
Msa0410950 MtrunA17_Chr3g0145171 28.772 285 186 9 39 311 48 327 3.51e-37 136
Msa0410950 MtrunA17_Chr5g0420951 29.779 272 177 7 38 300 48 314 4.68e-37 136
Msa0410950 MtrunA17_Chr4g0045471 28.896 308 192 9 19 302 4 308 7.13e-37 135
Msa0410950 MtrunA17_Chr6g0474391 33.333 276 163 8 42 300 63 334 9.11e-37 135
Msa0410950 MtrunA17_Chr5g0421101 28.777 278 185 5 31 300 35 307 1.05e-36 135
Msa0410950 MtrunA17_Chr7g0225881 33.333 267 154 9 43 294 67 324 1.17e-36 135
Msa0410950 MtrunA17_Chr2g0314401 29.588 267 177 5 42 300 50 313 1.43e-36 134
Msa0410950 MtrunA17_Chr3g0145181 32.400 250 153 6 64 301 71 316 2.45e-36 134
Msa0410950 MtrunA17_Chr2g0311681 30.877 285 178 7 13 289 38 311 2.55e-36 134
Msa0410950 MtrunA17_Chr5g0420941 30.037 273 178 5 36 300 38 305 3.32e-36 134
Msa0410950 MtrunA17_Chr8g0370721 29.779 272 179 7 39 301 48 316 3.53e-36 134
Msa0410950 MtrunA17_Chr7g0235951 31.227 269 159 7 43 297 67 323 6.23e-36 133
Msa0410950 MtrunA17_Chr2g0311831 33.591 259 150 7 43 289 68 316 6.87e-36 133
Msa0410950 MtrunA17_Chr5g0421041 27.492 331 221 10 13 332 16 338 7.46e-36 132
Msa0410950 MtrunA17_Chr8g0336781 33.077 260 152 9 43 289 95 345 9.95e-36 133
Msa0410950 MtrunA17_Chr4g0045441 28.710 310 189 8 19 302 4 307 1.59e-35 132
Msa0410950 MtrunA17_Chr2g0311691 30.588 255 163 6 43 289 63 311 1.96e-35 132
Msa0410950 MtrunA17_Chr2g0314391 29.368 269 179 6 42 302 69 334 2.07e-35 132
Msa0410950 MtrunA17_Chr5g0423221 27.362 307 208 9 36 332 64 365 2.12e-35 132
Msa0410950 MtrunA17_Chr6g0472861 32.331 266 144 7 43 289 70 318 2.69e-35 132
Msa0410950 MtrunA17_Chr2g0311761 31.884 276 164 8 30 289 50 317 3.20e-35 131
Msa0410950 MtrunA17_Chr8g0336761 33.591 259 151 8 43 289 60 309 3.53e-35 131
Msa0410950 MtrunA17_Chr8g0336851 31.923 260 154 7 43 289 60 309 6.50e-35 130
Msa0410950 MtrunA17_Chr3g0145201 32.400 250 153 6 64 301 706 951 9.82e-35 134
Msa0410950 MtrunA17_Chr8g0348081 30.888 259 158 8 43 289 60 309 1.55e-34 129
Msa0410950 MtrunA17_Chr8g0375701 30.420 286 179 9 27 302 41 316 1.68e-34 129
Msa0410950 MtrunA17_Chr5g0423201 28.571 308 203 9 36 332 40 341 2.26e-34 129
Msa0410950 MtrunA17_Chr2g0311711 30.196 255 164 5 43 289 67 315 2.45e-34 129
Msa0410950 MtrunA17_Chr2g0311631 30.072 276 169 9 42 301 54 321 1.45e-33 127
Msa0410950 MtrunA17_Chr3g0093761 29.670 273 157 8 43 298 56 310 1.74e-33 126
Msa0410950 MtrunA17_Chr2g0311861 31.970 269 152 9 30 289 46 292 2.52e-33 125
Msa0410950 MtrunA17_Chr4g0045431 28.339 307 192 8 19 301 4 306 3.85e-33 125
Msa0410950 MtrunA17_Chr3g0093741 29.779 272 159 7 43 298 56 311 1.39e-32 124
Msa0410950 MtrunA17_Chr5g0421091 29.545 264 172 6 36 290 38 296 1.80e-32 124
Msa0410950 MtrunA17_Chr4g0011311 32.127 221 128 4 43 252 67 276 2.07e-32 122
Msa0410950 MtrunA17_Chr4g0064781 30.705 241 152 6 63 292 65 301 4.33e-32 122
Msa0410950 MtrunA17_Chr1g0191201 31.317 281 168 8 65 323 76 353 4.89e-32 123
Msa0410950 MtrunA17_Chr7g0265351 29.670 273 176 6 37 301 33 297 7.63e-32 121
Msa0410950 MtrunA17_Chr8g0336861 29.278 263 166 8 39 289 56 310 8.13e-32 122
Msa0410950 MtrunA17_Chr7g0266651 30.690 290 167 9 18 289 34 307 2.10e-31 121
Msa0410950 MtrunA17_Chr2g0311921 32.308 260 153 9 43 289 54 303 2.23e-31 120
Msa0410950 MtrunA17_Chr8g0354261 29.749 279 176 9 23 289 48 318 2.37e-31 121
Msa0410950 MtrunA17_Chr8g0351101 30.293 307 192 9 12 302 25 325 2.76e-31 120
Msa0410950 MtrunA17_Chr2g0332191 30.040 253 154 6 65 300 66 312 3.51e-31 120
Msa0410950 MtrunA17_Chr3g0130391 30.882 272 150 7 65 309 89 349 4.27e-31 120
Msa0410950 MtrunA17_Chr3g0093751 28.309 272 163 7 43 298 56 311 1.12e-30 119
Msa0410950 MtrunA17_Chr1g0167961 32.616 279 155 12 43 302 69 333 1.44e-30 119
Msa0410950 MtrunA17_Chr5g0423211 27.612 268 178 7 36 292 40 302 1.60e-30 118
Msa0410950 MtrunA17_Chr1g0167911 32.222 270 152 8 43 294 54 310 1.77e-30 118
Msa0410950 MtrunA17_Chr7g0239091 27.619 315 214 8 22 332 139 443 2.98e-30 119
Msa0410950 MtrunA17_Chr3g0125421 31.173 324 178 13 42 329 35 349 5.05e-30 117
Msa0410950 MtrunA17_Chr1g0148771 31.599 269 158 8 52 300 56 318 1.22e-29 116
Msa0410950 MtrunA17_Chr8g0354241 28.470 281 177 8 23 289 48 318 1.44e-29 116
Msa0410950 MtrunA17_Chr1g0167951 31.298 262 159 6 39 289 49 300 3.12e-29 115
Msa0410950 MtrunA17_Chr1g0161041 30.323 310 192 10 36 332 89 387 1.16e-28 114
Msa0410950 MtrunA17_Chr6g0488511 28.464 267 175 7 43 300 3 262 2.37e-28 111
Msa0410950 MtrunA17_Chr8g0335411 30.370 270 160 8 43 297 67 323 5.43e-28 112
Msa0410950 MtrunA17_Chr7g0236011 31.660 259 155 5 43 289 67 315 5.71e-28 112
Msa0410950 MtrunA17_Chr1g0161111 30.712 267 167 7 36 293 125 382 6.00e-28 112
Msa0410950 MtrunA17_Chr1g0161081 28.896 308 199 9 36 332 66 364 6.82e-28 111
Msa0410950 MtrunA17_Chr7g0247991 31.852 270 156 9 43 297 67 323 3.91e-27 109
Msa0410950 MtrunA17_Chr1g0167931 29.478 268 139 8 43 302 54 279 9.69e-27 107
Msa0410950 MtrunA17_Chr4g0068891 28.767 292 174 11 28 300 5 281 2.85e-26 106
Msa0410950 MtrunA17_Chr4g0066991 31.418 261 149 7 43 297 67 303 4.10e-26 106
Msa0410950 MtrunA17_Chr2g0313111 27.381 252 161 8 65 301 42 286 5.34e-26 105
Msa0410950 MtrunA17_Chr2g0319491 28.090 267 172 6 42 298 32 288 1.00e-25 105
Msa0410950 MtrunA17_Chr5g0420721 28.099 242 161 8 101 332 4 242 1.14e-25 103
Msa0410950 MtrunA17_Chr2g0285931 28.832 274 170 9 48 301 25 293 1.59e-25 104
Msa0410950 MtrunA17_Chr4g0045461 27.869 305 197 8 19 302 4 306 2.65e-25 104
Msa0410950 MtrunA17_Chr1g0194321 27.541 305 179 10 21 301 7 293 9.62e-25 102
Msa0410950 MtrunA17_Chr3g0092531 29.455 275 179 7 63 327 28 297 1.11e-24 102
Msa0410950 MtrunA17_Chr8g0358941 26.736 288 163 12 42 301 26 293 8.65e-24 99.8
Msa0410950 MtrunA17_Chr8g0384481 27.835 291 182 10 40 309 56 339 1.33e-22 97.1
Msa0410950 MtrunA17_Chr7g0235981 28.244 262 157 8 48 289 19 269 2.05e-22 95.9
Msa0410950 MtrunA17_Chr3g0126761 34.641 153 90 4 154 300 44 192 6.18e-22 92.8
Msa0410950 MtrunA17_Chr4g0053251 27.907 301 178 11 59 330 32 322 8.56e-22 94.0
