Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503590 | AFK41136.1 | 88.496 | 113 | 12 | 1 | 4 | 116 | 1 | 112 | 2.18e-65 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503590 | sp|Q06942|FL3H_MALDO | 70.796 | 113 | 32 | 1 | 4 | 116 | 1 | 112 | 3.70e-51 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503590 | I3SLJ4 | 88.496 | 113 | 12 | 1 | 4 | 116 | 1 | 112 | 1.04e-65 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0503590 | 0.826753 | 2.281714e-54 | -8.615850e-47 |
| Msa0032840 | Msa0503590 | -0.812267 | 4.620707e-51 | -8.615850e-47 |
| Msa0046100 | Msa0503590 | 0.816489 | 5.386237e-52 | -8.615850e-47 |
| Msa0101810 | Msa0503590 | -0.809174 | 2.155808e-50 | -8.615850e-47 |
| Msa0110970 | Msa0503590 | 0.835278 | 1.841659e-56 | -8.615850e-47 |
| Msa0114540 | Msa0503590 | -0.832249 | 1.052852e-55 | -8.615850e-47 |
| Msa0140780 | Msa0503590 | 0.803824 | 2.898642e-49 | -8.615850e-47 |
| Msa0157290 | Msa0503590 | 0.827720 | 1.338364e-54 | -8.615850e-47 |
| Msa0169860 | Msa0503590 | 0.811208 | 7.854986e-51 | -8.615850e-47 |
| Msa0194280 | Msa0503590 | 0.819722 | 1.000293e-52 | -8.615850e-47 |
| Msa0215320 | Msa0503590 | -0.808988 | 2.362662e-50 | -8.615850e-47 |
| Msa0218780 | Msa0503590 | 0.804337 | 2.267021e-49 | -8.615850e-47 |
| Msa0222920 | Msa0503590 | 0.804330 | 2.275182e-49 | -8.615850e-47 |
| Msa0230550 | Msa0503590 | -0.811592 | 6.482775e-51 | -8.615850e-47 |
| Msa0410950 | Msa0503590 | 0.880925 | 3.672055e-70 | -8.615850e-47 |
| Msa0422850 | Msa0503590 | 0.804524 | 2.072852e-49 | -8.615850e-47 |
| Msa0422930 | Msa0503590 | 0.803354 | 3.627704e-49 | -8.615850e-47 |
| Msa0436280 | Msa0503590 | -0.816009 | 6.895258e-52 | -8.615850e-47 |
| Msa0455290 | Msa0503590 | 0.866662 | 2.419534e-65 | -8.615850e-47 |
| Msa0461720 | Msa0503590 | 0.808328 | 3.269588e-50 | -8.615850e-47 |
| Msa0238890 | Msa0503590 | 0.800061 | 1.719373e-48 | -8.615850e-47 |
| Msa0264350 | Msa0503590 | 0.821374 | 4.176325e-53 | -8.615850e-47 |
| Msa0269820 | Msa0503590 | 0.800137 | 1.659799e-48 | -8.615850e-47 |
| Msa0274290 | Msa0503590 | 0.807492 | 4.921864e-50 | -8.615850e-47 |
| Msa0345330 | Msa0503590 | 0.832300 | 1.022434e-55 | -8.615850e-47 |
| Msa0345410 | Msa0503590 | 0.830029 | 3.695807e-55 | -8.615850e-47 |
| Msa0363310 | Msa0503590 | 0.857309 | 1.782286e-62 | -8.615850e-47 |
| Msa0503580 | Msa0503590 | 0.816120 | 6.513602e-52 | -8.615850e-47 |
| Msa0503590 | Msa0574890 | 0.815196 | 1.046480e-51 | -8.615850e-47 |
| Msa0503590 | Msa0581760 | 0.816746 | 4.716628e-52 | -8.615850e-47 |
| Msa0503590 | Msa0647130 | 0.810305 | 1.231490e-50 | -8.615850e-47 |
| Msa0503590 | Msa0677400 | 0.802747 | 4.844431e-49 | -8.615850e-47 |
| Msa0503590 | Msa0677410 | 0.807088 | 5.995461e-50 | -8.615850e-47 |
| Msa0503590 | Msa0723000 | 0.802790 | 4.747194e-49 | -8.615850e-47 |
| Msa0503590 | Msa0777570 | -0.808325 | 3.273727e-50 | -8.615850e-47 |
| Msa0503590 | Msa0787470 | 0.805349 | 1.393651e-49 | -8.615850e-47 |
| Msa0503590 | Msa0843220 | 0.810878 | 9.257959e-51 | -8.615850e-47 |
| Msa0503590 | Msa0880140 | 0.825433 | 4.700375e-54 | -8.615850e-47 |
| Msa0503590 | Msa0896210 | 0.801824 | 7.502688e-49 | -8.615850e-47 |
| Msa0503590 | Msa0896220 | 0.826324 | 2.887400e-54 | -8.615850e-47 |
| Msa0503590 | Msa0930780 | 0.806780 | 6.967647e-50 | -8.615850e-47 |
| Msa0503590 | Msa0948290 | 0.804571 | 2.026605e-49 | -8.615850e-47 |
| Msa0503590 | Msa0986900 | 0.805828 | 1.105565e-49 | -8.615850e-47 |
| Msa0503590 | Msa0996080 | 0.809853 | 1.540631e-50 | -8.615850e-47 |
| Msa0503590 | Msa1055280 | 0.803750 | 3.003117e-49 | -8.615850e-47 |
| Msa0503590 | Msa1075220 | -0.810950 | 8.931407e-51 | -8.615850e-47 |
| Msa0503590 | Msa1098560 | 0.809850 | 1.543488e-50 | -8.615850e-47 |
| Msa0503590 | Msa1124680 | -0.816503 | 5.347502e-52 | -8.615850e-47 |
| Msa0503590 | Msa1125000 | 0.801944 | 7.089759e-49 | -8.615850e-47 |
| Msa0503590 | Msa1162550 | -0.806292 | 8.829229e-50 | -8.615850e-47 |
| Msa0503590 | Msa1222970 | 0.828690 | 7.812299e-55 | -8.615850e-47 |
| Msa0503590 | Msa1242230 | 0.824015 | 1.014513e-53 | -8.615850e-47 |
| Msa0503590 | Msa1242240 | 0.817382 | 3.393884e-52 | -8.615850e-47 |
| Msa0503590 | Msa1251750 | 0.801816 | 7.531912e-49 | -8.615850e-47 |
| Msa0503590 | Msa1264020 | 0.812523 | 4.062253e-51 | -8.615850e-47 |
| Msa0503590 | Msa1267220 | 0.819732 | 9.949820e-53 | -8.615850e-47 |
| Msa0503590 | Msa1269580 | -0.803864 | 2.843848e-49 | -8.615850e-47 |
| Msa0503590 | Msa1269820 | 0.812970 | 3.242723e-51 | -8.615850e-47 |
| Msa0503590 | Msa1274520 | 0.809533 | 1.805283e-50 | -8.615850e-47 |
| Msa0503590 | Msa1283840 | 0.815361 | 9.616659e-52 | -8.615850e-47 |
| Msa0503590 | Msa1284260 | 0.826895 | 2.109970e-54 | -8.615850e-47 |
| Msa0503590 | Msa1318120 | 0.802004 | 6.890094e-49 | -8.615850e-47 |
| Msa0503590 | Msa1322860 | 0.831892 | 1.290362e-55 | -8.615850e-47 |
| Msa0503590 | Msa1327050 | 0.840976 | 6.285875e-58 | -8.615850e-47 |
| Msa0503590 | Msa1346370 | 0.813664 | 2.282523e-51 | -8.615850e-47 |
| Msa0503590 | Msa1351760 | 0.813380 | 2.636215e-51 | -8.615850e-47 |
| Msa0503590 | Msa1367080 | 0.812797 | 3.538068e-51 | -8.615850e-47 |
| Msa0503590 | Msa1374550 | 0.805084 | 1.583609e-49 | -8.615850e-47 |
| Msa0503590 | Msa1429360 | -0.816125 | 6.498750e-52 | -8.615850e-47 |
| Msa0503590 | Msa1461300 | 0.813248 | 2.817981e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503590 | MtrunA17_Chr3g0102041 | 88.496 | 113 | 12 | 1 | 4 | 116 | 1 | 112 | 4.99e-67 | 206 |
| Msa0503590 | MtrunA17_Chr8g0371931 | 78.761 | 113 | 23 | 1 | 4 | 116 | 1 | 112 | 2.90e-59 | 186 |
| Msa0503590 | MtrunA17_Chr8g0371921 | 77.876 | 113 | 24 | 1 | 4 | 116 | 1 | 112 | 3.31e-57 | 181 |
| Msa0503590 | MtrunA17_Chr5g0405411 | 74.336 | 113 | 28 | 1 | 4 | 116 | 1 | 112 | 3.26e-55 | 175 |
| Msa0503590 | MtrunA17_Chr8g0345831 | 41.964 | 112 | 52 | 3 | 1 | 107 | 1 | 104 | 3.15e-21 | 86.7 |
| Msa0503590 | MtrunA17_Chr2g0296371 | 35.354 | 99 | 57 | 3 | 18 | 113 | 27 | 121 | 3.31e-15 | 70.1 |
| Msa0503590 | MtrunA17_Chr5g0412671 | 36.000 | 100 | 63 | 1 | 18 | 117 | 14 | 112 | 1.62e-14 | 68.2 |
| Msa0503590 | MtrunA17_Chr7g0239111 | 34.579 | 107 | 65 | 3 | 6 | 110 | 16 | 119 | 4.33e-14 | 67.0 |
| Msa0503590 | MtrunA17_Chr7g0239101 | 36.364 | 88 | 53 | 2 | 23 | 110 | 35 | 119 | 7.78e-14 | 66.2 |
| Msa0503590 | MtrunA17_Chr7g0239121 | 35.514 | 107 | 64 | 3 | 6 | 110 | 12 | 115 | 1.47e-13 | 65.5 |
| Msa0503590 | MtrunA17_Chr1g0179801 | 33.654 | 104 | 54 | 2 | 14 | 117 | 50 | 138 | 4.08e-13 | 64.3 |
| Msa0503590 | MtrunA17_Chr7g0250511 | 33.333 | 93 | 59 | 3 | 17 | 108 | 23 | 113 | 9.23e-13 | 63.2 |
| Msa0503590 | MtrunA17_Chr3g0113641 | 32.979 | 94 | 62 | 1 | 16 | 108 | 23 | 116 | 1.53e-12 | 62.4 |
| Msa0503590 | MtrunA17_Chr5g0424211 | 31.313 | 99 | 63 | 1 | 7 | 105 | 6 | 99 | 1.77e-12 | 62.4 |
| Msa0503590 | MtrunA17_Chr5g0412651 | 34.000 | 100 | 65 | 1 | 18 | 117 | 14 | 112 | 1.78e-12 | 62.4 |
| Msa0503590 | MtrunA17_Chr5g0424201 | 37.079 | 89 | 51 | 2 | 17 | 105 | 18 | 101 | 1.79e-12 | 62.4 |
| Msa0503590 | MtrunA17_Chr3g0114871 | 31.868 | 91 | 57 | 1 | 18 | 108 | 17 | 102 | 2.22e-12 | 61.6 |
| Msa0503590 | MtrunA17_Chr3g0128001 | 38.462 | 91 | 48 | 3 | 19 | 108 | 15 | 98 | 2.59e-12 | 62.0 |
| Msa0503590 | MtrunA17_Chr7g0242551 | 34.343 | 99 | 56 | 3 | 17 | 108 | 24 | 120 | 2.81e-12 | 62.0 |
| Msa0503590 | MtrunA17_Chr1g0170641 | 28.431 | 102 | 64 | 3 | 5 | 106 | 16 | 108 | 1.89e-11 | 57.8 |
| Msa0503590 | MtrunA17_Chr8g0375601 | 30.108 | 93 | 63 | 1 | 23 | 113 | 26 | 118 | 4.91e-11 | 58.2 |
| Msa0503590 | MtrunA17_Chr8g0375661 | 32.258 | 93 | 59 | 3 | 23 | 113 | 33 | 123 | 5.92e-11 | 56.6 |
| Msa0503590 | MtrunA17_Chr1g0162361 | 38.636 | 88 | 46 | 3 | 19 | 105 | 4 | 84 | 8.94e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503590 | AT3G51240.1 | 67.257 | 113 | 35 | 2 | 4 | 116 | 1 | 111 | 2.16e-47 | 155 |
| Msa0503590 | AT4G10490.1 | 33.945 | 109 | 64 | 2 | 7 | 115 | 12 | 112 | 8.23e-14 | 66.6 |
| Msa0503590 | AT3G19000.2 | 35.165 | 91 | 55 | 1 | 19 | 105 | 4 | 94 | 2.61e-13 | 64.7 |
