AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0455290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455290 MtrunA17_Chr3g0102041 87.425 334 27 3 4 323 1 333 0.0 591
Msa0455290 MtrunA17_Chr8g0371931 76.048 334 65 3 4 323 1 333 0.0 530
Msa0455290 MtrunA17_Chr8g0371921 76.048 334 65 3 4 323 1 333 0.0 525
Msa0455290 MtrunA17_Chr5g0405411 70.997 331 81 3 4 320 1 330 3.49e-175 489
Msa0455290 MtrunA17_Chr8g0345831 37.898 314 162 8 1 293 1 302 2.80e-64 206
Msa0455290 MtrunA17_Chr3g0109041 34.354 294 167 6 23 295 25 313 2.81e-57 189
Msa0455290 MtrunA17_Chr3g0128001 36.000 325 180 10 19 325 15 329 6.11e-57 187
Msa0455290 MtrunA17_Chr7g0239121 34.513 339 198 10 6 325 12 345 6.53e-56 185
Msa0455290 MtrunA17_Chr3g0113641 34.796 319 186 8 16 315 23 338 5.55e-55 183
Msa0455290 MtrunA17_Chr7g0239101 34.169 319 189 9 23 325 35 348 1.13e-54 182
Msa0455290 MtrunA17_Chr7g0242551 35.275 309 159 9 18 295 25 323 2.44e-54 181
Msa0455290 MtrunA17_Chr7g0239111 33.956 321 191 9 21 325 33 348 2.62e-54 181
Msa0455290 MtrunA17_Chr5g0437181 35.692 325 175 9 16 315 22 337 4.97e-54 180
Msa0455290 MtrunA17_Chr4g0006371 35.331 317 159 8 17 295 23 331 8.62e-54 180
Msa0455290 MtrunA17_Chr1g0179801 34.106 302 158 9 14 293 50 332 2.32e-50 171
Msa0455290 MtrunA17_Chr2g0296371 34.343 297 168 9 18 294 27 316 1.12e-49 169
Msa0455290 MtrunA17_Chr5g0412671 33.129 326 188 9 18 324 14 328 1.38e-48 166
Msa0455290 MtrunA17_Chr7g0250511 32.423 293 177 9 17 293 23 310 9.30e-48 164
Msa0455290 MtrunA17_Chr7g0239071 36.330 267 152 7 75 325 29 293 1.98e-47 162
Msa0455290 MtrunA17_Chr5g0412681 33.123 317 174 10 27 324 18 315 2.09e-46 160
Msa0455290 MtrunA17_Chr5g0424201 33.898 295 170 8 17 293 18 305 2.98e-46 159
Msa0455290 MtrunA17_Chr5g0412651 33.010 309 179 8 18 307 14 313 4.21e-46 159
Msa0455290 MtrunA17_Chr7g0239821 30.178 338 213 9 6 325 25 357 6.92e-46 159
Msa0455290 MtrunA17_Chr8g0375601 30.556 288 181 6 23 293 26 311 8.64e-46 159
Msa0455290 MtrunA17_Chr5g0424211 32.581 310 176 9 7 293 6 305 1.33e-45 158
Msa0455290 MtrunA17_Chr7g0220001 34.686 271 149 9 43 295 41 301 1.92e-45 157
Msa0455290 MtrunA17_Chr3g0087031 32.776 299 178 9 43 324 60 352 2.13e-45 158
Msa0455290 MtrunA17_Chr1g0184101 32.313 294 173 7 18 293 13 298 5.67e-45 156
Msa0455290 MtrunA17_Chr3g0121141 33.459 266 158 6 41 293 2 261 3.78e-44 153
Msa0455290 MtrunA17_Chr7g0220011 32.323 297 172 11 17 295 14 299 3.88e-44 154