Msa0410950 MtrunA17_Chr2g0314371 26.250 240 146 6 39 250 48 284 1.61e-21 93.6
Msa0410950 MtrunA17_Chr7g0247741 26.263 297 197 7 39 319 7 297 3.15e-21 92.4
Msa0410950 MtrunA17_Chr8g0362741 32.447 188 110 6 73 252 83 261 4.65e-21 91.3
Msa0410950 MtrunA17_Chr8g0336871 38.095 126 70 4 165 289 1 119 9.97e-21 87.8
Msa0410950 MtrunA17_Chr5g0407781 25.296 253 171 8 43 289 5 245 1.67e-20 90.1
Msa0410950 MtrunA17_Chr4g0075471 40.000 105 58 3 199 300 29 131 1.87e-20 86.7
Msa0410950 MtrunA17_Chr8g0384461 27.273 275 173 9 43 298 47 313 3.55e-20 90.1
Msa0410950 MtrunA17_Chr8g0389941 26.102 295 172 10 63 324 49 330 5.31e-20 89.4
Msa0410950 MtrunA17_Chr1g0170631 32.609 138 90 2 154 289 3 139 6.86e-20 86.3
Msa0410950 MtrunA17_Chr8g0348951 24.671 304 205 8 40 323 2 301 1.34e-19 87.8
Msa0410950 MtrunA17_Chr5g0394071 31.757 148 93 3 155 298 3 146 4.07e-19 83.6
Msa0410950 MtrunA17_Chr8g0364171 40.594 101 54 3 154 252 18 114 8.43e-19 81.6
Msa0410950 MtrunA17_Chr1g0161101 44.444 99 45 3 197 294 404 493 1.31e-18 86.7
Msa0410950 MtrunA17_Chr6g0486831 26.820 261 163 8 65 298 38 297 2.85e-18 84.3
Msa0410950 MtrunA17_Chr8g0336801 38.298 94 54 2 198 289 10 101 6.89e-18 79.7
Msa0410950 MtrunA17_Chr5g0407731 24.306 288 200 10 41 322 31 306 7.70e-18 83.2
Msa0410950 MtrunA17_Chr1g0158021 27.602 221 135 10 39 247 45 252 1.06e-17 81.6
Msa0410950 MtrunA17_Chr4g0052251 25.385 260 175 9 65 308 43 299 1.98e-17 82.0
Msa0410950 MtrunA17_Chr4g0004061 28.244 262 171 7 61 314 29 281 4.67e-17 80.5
Msa0410950 MtrunA17_Chr8g0336831 28.947 190 119 6 43 222 60 243 6.46e-17 79.3
Msa0410950 MtrunA17_Chr7g0233661 34.677 124 73 3 179 298 1 120 7.08e-17 77.0
Msa0410950 MtrunA17_Chr4g0037611 32.500 160 93 7 171 325 8 157 3.03e-16 75.9
Msa0410950 MtrunA17_Chr4g0055911 25.540 278 175 11 43 298 9 276 4.75e-16 77.8
Msa0410950 MtrunA17_Chr4g0064771 30.882 204 111 9 133 330 16 195 3.45e-15 73.6
Msa0410950 MtrunA17_Chr5g0420881 35.238 105 63 3 199 300 1 103 1.31e-14 70.5
Msa0410950 MtrunA17_Chr2g0311611 48.333 60 24 2 199 252 1 59 1.84e-14 67.4
Msa0410950 MtrunA17_Chr4g0055871 25.448 279 169 10 43 298 9 271 2.52e-14 72.8
Msa0410950 MtrunA17_Chr2g0293931 30.508 177 101 8 160 319 13 184 3.33e-14 70.5
Msa0410950 MtrunA17_Chr1g0167921 35.714 98 61 1 155 252 50 145 7.74e-14 68.9
Msa0410950 MtrunA17_Chr7g0235991 29.801 151 86 4 44 183 22 163 2.00e-13 68.2
Msa0410950 MtrunA17_Chr8g0375661 30.370 135 85 5 23 150 33 165 1.64e-12 65.1
Msa0410950 MtrunA17_Chr8g0375641 31.034 116 72 4 42 150 51 165 1.92e-12 65.1
Msa0410950 MtrunA17_Chr3g0138351 27.734 256 157 9 60 298 29 273 2.32e-12 67.0
Msa0410950 MtrunA17_Chr7g0219991 30.928 97 63 3 155 250 249 342 1.71e-11 64.7
Msa0410950 MtrunA17_Chr8g0375581 36.364 77 46 3 175 250 1 75 6.71e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0410950 AT3G51240.1 70.659 334 89 4 4 330 1 332 5.05e-172 482
Msa0410950 AT3G51240.2 72.581 248 61 2 90 330 1 248 1.29e-130 374
Msa0410950 AT4G10490.1 34.756 328 192 8 7 323 12 328 1.19e-58 192
Msa0410950 AT4G10500.1 35.172 290 175 6 19 300 20 304 9.92e-58 190
Msa0410950 AT4G16330.2 36.996 273 151 7 42 302 66 329 6.47e-57 189
Msa0410950 AT5G24530.1 35.030 334 189 11 15 332 11 332 2.09e-56 186
Msa0410950 AT2G38240.1 36.213 301 166 11 18 302 22 312 1.47e-49 169
Msa0410950 AT3G11180.1 34.333 300 176 8 18 302 66 359 7.40e-49 169
Msa0410950 AT3G11180.2 34.333 300 176 8 18 302 66 359 8.15e-49 168
Msa0410950 AT5G05600.1 34.314 306 170 9 17 302 36 330 8.19e-49 167
Msa0410950 AT1G78550.1 30.921 304 197 7 9 302 17 317 7.07e-48 165
Msa0410950 AT4G16330.1 38.222 225 125 6 90 302 1 223 3.44e-47 160
Msa0410950 AT3G19010.1 32.237 304 183 6 19 302 4 304 4.92e-47 162
Msa0410950 AT3G19010.4 32.237 304 183 6 19 302 4 304 4.92e-47 162
Msa0410950 AT3G55970.1 33.333 303 180 9 18 302 24 322 4.27e-45 157
Msa0410950 AT1G55290.1 32.639 288 175 9 39 315 58 337 1.32e-44 156
Msa0410950 AT3G19000.1 31.373 306 188 5 19 302 4 309 1.68e-43 153
Msa0410950 AT3G21420.1 31.894 301 184 9 17 301 26 321 5.30e-43 152
Msa0410950 AT4G22880.1 33.333 270 165 7 42 298 46 313 1.58e-42 150
Msa0410950 AT4G22880.2 33.333 270 165 7 42 298 46 313 1.58e-42 150
Msa0410950 AT4G22880.3 33.333 270 165 7 42 298 46 313 1.58e-42 150
Msa0410950 AT5G08640.2 31.757 296 184 6 23 307 23 311 1.73e-42 150
Msa0410950 AT5G08640.1 31.757 296 184 6 23 307 23 311 1.73e-42 150
Msa0410950 AT2G36690.2 33.577 274 155 12 40 297 58 320 8.47e-41 146
Msa0410950 AT2G36690.1 33.577 274 155 12 40 297 58 320 8.47e-41 146
Msa0410950 AT3G60290.1 31.655 278 175 8 23 290 31 303 1.49e-40 145
Msa0410950 AT4G21690.1 32.246 276 162 7 43 301 47 314 2.61e-40 145
Msa0410950 AT1G78550.2 33.051 236 148 5 75 302 6 239 4.89e-40 142
Msa0410950 AT5G05600.2 34.940 249 137 7 17 249 36 275 6.60e-40 142
Msa0410950 AT3G19000.2 32.143 252 151 4 19 250 4 255 8.21e-40 141
Msa0410950 AT1G17020.1 30.606 330 209 9 1 319 17 337 1.11e-39 143
Msa0410950 AT3G19010.2 32.661 248 150 4 19 250 4 250 2.26e-39 141
Msa0410950 AT2G44800.1 30.935 278 177 8 23 290 31 303 2.67e-39 142
Msa0410950 AT3G13610.1 30.357 280 171 9 36 301 52 321 5.09e-39 142
Msa0410950 AT3G19010.3 29.605 304 161 7 19 302 4 274 2.60e-38 139
Msa0410950 AT4G25300.1 29.073 313 200 9 1 302 16 317 2.73e-38 139
Msa0410950 AT5G59540.1 31.298 262 162 6 39 289 57 311 4.12e-38 139
Msa0410950 AT1G15550.1 29.470 302 192 7 39 328 53 345 7.90e-38 138
Msa0410950 AT5G63590.1 31.295 278 169 6 37 301 8 276 8.09e-38 137
Msa0410950 AT1G06620.1 32.197 264 155 5 39 289 58 310 1.20e-37 138
Msa0410950 AT1G60980.1 31.847 314 186 10 42 331 56 365 1.44e-37 138
Msa0410950 AT1G05010.1 31.970 269 166 10 41 300 2 262 2.05e-37 136
Msa0410950 AT1G03410.2 34.717 265 151 8 43 292 57 314 2.23e-37 137
Msa0410950 AT4G25310.1 30.488 328 207 11 17 332 27 345 2.39e-37 137
Msa0410950 AT1G03400.1 33.465 254 146 6 43 287 56 295 4.24e-37 136
Msa0410950 AT1G04380.1 31.599 269 147 9 39 289 41 290 5.46e-37 136