| Msa0503590 | AT5G24530.1 | 34.737 | 95 | 54 | 3 | 15 | 108 | 11 | 98 | 4.36e-13 | 64.3 |
| Msa0503590 | AT3G19000.1 | 35.165 | 91 | 55 | 1 | 19 | 105 | 4 | 94 | 4.59e-13 | 64.3 |
| Msa0503590 | AT4G10500.1 | 33.708 | 89 | 57 | 1 | 19 | 107 | 20 | 106 | 8.72e-13 | 63.5 |
| Msa0503590 | AT5G08640.2 | 37.349 | 83 | 47 | 1 | 23 | 105 | 23 | 100 | 2.04e-12 | 62.4 |
| Msa0503590 | AT5G08640.1 | 37.349 | 83 | 47 | 1 | 23 | 105 | 23 | 100 | 2.04e-12 | 62.4 |
| Msa0503590 | AT2G38240.1 | 34.021 | 97 | 55 | 4 | 18 | 111 | 22 | 112 | 7.06e-12 | 61.2 |
| Msa0503590 | AT3G19010.3 | 34.831 | 89 | 57 | 1 | 19 | 107 | 4 | 91 | 1.69e-11 | 60.1 |
| Msa0503590 | AT3G19010.1 | 34.831 | 89 | 57 | 1 | 19 | 107 | 4 | 91 | 1.90e-11 | 59.7 |
| Msa0503590 | AT3G19010.4 | 34.831 | 89 | 57 | 1 | 19 | 107 | 4 | 91 | 1.90e-11 | 59.7 |
| Msa0503590 | AT3G19010.2 | 34.831 | 89 | 57 | 1 | 19 | 107 | 4 | 91 | 2.05e-11 | 59.7 |
| Msa0503590 | AT1G80330.1 | 33.065 | 124 | 67 | 4 | 1 | 118 | 1 | 114 | 3.53e-11 | 58.9 |
| Msa0503590 | AT5G05600.2 | 33.333 | 96 | 63 | 1 | 17 | 111 | 36 | 131 | 6.79e-11 | 58.2 |
| Msa0503590 | AT5G05600.1 | 33.333 | 96 | 63 | 1 | 17 | 111 | 36 | 131 | 7.05e-11 | 58.2 |
Find 102 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATAATCTCTTTCTCTAAT+TGG | 0.107736 | 3_4:+46995348 | None:intergenic |
| ATTAAAATTAAATGTAAAAT+AGG | 0.110695 | 3_4:+46989468 | None:intergenic |
| TTTAACATTCACGACGTTAT+TGG | 0.190740 | 3_4:+46989851 | None:intergenic |
| AGGTCAGGTTGAGGGCATTT+TGG | 0.233663 | 3_4:+46995150 | None:intergenic |
| TACAGAACCAAGCTAGATTT+TGG | 0.237279 | 3_4:+46989496 | None:intergenic |
| GTTACCTCTTTCCATCCTTT+TGG | 0.254976 | 3_4:+46995309 | None:intergenic |
| GACAAAAGCAAGTGTTGATA+TGG | 0.269449 | 3_4:-46995199 | Msa0503590:three_prime_UTR |
| CTTGAGCAAAAGTGAATGTT+AGG | 0.279746 | 3_4:-46989991 | Msa0503590:three_prime_UTR |
| TTGCATCTGTTGCTGGATAT+TGG | 0.281140 | 3_4:+46990109 | None:intergenic |
| AACTGATTGTAAGCACCTTT+TGG | 0.286081 | 3_4:+46996868 | None:intergenic |
| TGACATGTCTGGTGGTAAAA+AGG | 0.287392 | 3_4:-46996635 | Msa0503590:CDS |
| TTGCAAAAGCTTGCGAGAAC+TGG | 0.289000 | 3_4:-46996765 | Msa0503590:CDS |
| TTAAAATTAAATGTAAAATA+GGG | 0.315789 | 3_4:+46989469 | None:intergenic |
| GTTGTATGCTAAGATAGTTT+TGG | 0.316989 | 3_4:-46989763 | Msa0503590:three_prime_UTR |
| CGTGAATGTTAAACAATTGA+TGG | 0.337419 | 3_4:-46989841 | Msa0503590:three_prime_UTR |
| TATCAAATAATTTATAGATA+TGG | 0.337926 | 3_4:-46989902 | Msa0503590:three_prime_UTR |
| GCCACCAACGTCGTCGATTC+CGG | 0.344846 | 3_4:+46996813 | None:intergenic |
| AAATAATATTCGACCTTGAA+TGG | 0.354561 | 3_4:-46989551 | Msa0503590:three_prime_UTR |
| AAGAATCTCATTCAAAGGTT+TGG | 0.356999 | 3_4:+46989943 | None:intergenic |
| ACTTGCATGTTAAACTCATT+AGG | 0.358795 | 3_4:+46995268 | None:intergenic |
| GATAATCTCTTTCTCTAATT+GGG | 0.362087 | 3_4:+46995349 | None:intergenic |
| ATCCATGAGAAGAACTTAAT+AGG | 0.364724 | 3_4:+46989816 | None:intergenic |
| GTTGTCAATATTGGAGATCA+TGG | 0.376692 | 3_4:-46994994 | Msa0503590:three_prime_UTR |
| ATTCCGGCTAGAGAAATAAT+TGG | 0.388428 | 3_4:+46996829 | None:intergenic |
| GGTCGAATATTATTTCAGTT+TGG | 0.389218 | 3_4:+46989559 | None:intergenic |
| TACACAATTGCATCTGTTGC+TGG | 0.396791 | 3_4:+46990102 | None:intergenic |
| AATATTATTTCAGTTTGGTT+TGG | 0.412480 | 3_4:+46989564 | None:intergenic |
| TCTCCCTCTCTGACCTTCAA+AGG | 0.423280 | 3_4:+46990078 | None:intergenic |
| CACTCGAGTCTAGTTTCATC+AGG | 0.427976 | 3_4:-46996906 | Msa0503590:CDS |
| TGCAATTGTGTACCCTTTGA+AGG | 0.428183 | 3_4:-46990091 | Msa0503590:three_prime_UTR |
| ACAACAAAAGCACCTTCAAC+TGG | 0.430334 | 3_4:+46995012 | None:intergenic |
| TTGAAACGACACACTGATCC+TGG | 0.432012 | 3_4:-46995117 | Msa0503590:three_prime_UTR |
| CTATTTGTAATGGATGGAAA+GGG | 0.434966 | 3_4:-46989630 | Msa0503590:three_prime_UTR |
| ATCACTGTTCCTCCAGTTGA+AGG | 0.435018 | 3_4:-46995024 | Msa0503590:three_prime_UTR |
| CCTCATCTCTAGTAACTTGA+AGG | 0.438822 | 3_4:+46995058 | None:intergenic |
| TTTGGCTTGTCTGGCCACCT+TGG | 0.439708 | 3_4:+46995327 | None:intergenic |
| TAGCATACAACGAGAGTTTG+AGG | 0.443805 | 3_4:+46989775 | None:intergenic |
| TGCCATCAGAAGAGAAGCTT+CGG | 0.444347 | 3_4:-46996660 | Msa0503590:CDS |
| GAGGTGTTATCTGAGGCTAT+GGG | 0.447873 | 3_4:-46995240 | Msa0503590:three_prime_UTR |
| AAGCTTCGGTTTGACATGTC+TGG | 0.449959 | 3_4:-46996646 | Msa0503590:CDS |
| TGAGGTGTTATCTGAGGCTA+TGG | 0.451886 | 3_4:-46995241 | Msa0503590:three_prime_UTR |
| ATCTTCCAAGTTGTTGATCA+TGG | 0.452418 | 3_4:-46996739 | Msa0503590:CDS |
| AGGGAAAAGAGATGAATGAT+TGG | 0.453027 | 3_4:-46995398 | Msa0503590:three_prime_UTR |
| CCTCAACCTGACCTTACTCT+TGG | 0.460844 | 3_4:-46995141 | Msa0503590:three_prime_UTR |
| TGCAAAAGCTTGCGAGAACT+GGG | 0.464107 | 3_4:-46996764 | Msa0503590:CDS |
| GGAATGTTGCTACGGATAAA+CGG | 0.470067 | 3_4:+46990130 | None:intergenic |
| GCATTTCTATTTGTAATGGA+TGG | 0.474038 | 3_4:-46989636 | Msa0503590:three_prime_UTR |
| ATCTAAACCAAAATCTAGCT+TGG | 0.476110 | 3_4:-46989503 | Msa0503590:three_prime_UTR |
| ATATTCGACCTTGAATGGAT+TGG | 0.477027 | 3_4:-46989546 | Msa0503590:three_prime_UTR |
| CAAGAGTAAGGTCAGGTTGA+GGG | 0.483110 | 3_4:+46995142 | None:intergenic |
| CTCCCTCTCTGACCTTCAAA+GGG | 0.483986 | 3_4:+46990079 | None:intergenic |
| ATTCCAATTATTTCTCTAGC+CGG | 0.488494 | 3_4:-46996832 | Msa0503590:CDS |
| TCTATTTGTAATGGATGGAA+AGG | 0.496712 | 3_4:-46989631 | Msa0503590:three_prime_UTR |
| CCACGCCATGATCAACAACT+TGG | 0.500880 | 3_4:+46996734 | None:intergenic |
| GACGAAAGCACTCGTCCAAA+AGG | 0.503109 | 3_4:-46996883 | Msa0503590:CDS |
| TTTAACATGCAAGTTGTTTG+AGG | 0.504827 | 3_4:-46995259 | Msa0503590:three_prime_UTR |
| GGGAGAGAAATATGTGATGG+AGG | 0.506607 | 3_4:-46990061 | Msa0503590:three_prime_UTR |
| ATCCTATTAAGTTCTTCTCA+TGG | 0.511522 | 3_4:-46989818 | Msa0503590:three_prime_UTR |
| TGGATGGAAAGGGGTGTAAG+TGG | 0.519581 | 3_4:-46989620 | Msa0503590:three_prime_UTR |
| GGTTCAAAAGAGCTGATCAC+AGG | 0.523724 | 3_4:-46990176 | Msa0503590:three_prime_UTR |
| GTCGTTTCAAGCCAAGAGTA+AGG | 0.537782 | 3_4:+46995130 | None:intergenic |
| AACACCAGAGTGATTGTGCC+AGG | 0.538136 | 3_4:+46995099 | None:intergenic |
| GCCGGAATCGACGACGTTGG+TGG | 0.540536 | 3_4:-46996814 | Msa0503590:CDS |
| AGAGGGAGAGAAATATGTGA+TGG | 0.544187 | 3_4:-46990064 | Msa0503590:three_prime_UTR |
| TTCAAGCCAAGAGTAAGGTC+AGG | 0.545172 | 3_4:+46995135 | None:intergenic |
| AACCGAAGCTTCTCTTCTGA+TGG | 0.548453 | 3_4:+46996658 | None:intergenic |
| CCAAGAGTAAGGTCAGGTTG+AGG | 0.550579 | 3_4:+46995141 | None:intergenic |
| TAATCAAGAATCTCATTCAA+AGG | 0.553373 | 3_4:+46989938 | None:intergenic |
| AGGTGGCCAGACAAGCCAAA+AGG | 0.558170 | 3_4:-46995324 | Msa0503590:three_prime_UTR |
| TGCATGCAGTATTTAAGTAA+TGG | 0.564893 | 3_4:-46990201 | Msa0503590:intron |
| TATTTGTAATGGATGGAAAG+GGG | 0.571464 | 3_4:-46989629 | Msa0503590:three_prime_UTR |
| CTTCAAGTTACTAGAGATGA+GGG | 0.575286 | 3_4:-46995057 | Msa0503590:three_prime_UTR |
| TGATATGGTTCAAAAGATTG+TGG | 0.575423 | 3_4:-46995184 | Msa0503590:three_prime_UTR |
| TGCAGTATTTAAGTAATGGA+CGG | 0.578042 | 3_4:-46990197 | Msa0503590:intron |
| GTTGTTTGAGGTGTTATCTG+AGG | 0.584471 | 3_4:-46995247 | Msa0503590:three_prime_UTR |
| TGATCCTGGCACAATCACTC+TGG | 0.585677 | 3_4:-46995103 | Msa0503590:three_prime_UTR |
| TTGAGCAAAAGTGAATGTTA+GGG | 0.589568 | 3_4:-46989990 | Msa0503590:three_prime_UTR |
| CCAAGTTGTTGATCATGGCG+TGG | 0.589940 | 3_4:-46996734 | Msa0503590:CDS |
| GAATGTTAGGGACCTGCAGA+AGG | 0.592178 | 3_4:-46989978 | Msa0503590:three_prime_UTR |
| GGCCAGACAAGCCAAAAGGA+TGG | 0.593122 | 3_4:-46995320 | Msa0503590:three_prime_UTR |
| CCTTCAAGTTACTAGAGATG+AGG | 0.598782 | 3_4:-46995058 | Msa0503590:three_prime_UTR |
| AGGTGTTATCTGAGGCTATG+GGG | 0.601581 | 3_4:-46995239 | Msa0503590:three_prime_UTR |
| AAGAGCTGATCACAGGGCAG+TGG | 0.603019 | 3_4:-46990169 | Msa0503590:three_prime_UTR |
| TCTGGTGTTTCAAGAACAAG+TGG | 0.603815 | 3_4:-46995085 | Msa0503590:three_prime_UTR |
| TGTATATTTCAGCAAAAGTG+AGG | 0.608415 | 3_4:+46990034 | None:intergenic |
| TACCCTTTGAAGGTCAGAGA+GGG | 0.609840 | 3_4:-46990081 | Msa0503590:three_prime_UTR |