Msa0455290 MtrunA17_Chr5g0439011 33.840 263 155 6 44 293 6 262 4.46e-44 153
Msa0455290 MtrunA17_Chr8g0375571 33.091 275 164 8 36 293 38 309 9.31e-44 153
Msa0455290 MtrunA17_Chr1g0184161 31.894 301 178 9 18 300 14 305 1.15e-43 153
Msa0455290 MtrunA17_Chr8g0375671 31.970 269 163 7 42 293 51 316 1.20e-43 153
Msa0455290 MtrunA17_Chr3g0114861 33.110 299 171 8 15 294 13 301 1.40e-43 152
Msa0455290 MtrunA17_Chr4g0066121 33.688 282 158 9 22 284 41 312 1.77e-43 153
Msa0455290 MtrunA17_Chr5g0423251 29.582 311 198 8 31 325 35 340 2.45e-43 152
Msa0455290 MtrunA17_Chr7g0232161 36.364 242 134 8 42 268 59 295 3.48e-43 151
Msa0455290 MtrunA17_Chr5g0398291 33.110 299 169 8 22 291 17 313 4.87e-43 151
Msa0455290 MtrunA17_Chr7g0265221 32.028 281 159 8 40 293 64 339 5.14e-43 152
Msa0455290 MtrunA17_Chr1g0162361 31.392 309 179 7 19 301 4 305 6.10e-43 151
Msa0455290 MtrunA17_Chr3g0126741 34.686 271 149 8 43 293 59 321 6.72e-43 151
Msa0455290 MtrunA17_Chr1g0162191 31.803 305 180 7 7 294 17 310 9.36e-43 151
Msa0455290 MtrunA17_Chr8g0365241 30.634 284 176 7 27 294 41 319 1.04e-42 151
Msa0455290 MtrunA17_Chr6g0455481 30.746 335 203 10 1 316 1 325 1.07e-42 150
Msa0455290 MtrunA17_Chr2g0311701 30.935 278 166 7 23 282 48 317 1.28e-42 151
Msa0455290 MtrunA17_Chr5g0420981 30.970 268 166 6 42 294 52 315 1.69e-42 150
Msa0455290 MtrunA17_Chr1g0184111 33.333 294 174 8 18 295 13 300 3.40e-42 149
Msa0455290 MtrunA17_Chr4g0045411 30.435 299 182 5 21 295 10 306 3.84e-42 149
Msa0455290 MtrunA17_Chr4g0050031 31.765 340 194 12 7 317 23 353 9.08e-42 148
Msa0455290 MtrunA17_Chr1g0184151 30.164 305 176 9 9 293 11 298 1.01e-41 147
Msa0455290 MtrunA17_Chr5g0423191 30.128 312 195 9 31 325 35 340 1.79e-41 147
Msa0455290 MtrunA17_Chr8g0336751 34.510 255 146 5 43 282 94 342 2.42e-41 148
Msa0455290 MtrunA17_Chr8g0370711 30.147 272 171 6 39 294 48 316 2.93e-41 147
Msa0455290 MtrunA17_Chr3g0114871 33.068 251 152 5 18 259 17 260 4.62e-41 144
Msa0455290 MtrunA17_Chr5g0421011 29.021 286 185 6 24 293 24 307 6.77e-41 146
Msa0455290 MtrunA17_Chr8g0364471 32.384 281 143 6 33 282 51 315 1.27e-40 145
Msa0455290 MtrunA17_Chr1g0162351 28.896 308 186 5 19 295 47 352 1.34e-40 146
Msa0455290 MtrunA17_Chr1g0204181 33.935 277 153 8 42 293 58 329 1.36e-40 145
Msa0455290 MtrunA17_Chr8g0375681 32.759 232 139 5 77 293 15 244 1.46e-40 143
Msa0455290 MtrunA17_Chr5g0420951 31.022 274 164 7 38 293 48 314 1.64e-40 145