Msa0410950 AT1G03410.1 34.717 265 151 8 43 292 94 351 6.76e-37 137
Msa0410950 AT3G55970.2 33.603 247 148 7 18 250 24 268 1.09e-36 134
Msa0410950 AT5G63600.2 31.227 269 166 7 42 301 32 290 1.53e-36 134
Msa0410950 AT5G63600.1 31.343 268 166 7 42 301 32 289 2.63e-36 134
Msa0410950 AT5G43450.1 34.091 264 146 11 40 289 58 307 3.46e-36 134
Msa0410950 AT5G43440.1 31.395 258 163 6 40 289 59 310 5.15e-36 134
Msa0410950 AT1G49390.1 30.597 268 175 5 42 300 44 309 2.45e-35 131
Msa0410950 AT5G20550.1 29.078 282 179 7 37 301 34 311 2.71e-35 131
Msa0410950 AT5G07200.1 30.063 316 192 9 42 331 57 369 3.74e-35 132
Msa0410950 AT5G59530.1 30.798 263 163 6 39 289 54 309 4.44e-35 131
Msa0410950 AT1G17010.1 29.630 270 178 7 42 302 53 319 6.29e-35 130
Msa0410950 AT1G03400.2 31.206 282 143 6 43 287 56 323 1.28e-34 130
Msa0410950 AT1G80330.1 29.787 329 197 10 1 306 1 318 1.39e-34 130
Msa0410950 AT1G77330.1 31.802 283 161 11 43 307 3 271 1.40e-34 129
Msa0410950 AT3G61400.1 34.156 243 143 8 58 289 80 316 1.73e-34 130
Msa0410950 AT5G63595.1 30.337 267 162 7 38 298 14 262 3.78e-34 127
Msa0410950 AT3G12900.1 32.959 267 159 9 46 301 59 316 1.39e-33 127
Msa0410950 AT4G25420.1 30.037 273 175 5 42 300 60 330 1.73e-33 127
Msa0410950 AT5G20400.1 28.620 297 187 9 42 321 44 332 2.57e-33 126
Msa0410950 AT1G80340.1 30.797 276 167 8 39 301 46 310 2.83e-33 126
Msa0410950 AT5G59540.2 32.287 223 135 5 39 252 57 272 3.96e-33 124
Msa0410950 AT1G06620.2 34.167 240 124 7 29 252 50 271 7.54e-33 123
Msa0410950 AT5G07480.1 26.214 309 201 9 1 295 12 307 1.72e-32 124
Msa0410950 AT2G30830.1 31.502 273 163 9 29 289 44 304 2.50e-32 124
Msa0410950 AT1G62380.1 29.213 267 177 6 40 300 4 264 2.73e-32 123
Msa0410950 AT5G51810.1 28.803 309 193 6 43 330 63 365 3.55e-32 124
Msa0410950 AT5G43450.2 35.556 225 119 10 40 252 58 268 3.72e-32 122
Msa0410950 AT5G54000.2 29.520 271 176 6 42 301 45 311 4.84e-32 122
Msa0410950 AT5G43440.2 32.420 219 136 5 40 252 59 271 8.47e-32 120
Msa0410950 AT2G19590.1 30.627 271 163 8 42 300 10 267 8.58e-32 121
Msa0410950 AT1G04350.1 30.888 259 156 8 43 289 58 305 1.22e-31 122
Msa0410950 AT1G04380.2 32.609 230 120 8 39 252 41 251 1.85e-31 119
Msa0410950 AT1G06650.2 31.907 257 159 7 43 289 64 314 2.49e-31 121
Msa0410950 AT1G12010.1 27.341 267 182 6 40 300 4 264 4.13e-31 119
Msa0410950 AT1G49390.2 31.034 232 149 5 78 300 1 230 1.79e-30 117
Msa0410950 AT2G30840.1 31.502 273 168 11 43 302 57 323 2.05e-30 119
Msa0410950 AT1G06645.1 32.959 267 153 10 39 289 68 324 1.04e-29 117
Msa0410950 AT5G12270.1 27.852 298 190 8 18 301 32 318 1.71e-29 116
Msa0410950 AT3G61400.2 35.468 203 117 6 58 252 80 276 2.41e-29 114
Msa0410950 AT1G06640.1 32.171 258 157 9 43 289 64 314 4.66e-29 115
Msa0410950 AT2G30840.3 31.734 271 164 11 43 302 57 317 4.85e-29 115
Msa0410950 AT4G21200.1 28.889 270 165 9 42 298 41 296 4.88e-29 114
Msa0410950 AT1G44090.1 30.164 305 191 10 42 328 62 362 2.96e-28 113
Msa0410950 AT2G25450.1 30.620 258 160 7 43 289 55 304 5.18e-28 112
Msa0410950 AT5G54000.1 29.787 235 150 6 78 301 1 231 1.40e-27 109
Msa0410950 AT1G06650.1 33.180 217 132 5 43 252 64 274 4.16e-27 108
Msa0410950 AT5G63580.2 33.488 215 123 5 43 247 19 223 1.67e-26 105
Msa0410950 AT5G63580.1 33.488 215 123 5 43 247 19 223 2.28e-26 105
Msa0410950 AT5G43935.1 26.780 295 177 11 42 323 18 286 2.49e-26 106
Msa0410950 AT2G30840.2 31.982 222 137 7 43 256 57 272 7.05e-26 105
Msa0410950 AT1G78440.1 27.076 277 173 10 65 319 32 301 8.03e-26 105
Msa0410950 AT1G06640.3 33.486 218 130 7 43 252 64 274 2.69e-25 103
Msa0410950 AT1G06640.2 33.486 218 130 7 43 252 64 274 3.33e-25 103
Msa0410950 AT3G50210.4 30.182 275 166 8 52 303 27 298 4.77e-25 103
Msa0410950 AT3G50210.1 30.182 275 166 8 52 303 27 298 4.77e-25 103
Msa0410950 AT3G50210.3 30.182 275 166 8 52 303 27 298 4.77e-25 103
Msa0410950 AT1G30040.1 26.974 304 192 11 13 301 4 292 1.39e-24 102
Msa0410950 AT4G25420.2 28.986 207 135 3 42 236 60 266 1.89e-24 101
Msa0410950 AT2G19590.2 30.252 238 143 7 75 300 26 252 3.46e-24 100
Msa0410950 AT1G47990.1 28.923 325 187 12 32 330 3 309 1.74e-22 96.3
Msa0410950 AT5G51810.2 28.311 219 139 4 43 249 63 275 3.22e-22 95.1
Msa0410950 AT3G49630.3 27.612 268 174 6 60 309 30 295 6.06e-22 95.1
Msa0410950 AT3G49630.1 27.612 268 174 6 60 309 34 299 6.40e-22 95.1
Msa0410950 AT4G25310.2 27.914 326 190 12 17 332 27 317 9.38e-22 94.4
Msa0410950 AT2G34555.1 27.957 279 163 11 43 301 27 287 1.56e-20 91.3
Msa0410950 AT5G07480.2 28.977 176 116 5 127 295 25 198 6.43e-20 87.8
Msa0410950 AT4G23340.1 30.612 245 132 11 68 289 30 259 1.70e-19 88.2
Msa0410950 AT3G49620.1 27.273 264 171 7 59 303 58 319 1.06e-18 86.3
Msa0410950 AT1G02400.1 27.547 265 162 11 58 301 34 289 1.24e-18 85.5
Msa0410950 AT1G30040.2 27.200 250 154 10 13 249 4 238 2.02e-18 84.0
Msa0410950 AT4G25300.2 30.769 156 98 5 153 302 72 223 8.35e-18 82.4
Msa0410950 AT3G46490.1 25.253 297 183 7 43 307 12 301 9.54e-18 83.2
Msa0410950 AT1G50960.1 25.540 278 193 8 37 304 34 307 9.66e-18 83.2
Msa0410950 AT1G14130.1 27.715 267 171 10 43 300 9 262 4.00e-16 78.2
Msa0410950 AT3G46500.5 25.263 285 193 8 43 308 12 295 5.78e-16 77.8
Msa0410950 AT3G46490.2 25.267 281 171 7 43 291 12 285 1.14e-15 77.0
Msa0410950 AT1G35190.2 24.126 286 173 8 45 307 9 273 6.01e-14 72.0
Msa0410950 AT3G50210.2 31.138 167 108 3 144 303 50 216 1.43e-13 70.1
Msa0410950 AT1G35190.1 24.742 291 188 9 45 307 9 296 3.46e-13 69.7
Msa0410950 AT3G46500.7 24.535 269 183 8 43 292 12 279 4.97e-13 68.9
Msa0410950 AT1G02400.2 27.053 207 128 8 58 248 34 233 1.14e-12 67.8
Msa0410950 AT1G14120.2 25.758 264 176 8 40 295 5 256 1.24e-12 68.2
Msa0410950 AT1G14120.1 25.758 264 176 8 40 295 5 256 1.24e-12 68.2
Msa0410950 AT1G14120.3 25.758 264 176 8 40 295 5 256 1.24e-12 68.2
Msa0410950 AT4G16770.1 26.809 235 137 7 42 252 21 244 1.38e-12 67.4
Msa0410950 AT3G49630.2 30.178 169 113 4 144 309 60 226 1.41e-12 67.4
Msa0410950 AT5G51310.1 25.911 247 158 8 64 289 21 263 2.46e-12 67.4