| TGGATATTGGAATGTTGCTA+CGG | 0.610921 | 3_4:+46990122 | None:intergenic |
| TTAGAGAAAGAGATTATCCA+AGG | 0.616007 | 3_4:-46995344 | Msa0503590:three_prime_UTR |
| CTAGAGATGAGGGTGAGACG+TGG | 0.616545 | 3_4:-46995047 | Msa0503590:three_prime_UTR |
| CAAGCCAAAAGGATGGAAAG+AGG | 0.623727 | 3_4:-46995313 | Msa0503590:three_prime_UTR |
| GTTCAAAAGAGCTGATCACA+GGG | 0.630306 | 3_4:-46990175 | Msa0503590:three_prime_UTR |
| CTTCGGTTTGACATGTCTGG+TGG | 0.633367 | 3_4:-46996643 | Msa0503590:CDS |
| ACAAAAGCACCTTCAACTGG+AGG | 0.663056 | 3_4:+46995015 | None:intergenic |
| ACTCGAGTCTAGTTTCATCA+GGG | 0.678203 | 3_4:-46996905 | Msa0503590:CDS |
| GTGTTTCAAGAACAAGTGGG+TGG | 0.685189 | 3_4:-46995081 | Msa0503590:three_prime_UTR |
| CTAGCCGGAATCGACGACGT+TGG | 0.685965 | 3_4:-46996817 | Msa0503590:CDS |
| AGCATTATACAAAAGCCAAG+AGG | 0.697704 | 3_4:-46997018 | Msa0503590:five_prime_UTR |
| GAGAAAGAGATTATCCAAGG+TGG | 0.701184 | 3_4:-46995341 | Msa0503590:three_prime_UTR |
| GCAAAAGCTTGCGAGAACTG+GGG | 0.707380 | 3_4:-46996763 | Msa0503590:CDS |
| GTACCCTTTGAAGGTCAGAG+AGG | 0.744630 | 3_4:-46990082 | Msa0503590:three_prime_UTR |
| CTGGTGTTTCAAGAACAAGT+GGG | 0.745352 | 3_4:-46995084 | Msa0503590:three_prime_UTR |
| GGTCGCAAATCTCTTCTCTG+CGG | 0.752904 | 3_4:+46996791 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTCAATGTTTATTATTT+GGG | + | chr3_4:46990860-46990879 | None:intergenic | 10.0% |
| !! | ATAATTCAATGTTTATTATT+TGG | + | chr3_4:46990861-46990880 | None:intergenic | 10.0% |
| !! | AATAATAAACATTGAATTAT+AGG | - | chr3_4:46990861-46990880 | Msa0503590:intron | 10.0% |
| !! | ATAATAAACATTGAATTATA+GGG | - | chr3_4:46990862-46990881 | Msa0503590:intron | 10.0% |
| !!! | ATTCTAAAATTTTCTTTTAT+TGG | + | chr3_4:46990944-46990963 | None:intergenic | 10.0% |
| !!! | ACAAAAACAAAAAATATTTT+TGG | + | chr3_4:46992102-46992121 | None:intergenic | 10.0% |
| !!! | AAAATATTTTTTGTTTTTGT+TGG | - | chr3_4:46992102-46992121 | Msa0503590:intron | 10.0% |
| !! | AAACAAAAAAATAAAATTGA+TGG | - | chr3_4:46995446-46995465 | Msa0503590:intron | 10.0% |
| !! | TATCAAATAATTTATAGATA+TGG | - | chr3_4:46996576-46996595 | Msa0503590:intron | 10.0% |
| !! | AAAAAAAAAATCAAGACTAA+TGG | + | chr3_4:46990372-46990391 | None:intergenic | 15.0% |
| !!! | AACTTATTCATCTTTAAAAT+TGG | + | chr3_4:46990749-46990768 | None:intergenic | 15.0% |
| !!! | ATTTTAAAGATGAATAAGTT+AGG | - | chr3_4:46990749-46990768 | Msa0503590:intron | 15.0% |
| !!! | TTTATTATTTTTGAATTGGT+TGG | - | chr3_4:46990808-46990827 | Msa0503590:intron | 15.0% |
| !!! | CATATGTAAATATTTTTGAA+TGG | + | chr3_4:46990913-46990932 | None:intergenic | 15.0% |
| !! | CATTCAAAAATATTTACATA+TGG | - | chr3_4:46990911-46990930 | Msa0503590:intron | 15.0% |
| !!! | AAATTTTCTTTTATTGGTAA+AGG | + | chr3_4:46990938-46990957 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTACCAACTATA+TGG | - | chr3_4:46991623-46991642 | Msa0503590:intron | 15.0% |
| !! | TATTTGAATTGAAGAAATAT+TGG | - | chr3_4:46992026-46992045 | Msa0503590:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | - | chr3_4:46992125-46992144 | Msa0503590:intron | 15.0% |
| !! | TAGTATGTAAAAAAAACTTA+GGG | + | chr3_4:46992602-46992621 | None:intergenic | 15.0% |
| !! | TTAGTATGTAAAAAAAACTT+AGG | + | chr3_4:46992603-46992622 | None:intergenic | 15.0% |
| !!! | TTTTGTTAAAGTGTTTTAAA+AGG | + | chr3_4:46993264-46993283 | None:intergenic | 15.0% |
| !!! | TTTGGATTTTAAAAAATATG+TGG | + | chr3_4:46993327-46993346 | None:intergenic | 15.0% |
| !!! | TACAAATTGTTAGAAAATTT+TGG | - | chr3_4:46993399-46993418 | Msa0503590:intron | 15.0% |
| !! | AAAAATGCAAAAATAACAAA+AGG | - | chr3_4:46994533-46994552 | Msa0503590:intron | 15.0% |
| !!! | TTAAATAGAGTTTTTAACAT+AGG | - | chr3_4:46994842-46994861 | Msa0503590:intron | 15.0% |
| !!! | AATTTTGAACAAGTATTTTT+AGG | - | chr3_4:46995212-46995231 | Msa0503590:three_prime_UTR | 15.0% |
| !! | TTGTCAAAAAATAATAATTC+AGG | + | chr3_4:46995752-46995771 | None:intergenic | 15.0% |
| !!! | TTATTTTTTGACAAAAATGT+AGG | - | chr3_4:46995758-46995777 | Msa0503590:intron | 15.0% |
| !!! | TTTTTAAAGTCTAATAATTC+GGG | + | chr3_4:46995785-46995804 | None:intergenic | 15.0% |
| !!! | GTTTTTAAAGTCTAATAATT+CGG | + | chr3_4:46995786-46995805 | None:intergenic | 15.0% |
| !!! | TTTTTAAAGTCTAATAATTC+AGG | + | chr3_4:46995785-46995804 | None:intergenic | 15.0% |
| !!! | ACGTTTCAATGTTTTTTTTT+TGG | + | chr3_4:46989488-46989507 | None:intergenic | 20.0% |
| !! | ATATCATTAATTGATTGATG+TGG | - | chr3_4:46990288-46990307 | Msa0503590:intron | 20.0% |
| !! | ACAATATTAATCAAGACTAA+TGG | + | chr3_4:46990409-46990428 | None:intergenic | 20.0% |
| !! | CTTGATTAATATTGTGTATT+TGG | - | chr3_4:46990414-46990433 | Msa0503590:intron | 20.0% |
| !!! | CACAAAATAAGTTCTAATTA+TGG | - | chr3_4:46990484-46990503 | Msa0503590:intron | 20.0% |
| !! | TAAGTTAGTTGAAAACATAA+TGG | - | chr3_4:46990721-46990740 | Msa0503590:intron | 20.0% |
| !! | CTCAAACTACTTATATATAT+TGG | - | chr3_4:46991044-46991063 | Msa0503590:intron | 20.0% |
| !!! | ATTTGTTTTATCTTGGTTTT+CGG | - | chr3_4:46991721-46991740 | Msa0503590:intron | 20.0% |
| !! | AAGAAAAAATGAGATATCAA+AGG | + | chr3_4:46991781-46991800 | None:intergenic | 20.0% |
| !!! | TTTGATATCTCATTTTTTCT+TGG | - | chr3_4:46991780-46991799 | Msa0503590:intron | 20.0% |
| !!! | TTGATATCTCATTTTTTCTT+GGG | - | chr3_4:46991781-46991800 | Msa0503590:intron | 20.0% |
| !! | AAATAATAGAGAAAATGCAA+AGG | - | chr3_4:46992267-46992286 | Msa0503590:intron | 20.0% |
| !!! | AACCTTTTTCCAAAAAATAT+AGG | + | chr3_4:46992303-46992322 | None:intergenic | 20.0% |
| !!! | TTTTTTAGACATTTTGGAAA+GGG | - | chr3_4:46992787-46992806 | Msa0503590:intron | 20.0% |
| !! | TAAAGATCATAGAAAAGATA+GGG | - | chr3_4:46992810-46992829 | Msa0503590:intron | 20.0% |
| !!! | TTTAATCTTTCTTTTGCTTT+TGG | + | chr3_4:46992903-46992922 | None:intergenic | 20.0% |
| !! | CAAGAAATACATGATTAATT+TGG | - | chr3_4:46993229-46993248 | Msa0503590:intron | 20.0% |
| !! | TAACAAAAAACGAAGATTAA+TGG | - | chr3_4:46993276-46993295 | Msa0503590:intron | 20.0% |
| !! | GCATTAATATGTGTTTAATT+TGG | + | chr3_4:46993345-46993364 | None:intergenic | 20.0% |
| !!! | ATTTTTAGTTAATTGCAGAT+TGG | + | chr3_4:46994505-46994524 | None:intergenic | 20.0% |
| !! | CTGCAATTAACTAAAAATAA+AGG | - | chr3_4:46994507-46994526 | Msa0503590:intron | 20.0% |
| !! | AACCAATAAAAAACACAAAA+TGG | - | chr3_4:46994617-46994636 | Msa0503590:intron | 20.0% |
| !! | TTGCAAAATTCATGAAAAAA+GGG | + | chr3_4:46994956-46994975 | None:intergenic | 20.0% |
| !! | TTTGCAAAATTCATGAAAAA+AGG | + | chr3_4:46994957-46994976 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | - | chr3_4:46995225-46995244 | Msa0503590:three_prime_UTR | 20.0% |
| !!! | ATATTGTTATACCCTAATTT+TGG | + | chr3_4:46995239-46995258 | None:intergenic | 20.0% |
| !!! | TGACAAATTGTTTTAAATTG+TGG | + | chr3_4:46995284-46995303 | None:intergenic | 20.0% |
| !! | ACGATAATAATAATAGTTCA+AGG | + | chr3_4:46995347-46995366 | None:intergenic | 20.0% |
| !! | TAGTAAAATGAACCTATTAA+AGG | - | chr3_4:46995490-46995509 | Msa0503590:intron | 20.0% |
| !! | AAGAAAAATGAGTTTAATGA+GGG | + | chr3_4:46995533-46995552 | None:intergenic | 20.0% |
| !! | AAAGAAAAATGAGTTTAATG+AGG | + | chr3_4:46995534-46995553 | None:intergenic | 20.0% |
| !!! | TTATTCAATGACAAGTTTTT+TGG | + | chr3_4:46995693-46995712 | None:intergenic | 20.0% |
| !! | TGTCATTGAATAAATACAAT+AGG | - | chr3_4:46995700-46995719 | Msa0503590:intron | 20.0% |
| !!! | ATGACAAGTTTTTTGTTTTT+TGG | + | chr3_4:46995826-46995845 | None:intergenic | 20.0% |
| !! | TGTCATTGAATAAATACAAT+AGG | - | chr3_4:46995700-46995719 | Msa0503590:intron | 20.0% |
| !!! | CAAGTTTGTTTTTTGTTTTT+TGG | + | chr3_4:46995933-46995952 | None:intergenic | 20.0% |
| !! | TTAAGTGTTCATATACTATT+TGG | - | chr3_4:46995987-46996006 | Msa0503590:intron | 20.0% |
| !!! | TCATTATTTTAAGAAGTGTT+GGG | - | chr3_4:46996065-46996084 | Msa0503590:intron | 20.0% |
| !!! | TTTTGCATTTCTATTTGTAA+TGG | - | chr3_4:46996838-46996857 | Msa0503590:CDS | 20.0% |
| !! | AATATTATTTCAGTTTGGTT+TGG | + | chr3_4:46996917-46996936 | None:intergenic | 20.0% |