Msa0455290 MtrunA17_Chr2g0314381 31.250 272 169 6 39 295 73 341 1.85e-40 145
Msa0455290 MtrunA17_Chr2g0289341 31.579 266 163 6 41 293 2 261 1.89e-40 144
Msa0455290 MtrunA17_Chr5g0420901 31.136 273 168 5 36 293 39 306 2.19e-40 144
Msa0455290 MtrunA17_Chr1g0162321 28.571 308 187 5 19 295 47 352 2.42e-40 145
Msa0455290 MtrunA17_Chr8g0336631 31.955 266 156 6 34 282 53 310 2.46e-40 144
Msa0455290 MtrunA17_Chr5g0426891 32.895 304 162 10 11 293 19 301 2.74e-40 144
Msa0455290 MtrunA17_Chr1g0184121 30.693 303 185 8 12 295 4 300 4.49e-40 143
Msa0455290 MtrunA17_Chr1g0184241 30.717 293 170 7 23 295 49 328 6.50e-40 144
Msa0455290 MtrunA17_Chr3g0125201 32.441 299 179 9 43 325 3 294 1.46e-39 141
Msa0455290 MtrunA17_Chr4g0045451 29.412 306 185 9 19 295 4 307 1.63e-39 142
Msa0455290 MtrunA17_Chr1g0187811 30.037 273 165 5 43 295 188 454 2.36e-39 144
Msa0455290 MtrunA17_Chr2g0311681 31.228 285 170 7 13 282 38 311 2.37e-39 142
Msa0455290 MtrunA17_Chr1g0187831 31.373 255 154 4 43 282 70 318 2.81e-39 142
Msa0455290 MtrunA17_Chr3g0145171 28.622 283 182 8 39 304 48 327 3.47e-39 141
Msa0455290 MtrunA17_Chr2g0311741 32.234 273 163 6 39 295 23 289 3.53e-39 140
Msa0455290 MtrunA17_Chr5g0421101 29.496 278 176 5 31 293 35 307 5.06e-39 141
Msa0455290 MtrunA17_Chr8g0370721 30.147 272 171 7 39 294 48 316 5.27e-39 141
Msa0455290 MtrunA17_Chr1g0187821 30.337 267 156 6 34 282 61 315 5.93e-39 141
Msa0455290 MtrunA17_Chr7g0225881 33.708 267 146 8 43 287 67 324 7.06e-39 141
Msa0455290 MtrunA17_Chr7g0235951 31.970 269 150 7 43 290 67 323 1.09e-38 140
Msa0455290 MtrunA17_Chr5g0420941 30.216 278 174 5 31 293 33 305 1.44e-38 139
Msa0455290 MtrunA17_Chr8g0336761 33.955 268 147 9 34 282 53 309 2.29e-38 139
Msa0455290 MtrunA17_Chr8g0336781 33.462 260 144 9 43 282 95 345 2.59e-38 140
Msa0455290 MtrunA17_Chr4g0055591 31.538 260 142 7 43 282 61 304 3.44e-38 139
Msa0455290 MtrunA17_Chr2g0314401 30.337 267 168 5 42 293 50 313 6.07e-38 138
Msa0455290 MtrunA17_Chr2g0311761 33.074 257 148 7 43 282 68 317 6.28e-38 138
Msa0455290 MtrunA17_Chr6g0472861 33.462 260 142 7 43 282 70 318 1.17e-37 138
Msa0455290 MtrunA17_Chr5g0421041 28.667 300 193 8 42 325 44 338 1.25e-37 137
Msa0455290 MtrunA17_Chr8g0348081 31.343 268 154 9 34 282 53 309 1.40e-37 137
Msa0455290 MtrunA17_Chr8g0336851 32.567 261 144 9 43 282 60 309 1.57e-37 137
Msa0455290 MtrunA17_Chr4g0045441 29.085 306 186 7 19 295 4 307 1.69e-37 137