Msa0410950 AT4G03070.1 24.715 263 156 9 60 298 33 277 3.16e-12 67.0

Find 97 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAATCTCTTTCTCTAAT+TGG 0.140674 3_2:-52917518 None:intergenic
TTTAACATTCACGACGTTAT+TGG 0.190740 3_2:-52919482 None:intergenic
CAGGATCAGTGTGTCGTTTC+AGG 0.214812 3_2:-52917748 None:intergenic
AGGTCAGGTTGAGGGCATTT+TGG 0.233663 3_2:-52917716 None:intergenic
TTGCAAAAGCTTGCGAGAAT+TGG 0.267028 3_2:+52916148 Msa0410950:CDS
TTCCATCCTTCTGGCTTGTC+TGG 0.271701 3_2:-52917548 None:intergenic
CTTGAGCAAAAGTGAATGTT+AGG 0.279746 3_2:+52919342 Msa0410950:exon
TTGCATCTGTTGCTGGATAT+TGG 0.281140 3_2:-52919224 None:intergenic
GTTACCTCTTTCCATCCTTC+TGG 0.281740 3_2:-52917557 None:intergenic
TGACATGTCTGGTGGTAAAA+AGG 0.287392 3_2:+52916278 Msa0410950:CDS
AACTGATTGTAAGAACCTTT+TGG 0.308496 3_2:-52916045 None:intergenic
GTTGTATGCTAAGATAGTTT+TGG 0.316989 3_2:+52919570 Msa0410950:three_prime_UTR
GACAAAAGCATGTGTTGATA+TGG 0.321789 3_2:+52917667 Msa0410950:CDS
AATAATCTCTTTCTCTAATT+GGG 0.336585 3_2:-52917517 None:intergenic
CGTGAATGTTAAACAATTGA+TGG 0.337419 3_2:+52919492 Msa0410950:three_prime_UTR
TATCAAATAATTTATAGATA+TGG 0.337926 3_2:+52919431 Msa0410950:three_prime_UTR
GCCGCCAACGTCGTCGATTC+CGG 0.339341 3_2:-52916100 None:intergenic
TGCAAAAGCTTGCGAGAATT+GGG 0.341720 3_2:+52916149 Msa0410950:CDS
AAGAATCTCATTCAAAGGTT+TGG 0.356999 3_2:-52919390 None:intergenic
ATCCATGAGAAGAACTTAAT+AGG 0.364724 3_2:-52919517 None:intergenic
TACACAATTGCATCTGTTGC+TGG 0.396791 3_2:-52919231 None:intergenic
CCCTTTCCATCCATTACAAA+TGG 0.408284 3_2:-52919703 None:intergenic
AATACTATTTCAGTTTGGTT+TGG 0.412480 3_2:-52919769 None:intergenic
GGTCGAATACTATTTCAGTT+TGG 0.413787 3_2:-52919774 None:intergenic
CTGAAACGACACACTGATCC+TGG 0.418531 3_2:+52917749 Msa0410950:CDS
TCTCCCTCTCTGACCTTCAA+AGG 0.423280 3_2:-52919255 None:intergenic
ATTCCGGCGAGAGAAATAAT+TGG 0.427584 3_2:-52916084 None:intergenic
CACTCGAGTCTAGTTTCATC+AGG 0.427976 3_2:+52916007 Msa0410950:CDS
TGCAATTGTGTACCCTTTGA+AGG 0.428183 3_2:+52919242 Msa0410950:CDS
ACAACAAAAGCACCTTCAAC+TGG 0.430334 3_2:-52917854 None:intergenic
ATCTTCCAAGTTGTTGATCA+TGG 0.430739 3_2:+52916174 Msa0410950:CDS
AGGGAGAAGAGATGAATGAT+TGG 0.431582 3_2:+52917468 Msa0410950:intron
ATCACTGTTCCTCCAGTTGA+AGG 0.435018 3_2:+52917842 Msa0410950:CDS
CCTCATCTCTAGTAACTTGA+AGG 0.438822 3_2:-52917808 None:intergenic
CCATTTGTAATGGATGGAAA+GGG 0.439511 3_2:+52919703 Msa0410950:three_prime_UTR
TAGCATACAACGAGAGTTTG+AGG 0.443805 3_2:-52919558 None:intergenic
GAGGTGTTATCTGAGGCTAT+GGG 0.447873 3_2:+52917626 Msa0410950:CDS
AAGCTTCGGTTTGACATGTC+TGG 0.449959 3_2:+52916267 Msa0410950:CDS
TGAGGTGTTATCTGAGGCTA+TGG 0.451886 3_2:+52917625 Msa0410950:CDS
GCATTTCCATTTGTAATGGA+TGG 0.456897 3_2:+52919697 Msa0410950:three_prime_UTR
TGCCACTAGAAGAGAAGCTT+CGG 0.463597 3_2:+52916253 Msa0410950:CDS
GGAATGTTGCTACGGATAAA+CGG 0.470067 3_2:-52919203 None:intergenic
TTAGAGAAAGAGATTATTCA+AGG 0.472643 3_2:+52917522 Msa0410950:CDS
CCTCAACCTGACCTTACTCT+TGG 0.478704 3_2:+52917725 Msa0410950:CDS
CTCCCTCTCTGACCTTCAAA+GGG 0.483986 3_2:-52919254 None:intergenic
TCCATTTGTAATGGATGGAA+AGG 0.489235 3_2:+52919702 Msa0410950:three_prime_UTR
CAAGAGTAAGGTCAGGTTGA+GGG 0.498972 3_2:-52917724 None:intergenic
GACGAAAGCACTCGTCCAAA+AGG 0.503109 3_2:+52916030 Msa0410950:CDS
TTTAACATGCAAGTTGTTTG+AGG 0.504827 3_2:+52917607 Msa0410950:CDS
GGGAGAGAAATATGTGATGG+AGG 0.506607 3_2:+52919272 Msa0410950:CDS
CCACACCATGATCAACAACT+TGG 0.509010 3_2:-52916179 None:intergenic
ATCCTATTAAGTTCTTCTCA+TGG 0.511522 3_2:+52919515 Msa0410950:three_prime_UTR
GTCGTTTCAGGCCAAGAGTA+AGG 0.513030 3_2:-52917736 None:intergenic
TGGATGGAAAGGGGTGTAAG+TGG 0.519581 3_2:+52919713 Msa0410950:three_prime_UTR
GGTTCAAAAGAGCTGATCAC+AGG 0.523724 3_2:+52919157 Msa0410950:CDS
GCCGGAATCGACGACGTTGG+CGG 0.525336 3_2:+52916099 Msa0410950:CDS
GGAAAGGGGTGTAAGTGGTT+CGG 0.534881 3_2:+52919718 Msa0410950:three_prime_UTR
AACACCAGAGTGATTGTGCC+AGG 0.538136 3_2:-52917767 None:intergenic
ATTCCAATTATTTCTCTCGC+CGG 0.539730 3_2:+52916081 Msa0410950:CDS
AGAGGGAGAGAAATATGTGA+TGG 0.544187 3_2:+52919269 Msa0410950:CDS
TTCAGGCCAAGAGTAAGGTC+AGG 0.545172 3_2:-52917731 None:intergenic
CCAAGAGTAAGGTCAGGTTG+AGG 0.550579 3_2:-52917725 None:intergenic
TAATCAAGAATCTCATTCAA+AGG 0.553373 3_2:-52919395 None:intergenic
TGCATGCAGTATTTAAGTAA+TGG 0.564893 3_2:+52919132 Msa0410950:intron
CTTCAAGTTACTAGAGATGA+GGG 0.575286 3_2:+52917809 Msa0410950:CDS
TGATATGGTTCAAAAGATTG+TGG 0.575423 3_2:+52917682 Msa0410950:CDS
TGCAGTATTTAAGTAATGGA+CGG 0.578042 3_2:+52919136 Msa0410950:intron
GGCCAGACAAGCCAGAAGGA+TGG 0.580441 3_2:+52917546 Msa0410950:CDS
GTTGTTTGAGGTGTTATCTG+AGG 0.584471 3_2:+52917619 Msa0410950:CDS
TGATCCTGGCACAATCACTC+TGG 0.585677 3_2:+52917763 Msa0410950:CDS
TTGAGCAAAAGTGAATGTTA+GGG 0.589568 3_2:+52919343 Msa0410950:exon
GAATGTTAGGGACCTGCAGA+AGG 0.592178 3_2:+52919355 Msa0410950:exon
CCAAGTTGTTGATCATGGTG+TGG 0.595100 3_2:+52916179 Msa0410950:CDS
CAAGCCAGAAGGATGGAAAG+AGG 0.596133 3_2:+52917553 Msa0410950:CDS
CCTTCAAGTTACTAGAGATG+AGG 0.598782 3_2:+52917808 Msa0410950:CDS
AGGTGTTATCTGAGGCTATG+GGG 0.601581 3_2:+52917627 Msa0410950:CDS
AAGAGCTGATCACAGGGCAG+TGG 0.603019 3_2:+52919164 Msa0410950:CDS
GCAAAAGCTTGCGAGAATTG+GGG 0.603339 3_2:+52916150 Msa0410950:CDS
TCTGGTGTTTCAAGAACAAG+TGG 0.603815 3_2:+52917781 Msa0410950:CDS
CATTTGTAATGGATGGAAAG+GGG 0.604149 3_2:+52919704 Msa0410950:three_prime_UTR
AACCGAAGCTTCTCTTCTAG+TGG 0.604976 3_2:-52916255 None:intergenic
TGTATATTTCAGCAAAAGTG+AGG 0.608415 3_2:-52919299 None:intergenic
TACCCTTTGAAGGTCAGAGA+GGG 0.609840 3_2:+52919252 Msa0410950:CDS
TGGATATTGGAATGTTGCTA+CGG 0.610921 3_2:-52919211 None:intergenic
CTAGAGATGAGGGTGAGACG+TGG 0.616545 3_2:+52917819 Msa0410950:CDS
GTTCAAAAGAGCTGATCACA+GGG 0.630306 3_2:+52919158 Msa0410950:CDS
CTTCGGTTTGACATGTCTGG+TGG 0.633367 3_2:+52916270 Msa0410950:CDS
AGGTGGCCAGACAAGCCAGA+AGG 0.645383 3_2:+52917542 Msa0410950:CDS