| !! | AAAGAACTCTTTAGAAAAAC+TGG | + | chr3_4:46989794-46989813 | None:intergenic | 25.0% |
| ! | AACAAGTGATAACTACAAAA+TGG | + | chr3_4:46990055-46990074 | None:intergenic | 25.0% |
| !! | TAAAATACTCGTTCTAAACA+TGG | - | chr3_4:46990074-46990093 | Msa0503590:three_prime_UTR | 25.0% |
| !! | AAAATACTCGTTCTAAACAT+GGG | - | chr3_4:46990075-46990094 | Msa0503590:three_prime_UTR | 25.0% |
| ! | TTATAACAATATACACCTTG+AGG | - | chr3_4:46990184-46990203 | Msa0503590:three_prime_UTR | 25.0% |
| ! | AAATTGATAAATACACCTCA+AGG | + | chr3_4:46990202-46990221 | None:intergenic | 25.0% |
| !!! | TGTGTATTTGGTTCAATTTT+CGG | - | chr3_4:46990426-46990445 | Msa0503590:intron | 25.0% |
| !! | AATAAGTTCTAATTATGGAC+AGG | - | chr3_4:46990489-46990508 | Msa0503590:intron | 25.0% |
| !! | ATAAGTTCTAATTATGGACA+GGG | - | chr3_4:46990490-46990509 | Msa0503590:intron | 25.0% |
| ! | AAAGATGAATAAGTTAGGTT+CGG | - | chr3_4:46990754-46990773 | Msa0503590:intron | 25.0% |
| !!! | TATTTTTGAATTGGTTGGTA+TGG | - | chr3_4:46990813-46990832 | Msa0503590:intron | 25.0% |
| ! | GATAATCTCTTTCTCTAATT+GGG | + | chr3_4:46991132-46991151 | None:intergenic | 25.0% |
| !! | GCAATTTAAAACCATATAGT+TGG | + | chr3_4:46991637-46991656 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAAATTGCAATTG+AGG | - | chr3_4:46991642-46991661 | Msa0503590:intron | 25.0% |
| !!! | TTTGTTTTATCTTGGTTTTC+GGG | - | chr3_4:46991722-46991741 | Msa0503590:intron | 25.0% |
| ! | TGAGATATCAAAGGTTAAAA+AGG | + | chr3_4:46991772-46991791 | None:intergenic | 25.0% |
| ! | TAGGATACTATAGTTGTTAT+GGG | + | chr3_4:46991880-46991899 | None:intergenic | 25.0% |
| ! | ATAGGATACTATAGTTGTTA+TGG | + | chr3_4:46991881-46991900 | None:intergenic | 25.0% |
| ! | TAACAACTATAGTATCCTAT+AGG | - | chr3_4:46991881-46991900 | Msa0503590:intron | 25.0% |
| !!! | ATATTTTTGGAAGAGAACTA+CGG | + | chr3_4:46992089-46992108 | None:intergenic | 25.0% |
| !!! | GTTTTGACTCCTATATTTTT+TGG | - | chr3_4:46992291-46992310 | Msa0503590:intron | 25.0% |
| !!! | CTCCTATATTTTTTGGAAAA+AGG | - | chr3_4:46992298-46992317 | Msa0503590:intron | 25.0% |
| !!! | CATAGATATTTTTAGATGCA+TGG | + | chr3_4:46992437-46992456 | None:intergenic | 25.0% |
| !! | TGCAAGAAATTAAAAGCATA+AGG | - | chr3_4:46992561-46992580 | Msa0503590:intron | 25.0% |
| !!! | TGACACTTTTTTAGACATTT+TGG | - | chr3_4:46992781-46992800 | Msa0503590:intron | 25.0% |
| !!! | CTTTTTTAGACATTTTGGAA+AGG | - | chr3_4:46992786-46992805 | Msa0503590:intron | 25.0% |
| ! | GTAAAGATCATAGAAAAGAT+AGG | - | chr3_4:46992809-46992828 | Msa0503590:intron | 25.0% |
| ! | AATGACATAGAAATAACCAA+GGG | - | chr3_4:46992834-46992853 | Msa0503590:intron | 25.0% |
| !!! | TTTTGCTTTTGGTAAATTCT+TGG | + | chr3_4:46992892-46992911 | None:intergenic | 25.0% |
| ! | TTGTATCATGACTGAAAATT+TGG | + | chr3_4:46993011-46993030 | None:intergenic | 25.0% |
| ! | AATGTGATAACTATGCTTAT+AGG | + | chr3_4:46993073-46993092 | None:intergenic | 25.0% |
| ! | TAAATCTTACTTCCAAAACA+TGG | + | chr3_4:46993169-46993188 | None:intergenic | 25.0% |
| !!! | GATTTACCAGTATTTTAGAT+CGG | - | chr3_4:46993948-46993967 | Msa0503590:intron | 25.0% |
| !!! | AGCTTGTTTTTGATGATTTT+CGG | - | chr3_4:46994179-46994198 | Msa0503590:intron | 25.0% |
| ! | TGAATATTCATGAACATTCA+TGG | - | chr3_4:46994296-46994315 | Msa0503590:intron | 25.0% |
| !!! | GTCCATTTTGTGTTTTTTAT+TGG | + | chr3_4:46994622-46994641 | None:intergenic | 25.0% |
| !!! | ACTCAGATGCAATTTTAAAA+TGG | - | chr3_4:46994749-46994768 | Msa0503590:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | - | chr3_4:46995224-46995243 | Msa0503590:three_prime_UTR | 25.0% |
| ! | TTGTGGTAAGAACAATAATT+GGG | + | chr3_4:46995267-46995286 | None:intergenic | 25.0% |
| ! | ATTGTGGTAAGAACAATAAT+TGG | + | chr3_4:46995268-46995287 | None:intergenic | 25.0% |
| ! | TATTATCGTACTTATGATGT+AGG | - | chr3_4:46995358-46995377 | Msa0503590:three_prime_UTR | 25.0% |
| !!! | TTTTTAAAGCCTAAAGATTC+AGG | + | chr3_4:46995385-46995404 | None:intergenic | 25.0% |
| !! | TTGTTTCTTACATTTGAAAC+CGG | + | chr3_4:46995432-46995451 | None:intergenic | 25.0% |
| ! | CAAGATTTGCCAAAATAAAT+TGG | + | chr3_4:46996029-46996048 | None:intergenic | 25.0% |
| !!! | CTCATTATTTTAAGAAGTGT+TGG | - | chr3_4:46996064-46996083 | Msa0503590:intron | 25.0% |
| ! | CATTAACGCAAAAAAAAAAG+CGG | - | chr3_4:46996148-46996167 | Msa0503590:intron | 25.0% |
| ! | TAATCAAGAATCTCATTCAA+AGG | + | chr3_4:46996543-46996562 | None:intergenic | 25.0% |
| !! | TTGTATGCTAAGATAGTTTT+GGG | - | chr3_4:46996716-46996735 | Msa0503590:CDS | 25.0% |
| !! | GTTTAGACTTTCAATTTTGT+CGG | + | chr3_4:46996895-46996914 | None:intergenic | 25.0% |
| ! | AAATAATATTCGACCTTGAA+TGG | - | chr3_4:46996927-46996946 | Msa0503590:CDS | 25.0% |
| !! | ATTTTAAACCAATCCATTCA+AGG | + | chr3_4:46996943-46996962 | None:intergenic | 25.0% |
| !!! | GATTTTGGTTTAGATTGATT+CGG | + | chr3_4:46996970-46996989 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTTGGTTCCTCT+TGG | + | chr3_4:46989478-46989497 | None:intergenic | 30.0% |
| ! | CTAACTTTTCATGCAAACAA+TGG | - | chr3_4:46989510-46989529 | Msa0503590:three_prime_UTR | 30.0% |
| ! | ATTCCAATTATTTCTCTAGC+CGG | - | chr3_4:46989646-46989665 | Msa0503590:three_prime_UTR | 30.0% |
| ! | TTTCACACACTTGCATTTTT+AGG | - | chr3_4:46989920-46989939 | Msa0503590:three_prime_UTR | 30.0% |
| ! | TTCACACACTTGCATTTTTA+GGG | - | chr3_4:46989921-46989940 | Msa0503590:three_prime_UTR | 30.0% |
| ! | GTATTTTGCGAGTTACATTT+TGG | - | chr3_4:46989945-46989964 | Msa0503590:three_prime_UTR | 30.0% |
| CGGATGACTAAAAAATAAGT+TGG | - | chr3_4:46990098-46990117 | Msa0503590:three_prime_UTR | 30.0% | |
| ! | ACACCTTCTAAAAACTAAGT+GGG | + | chr3_4:46990163-46990182 | None:intergenic | 30.0% |
| ! | GTAGACTTTTCTCTTCAAAT+GGG | - | chr3_4:46990552-46990571 | Msa0503590:intron | 30.0% |
| AAGATGAATAAGTTAGGTTC+GGG | - | chr3_4:46990755-46990774 | Msa0503590:intron | 30.0% | |
| ! | TGTTTATTATTTGGGATAGC+TGG | + | chr3_4:46990852-46990871 | None:intergenic | 30.0% |
| ATATTGGATCTCCTATTTAC+AGG | - | chr3_4:46991060-46991079 | Msa0503590:intron | 30.0% | |
| TATTGGATCTCCTATTTACA+GGG | - | chr3_4:46991061-46991080 | Msa0503590:intron | 30.0% | |
| GGATAATCTCTTTCTCTAAT+TGG | + | chr3_4:46991133-46991152 | None:intergenic | 30.0% | |
| TTAGAGAAAGAGATTATCCA+AGG | - | chr3_4:46991134-46991153 | Msa0503590:intron | 30.0% | |
| ACTTGCATGTTAAACTCATT+AGG | + | chr3_4:46991213-46991232 | None:intergenic | 30.0% | |
| TTTAACATGCAAGTTGTTTG+AGG | - | chr3_4:46991219-46991238 | Msa0503590:intron | 30.0% | |
| TGATATGGTTCAAAAGATTG+TGG | - | chr3_4:46991294-46991313 | Msa0503590:intron | 30.0% | |
| TTGAGGTCATAATGTAGTTA+AGG | - | chr3_4:46991659-46991678 | Msa0503590:intron | 30.0% | |
| ! | TTGCGAATTTTACCGTATTA+GGG | + | chr3_4:46991689-46991708 | None:intergenic | 30.0% |
| ! | ATTGCGAATTTTACCGTATT+AGG | + | chr3_4:46991690-46991709 | None:intergenic | 30.0% |
| !!! | TATCTCATTTTTTCTTGGGA+AGG | - | chr3_4:46991785-46991804 | Msa0503590:intron | 30.0% |
| !!! | ATCTCATTTTTTCTTGGGAA+GGG | - | chr3_4:46991786-46991805 | Msa0503590:intron | 30.0% |
| TCTTCACTTAGTAAACTCTT+AGG | + | chr3_4:46991971-46991990 | None:intergenic | 30.0% | |
| GAGTTTACTAAGTGAAGAAT+TGG | - | chr3_4:46991973-46991992 | Msa0503590:intron | 30.0% | |
| TTTACTAAGTGAAGAATTGG+AGG | - | chr3_4:46991976-46991995 | Msa0503590:intron | 30.0% | |
| TTACTAAGTGAAGAATTGGA+GGG | - | chr3_4:46991977-46991996 | Msa0503590:intron | 30.0% | |
| CATAAGATTGTGAAATTGTG+AGG | - | chr3_4:46992182-46992201 | Msa0503590:intron | 30.0% | |
| ! | TGAGGTTTGATTAGTGATTT+TGG | - | chr3_4:46992200-46992219 | Msa0503590:intron | 30.0% |
| !!! | GTGATGTTGTTCAAGTTTTT+TGG | - | chr3_4:46992328-46992347 | Msa0503590:intron | 30.0% |
| GCATGTTTAGATGAATGTTT+AGG | + | chr3_4:46992379-46992398 | None:intergenic | 30.0% | |
| GCATGTTTAGATGTATGTTT+AGG | + | chr3_4:46992405-46992424 | None:intergenic | 30.0% | |
| !!! | ATATTTTTAGATGCATGGCT+AGG | + | chr3_4:46992432-46992451 | None:intergenic | 30.0% |
| ! | ATTGGCCTAGATACATTATA+TGG | - | chr3_4:46992535-46992554 | Msa0503590:intron | 30.0% |