Msa0455290 MtrunA17_Chr3g0145181 30.292 274 171 6 39 294 45 316 1.81e-37 137
Msa0455290 MtrunA17_Chr2g0311691 30.980 255 155 6 43 282 63 311 2.73e-37 137
Msa0455290 MtrunA17_Chr4g0045471 28.664 307 187 9 19 295 4 308 3.93e-37 136
Msa0455290 MtrunA17_Chr5g0423221 28.339 307 198 8 36 325 64 365 4.46e-37 136
Msa0455290 MtrunA17_Chr2g0311711 30.588 255 156 5 43 282 67 315 5.09e-37 136
Msa0455290 MtrunA17_Chr2g0314391 30.112 269 170 6 42 295 69 334 5.93e-37 136
Msa0455290 MtrunA17_Chr2g0311831 33.721 258 144 5 43 282 68 316 1.45e-36 135
Msa0455290 MtrunA17_Chr5g0423201 29.221 308 194 9 36 325 40 341 1.79e-36 134
Msa0455290 MtrunA17_Chr8g0375701 31.338 284 172 8 27 295 41 316 1.84e-36 134
Msa0455290 MtrunA17_Chr2g0311631 30.797 276 160 9 42 294 54 321 3.06e-36 134
Msa0455290 MtrunA17_Chr6g0474391 34.800 250 140 6 65 293 87 334 3.66e-36 134
Msa0455290 MtrunA17_Chr3g0145201 31.855 248 150 5 64 294 706 951 1.83e-35 136
Msa0455290 MtrunA17_Chr3g0093761 30.037 273 149 8 43 291 56 310 9.54e-35 129
Msa0455290 MtrunA17_Chr8g0336861 29.658 263 158 8 39 282 56 310 1.04e-34 130
Msa0455290 MtrunA17_Chr4g0045431 28.197 305 188 8 19 294 4 306 3.42e-34 128
Msa0455290 MtrunA17_Chr4g0064781 30.116 259 158 6 43 285 50 301 3.83e-34 128
Msa0455290 MtrunA17_Chr5g0421091 30.303 264 163 6 36 283 38 296 4.10e-34 128
Msa0455290 MtrunA17_Chr3g0093741 30.147 272 151 7 43 291 56 311 6.32e-34 127
Msa0455290 MtrunA17_Chr4g0011311 31.839 223 140 3 43 259 67 283 1.68e-33 125
Msa0455290 MtrunA17_Chr1g0191201 30.321 343 195 12 13 316 16 353 1.95e-33 126
Msa0455290 MtrunA17_Chr2g0311861 32.031 256 131 7 43 282 64 292 3.87e-33 125
Msa0455290 MtrunA17_Chr2g0332191 30.435 253 146 7 65 293 66 312 4.02e-33 125
Msa0455290 MtrunA17_Chr7g0265351 30.037 273 168 6 37 294 33 297 8.91e-33 124
Msa0455290 MtrunA17_Chr1g0167951 32.443 262 149 6 39 282 49 300 9.41e-33 124
Msa0455290 MtrunA17_Chr2g0311921 31.660 259 149 9 43 282 54 303 1.37e-32 124
Msa0455290 MtrunA17_Chr1g0167961 31.636 275 156 9 43 295 69 333 1.42e-32 124
Msa0455290 MtrunA17_Chr8g0354261 30.216 278 169 9 23 282 48 318 1.92e-32 124
Msa0455290 MtrunA17_Chr8g0351101 31.169 308 181 10 12 295 25 325 2.34e-32 123
Msa0455290 MtrunA17_Chr7g0266651 30.690 290 160 9 18 282 34 307 2.48e-32 123
Msa0455290 MtrunA17_Chr7g0239091 28.254 315 205 8 22 325 139 443 2.57e-32 125
Msa0455290 MtrunA17_Chr5g0423211 27.899 276 170 7 31 285 35 302 5.44e-32 122