CTCGCCGGAATCGACGACGT+TGG 0.649120 3_2:+52916096 Msa0410950:CDS
ACAAAAGCACCTTCAACTGG+AGG 0.663056 3_2:-52917851 None:intergenic
GAGAAAGAGATTATTCAAGG+TGG 0.674799 3_2:+52917525 Msa0410950:CDS
ACTCGAGTCTAGTTTCATCA+GGG 0.678203 3_2:+52916008 Msa0410950:CDS
GTGTTTCAAGAACAAGTGGG+TGG 0.685189 3_2:+52917785 Msa0410950:CDS
AGCATTATACAAAAGCCAAG+AGG 0.697704 3_2:+52915895 Msa0410950:five_prime_UTR
GTACCCTTTGAAGGTCAGAG+AGG 0.744630 3_2:+52919251 Msa0410950:CDS
CTGGTGTTTCAAGAACAAGT+GGG 0.745352 3_2:+52917782 Msa0410950:CDS
GGTCGCAAATTTCTACTCTG+CGG 0.749208 3_2:-52916122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAAAAATTATTTTTGAAT+TGG + chr3_2:52917196-52917215 Msa0410950:intron 10.0%
!! TAATTCAATGTTTATTATTT+CGG - chr3_2:52917247-52917266 None:intergenic 10.0%
!! ATAATAAACATTGAATTATA+AGG + chr3_2:52917249-52917268 Msa0410950:intron 10.0%
!!! ATTCTAAAATTTTCTTTTAT+TGG - chr3_2:52917331-52917350 None:intergenic 10.0%
!! AAACAAAAAAATAAAATTGA+TGG + chr3_2:52918312-52918331 Msa0410950:intron 10.0%
!! TATCAAATAATTTATAGATA+TGG + chr3_2:52919431-52919450 Msa0410950:three_prime_UTR 10.0%
!! AAAATACTAGTTATAAACAT+AGG + chr3_2:52916508-52916527 Msa0410950:intron 15.0%
!!! AAATTTTCTTTTATTGGTAA+AGG - chr3_2:52917325-52917344 None:intergenic 15.0%
!!! TTTTTTTTTTACCAACTATA+TGG + chr3_2:52918025-52918044 Msa0410950:intron 15.0%
!! TTGTCAAAAAATAATAATTC+AGG - chr3_2:52918618-52918637 None:intergenic 15.0%
!!! TTATTTTTTGACAAAAATGT+AGG + chr3_2:52918624-52918643 Msa0410950:intron 15.0%
!!! TTTTTAAAGTCTAATAATTC+AGG - chr3_2:52918746-52918765 None:intergenic 15.0%
!!! TTAAGTTTTCATATACTATT+TGG + chr3_2:52918841-52918860 Msa0410950:intron 15.0%
!!! ACGTTTCAATGTTTTTTTTT+TGG - chr3_2:52915923-52915942 None:intergenic 20.0%
!! AAATTGATAAATACATCTCA+AGG - chr3_2:52916638-52916657 None:intergenic 20.0%
!! ATATCATTAATTGATTGATG+TGG + chr3_2:52916724-52916743 Msa0410950:intron 20.0%
!! ACAATATTAATCAAGACTAA+TGG - chr3_2:52916808-52916827 None:intergenic 20.0%
!! CTTGATTAATATTGTGTATT+TGG + chr3_2:52916813-52916832 Msa0410950:intron 20.0%
!!! CACAAAATAAGTTCTAATTA+CGG + chr3_2:52916883-52916902 Msa0410950:intron 20.0%
!!! AACTGATTCATCTTTAAAAT+TGG - chr3_2:52917148-52917167 None:intergenic 20.0%
!!! ATTTTAAAGATGAATCAGTT+AGG + chr3_2:52917148-52917167 Msa0410950:intron 20.0%
!!! CATGTGTAAATATTTTTGAA+TGG - chr3_2:52917300-52917319 None:intergenic 20.0%
!! ATCCAATATATAAGTAGTTT+GGG - chr3_2:52917437-52917456 None:intergenic 20.0%
!! AATAATCTCTTTCTCTAATT+GGG - chr3_2:52917520-52917539 None:intergenic 20.0%
!!! TGACAAATTGTTTTAAATTG+TGG - chr3_2:52918150-52918169 None:intergenic 20.0%
!! TATTATTGTACTTATGATGT+AGG + chr3_2:52918224-52918243 Msa0410950:intron 20.0%
!! TAGTAAAATGAACCTATTAA+AGG + chr3_2:52918356-52918375 Msa0410950:intron 20.0%
!! AAGAAAAATGAGTTTAATGA+GGG - chr3_2:52918399-52918418 None:intergenic 20.0%
!! AAAGAAAAATGAGTTTAATG+AGG - chr3_2:52918400-52918419 None:intergenic 20.0%
!!! TTATTCAATGACAAGTTTTT+TGG - chr3_2:52918559-52918578 None:intergenic 20.0%
!! TGTCATTGAATAAATACAAT+AGG + chr3_2:52918566-52918585 Msa0410950:intron 20.0%
!!! ATGACAAGTTTTTTGTTTTT+CGG - chr3_2:52918680-52918699 None:intergenic 20.0%
!! TGTCATTGAATAAATACAAT+AGG + chr3_2:52918566-52918585 Msa0410950:intron 20.0%
!!! CAAGTTTGTTTTTTGTTTTT+TGG - chr3_2:52918787-52918806 None:intergenic 20.0%
!!! TCATTATTTTAAGAAGTGTT+GGG + chr3_2:52918919-52918938 Msa0410950:intron 20.0%
!! AGATGACAAGTTTTTCTAAA+GGG + chr3_2:52916220-52916239 Msa0410950:CDS 25.0%
! AACAAGTGATAACTACAAAA+TGG - chr3_2:52916488-52916507 None:intergenic 25.0%
! ATACTAGTTATAAACATAGG+CGG + chr3_2:52916511-52916530 Msa0410950:intron 25.0%
! ATCTGGACTAAAAAATAAGT+TGG + chr3_2:52916534-52916553 Msa0410950:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG - chr3_2:52916599-52916618 None:intergenic 25.0%
!!! TGTGTATTTGGTTCAATTTT+CGG + chr3_2:52916825-52916844 Msa0410950:intron 25.0%
! TGAGTTAGTTGAAAACATAA+TGG + chr3_2:52917120-52917139 Msa0410950:intron 25.0%
! GATCCAATATATAAGTAGTT+TGG - chr3_2:52917438-52917457 None:intergenic 25.0%
! GAATAATCTCTTTCTCTAAT+TGG - chr3_2:52917521-52917540 None:intergenic 25.0%
! TTAGAGAAAGAGATTATTCA+AGG + chr3_2:52917522-52917541 Msa0410950:CDS 25.0%
!! GCAATTTAAAACCATATAGT+TGG - chr3_2:52918039-52918058 None:intergenic 25.0%
!!! ATGGTTTTAAATTGCAATTG+AGG + chr3_2:52918044-52918063 Msa0410950:intron 25.0%
! TTGTGGTAAGAACAATAATT+GGG - chr3_2:52918133-52918152 None:intergenic 25.0%
! ATTGTGGTAAGAACAATAAT+TGG - chr3_2:52918134-52918153 None:intergenic 25.0%
!!! TTTTTAAAGCCTAAAGATTC+AGG - chr3_2:52918251-52918270 None:intergenic 25.0%
!! TTGTTTCTTACATTTGAAAC+CGG - chr3_2:52918298-52918317 None:intergenic 25.0%
! CAAGATTTGCCAAAATAAAT+TGG - chr3_2:52918883-52918902 None:intergenic 25.0%
!!! CTCATTATTTTAAGAAGTGT+TGG + chr3_2:52918918-52918937 Msa0410950:intron 25.0%
! TAATCAAGAATCTCATTCAA+AGG - chr3_2:52919398-52919417 None:intergenic 25.0%
!! TTGTATGCTAAGATAGTTTT+GGG + chr3_2:52919571-52919590 Msa0410950:three_prime_UTR 25.0%
!! TTTTGCATTTCCATTTGTAA+TGG + chr3_2:52919693-52919712 Msa0410950:three_prime_UTR 25.0%
!! GTTTAGACTTTCAATTTTGT+CGG - chr3_2:52919750-52919769 None:intergenic 25.0%
! AATACTATTTCAGTTTGGTT+TGG - chr3_2:52919772-52919791 None:intergenic 25.0%
!!! GTTTTTTTTTTGGTTCCTCT+TGG - chr3_2:52915913-52915932 None:intergenic 30.0%
! CTAACTTTTCATGCAAACAA+TGG + chr3_2:52915945-52915964 Msa0410950:exon 30.0%
! AACTGATTGTAAGAACCTTT+TGG - chr3_2:52916048-52916067 None:intergenic 30.0%
! GAGATGACAAGTTTTTCTAA+AGG + chr3_2:52916219-52916238 Msa0410950:CDS 30.0%
! TTTCACACACTTGCATTTTT+AGG + chr3_2:52916353-52916372 Msa0410950:intron 30.0%
! TTCACACACTTGCATTTTTA+GGG + chr3_2:52916354-52916373 Msa0410950:intron 30.0%
! GTATTTTGCGAGTTACATTT+TGG + chr3_2:52916378-52916397 Msa0410950:intron 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG + chr3_2:52916593-52916612 Msa0410950:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG - chr3_2:52916600-52916619 None:intergenic 30.0%