| CAAGACCATATAATGTATCT+AGG | + | chr3_4:46992543-46992562 | None:intergenic | 30.0% | |
| CAATGACATAGAAATAACCA+AGG | - | chr3_4:46992833-46992852 | Msa0503590:intron | 30.0% | |
| AATATATGCTCATAATCCCT+TGG | + | chr3_4:46992853-46992872 | None:intergenic | 30.0% | |
| AGTCATGATACAAGAATCAA+AGG | - | chr3_4:46993018-46993037 | Msa0503590:intron | 30.0% | |
| TTGAATCTTGATAAAAAGCG+CGG | + | chr3_4:46993101-46993120 | None:intergenic | 30.0% | |
| ! | CACATACATTTTCCATGTTT+TGG | - | chr3_4:46993154-46993173 | Msa0503590:intron | 30.0% |
| CTTGTGTGTGTTTCTTAAAT+TGG | + | chr3_4:46993199-46993218 | None:intergenic | 30.0% | |
| GCTTATATGCTGTATCTAAT+GGG | + | chr3_4:46993585-46993604 | None:intergenic | 30.0% | |
| AGCTTATATGCTGTATCTAA+TGG | + | chr3_4:46993586-46993605 | None:intergenic | 30.0% | |
| GAGAGAAAGAAATTGGAAAA+TGG | + | chr3_4:46993628-46993647 | None:intergenic | 30.0% | |
| GTTTAGAGAGAGAAAGAAAT+TGG | + | chr3_4:46993635-46993654 | None:intergenic | 30.0% | |
| ! | TGTTTTCGAAAATCTGAGTT+TGG | + | chr3_4:46993825-46993844 | None:intergenic | 30.0% |
| ! | CAAATCGTGATTTTCATTTC+TGG | - | chr3_4:46993859-46993878 | Msa0503590:intron | 30.0% |
| !!! | ATTTCTGGGATTTTGTTATG+AGG | - | chr3_4:46994253-46994272 | Msa0503590:intron | 30.0% |
| ! | TCATGAACATTCATGGTTTT+TGG | - | chr3_4:46994303-46994322 | Msa0503590:intron | 30.0% |
| AAGTACCTCATTTAAGTAGT+TGG | + | chr3_4:46994654-46994673 | None:intergenic | 30.0% | |
| ACTAAAATGAGTTTGAATGC+AGG | - | chr3_4:46994916-46994935 | Msa0503590:intron | 30.0% | |
| ACTTGAAATGCAAGAAAACA+TGG | - | chr3_4:46995063-46995082 | Msa0503590:three_prime_UTR | 30.0% | |
| CAGTGTAAACAATAGCAAAT+TGG | - | chr3_4:46995147-46995166 | Msa0503590:three_prime_UTR | 30.0% | |
| CATTTAAATTGTACTTCCTC+CGG | - | chr3_4:46995410-46995429 | Msa0503590:intron | 30.0% | |
| ! | TTTCAATTTTACCCTTGTCT+TGG | + | chr3_4:46995572-46995591 | None:intergenic | 30.0% |
| ! | TTGTTTCTTACATTTGAGAC+CGG | - | chr3_4:46995659-46995678 | Msa0503590:intron | 30.0% |
| ! | TCACATGGTCCAATTTATTT+TGG | - | chr3_4:46996017-46996036 | Msa0503590:intron | 30.0% |
| !! | ACATATTATTAATTTGCGCG+TGG | - | chr3_4:46996254-46996273 | Msa0503590:intron | 30.0% |
| TGCATGCAGTATTTAAGTAA+TGG | - | chr3_4:46996277-46996296 | Msa0503590:intron | 30.0% | |
| ! | TGCAGTATTTAAGTAATGGA+CGG | - | chr3_4:46996281-46996300 | Msa0503590:intron | 30.0% |
| TGTATATTTCAGCAAAAGTG+AGG | + | chr3_4:46996447-46996466 | None:intergenic | 30.0% | |
| ! | CTTTTGCTGAAATATACAGA+AGG | - | chr3_4:46996449-46996468 | Msa0503590:intron | 30.0% |
| TTGAGCAAAAGTGAATGTTA+GGG | - | chr3_4:46996488-46996507 | Msa0503590:intron | 30.0% | |
| AAGAATCTCATTCAAAGGTT+TGG | + | chr3_4:46996538-46996557 | None:intergenic | 30.0% | |
| TTTAACATTCACGACGTTAT+TGG | + | chr3_4:46996630-46996649 | None:intergenic | 30.0% | |
| CGTGAATGTTAAACAATTGA+TGG | - | chr3_4:46996637-46996656 | Msa0503590:CDS | 30.0% | |
| ATCCTATTAAGTTCTTCTCA+TGG | - | chr3_4:46996660-46996679 | Msa0503590:CDS | 30.0% | |
| ATCCATGAGAAGAACTTAAT+AGG | + | chr3_4:46996665-46996684 | None:intergenic | 30.0% | |
| ! | GTTGTATGCTAAGATAGTTT+TGG | - | chr3_4:46996715-46996734 | Msa0503590:CDS | 30.0% |
| !!! | TTTGTCCCTTTTTTTGATGT+TGG | - | chr3_4:46996776-46996795 | Msa0503590:CDS | 30.0% |
| GAGAACCAACATCAAAAAAA+GGG | + | chr3_4:46996784-46996803 | None:intergenic | 30.0% | |
| AGAGAACCAACATCAAAAAA+AGG | + | chr3_4:46996785-46996804 | None:intergenic | 30.0% | |
| ! | GCATTTCTATTTGTAATGGA+TGG | - | chr3_4:46996842-46996861 | Msa0503590:CDS | 30.0% |
| !! | TCTATTTGTAATGGATGGAA+AGG | - | chr3_4:46996847-46996866 | Msa0503590:CDS | 30.0% |
| !! | CTATTTGTAATGGATGGAAA+GGG | - | chr3_4:46996848-46996867 | Msa0503590:CDS | 30.0% |
| !! | TATTTGTAATGGATGGAAAG+GGG | - | chr3_4:46996849-46996868 | Msa0503590:CDS | 30.0% |
| GGTCGAATATTATTTCAGTT+TGG | + | chr3_4:46996922-46996941 | None:intergenic | 30.0% | |
| ATCTAAACCAAAATCTAGCT+TGG | - | chr3_4:46996975-46996994 | Msa0503590:exon | 30.0% | |
| !! | CTTGGCTTTTGTATAATGCT+CGG | + | chr3_4:46989460-46989479 | None:intergenic | 35.0% |
| AGCATTATACAAAAGCCAAG+AGG | - | chr3_4:46989460-46989479 | Msa0503590:three_prime_UTR | 35.0% | |
| ! | AAATAATCGAGAGTTTTCGC+TGG | + | chr3_4:46989538-46989557 | None:intergenic | 35.0% |
| ! | AACTGATTGTAAGCACCTTT+TGG | + | chr3_4:46989613-46989632 | None:intergenic | 35.0% |
| ATTCCGGCTAGAGAAATAAT+TGG | + | chr3_4:46989652-46989671 | None:intergenic | 35.0% | |
| ATCTTCCAAGTTGTTGATCA+TGG | - | chr3_4:46989739-46989758 | Msa0503590:three_prime_UTR | 35.0% | |
| !!! | CACACTAACTAGTTTTTACG+TGG | - | chr3_4:46990005-46990024 | Msa0503590:three_prime_UTR | 35.0% |
| !!! | TTACGTGGAAGTGTTTTACT+AGG | - | chr3_4:46990020-46990039 | Msa0503590:three_prime_UTR | 35.0% |
| GTATTCTAGCAAATGTCTGT+AGG | - | chr3_4:46990122-46990141 | Msa0503590:three_prime_UTR | 35.0% | |
| !! | ACACCCACTTAGTTTTTAGA+AGG | - | chr3_4:46990157-46990176 | Msa0503590:three_prime_UTR | 35.0% |
| ! | CACACCTTCTAAAAACTAAG+TGG | + | chr3_4:46990164-46990183 | None:intergenic | 35.0% |
| !!! | ACTCACTAGTTTTTATGTGC+GGG | + | chr3_4:46990248-46990267 | None:intergenic | 35.0% |
| !!! | CACTCACTAGTTTTTATGTG+CGG | + | chr3_4:46990249-46990268 | None:intergenic | 35.0% |
| ! | CGTAGACTTTTCTCTTCAAA+TGG | - | chr3_4:46990551-46990570 | Msa0503590:intron | 35.0% |
| !! | TTTGAAGAGAAAGTGTTGGT+TGG | + | chr3_4:46990606-46990625 | None:intergenic | 35.0% |
| ! | CTCATTTGAAGAGAAAGTGT+TGG | + | chr3_4:46990610-46990629 | None:intergenic | 35.0% |
| ACACTTTCTCTTCAAATGAG+AGG | - | chr3_4:46990610-46990629 | Msa0503590:intron | 35.0% | |
| AGAGGACTAGATTTCTCAAA+TGG | - | chr3_4:46990628-46990647 | Msa0503590:intron | 35.0% | |
| GAGGACTAGATTTCTCAAAT+GGG | - | chr3_4:46990629-46990648 | Msa0503590:intron | 35.0% | |
| AGATGAATAAGTTAGGTTCG+GGG | - | chr3_4:46990756-46990775 | Msa0503590:intron | 35.0% | |
| AGGGTGCATATAATATGAAC+CGG | - | chr3_4:46990881-46990900 | Msa0503590:intron | 35.0% | |
| !! | TATTTTTGAATGGCTCGTAC+CGG | + | chr3_4:46990903-46990922 | None:intergenic | 35.0% |
| ! | CATCTCTTTTCCCTGTAAAT+AGG | + | chr3_4:46991074-46991093 | None:intergenic | 35.0% |
| AGGGAAAAGAGATGAATGAT+TGG | - | chr3_4:46991080-46991099 | Msa0503590:intron | 35.0% | |
| !! | GACAAAAGCAAGTGTTGATA+TGG | - | chr3_4:46991279-46991298 | Msa0503590:intron | 35.0% |
| ! | CTTCAAGTTACTAGAGATGA+GGG | - | chr3_4:46991421-46991440 | Msa0503590:intron | 35.0% |
| !! | GGTGCTTTTGTTGTCAATAT+TGG | - | chr3_4:46991475-46991494 | Msa0503590:intron | 35.0% |
| GTTGTCAATATTGGAGATCA+TGG | - | chr3_4:46991484-46991503 | Msa0503590:intron | 35.0% | |
| AGTTAAGGTGAACCCTAATA+CGG | - | chr3_4:46991674-46991693 | Msa0503590:intron | 35.0% | |
| TACGGTAAAATTCGCAATGT+CGG | - | chr3_4:46991692-46991711 | Msa0503590:intron | 35.0% | |
| !!! | GGGCGATATTTGTTTTATCT+TGG | - | chr3_4:46991714-46991733 | Msa0503590:intron | 35.0% |
| AAAGTAAAGACGGTTCCTAT+AGG | + | chr3_4:46991899-46991918 | None:intergenic | 35.0% | |
| !! | TTTTGAAGAATGAGAGAGAG+AGG | - | chr3_4:46992150-46992169 | Msa0503590:intron | 35.0% |
| TCCATTGTCCTTTACATCAT+TGG | - | chr3_4:46992517-46992536 | Msa0503590:intron | 35.0% | |
| TATCTAGGCCAATGATGTAA+AGG | + | chr3_4:46992528-46992547 | None:intergenic | 35.0% | |
| TATGAAGTGAGATGAGCTTA+TGG | - | chr3_4:46992665-46992684 | Msa0503590:intron | 35.0% | |
| CATGAGACATGAAGTAAGAA+GGG | - | chr3_4:46992692-46992711 | Msa0503590:intron | 35.0% | |
| ! | TGGCTATGGTATTGAATCAT+TGG | + | chr3_4:46992991-46993010 | None:intergenic | 35.0% |
| CATGACTGAAAATTTGGCTA+TGG | + | chr3_4:46993005-46993024 | None:intergenic | 35.0% | |
| AAACACACACAAGAAAGACT+AGG | - | chr3_4:46993206-46993225 | Msa0503590:intron | 35.0% | |
| GTGCAAAATTCAATCAAGCA+GGG | - | chr3_4:46993421-46993440 | Msa0503590:intron | 35.0% | |
| TGCAAAATTCAATCAAGCAG+GGG | - | chr3_4:46993422-46993441 | Msa0503590:intron | 35.0% | |
| AGAATTTCAATAAAGCGTGC+AGG | - | chr3_4:46993457-46993476 | Msa0503590:intron | 35.0% | |
| AAGCATACAGAAACAGGTTT+GGG | - | chr3_4:46993503-46993522 | Msa0503590:intron | 35.0% | |