Msa0455290 MtrunA17_Chr3g0093751 28.676 272 155 7 43 291 56 311 6.39e-32 122
Msa0455290 MtrunA17_Chr1g0167911 31.818 264 154 6 43 287 54 310 7.89e-32 122
Msa0455290 MtrunA17_Chr8g0354241 28.826 281 169 8 23 282 48 318 5.93e-31 120
Msa0455290 MtrunA17_Chr3g0130391 29.932 294 160 8 44 302 67 349 6.47e-31 120
Msa0455290 MtrunA17_Chr1g0148771 31.716 268 154 7 43 293 63 318 7.37e-31 119
Msa0455290 MtrunA17_Chr1g0194321 29.508 305 166 10 21 294 7 293 3.24e-30 117
Msa0455290 MtrunA17_Chr1g0161041 30.395 329 197 11 18 325 70 387 3.35e-30 118
Msa0455290 MtrunA17_Chr2g0285931 29.927 274 160 9 48 294 25 293 8.91e-30 115
Msa0455290 MtrunA17_Chr3g0125421 31.173 324 171 13 42 322 35 349 9.44e-30 116
Msa0455290 MtrunA17_Chr1g0161111 30.769 286 172 8 18 286 106 382 2.21e-29 116
Msa0455290 MtrunA17_Chr1g0161081 29.221 308 191 9 36 325 66 364 2.78e-29 115
Msa0455290 MtrunA17_Chr6g0488511 29.259 270 162 9 43 293 3 262 5.76e-29 113
Msa0455290 MtrunA17_Chr8g0335411 30.566 265 159 8 43 290 67 323 9.83e-29 114
Msa0455290 MtrunA17_Chr2g0319491 29.057 265 165 5 42 291 32 288 1.67e-28 112
Msa0455290 MtrunA17_Chr7g0247991 32.707 266 152 9 43 290 67 323 3.24e-28 112
Msa0455290 MtrunA17_Chr7g0236011 31.660 259 148 5 43 282 67 315 5.83e-28 111
Msa0455290 MtrunA17_Chr2g0313111 27.778 252 153 8 65 294 42 286 6.42e-28 110
Msa0455290 MtrunA17_Chr5g0420721 29.091 220 142 6 118 325 25 242 1.44e-27 108
Msa0455290 MtrunA17_Chr1g0167931 28.195 266 138 7 43 295 54 279 1.99e-27 109
Msa0455290 MtrunA17_Chr4g0066991 30.739 257 149 7 43 290 67 303 4.09e-27 108
Msa0455290 MtrunA17_Chr8g0358941 27.018 285 159 11 42 294 26 293 1.77e-26 107
Msa0455290 MtrunA17_Chr4g0068891 29.412 289 165 11 31 293 6 281 2.82e-26 106
Msa0455290 MtrunA17_Chr3g0092531 28.727 275 174 6 63 320 28 297 1.30e-25 104
Msa0455290 MtrunA17_Chr4g0045461 27.213 305 192 8 19 295 4 306 4.63e-25 103
Msa0455290 MtrunA17_Chr2g0314371 26.506 249 152 6 39 259 48 293 6.91e-24 100
Msa0455290 MtrunA17_Chr4g0053251 28.333 300 169 11 60 323 33 322 8.53e-24 99.4
Msa0455290 MtrunA17_Chr8g0362741 32.821 195 114 6 73 259 83 268 1.24e-23 98.2
Msa0455290 MtrunA17_Chr7g0247741 26.936 297 188 7 39 312 7 297 2.07e-23 98.6
Msa0455290 MtrunA17_Chr7g0235981 33.918 171 96 4 122 282 106 269 6.81e-23 97.1
Msa0455290 MtrunA17_Chr8g0384481 27.835 291 175 10 40 302 56 339 2.27e-22 96.3
Msa0455290 MtrunA17_Chr3g0126761 33.775 151 87 3 154 293 44 192 3.92e-22 93.2