! CACTTACAAGTTTTTATGTG+CGG - chr3_2:52916685-52916704 None:intergenic 30.0%
! AATAAGTTCTAATTACGGAC+AGG + chr3_2:52916888-52916907 Msa0410950:intron 30.0%
! ATAAGTTCTAATTACGGACA+GGG + chr3_2:52916889-52916908 Msa0410950:intron 30.0%
! GTAGACTTTTCTCTTCAAAT+GGG + chr3_2:52916951-52916970 Msa0410950:intron 30.0%
TAAAGATGAATCAGTTAGGT+TGG + chr3_2:52917152-52917171 Msa0410950:intron 30.0%
AAAGATGAATCAGTTAGGTT+GGG + chr3_2:52917153-52917172 Msa0410950:intron 30.0%
!! TATTTTTGAATGGCTCATAC+TGG - chr3_2:52917290-52917309 None:intergenic 30.0%
CACCCAAACTACTTATATAT+TGG + chr3_2:52917432-52917451 Msa0410950:intron 30.0%
ATATTGGATCTCCTATTTAC+AGG + chr3_2:52917448-52917467 Msa0410950:intron 30.0%
TATTGGATCTCCTATTTACA+GGG + chr3_2:52917449-52917468 Msa0410950:intron 30.0%
TTTAACATGCAAGTTGTTTG+AGG + chr3_2:52917607-52917626 Msa0410950:CDS 30.0%
TGATATGGTTCAAAAGATTG+TGG + chr3_2:52917682-52917701 Msa0410950:CDS 30.0%
TTGAGGTCATAATGTAGTTA+AGG + chr3_2:52918061-52918080 Msa0410950:intron 30.0%
! TTGCGAATTTTACCGTATTA+GGG - chr3_2:52918091-52918110 None:intergenic 30.0%
! ATTGCGAATTTTACCGTATT+AGG - chr3_2:52918092-52918111 None:intergenic 30.0%
! TTTCAATTTTACCCTTGTCT+TGG - chr3_2:52918438-52918457 None:intergenic 30.0%
AAAACTTAATTCACGAGCTA+TGG - chr3_2:52918830-52918849 None:intergenic 30.0%
! TCACATGGTCCAATTTATTT+TGG + chr3_2:52918871-52918890 Msa0410950:intron 30.0%
!! ACATATTATTAATTTGCGCG+TGG + chr3_2:52919109-52919128 Msa0410950:intron 30.0%
TGCATGCAGTATTTAAGTAA+TGG + chr3_2:52919132-52919151 Msa0410950:intron 30.0%
! TGCAGTATTTAAGTAATGGA+CGG + chr3_2:52919136-52919155 Msa0410950:intron 30.0%
TGTATATTTCAGCAAAAGTG+AGG - chr3_2:52919302-52919321 None:intergenic 30.0%
! CTTTTGCTGAAATATACAGA+AGG + chr3_2:52919304-52919323 Msa0410950:CDS 30.0%
TTGAGCAAAAGTGAATGTTA+GGG + chr3_2:52919343-52919362 Msa0410950:exon 30.0%
AAGAATCTCATTCAAAGGTT+TGG - chr3_2:52919393-52919412 None:intergenic 30.0%
TTTAACATTCACGACGTTAT+TGG - chr3_2:52919485-52919504 None:intergenic 30.0%
CGTGAATGTTAAACAATTGA+TGG + chr3_2:52919492-52919511 Msa0410950:three_prime_UTR 30.0%
ATCCTATTAAGTTCTTCTCA+TGG + chr3_2:52919515-52919534 Msa0410950:three_prime_UTR 30.0%
ATCCATGAGAAGAACTTAAT+AGG - chr3_2:52919520-52919539 None:intergenic 30.0%
! GTTGTATGCTAAGATAGTTT+TGG + chr3_2:52919570-52919589 Msa0410950:three_prime_UTR 30.0%
!!! TTTGTCCCTTTTTTTGATGT+TGG + chr3_2:52919631-52919650 Msa0410950:three_prime_UTR 30.0%
GAGAACCAACATCAAAAAAA+GGG - chr3_2:52919639-52919658 None:intergenic 30.0%
AGAGAACCAACATCAAAAAA+AGG - chr3_2:52919640-52919659 None:intergenic 30.0%
!! CTTGGCTTTTGTATAATGCT+CGG - chr3_2:52915895-52915914 None:intergenic 35.0%
AGCATTATACAAAAGCCAAG+AGG + chr3_2:52915895-52915914 Msa0410950:five_prime_UTR 35.0%
! AAATAATCGAGAGTTTTCGC+TGG - chr3_2:52915973-52915992 None:intergenic 35.0%
! ATTCCAATTATTTCTCTCGC+CGG + chr3_2:52916081-52916100 Msa0410950:CDS 35.0%
ATCTTCCAAGTTGTTGATCA+TGG + chr3_2:52916174-52916193 Msa0410950:CDS 35.0%
ACTTCCACGTAAAAACTAGT+TGG - chr3_2:52916445-52916464 None:intergenic 35.0%
!!! TTACGTGGAAGTGTTTTACT+AGG + chr3_2:52916453-52916472 Msa0410950:intron 35.0%
GTATTCTAGTAGATGTCTGT+AGG + chr3_2:52916558-52916577 Msa0410950:intron 35.0%
! CGTAGACTTTTCTCTTCAAA+TGG + chr3_2:52916950-52916969 Msa0410950:intron 35.0%
!! TTTGAAGAGAAAGTGTTGGT+TGG - chr3_2:52917005-52917024 None:intergenic 35.0%
! CTCATTTGAAGAGAAAGTGT+TGG - chr3_2:52917009-52917028 None:intergenic 35.0%
ACACTTTCTCTTCAAATGAG+AGG + chr3_2:52917009-52917028 Msa0410950:intron 35.0%
AGAGGACTAGATTTCTCAAA+TGG + chr3_2:52917027-52917046 Msa0410950:intron 35.0%
GAGGACTAGATTTCTCAAAT+GGG + chr3_2:52917028-52917047 Msa0410950:intron 35.0%
! AAGATGAATCAGTTAGGTTG+GGG + chr3_2:52917154-52917173 Msa0410950:intron 35.0%
GAGAAAGAGATTATTCAAGG+TGG + chr3_2:52917525-52917544 Msa0410950:CDS 35.0%
! GACAAAAGCATGTGTTGATA+TGG + chr3_2:52917667-52917686 Msa0410950:CDS 35.0%
! CTTCAAGTTACTAGAGATGA+GGG + chr3_2:52917809-52917828 Msa0410950:CDS 35.0%
!! GGTGCTTTTGTTGTCAATAT+TGG + chr3_2:52917863-52917882 Msa0410950:intron 35.0%
GTTGTCAATATTGGAGATCA+TGG + chr3_2:52917872-52917891 Msa0410950:intron 35.0%
AGTTAAGGTGAACCCTAATA+CGG + chr3_2:52918076-52918095 Msa0410950:intron 35.0%
TACGGTAAAATTCGCAATGT+CGG + chr3_2:52918094-52918113 Msa0410950:intron 35.0%
CATTTAAATTGCACTTCCTC+CGG + chr3_2:52918276-52918295 Msa0410950:intron 35.0%
! TTTCTTACATTTGAAACCGG+AGG - chr3_2:52918295-52918314 None:intergenic 35.0%
TTGGAATTGTGGCCTTTAAT+AGG - chr3_2:52918371-52918390 None:intergenic 35.0%
GAGTTTAATGAGGGTAAACT+TGG - chr3_2:52918390-52918409 None:intergenic 35.0%
! TTGTGTCTTACATTTGAGAC+CGG + chr3_2:52918525-52918544 Msa0410950:intron 35.0%
TAGTTCGTGAACTATGATGT+AGG + chr3_2:52918591-52918610 Msa0410950:intron 35.0%
TAGCTCGTGAATTATGATGT+AGG + chr3_2:52918719-52918738 Msa0410950:intron 35.0%
CTATTTGGTCATACTTCACA+TGG + chr3_2:52918856-52918875 Msa0410950:intron 35.0%
!! ACGTAGTATTGACGAAAAGA+CGG - chr3_2:52919049-52919068 None:intergenic 35.0%
TGGATATTGGAATGTTGCTA+CGG - chr3_2:52919214-52919233 None:intergenic 35.0%
!! CTAACATTCACTTTTGCTCA+AGG - chr3_2:52919344-52919363 None:intergenic 35.0%
CTTGAGCAAAAGTGAATGTT+AGG + chr3_2:52919342-52919361 Msa0410950:exon 35.0%
!!! TATGCTAAGATAGTTTTGGG+TGG + chr3_2:52919574-52919593 Msa0410950:three_prime_UTR 35.0%
! GCATTTCCATTTGTAATGGA+TGG + chr3_2:52919697-52919716 Msa0410950:three_prime_UTR 35.0%
!! TCCATTTGTAATGGATGGAA+AGG + chr3_2:52919702-52919721 Msa0410950:three_prime_UTR 35.0%
!! CCATTTGTAATGGATGGAAA+GGG + chr3_2:52919703-52919722 Msa0410950:three_prime_UTR 35.0%
!! CATTTGTAATGGATGGAAAG+GGG + chr3_2:52919704-52919723 Msa0410950:three_prime_UTR 35.0%
GGTCGAATACTATTTCAGTT+TGG - chr3_2:52919777-52919796 None:intergenic 35.0%
! ACTCGAGTCTAGTTTCATCA+GGG + chr3_2:52916008-52916027 Msa0410950:CDS 40.0%
ATTCCGGCGAGAGAAATAAT+TGG - chr3_2:52916087-52916106 None:intergenic 40.0%