| ! | ATATGCTGTATCTAATGGGT+CGG | + | chr3_4:46993581-46993600 | None:intergenic | 35.0% |
| GAAAAAAGATGTTGAAGCTC+CGG | + | chr3_4:46993752-46993771 | None:intergenic | 35.0% | |
| GAATCGTTAAACAAGAACAG+AGG | - | chr3_4:46993915-46993934 | Msa0503590:intron | 35.0% | |
| ! | GTTTCTCCGATCTAAAATAC+TGG | + | chr3_4:46993957-46993976 | None:intergenic | 35.0% |
| AGAGAAGATCGTAACAAAAG+CGG | + | chr3_4:46994068-46994087 | None:intergenic | 35.0% | |
| TTGTTACGATCTTCTCTTTC+TGG | - | chr3_4:46994071-46994090 | Msa0503590:intron | 35.0% | |
| TCTTTCTGGATCGATGAATT+TGG | - | chr3_4:46994085-46994104 | Msa0503590:intron | 35.0% | |
| !!! | GAATTTGGTTCGGATTTTAC+AGG | - | chr3_4:46994100-46994119 | Msa0503590:intron | 35.0% |
| !! | GTGATGATTCTGGAATTTCT+GGG | - | chr3_4:46994239-46994258 | Msa0503590:intron | 35.0% |
| GAGAAAGTGGTTATTGTTTC+TGG | - | chr3_4:46994351-46994370 | Msa0503590:intron | 35.0% | |
| TTCAGCTTGTAACAAACTTC+TGG | - | chr3_4:46994478-46994497 | Msa0503590:intron | 35.0% | |
| ACGAACCAACTACTTAAATG+AGG | - | chr3_4:46994646-46994665 | Msa0503590:intron | 35.0% | |
| !! | TGAGTCATTTTGAGTCGTTT+TGG | + | chr3_4:46994734-46994753 | None:intergenic | 35.0% |
| AAATGACTAAAATGCCCCTA+GGG | - | chr3_4:46994865-46994884 | Msa0503590:intron | 35.0% | |
| ! | ACTGACTCAAAATGACTTCA+AGG | - | chr3_4:46994893-46994912 | Msa0503590:intron | 35.0% |
| GAAATGCAAGAAAGATGTCT+TGG | - | chr3_4:46995037-46995056 | Msa0503590:three_prime_UTR | 35.0% | |
| ! | TTTCTTACATTTGAAACCGG+AGG | + | chr3_4:46995429-46995448 | None:intergenic | 35.0% |
| TTGGAATTGTGGCCTTTAAT+AGG | + | chr3_4:46995505-46995524 | None:intergenic | 35.0% | |
| GAGTTTAATGAGGGTAAACT+TGG | + | chr3_4:46995524-46995543 | None:intergenic | 35.0% | |
| ATGCACACATAGTAAGAAAG+TGG | + | chr3_4:46995632-46995651 | None:intergenic | 35.0% | |
| TAGTTCGTGAACTATGATGT+AGG | - | chr3_4:46995725-46995744 | Msa0503590:intron | 35.0% | |
| TAGCTCGTGAATTATGATGT+AGG | - | chr3_4:46995865-46995884 | Msa0503590:intron | 35.0% | |
| AACACTTAATTCACGAGCTA+TGG | + | chr3_4:46995976-46995995 | None:intergenic | 35.0% | |
| CTATTTGGTCATACTTCACA+TGG | - | chr3_4:46996002-46996021 | Msa0503590:intron | 35.0% | |
| !! | ACGTAGTATTGACGAAAAGA+CGG | + | chr3_4:46996194-46996213 | None:intergenic | 35.0% |
| TGGATATTGGAATGTTGCTA+CGG | + | chr3_4:46996359-46996378 | None:intergenic | 35.0% | |
| !! | CTAACATTCACTTTTGCTCA+AGG | + | chr3_4:46996489-46996508 | None:intergenic | 35.0% |
| CTTGAGCAAAAGTGAATGTT+AGG | - | chr3_4:46996487-46996506 | Msa0503590:intron | 35.0% | |
| !!! | TATGCTAAGATAGTTTTGGG+TGG | - | chr3_4:46996719-46996738 | Msa0503590:CDS | 35.0% |
| ATATTCGACCTTGAATGGAT+TGG | - | chr3_4:46996932-46996951 | Msa0503590:CDS | 35.0% | |
| ! | TACAGAACCAAGCTAGATTT+TGG | + | chr3_4:46996985-46997004 | None:intergenic | 35.0% |
| ! | ACTCGAGTCTAGTTTCATCA+GGG | - | chr3_4:46989573-46989592 | Msa0503590:three_prime_UTR | 40.0% |
| TGACATGTCTGGTGGTAAAA+AGG | - | chr3_4:46989843-46989862 | Msa0503590:three_prime_UTR | 40.0% | |
| GACATGTCTGGTGGTAAAAA+GGG | - | chr3_4:46989844-46989863 | Msa0503590:three_prime_UTR | 40.0% | |
| !! | TTGCGAGTTACATTTTGGAG+CGG | - | chr3_4:46989950-46989969 | Msa0503590:three_prime_UTR | 40.0% |
| ! | ATACTCGTTCTAAACATGGG+CGG | - | chr3_4:46990078-46990097 | Msa0503590:three_prime_UTR | 40.0% |
| ! | TGACACACCGACATTGATTA+GGG | + | chr3_4:46990517-46990536 | None:intergenic | 40.0% |
| AATGGGTCCCTACTTTGTTA+TGG | - | chr3_4:46990646-46990665 | Msa0503590:intron | 40.0% | |
| GGTTCCACCATAACAAAGTA+GGG | + | chr3_4:46990656-46990675 | None:intergenic | 40.0% | |
| AGGTTCCACCATAACAAAGT+AGG | + | chr3_4:46990657-46990676 | None:intergenic | 40.0% | |
| ! | CTTTGTTATGGTGGAACCTT+TGG | - | chr3_4:46990658-46990677 | Msa0503590:intron | 40.0% |
| GATGAATAAGTTAGGTTCGG+GGG | - | chr3_4:46990757-46990776 | Msa0503590:intron | 40.0% | |
| GAGAAAGAGATTATCCAAGG+TGG | - | chr3_4:46991137-46991156 | Msa0503590:intron | 40.0% | |
| ! | GTTACCTCTTTCCATCCTTT+TGG | + | chr3_4:46991172-46991191 | None:intergenic | 40.0% |
| ! | GTTGTTTGAGGTGTTATCTG+AGG | - | chr3_4:46991231-46991250 | Msa0503590:intron | 40.0% |
| TCTGGTGTTTCAAGAACAAG+TGG | - | chr3_4:46991393-46991412 | Msa0503590:intron | 40.0% | |
| CTGGTGTTTCAAGAACAAGT+GGG | - | chr3_4:46991394-46991413 | Msa0503590:intron | 40.0% | |
| CCTCATCTCTAGTAACTTGA+AGG | + | chr3_4:46991423-46991442 | None:intergenic | 40.0% | |
| ! | CCTTCAAGTTACTAGAGATG+AGG | - | chr3_4:46991420-46991439 | Msa0503590:intron | 40.0% |
| !! | ACAACAAAAGCACCTTCAAC+TGG | + | chr3_4:46991469-46991488 | None:intergenic | 40.0% |
| AAACCTTATCCCGCTAGATA+GGG | + | chr3_4:46991559-46991578 | None:intergenic | 40.0% | |
| ACGGTAAAATTCGCAATGTC+GGG | - | chr3_4:46991693-46991712 | Msa0503590:intron | 40.0% | |
| !! | TTTTTGGAAGAGAACTACGG+TGG | + | chr3_4:46992086-46992105 | None:intergenic | 40.0% |
| TTCACAATCTTATGCCCTTG+AGG | + | chr3_4:46992176-46992195 | None:intergenic | 40.0% | |
| GCCAATGATGTAAAGGACAA+TGG | + | chr3_4:46992521-46992540 | None:intergenic | 40.0% | |
| GCATGAGACATGAAGTAAGA+AGG | - | chr3_4:46992691-46992710 | Msa0503590:intron | 40.0% | |
| GGTGCAAAATTCAATCAAGC+AGG | - | chr3_4:46993420-46993439 | Msa0503590:intron | 40.0% | |
| GCAAAATTCAATCAAGCAGG+GGG | - | chr3_4:46993423-46993442 | Msa0503590:intron | 40.0% | |
| TTCAATAAAGCGTGCAGGAA+AGG | - | chr3_4:46993462-46993481 | Msa0503590:intron | 40.0% | |
| TCAATAAAGCGTGCAGGAAA+GGG | - | chr3_4:46993463-46993482 | Msa0503590:intron | 40.0% | |
| !! | CAAACCTGTTTCTGTATGCT+TGG | + | chr3_4:46993504-46993523 | None:intergenic | 40.0% |
| CAAGCATACAGAAACAGGTT+TGG | - | chr3_4:46993502-46993521 | Msa0503590:intron | 40.0% | |
| ! | TATGCTGTATCTAATGGGTC+GGG | + | chr3_4:46993580-46993599 | None:intergenic | 40.0% |
| CAGCATATAAGCTGTTGAAC+CGG | - | chr3_4:46993593-46993612 | Msa0503590:intron | 40.0% | |
| TGGAAAATGGTTCCAAGAAC+CGG | + | chr3_4:46993615-46993634 | None:intergenic | 40.0% | |
| ! | AATTTTCACACCGTTTCACG+CGG | - | chr3_4:46993778-46993797 | Msa0503590:intron | 40.0% |
| AAACCGTGAGCAAGAATAAG+AGG | + | chr3_4:46993998-46994017 | None:intergenic | 40.0% | |
| GCAAGGATCGAAAGAAATTG+TGG | + | chr3_4:46994028-46994047 | None:intergenic | 40.0% | |
| GAGAAGATCGTAACAAAAGC+GGG | + | chr3_4:46994067-46994086 | None:intergenic | 40.0% | |
| CTGGATCGATGAATTTGGTT+CGG | - | chr3_4:46994090-46994109 | Msa0503590:intron | 40.0% | |
| AATGCTTGAATCTTGACCTG+TGG | - | chr3_4:46994134-46994153 | Msa0503590:intron | 40.0% | |
| !! | GGTGATGATTCTGGAATTTC+TGG | - | chr3_4:46994238-46994257 | Msa0503590:intron | 40.0% |
| CTTTCTCTCTCTGCAATTTC+AGG | + | chr3_4:46994338-46994357 | None:intergenic | 40.0% | |
| GAAATTGCAGAGAGAGAAAG+TGG | - | chr3_4:46994338-46994357 | Msa0503590:intron | 40.0% | |
| GAAATGACTAAAATGCCCCT+AGG | - | chr3_4:46994864-46994883 | Msa0503590:intron | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | - | chr3_4:46994866-46994885 | Msa0503590:intron | 40.0% | |
| GATGTAGGTCCTGAATCTTT+AGG | - | chr3_4:46995373-46995392 | Msa0503590:three_prime_UTR | 40.0% | |
| TGAGGGTAAACTTGGAATTG+TGG | + | chr3_4:46995516-46995535 | None:intergenic | 40.0% | |
| TCTCTACTACTCCAAGACAA+GGG | - | chr3_4:46995558-46995577 | Msa0503590:intron | 40.0% | |
| ! | TTTCTTACATTTGAGACCGG+AGG | - | chr3_4:46995662-46995681 | Msa0503590:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | - | chr3_4:46995663-46995682 | Msa0503590:intron | 40.0% |
| !!! | AAGTTTTTTGGTACTCCCTC+CGG | + | chr3_4:46995681-46995700 | None:intergenic | 40.0% |
| GTTCAAAAGAGCTGATCACA+GGG | - | chr3_4:46996303-46996322 | Msa0503590:intron | 40.0% | |
| GGAATGTTGCTACGGATAAA+CGG | + | chr3_4:46996351-46996370 | None:intergenic | 40.0% | |
| TTGCATCTGTTGCTGGATAT+TGG | + | chr3_4:46996372-46996391 | None:intergenic | 40.0% | |
| TACACAATTGCATCTGTTGC+TGG | + | chr3_4:46996379-46996398 | None:intergenic | 40.0% | |
| TGCAATTGTGTACCCTTTGA+AGG | - | chr3_4:46996387-46996406 | Msa0503590:intron | 40.0% | |
| AGAGGGAGAGAAATATGTGA+TGG | - | chr3_4:46996414-46996433 | Msa0503590:intron | 40.0% | |
| TAGCATACAACGAGAGTTTG+AGG | + | chr3_4:46996706-46996725 | None:intergenic | 40.0% | |