Msa0455290 MtrunA17_Chr1g0161101 48.913 92 44 2 197 287 404 493 6.01e-22 96.3
Msa0455290 MtrunA17_Chr8g0389941 26.129 310 176 10 48 317 34 330 1.10e-21 94.0
Msa0455290 MtrunA17_Chr5g0407781 25.692 253 163 8 43 282 5 245 1.52e-21 92.8
Msa0455290 MtrunA17_Chr8g0348951 25.333 300 193 8 44 316 6 301 1.99e-21 92.8
Msa0455290 MtrunA17_Chr4g0052251 26.182 275 177 9 50 301 28 299 2.91e-21 92.4
Msa0455290 MtrunA17_Chr8g0336871 38.525 122 68 4 165 282 1 119 8.32e-21 87.8
Msa0455290 MtrunA17_Chr4g0075471 40.000 105 51 3 199 293 29 131 1.26e-20 87.0
Msa0455290 MtrunA17_Chr6g0486831 27.203 261 155 8 65 291 38 297 1.83e-20 90.5
Msa0455290 MtrunA17_Chr1g0170631 33.333 138 82 2 154 282 3 139 2.58e-20 87.4
Msa0455290 MtrunA17_Chr8g0364171 37.719 114 65 3 154 265 18 127 4.76e-20 85.1
Msa0455290 MtrunA17_Chr8g0384461 27.273 275 166 9 43 291 47 313 5.61e-20 89.4
Msa0455290 MtrunA17_Chr5g0394071 30.822 146 90 2 155 291 3 146 7.71e-19 82.8
Msa0455290 MtrunA17_Chr8g0336801 39.362 94 46 2 198 282 10 101 1.82e-18 80.9
Msa0455290 MtrunA17_Chr8g0336831 29.412 187 116 6 43 219 60 240 3.31e-18 82.8
Msa0455290 MtrunA17_Chr5g0407731 23.958 288 194 9 41 315 31 306 4.24e-18 83.6
Msa0455290 MtrunA17_Chr4g0004061 28.409 264 165 7 59 307 27 281 8.15e-18 82.8
Msa0455290 MtrunA17_Chr3g0105281 23.273 275 171 9 40 291 31 288 2.76e-17 81.3
Msa0455290 MtrunA17_Chr1g0158021 27.602 221 135 10 39 247 45 252 3.52e-17 80.1
Msa0455290 MtrunA17_Chr7g0233661 33.607 122 70 2 179 291 1 120 4.34e-17 77.4
Msa0455290 MtrunA17_Chr5g0420881 37.143 105 54 3 199 293 1 103 5.31e-17 77.0
Msa0455290 MtrunA17_Chr4g0055911 25.540 278 168 11 43 291 9 276 1.79e-16 79.0
Msa0455290 MtrunA17_Chr2g0293931 30.636 173 99 7 160 312 13 184 7.91e-16 75.1
Msa0455290 MtrunA17_Chr2g0311611 46.269 67 29 2 199 259 1 66 1.07e-15 70.9
Msa0455290 MtrunA17_Chr4g0064771 30.097 206 103 9 133 323 16 195 1.08e-15 74.7
Msa0455290 MtrunA17_Chr1g0167921 34.545 110 70 1 155 264 50 157 1.35e-15 73.6
Msa0455290 MtrunA17_Chr4g0037611 31.013 158 91 6 171 318 8 157 2.81e-15 73.2
Msa0455290 MtrunA17_Chr4g0055871 25.632 277 164 9 43 291 9 271 7.79e-15 73.9
Msa0455290 MtrunA17_Chr7g0235991 29.801 151 86 4 44 183 22 163 1.60e-13 68.2
Msa0455290 MtrunA17_Chr7g0219991 31.132 106 69 3 155 259 249 351 2.67e-13 69.7
Msa0455290 MtrunA17_Chr7g0219991 30.612 147 88 5 16 154 13 153 1.74e-12 67.4
Msa0455290 MtrunA17_Chr8g0375661 31.897 116 71 4 42 150 51 165 5.73e-13 66.2