TTGCAAAAGCTTGCGAGAAT+TGG + chr3_2:52916148-52916167 Msa0410950:CDS 40.0%
TGCAAAAGCTTGCGAGAATT+GGG + chr3_2:52916149-52916168 Msa0410950:CDS 40.0%
TGACATGTCTGGTGGTAAAA+AGG + chr3_2:52916278-52916297 Msa0410950:CDS 40.0%
GACATGTCTGGTGGTAAAAA+GGG + chr3_2:52916279-52916298 Msa0410950:CDS 40.0%
!! TTGCGAGTTACATTTTGGAG+CGG + chr3_2:52916383-52916402 Msa0410950:intron 40.0%
!!! CACACCAACTAGTTTTTACG+TGG + chr3_2:52916438-52916457 Msa0410950:intron 40.0%
GTTATAAACATAGGCGGATC+TGG + chr3_2:52916517-52916536 Msa0410950:intron 40.0%
! TGACACACCGACATTGATTA+GGG - chr3_2:52916916-52916935 None:intergenic 40.0%
AATGGGTCCCTACTTTGTTA+TGG + chr3_2:52917045-52917064 Msa0410950:intron 40.0%
GGTTCCACCATAACAAAGTA+GGG - chr3_2:52917055-52917074 None:intergenic 40.0%
AGGTTCCACCATAACAAAGT+AGG - chr3_2:52917056-52917075 None:intergenic 40.0%
! CTTTGTTATGGTGGAACCTT+TGG + chr3_2:52917057-52917076 Msa0410950:intron 40.0%
!! AGATGAATCAGTTAGGTTGG+GGG + chr3_2:52917155-52917174 Msa0410950:intron 40.0%
CATCTCTTCTCCCTGTAAAT+AGG - chr3_2:52917462-52917481 None:intergenic 40.0%
AGGGAGAAGAGATGAATGAT+TGG + chr3_2:52917468-52917487 Msa0410950:intron 40.0%
! GTTGTTTGAGGTGTTATCTG+AGG + chr3_2:52917619-52917638 Msa0410950:CDS 40.0%
TCTGGTGTTTCAAGAACAAG+TGG + chr3_2:52917781-52917800 Msa0410950:CDS 40.0%
CTGGTGTTTCAAGAACAAGT+GGG + chr3_2:52917782-52917801 Msa0410950:CDS 40.0%
CCTCATCTCTAGTAACTTGA+AGG - chr3_2:52917811-52917830 None:intergenic 40.0%
! CCTTCAAGTTACTAGAGATG+AGG + chr3_2:52917808-52917827 Msa0410950:CDS 40.0%
!! ACAACAAAAGCACCTTCAAC+TGG - chr3_2:52917857-52917876 None:intergenic 40.0%
AAACCTTATCCCGCTAGATA+GGG - chr3_2:52917953-52917972 None:intergenic 40.0%
ACGGTAAAATTCGCAATGTC+GGG + chr3_2:52918095-52918114 Msa0410950:intron 40.0%
GATGTAGGTCCTGAATCTTT+AGG + chr3_2:52918239-52918258 Msa0410950:intron 40.0%
TGAGGGTAAACTTGGAATTG+TGG - chr3_2:52918382-52918401 None:intergenic 40.0%
TCTCTACTACTCCAAGACAA+GGG + chr3_2:52918424-52918443 Msa0410950:intron 40.0%
ATGCACGCATAGTAAGAAAG+TGG - chr3_2:52918498-52918517 None:intergenic 40.0%
!!! AAGTTTTTTGGTACTCCCTC+CGG - chr3_2:52918547-52918566 None:intergenic 40.0%
GTTCAAAAGAGCTGATCACA+GGG + chr3_2:52919158-52919177 Msa0410950:CDS 40.0%
GGAATGTTGCTACGGATAAA+CGG - chr3_2:52919206-52919225 None:intergenic 40.0%
TTGCATCTGTTGCTGGATAT+TGG - chr3_2:52919227-52919246 None:intergenic 40.0%
TACACAATTGCATCTGTTGC+TGG - chr3_2:52919234-52919253 None:intergenic 40.0%
TGCAATTGTGTACCCTTTGA+AGG + chr3_2:52919242-52919261 Msa0410950:CDS 40.0%
AGAGGGAGAGAAATATGTGA+TGG + chr3_2:52919269-52919288 Msa0410950:CDS 40.0%
TAGCATACAACGAGAGTTTG+AGG - chr3_2:52919561-52919580 None:intergenic 40.0%
CCCTTTCCATCCATTACAAA+TGG - chr3_2:52919706-52919725 None:intergenic 40.0%
! GACTCGAGTGTGTTTTTCTG+AGG - chr3_2:52915997-52916016 None:intergenic 45.0%
! CACTCGAGTCTAGTTTCATC+AGG + chr3_2:52916007-52916026 Msa0410950:CDS 45.0%
GGTCGCAAATTTCTACTCTG+CGG - chr3_2:52916125-52916144 None:intergenic 45.0%
! TCTCGCAAGCTTTTGCAATC+TGG - chr3_2:52916146-52916165 None:intergenic 45.0%
GCAAAAGCTTGCGAGAATTG+GGG + chr3_2:52916150-52916169 Msa0410950:CDS 45.0%
CCACACCATGATCAACAACT+TGG - chr3_2:52916182-52916201 None:intergenic 45.0%
CCAAGTTGTTGATCATGGTG+TGG + chr3_2:52916179-52916198 Msa0410950:CDS 45.0%
TGCCACTAGAAGAGAAGCTT+CGG + chr3_2:52916253-52916272 Msa0410950:CDS 45.0%
AACCGAAGCTTCTCTTCTAG+TGG - chr3_2:52916258-52916277 None:intergenic 45.0%
! AAGCTTCGGTTTGACATGTC+TGG + chr3_2:52916267-52916286 Msa0410950:CDS 45.0%
ATGTCTGGTGGTAAAAAGGG+TGG + chr3_2:52916282-52916301 Msa0410950:CDS 45.0%
!!! ATTTTGGAGCGGAAAGCCAT+TGG + chr3_2:52916394-52916413 Msa0410950:intron 45.0%
AGACACACTTAACCCTCCAA+TGG - chr3_2:52916413-52916432 None:intergenic 45.0%
ACAGGGTCCCTAATCAATGT+CGG + chr3_2:52916906-52916925 Msa0410950:intron 45.0%
! GTGACACACCGACATTGATT+AGG - chr3_2:52916917-52916936 None:intergenic 45.0%
!! GATGAATCAGTTAGGTTGGG+GGG + chr3_2:52917156-52917175 Msa0410950:intron 45.0%
GTTACCTCTTTCCATCCTTC+TGG - chr3_2:52917560-52917579 None:intergenic 45.0%
! TGAGGTGTTATCTGAGGCTA+TGG + chr3_2:52917625-52917644 Msa0410950:CDS 45.0%
! GAGGTGTTATCTGAGGCTAT+GGG + chr3_2:52917626-52917645 Msa0410950:CDS 45.0%
! AGGTGTTATCTGAGGCTATG+GGG + chr3_2:52917627-52917646 Msa0410950:CDS 45.0%
!! CAAGAGTAAGGTCAGGTTGA+GGG - chr3_2:52917727-52917746 None:intergenic 45.0%
GTGTTTCAAGAACAAGTGGG+TGG + chr3_2:52917785-52917804 Msa0410950:CDS 45.0%
ATCACTGTTCCTCCAGTTGA+AGG + chr3_2:52917842-52917861 Msa0410950:CDS 45.0%
!! ACAAAAGCACCTTCAACTGG+AGG - chr3_2:52917854-52917873 None:intergenic 45.0%
CAAACCTTATCCCGCTAGAT+AGG - chr3_2:52917954-52917973 None:intergenic 45.0%
CGGTAAAATTCGCAATGTCG+GGG + chr3_2:52918096-52918115 Msa0410950:intron 45.0%
GTCTCTACTACTCCAAGACA+AGG + chr3_2:52918423-52918442 Msa0410950:intron 45.0%
! TGTCTTACATTTGAGACCGG+AGG + chr3_2:52918528-52918547 Msa0410950:intron 45.0%
! GTCTTACATTTGAGACCGGA+GGG + chr3_2:52918529-52918548 Msa0410950:intron 45.0%
GGTTCAAAAGAGCTGATCAC+AGG + chr3_2:52919157-52919176 Msa0410950:CDS 45.0%
! TACCCTTTGAAGGTCAGAGA+GGG + chr3_2:52919252-52919271 Msa0410950:CDS 45.0%
GGGAGAGAAATATGTGATGG+AGG + chr3_2:52919272-52919291 Msa0410950:CDS 45.0%
! CCTCAATTTTTGCCTTCTGC+AGG - chr3_2:52919370-52919389 None:intergenic 45.0%
CCTGCAGAAGGCAAAAATTG+AGG + chr3_2:52919367-52919386 Msa0410950:three_prime_UTR 45.0%
!!! TAGTTTTGGGTGGAGCTTCT+TGG + chr3_2:52919584-52919603 Msa0410950:three_prime_UTR 45.0%
!!! AAATTTTAGAATAATAAAAT+TGG + chr3_2:52917339-52917358 Msa0410950:intron 5.0%
!!! TTTTTATAATAACTTAAATA+TGG + chr3_2:52918467-52918486 Msa0410950:intron 5.0%
!! GACGAAAGCACTCGTCCAAA+AGG + chr3_2:52916030-52916049 Msa0410950:CDS 50.0%
! CTTCGGTTTGACATGTCTGG+TGG + chr3_2:52916270-52916289 Msa0410950:CDS 50.0%
! GGGTCCCTACTTTGTTATGG+TGG + chr3_2:52917048-52917067 Msa0410950:intron 50.0%
! GTTATGGTGGAACCTTTGGC+TGG + chr3_2:52917061-52917080 Msa0410950:intron 50.0%