| ! | GACTCGAGTGTGTTTTTCTG+AGG | + | chr3_4:46989562-46989581 | None:intergenic | 45.0% |
| ! | CACTCGAGTCTAGTTTCATC+AGG | - | chr3_4:46989572-46989591 | Msa0503590:three_prime_UTR | 45.0% |
| ! | TCTCGCAAGCTTTTGCAATC+TGG | + | chr3_4:46989711-46989730 | None:intergenic | 45.0% |
| TTGCAAAAGCTTGCGAGAAC+TGG | - | chr3_4:46989713-46989732 | Msa0503590:three_prime_UTR | 45.0% | |
| TGCAAAAGCTTGCGAGAACT+GGG | - | chr3_4:46989714-46989733 | Msa0503590:three_prime_UTR | 45.0% | |
| TGCCATCAGAAGAGAAGCTT+CGG | - | chr3_4:46989818-46989837 | Msa0503590:three_prime_UTR | 45.0% | |
| AACCGAAGCTTCTCTTCTGA+TGG | + | chr3_4:46989823-46989842 | None:intergenic | 45.0% | |
| ! | AAGCTTCGGTTTGACATGTC+TGG | - | chr3_4:46989832-46989851 | Msa0503590:three_prime_UTR | 45.0% |
| !!! | ATTTTGGAGCGGAAAGCCAT+TGG | - | chr3_4:46989961-46989980 | Msa0503590:three_prime_UTR | 45.0% |
| AGACACACTTAACCCTCCAA+TGG | + | chr3_4:46989980-46989999 | None:intergenic | 45.0% | |
| ACAGGGTCCCTAATCAATGT+CGG | - | chr3_4:46990507-46990526 | Msa0503590:intron | 45.0% | |
| ! | GTGACACACCGACATTGATT+AGG | + | chr3_4:46990518-46990537 | None:intergenic | 45.0% |
| AATAAGTTAGGTTCGGGGGA+AGG | - | chr3_4:46990761-46990780 | Msa0503590:intron | 45.0% | |
| !!! | TTCCATCCTTTTGGCTTGTC+TGG | + | chr3_4:46991163-46991182 | None:intergenic | 45.0% |
| CAAGCCAAAAGGATGGAAAG+AGG | - | chr3_4:46991165-46991184 | Msa0503590:intron | 45.0% | |
| ! | TGAGGTGTTATCTGAGGCTA+TGG | - | chr3_4:46991237-46991256 | Msa0503590:intron | 45.0% |
| ! | GAGGTGTTATCTGAGGCTAT+GGG | - | chr3_4:46991238-46991257 | Msa0503590:intron | 45.0% |
| ! | AGGTGTTATCTGAGGCTATG+GGG | - | chr3_4:46991239-46991258 | Msa0503590:intron | 45.0% |
| !! | CAAGAGTAAGGTCAGGTTGA+GGG | + | chr3_4:46991339-46991358 | None:intergenic | 45.0% |
| TTCAAGCCAAGAGTAAGGTC+AGG | + | chr3_4:46991346-46991365 | None:intergenic | 45.0% | |
| GTCGTTTCAAGCCAAGAGTA+AGG | + | chr3_4:46991351-46991370 | None:intergenic | 45.0% | |
| TTGAAACGACACACTGATCC+TGG | - | chr3_4:46991361-46991380 | Msa0503590:intron | 45.0% | |
| GTGTTTCAAGAACAAGTGGG+TGG | - | chr3_4:46991397-46991416 | Msa0503590:intron | 45.0% | |
| ATCACTGTTCCTCCAGTTGA+AGG | - | chr3_4:46991454-46991473 | Msa0503590:intron | 45.0% | |
| !! | ACAAAAGCACCTTCAACTGG+AGG | + | chr3_4:46991466-46991485 | None:intergenic | 45.0% |
| CAAACCTTATCCCGCTAGAT+AGG | + | chr3_4:46991560-46991579 | None:intergenic | 45.0% | |
| CTATCTAGCGGGATAAGGTT+TGG | - | chr3_4:46991558-46991577 | Msa0503590:intron | 45.0% | |
| CGGTAAAATTCGCAATGTCG+GGG | - | chr3_4:46991694-46991713 | Msa0503590:intron | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | - | chr3_4:46991817-46991836 | Msa0503590:intron | 45.0% | |
| TTGCCTACATACCCGGTTAA+GGG | - | chr3_4:46992053-46992072 | Msa0503590:intron | 45.0% | |
| GTGGATTTGATCCCTTAACC+GGG | + | chr3_4:46992067-46992086 | None:intergenic | 45.0% | |
| ! | GGTGGATTTGATCCCTTAAC+CGG | + | chr3_4:46992068-46992087 | None:intergenic | 45.0% |
| TGTGATGTGTGTGCATGTGT+CGG | - | chr3_4:46992455-46992474 | Msa0503590:intron | 45.0% | |
| CAATAAAGCGTGCAGGAAAG+GGG | - | chr3_4:46993464-46993483 | Msa0503590:intron | 45.0% | |
| AATAAAGCGTGCAGGAAAGG+GGG | - | chr3_4:46993465-46993484 | Msa0503590:intron | 45.0% | |
| AGCACCAAGCATACAGAAAC+AGG | - | chr3_4:46993497-46993516 | Msa0503590:intron | 45.0% | |
| GCCTAGAGAGATGAAGGATT+GGG | - | chr3_4:46993525-46993544 | Msa0503590:intron | 45.0% | |
| ACCCAATCCTTCATCTCTCT+AGG | + | chr3_4:46993529-46993548 | None:intergenic | 45.0% | |
| AGAGAGATGAAGGATTGGGT+CGG | - | chr3_4:46993529-46993548 | Msa0503590:intron | 45.0% | |
| ! | TAAGCTGTTGAACCGGTTCT+TGG | - | chr3_4:46993600-46993619 | Msa0503590:intron | 45.0% |
| GAGAAGACGAATTGCAGAGA+AGG | + | chr3_4:46993682-46993701 | None:intergenic | 45.0% | |
| GAGTGAAATTCCGCGTGAAA+CGG | + | chr3_4:46993791-46993810 | None:intergenic | 45.0% | |
| TAAGAGGACGTGGAGTCTAA+AGG | + | chr3_4:46993982-46994001 | None:intergenic | 45.0% | |
| TGAGCAAGAATAAGAGGACG+TGG | + | chr3_4:46993992-46994011 | None:intergenic | 45.0% | |
| CGTCCTCTTATTCTTGCTCA+CGG | - | chr3_4:46993992-46994011 | Msa0503590:intron | 45.0% | |
| CTTGACCTGTGGATGTTGAA+CGG | - | chr3_4:46994145-46994164 | Msa0503590:intron | 45.0% | |
| CACGAAATTTCGACAGAGAG+AGG | + | chr3_4:46994685-46994704 | None:intergenic | 45.0% | |
| TGAAATGACCAAAATGCCCC+TGG | - | chr3_4:46994705-46994724 | Msa0503590:intron | 45.0% | |
| GAAATGACCAAAATGCCCCT+GGG | - | chr3_4:46994706-46994725 | Msa0503590:intron | 45.0% | |
| AAATGACCAAAATGCCCCTG+GGG | - | chr3_4:46994707-46994726 | Msa0503590:intron | 45.0% | |
| GTCTCTACTACTCCAAGACA+AGG | - | chr3_4:46995557-46995576 | Msa0503590:intron | 45.0% | |
| GGTTCAAAAGAGCTGATCAC+AGG | - | chr3_4:46996302-46996321 | Msa0503590:intron | 45.0% | |
| ! | TACCCTTTGAAGGTCAGAGA+GGG | - | chr3_4:46996397-46996416 | Msa0503590:intron | 45.0% |
| GGGAGAGAAATATGTGATGG+AGG | - | chr3_4:46996417-46996436 | Msa0503590:intron | 45.0% | |
| ! | CCTCAATTTTTGCCTTCTGC+AGG | + | chr3_4:46996515-46996534 | None:intergenic | 45.0% |
| CCTGCAGAAGGCAAAAATTG+AGG | - | chr3_4:46996512-46996531 | Msa0503590:intron | 45.0% | |
| !!! | TAGTTTTGGGTGGAGCTTCT+TGG | - | chr3_4:46996729-46996748 | Msa0503590:CDS | 45.0% |
| !!! | AAAATTTATTATTTTTGAAT+TGG | - | chr3_4:46990804-46990823 | Msa0503590:intron | 5.0% |
| !!! | AAATTTTAGAATAATAAAAT+TGG | - | chr3_4:46990952-46990971 | Msa0503590:intron | 5.0% |
| !! | AAATGTAATTAAAATAAAAT+TGG | - | chr3_4:46994561-46994580 | Msa0503590:intron | 5.0% |
| !!! | TTTTTATAATAACTTAAATA+TGG | - | chr3_4:46995601-46995620 | Msa0503590:intron | 5.0% |
| !! | TTAAAATTAAATGTAAAATA+GGG | + | chr3_4:46997012-46997031 | None:intergenic | 5.0% |
| !! | ATTAAAATTAAATGTAAAAT+AGG | + | chr3_4:46997013-46997032 | None:intergenic | 5.0% |
| !!! | TTTTAATAAATGAAATTAAT+AGG | - | chr3_4:46997026-46997045 | Msa0503590:five_prime_UTR | 5.0% |
| !! | GACGAAAGCACTCGTCCAAA+AGG | - | chr3_4:46989595-46989614 | Msa0503590:three_prime_UTR | 50.0% |
| GGTCGCAAATCTCTTCTCTG+CGG | + | chr3_4:46989690-46989709 | None:intergenic | 50.0% | |
| GCAAAAGCTTGCGAGAACTG+GGG | - | chr3_4:46989715-46989734 | Msa0503590:three_prime_UTR | 50.0% | |
| CCACGCCATGATCAACAACT+TGG | + | chr3_4:46989747-46989766 | None:intergenic | 50.0% | |
| CCAAGTTGTTGATCATGGCG+TGG | - | chr3_4:46989744-46989763 | Msa0503590:three_prime_UTR | 50.0% | |
| ! | CTTCGGTTTGACATGTCTGG+TGG | - | chr3_4:46989835-46989854 | Msa0503590:three_prime_UTR | 50.0% |
| GTCTGGTGGTAAAAAGGGTG+TGG | - | chr3_4:46989849-46989868 | Msa0503590:three_prime_UTR | 50.0% | |
| ! | GGGTCCCTACTTTGTTATGG+TGG | - | chr3_4:46990649-46990668 | Msa0503590:intron | 50.0% |
| ! | GTTATGGTGGAACCTTTGGC+TGG | - | chr3_4:46990662-46990681 | Msa0503590:intron | 50.0% |
| !!! | GGTCAGGTTGAGGGCATTTT+GGG | + | chr3_4:46991330-46991349 | None:intergenic | 50.0% |
| !!! | AGGTCAGGTTGAGGGCATTT+TGG | + | chr3_4:46991331-46991350 | None:intergenic | 50.0% |
| ! | CCAAGAGTAAGGTCAGGTTG+AGG | + | chr3_4:46991340-46991359 | None:intergenic | 50.0% |
| CCTCAACCTGACCTTACTCT+TGG | - | chr3_4:46991337-46991356 | Msa0503590:intron | 50.0% | |
| TGATCCTGGCACAATCACTC+TGG | - | chr3_4:46991375-46991394 | Msa0503590:intron | 50.0% | |
| AACACCAGAGTGATTGTGCC+AGG | + | chr3_4:46991382-46991401 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCTATCTAG+CGG | - | chr3_4:46991546-46991565 | Msa0503590:intron | 50.0% | |
| CTTATCCCGCTAGATAGGGT+CGG | + | chr3_4:46991555-46991574 | None:intergenic | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | - | chr3_4:46991822-46991841 | Msa0503590:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | - | chr3_4:46991840-46991859 | Msa0503590:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | - | chr3_4:46991845-46991864 | Msa0503590:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | - | chr3_4:46991852-46991871 | Msa0503590:intron | 50.0% |
| GCGCGCGTAGAAAGTAAAGA+CGG | + | chr3_4:46991909-46991928 | None:intergenic | 50.0% | |