!! AATCAGTTAGGTTGGGGGGA+AGG + chr3_2:52917160-52917179 Msa0410950:intron 50.0%
!! TTCCATCCTTCTGGCTTGTC+TGG - chr3_2:52917551-52917570 None:intergenic 50.0%
CAAGCCAGAAGGATGGAAAG+AGG + chr3_2:52917553-52917572 Msa0410950:CDS 50.0%
!!! GGTCAGGTTGAGGGCATTTT+GGG - chr3_2:52917718-52917737 None:intergenic 50.0%
!!! AGGTCAGGTTGAGGGCATTT+TGG - chr3_2:52917719-52917738 None:intergenic 50.0%
! CCAAGAGTAAGGTCAGGTTG+AGG - chr3_2:52917728-52917747 None:intergenic 50.0%
CCTCAACCTGACCTTACTCT+TGG + chr3_2:52917725-52917744 Msa0410950:CDS 50.0%
TTCAGGCCAAGAGTAAGGTC+AGG - chr3_2:52917734-52917753 None:intergenic 50.0%
GTCGTTTCAGGCCAAGAGTA+AGG - chr3_2:52917739-52917758 None:intergenic 50.0%
!! CAGGATCAGTGTGTCGTTTC+AGG - chr3_2:52917751-52917770 None:intergenic 50.0%
CTGAAACGACACACTGATCC+TGG + chr3_2:52917749-52917768 Msa0410950:CDS 50.0%
TGATCCTGGCACAATCACTC+TGG + chr3_2:52917763-52917782 Msa0410950:CDS 50.0%
AACACCAGAGTGATTGTGCC+AGG - chr3_2:52917770-52917789 None:intergenic 50.0%
ATGTAGCCGACCCTATCTAG+CGG + chr3_2:52917940-52917959 Msa0410950:intron 50.0%
CTTATCCCGCTAGATAGGGT+CGG - chr3_2:52917949-52917968 None:intergenic 50.0%
! GTACCCTTTGAAGGTCAGAG+AGG + chr3_2:52919251-52919270 Msa0410950:CDS 50.0%
CTCCCTCTCTGACCTTCAAA+GGG - chr3_2:52919257-52919276 None:intergenic 50.0%
TCTCCCTCTCTGACCTTCAA+AGG - chr3_2:52919258-52919277 None:intergenic 50.0%
GAATGTTAGGGACCTGCAGA+AGG + chr3_2:52919355-52919374 Msa0410950:exon 50.0%
! TGGATGGAAAGGGGTGTAAG+TGG + chr3_2:52919713-52919732 Msa0410950:three_prime_UTR 50.0%
! GGAAAGGGGTGTAAGTGGTT+CGG + chr3_2:52919718-52919737 Msa0410950:three_prime_UTR 50.0%
TTGGAGCGGAAAGCCATTGG+AGG + chr3_2:52916397-52916416 Msa0410950:intron 55.0%
TGGAGCGGAAAGCCATTGGA+GGG + chr3_2:52916398-52916417 Msa0410950:intron 55.0%
! ATGGTGGAACCTTTGGCTGG+AGG + chr3_2:52917064-52917083 Msa0410950:intron 55.0%
TGGTGGAACCTTTGGCTGGA+GGG + chr3_2:52917065-52917084 Msa0410950:intron 55.0%
CTAGAGATGAGGGTGAGACG+TGG + chr3_2:52917819-52917838 Msa0410950:CDS 55.0%
GCTAGATAGGGTCGGCTACA+TGG - chr3_2:52917941-52917960 None:intergenic 55.0%
TGTAGCCGACCCTATCTAGC+GGG + chr3_2:52917941-52917960 Msa0410950:intron 55.0%
CGACCCTATCTAGCGGGATA+AGG + chr3_2:52917947-52917966 Msa0410950:intron 55.0%
AAGAGCTGATCACAGGGCAG+TGG + chr3_2:52919164-52919183 Msa0410950:CDS 55.0%
GGTGGAACCTTTGGCTGGAG+GGG + chr3_2:52917066-52917085 Msa0410950:intron 60.0%
GTGGAACCTTTGGCTGGAGG+GGG + chr3_2:52917067-52917086 Msa0410950:intron 60.0%
AAGACTCCCCCTCCAGCCAA+AGG - chr3_2:52917076-52917095 None:intergenic 60.0%
!! CAGTTAGGTTGGGGGGAAGG+CGG + chr3_2:52917163-52917182 Msa0410950:intron 60.0%
!! AGTTAGGTTGGGGGGAAGGC+GGG + chr3_2:52917164-52917183 Msa0410950:intron 60.0%
AGGTGGCCAGACAAGCCAGA+AGG + chr3_2:52917542-52917561 Msa0410950:CDS 60.0%
GGCCAGACAAGCCAGAAGGA+TGG + chr3_2:52917546-52917565 Msa0410950:CDS 60.0%
CTCGCCGGAATCGACGACGT+TGG + chr3_2:52916096-52916115 Msa0410950:CDS 65.0%
GCCGGAATCGACGACGTTGG+CGG + chr3_2:52916099-52916118 Msa0410950:CDS 65.0%
!! GCCGCCAACGTCGTCGATTC+CGG - chr3_2:52916103-52916122 None:intergenic 65.0%
!! GTTAGGTTGGGGGGAAGGCG+GGG + chr3_2:52917165-52917184 Msa0410950:intron 65.0%
!! TTAGGTTGGGGGGAAGGCGG+GGG + chr3_2:52917166-52917185 Msa0410950:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 52915874 52919796 52915874 ID=Msa0410950;Name=Msa0410950
chr3_2 mRNA 52915874 52919796 52915874 ID=Msa0410950-mRNA-1;Parent=Msa0410950;Name=Msa0410950-mRNA-1;_AED=0.10;_eAED=0.11;_QI=81|0.33|0.5|1|1|1|4|440|332
chr3_2 exon 52915874 52916314 52915874 ID=Msa0410950-mRNA-1:exon:10513;Parent=Msa0410950-mRNA-1
chr3_2 exon 52917470 52917863 52917470 ID=Msa0410950-mRNA-1:exon:10514;Parent=Msa0410950-mRNA-1
chr3_2 exon 52918613 52918641 52918613 ID=Msa0410950-mRNA-1:exon:10515;Parent=Msa0410950-mRNA-1
chr3_2 exon 52919141 52919796 52919141 ID=Msa0410950-mRNA-1:exon:10516;Parent=Msa0410950-mRNA-1
chr3_2 five_prime_UTR 52915874 52915954 52915874 ID=Msa0410950-mRNA-1:five_prime_utr;Parent=Msa0410950-mRNA-1
chr3_2 CDS 52915955 52916314 52915955 ID=Msa0410950-mRNA-1:cds;Parent=Msa0410950-mRNA-1
chr3_2 CDS 52917470 52917863 52917470 ID=Msa0410950-mRNA-1:cds;Parent=Msa0410950-mRNA-1
chr3_2 CDS 52918613 52918641 52918613 ID=Msa0410950-mRNA-1:cds;Parent=Msa0410950-mRNA-1
chr3_2 CDS 52919141 52919356 52919141 ID=Msa0410950-mRNA-1:cds;Parent=Msa0410950-mRNA-1
chr3_2 three_prime_UTR 52919357 52919796 52919357 ID=Msa0410950-mRNA-1:three_prime_utr;Parent=Msa0410950-mRNA-1
Gene Sequence

>Msa0410950

ATGCAAACAATGGCACCAGCGAAAACTCTCGATTATTTACCTCAGAAAAACACACTCGAGTCTAGTTTCATCAGGGACGAAAGCACTCGTCCAAAAGGTTCTTACAATCAGTTCAGCAATGATGAGATTCCAATTATTTCTCTCGCCGGAATCGACGACGTTGGCGGCCGCAGAGTAGAAATTTGCGACCAGATTGCAAAAGCTTGCGAGAATTGGGGTATCTTCCAAGTTGTTGATCATGGTGTGGATCAAAAGCTCATTTATGAGATGACAAGTTTTTCTAAAGGGTTCTTTGATTTGCCACTAGAAGAGAAGCTTCGGTTTGACATGTCTGGTGGTAAAAAGGGTGGCTTCGTAGTAGGAGAAGAGATGAATGATTGGAGAGAACGAATGCTATACTTTTCATACCCAATTAGAGAAAGAGATTATTCAAGGTGGCCAGACAAGCCAGAAGGATGGAAAGAGGTAACAGAAGAATACAGTGAGAAGCTAATGAGTTTAACATGCAAGTTGTTTGAGGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTTTGACAAAAGCATGTGTTGATATGGTTCAAAAGATTGTGGTAAATTACTACCCAAAATGCCCTCAACCTGACCTTACTCTTGGCCTGAAACGACACACTGATCCTGGCACAATCACTCTGGTGTTTCAAGAACAAGTGGGTGGCCTTCAAGTTACTAGAGATGAGGGTGAGACGTGGATCACTGTTCCTCCAGTTGAAGGTCCTGAATTATTATTTTTTGACAAAAATTATTTAAGTAATGGACGGTTCAAAAGAGCTGATCACAGGGCAGTGGTGAATTCAAGCTACAGCCGTTTATCCGTAGCAACATTCCAATATCCAGCAACAGATGCAATTGTGTACCCTTTGAAGGTCAGAGAGGGAGAGAAATATGTGATGGAGGAACACCTCACTTTTGCTGAAATATACAGAAGGAACATGAGCAATTACCTTGAGCAAAAGTGA
Protein sequence

>Msa0410950

MQTMAPAKTLDYLPQKNTLESSFIRDESTRPKGSYNQFSNDEIPIISLAGIDDVGGRRVEICDQIAKACENWGIFQVVDHGVDQKLIYEMTSFSKGFFDLPLEEKLRFDMSGGKKGGFVVGEEMNDWRERMLYFSYPIRERDYSRWPDKPEGWKEVTEEYSEKLMSLTCKLFEVLSEAMGLEKEALTKACVDMVQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLVFQEQVGGLQVTRDEGETWITVPPVEGPELLFFDKNYLSNGRFKRADHRAVVNSSYSRLSVATFQYPATDAIVYPLKVREGEKYVMEEHLTFAEIYRRNMSNYLEQK*