| TGGTTCCTTGCCTACATACC+CGG | - | chr3_4:46992046-46992065 | Msa0503590:intron | 50.0% | |
| CTTAACCGGGTATGTAGGCA+AGG | + | chr3_4:46992054-46992073 | None:intergenic | 50.0% | |
| CTTGCCTACATACCCGGTTA+AGG | - | chr3_4:46992052-46992071 | Msa0503590:intron | 50.0% | |
| GATCCCTTAACCGGGTATGT+AGG | + | chr3_4:46992059-46992078 | None:intergenic | 50.0% | |
| AATGAGAGAGAGAGGCCTCA+AGG | - | chr3_4:46992158-46992177 | Msa0503590:intron | 50.0% | |
| ATGAGAGAGAGAGGCCTCAA+GGG | - | chr3_4:46992159-46992178 | Msa0503590:intron | 50.0% | |
| ATAAAGCGTGCAGGAAAGGG+GGG | - | chr3_4:46993466-46993485 | Msa0503590:intron | 50.0% | |
| GTTTGGGCCTAGAGAGATGA+AGG | - | chr3_4:46993519-46993538 | Msa0503590:intron | 50.0% | |
| GGCCTAGAGAGATGAAGGAT+TGG | - | chr3_4:46993524-46993543 | Msa0503590:intron | 50.0% | |
| ! | TTGGGTCGGTTCAATCCAAC+CGG | - | chr3_4:46993543-46993562 | Msa0503590:intron | 50.0% |
| TCGGTTCAATCCAACCGGTT+TGG | - | chr3_4:46993548-46993567 | Msa0503590:intron | 50.0% | |
| TCCGACGAGAAGTGAGATTC+CGG | - | chr3_4:46993700-46993719 | Msa0503590:intron | 50.0% | |
| ACCGGAATCTCACTTCTCGT+CGG | + | chr3_4:46993704-46993723 | None:intergenic | 50.0% | |
| GAGAAGTGAGATTCCGGTGA+CGG | - | chr3_4:46993706-46993725 | Msa0503590:intron | 50.0% | |
| !! | TGAGATTCCGGTGACGGAAA+CGG | - | chr3_4:46993712-46993731 | Msa0503590:intron | 50.0% |
| !! | GCAAGAAGGATCGATTCGCA+AGG | + | chr3_4:46994045-46994064 | None:intergenic | 50.0% |
| CGTAACAAAAGCGGGCAAGA+AGG | + | chr3_4:46994059-46994078 | None:intergenic | 50.0% | |
| CATCACCGTTCAACATCCAC+AGG | + | chr3_4:46994153-46994172 | None:intergenic | 50.0% | |
| TGTGACAGTGTTGTGATGCG+TGG | - | chr3_4:46994211-46994230 | Msa0503590:intron | 50.0% | |
| AGTGTTGTGATGCGTGGCTA+TGG | - | chr3_4:46994217-46994236 | Msa0503590:intron | 50.0% | |
| ! | CGTGGCTATGGTGATGATTC+TGG | - | chr3_4:46994229-46994248 | Msa0503590:intron | 50.0% |
| ATGAATCCTCTCTTGCCACG+TGG | - | chr3_4:46994388-46994407 | Msa0503590:intron | 50.0% | |
| GTGTGCACTCTGGACAAATC+AGG | - | chr3_4:46994440-46994459 | Msa0503590:intron | 50.0% | |
| GTTACAAGCTGAAGCACACG+TGG | + | chr3_4:46994471-46994490 | None:intergenic | 50.0% | |
| !! | TTGAGTCGTTTTGGTCCCCA+GGG | + | chr3_4:46994725-46994744 | None:intergenic | 50.0% |
| !! | TTTGAGTCGTTTTGGTCCCC+AGG | + | chr3_4:46994726-46994745 | None:intergenic | 50.0% |
| TTGAGTCAGTCTAGCCCCTA+GGG | + | chr3_4:46994883-46994902 | None:intergenic | 50.0% | |
| TTTGAGTCAGTCTAGCCCCT+AGG | + | chr3_4:46994884-46994903 | None:intergenic | 50.0% | |
| ! | GTACCCTTTGAAGGTCAGAG+AGG | - | chr3_4:46996396-46996415 | Msa0503590:intron | 50.0% |
| CTCCCTCTCTGACCTTCAAA+GGG | + | chr3_4:46996402-46996421 | None:intergenic | 50.0% | |
| TCTCCCTCTCTGACCTTCAA+AGG | + | chr3_4:46996403-46996422 | None:intergenic | 50.0% | |
| GAATGTTAGGGACCTGCAGA+AGG | - | chr3_4:46996500-46996519 | Msa0503590:intron | 50.0% | |
| ! | TGGATGGAAAGGGGTGTAAG+TGG | - | chr3_4:46996858-46996877 | Msa0503590:CDS | 50.0% |
| TTGGAGCGGAAAGCCATTGG+AGG | - | chr3_4:46989964-46989983 | Msa0503590:three_prime_UTR | 55.0% | |
| TGGAGCGGAAAGCCATTGGA+GGG | - | chr3_4:46989965-46989984 | Msa0503590:three_prime_UTR | 55.0% | |
| ! | ATGGTGGAACCTTTGGCTGG+AGG | - | chr3_4:46990665-46990684 | Msa0503590:intron | 55.0% |
| TGGTGGAACCTTTGGCTGGA+GGG | - | chr3_4:46990666-46990685 | Msa0503590:intron | 55.0% | |
| !! | TTTGGCTTGTCTGGCCACCT+TGG | + | chr3_4:46991154-46991173 | None:intergenic | 55.0% |
| AGGTGGCCAGACAAGCCAAA+AGG | - | chr3_4:46991154-46991173 | Msa0503590:intron | 55.0% | |
| GGCCAGACAAGCCAAAAGGA+TGG | - | chr3_4:46991158-46991177 | Msa0503590:intron | 55.0% | |
| CTAGAGATGAGGGTGAGACG+TGG | - | chr3_4:46991431-46991450 | Msa0503590:intron | 55.0% | |
| GCTAGATAGGGTCGGCTACA+TGG | + | chr3_4:46991547-46991566 | None:intergenic | 55.0% | |
| TGTAGCCGACCCTATCTAGC+GGG | - | chr3_4:46991547-46991566 | Msa0503590:intron | 55.0% | |
| CGACCCTATCTAGCGGGATA+AGG | - | chr3_4:46991553-46991572 | Msa0503590:intron | 55.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | - | chr3_4:46991823-46991842 | Msa0503590:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | + | chr3_4:46991827-46991846 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | + | chr3_4:46991844-46991863 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | - | chr3_4:46991841-46991860 | Msa0503590:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | - | chr3_4:46992467-46992486 | Msa0503590:intron | 55.0% |
| ! | GCTTGTGTCGGTGCTTGTGT+CGG | - | chr3_4:46992479-46992498 | Msa0503590:intron | 55.0% |
| TAAAGCGTGCAGGAAAGGGG+GGG | - | chr3_4:46993467-46993486 | Msa0503590:intron | 55.0% | |
| CGGGTTTCATCCAAACCGGT+TGG | + | chr3_4:46993561-46993580 | None:intergenic | 55.0% | |
| GGGTCGGGTTTCATCCAAAC+CGG | + | chr3_4:46993565-46993584 | None:intergenic | 55.0% | |
| TCATCACCACGTGGCAAGAG+AGG | + | chr3_4:46994397-46994416 | None:intergenic | 55.0% | |
| ! | TCTCTTGCCACGTGGTGATG+AGG | - | chr3_4:46994396-46994415 | Msa0503590:intron | 55.0% |
| !!! | TTTGGTCCCCAGGGGCATTT+TGG | + | chr3_4:46994716-46994735 | None:intergenic | 55.0% |
| !! | TGAGTCGTTTTGGTCCCCAG+GGG | + | chr3_4:46994724-46994743 | None:intergenic | 55.0% |
| TGAGTCAGTCTAGCCCCTAG+GGG | + | chr3_4:46994882-46994901 | None:intergenic | 55.0% | |
| AAGAGCTGATCACAGGGCAG+TGG | - | chr3_4:46996309-46996328 | Msa0503590:intron | 55.0% | |
| CTAGCCGGAATCGACGACGT+TGG | - | chr3_4:46989661-46989680 | Msa0503590:three_prime_UTR | 60.0% | |
| !! | GCCACCAACGTCGTCGATTC+CGG | + | chr3_4:46989668-46989687 | None:intergenic | 60.0% |
| GGTGGAACCTTTGGCTGGAG+GGG | - | chr3_4:46990667-46990686 | Msa0503590:intron | 60.0% | |
| GTGGAACCTTTGGCTGGAGG+GGG | - | chr3_4:46990668-46990687 | Msa0503590:intron | 60.0% | |
| AAGACTCCCCCTCCAGCCAA+AGG | + | chr3_4:46990677-46990696 | None:intergenic | 60.0% | |
| AGTTAGGTTCGGGGGAAGGC+AGG | - | chr3_4:46990765-46990784 | Msa0503590:intron | 60.0% | |
| GTTAGGTTCGGGGGAAGGCA+GGG | - | chr3_4:46990766-46990785 | Msa0503590:intron | 60.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | + | chr3_4:46991828-46991847 | None:intergenic | 60.0% | |
| ! | CTTGCCACGTGGTGATGAGG+TGG | - | chr3_4:46994399-46994418 | Msa0503590:intron | 60.0% |
| GCCGGAATCGACGACGTTGG+TGG | - | chr3_4:46989664-46989683 | Msa0503590:three_prime_UTR | 65.0% | |
| !! | TCCGGTGACGGAAACGGCTC+CGG | - | chr3_4:46993718-46993737 | Msa0503590:intron | 65.0% |
| AGGGCCACCTCATCACCACG+TGG | + | chr3_4:46994406-46994425 | None:intergenic | 65.0% | |
| GCCGGAGCCGTTTCCGTCAC+CGG | + | chr3_4:46993722-46993741 | None:intergenic | 70.0% | |
| TGACGGAAACGGCTCCGGCG+CGG | - | chr3_4:46993723-46993742 | Msa0503590:intron | 70.0% | |
| TGAAGCTCCGGCCACCGCGC+CGG | + | chr3_4:46993740-46993759 | None:intergenic | 75.0% | |
| ! | CGGAAACGGCTCCGGCGCGG+TGG | - | chr3_4:46993726-46993745 | Msa0503590:intron | 80.0% |
| ! | AACGGCTCCGGCGCGGTGGC+CGG | - | chr3_4:46993730-46993749 | Msa0503590:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 46989439 | 46997061 | 46989439 | ID=Msa0503590;Name=Msa0503590 |
| chr3_4 | mRNA | 46989439 | 46997061 | 46989439 | ID=Msa0503590-mRNA-1;Parent=Msa0503590;Name=Msa0503590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=81|0.5|0.66|1|0|1|3|1205|119 |
| chr3_4 | exon | 46989439 | 46990214 | 46989439 | ID=Msa0503590-mRNA-1:exon:10052;Parent=Msa0503590-mRNA-1 |
| chr3_4 | exon | 46994990 | 46995418 | 46994990 | ID=Msa0503590-mRNA-1:exon:10051;Parent=Msa0503590-mRNA-1 |
| chr3_4 | exon | 46996621 | 46997061 | 46996621 | ID=Msa0503590-mRNA-1:exon:10050;Parent=Msa0503590-mRNA-1 |
| chr3_4 | five_prime_UTR | 46996981 | 46997061 | 46996981 | ID=Msa0503590-mRNA-1:five_prime_utr;Parent=Msa0503590-mRNA-1 |
| chr3_4 | CDS | 46996621 | 46996980 | 46996621 | ID=Msa0503590-mRNA-1:cds;Parent=Msa0503590-mRNA-1 |
| chr3_4 | three_prime_UTR | 46994990 | 46995418 | 46994990 | ID=Msa0503590-mRNA-1:three_prime_utr;Parent=Msa0503590-mRNA-1 |
| chr3_4 | three_prime_UTR | 46989439 | 46990214 | 46989439 | ID=Msa0503590-mRNA-1:three_prime_utr;Parent=Msa0503590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