Msa0455290 MtrunA17_Chr3g0138351 27.305 282 165 11 39 291 3 273 5.93e-13 68.6
Msa0455290 MtrunA17_Chr8g0375581 36.047 86 52 3 175 259 1 84 1.06e-12 63.2
Msa0455290 MtrunA17_Chr8g0375641 31.897 116 71 4 42 150 51 165 1.84e-12 65.1
Msa0455290 MtrunA17_Chr1g0170641 24.204 157 101 6 5 154 16 161 1.04e-11 62.4
Msa0455290 MtrunA17_Chr4g0009541 22.761 268 187 8 42 291 6 271 3.41e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455290 AT3G51240.1 70.958 334 81 4 4 323 1 332 1.92e-174 488
Msa0455290 AT3G51240.2 72.984 248 53 2 90 323 1 248 3.17e-132 377
Msa0455290 AT4G10490.1 35.061 328 184 8 7 316 12 328 5.47e-61 198
Msa0455290 AT4G10500.1 35.517 290 167 6 19 293 20 304 2.96e-60 196
Msa0455290 AT5G24530.1 35.542 332 183 10 15 325 11 332 8.21e-59 192
Msa0455290 AT4G16330.2 38.462 273 140 8 42 295 66 329 6.60e-58 191
Msa0455290 AT2G38240.1 36.455 299 161 10 18 295 22 312 3.29e-52 176
Msa0455290 AT3G11180.1 35.333 300 166 8 18 295 66 359 4.88e-52 177
Msa0455290 AT5G05600.1 35.235 298 171 7 17 295 36 330 5.69e-52 176
Msa0455290 AT3G11180.2 35.333 300 166 8 18 295 66 359 5.74e-52 176
Msa0455290 AT1G78550.1 31.250 304 189 7 9 295 17 317 3.69e-49 168
Msa0455290 AT3G19010.1 32.781 302 177 6 19 295 4 304 1.70e-48 166
Msa0455290 AT3G19010.4 32.781 302 177 6 19 295 4 304 1.70e-48 166
Msa0455290 AT3G55970.1 34.551 301 172 8 18 295 24 322 2.03e-48 166
Msa0455290 AT4G16330.1 38.839 224 116 6 90 294 1 222 6.61e-47 159
Msa0455290 AT1G55290.1 32.292 288 169 8 39 308 58 337 1.31e-45 159
Msa0455290 AT3G19000.1 31.699 306 180 5 19 295 4 309 3.77e-45 157
Msa0455290 AT5G08640.2 32.770 296 174 6 23 300 23 311 8.85e-45 156
Msa0455290 AT5G08640.1 32.770 296 174 6 23 300 23 311 8.85e-45 156
Msa0455290 AT4G22880.1 34.074 270 156 7 42 291 46 313 4.98e-44 154
Msa0455290 AT4G22880.2 34.074 270 156 7 42 291 46 313 4.98e-44 154
Msa0455290 AT4G22880.3 34.074 270 156 7 42 291 46 313 4.98e-44 154
Msa0455290 AT3G21420.1 31.773 299 180 8 17 294 26 321 1.69e-43 153
Msa0455290 AT2G36690.2 33.942 274 147 12 40 290 58 320 4.01e-43 152
Msa0455290 AT2G36690.1 33.942 274 147 12 40 290 58 320 4.01e-43 152
Msa0455290 AT5G05600.2 35.178 253 151 6 17 259 36 285 7.66e-43 149
Msa0455290 AT3G60290.1 32.374 278 166 8 23 283 31 303 1.61e-42 150
Msa0455290 AT3G13610.1 31.317 281 160 10 36 294 52 321 5.29e-42 149
Msa0455290 AT3G19000.2 31.801 261 158 4 19 259 4 264 5.86e-42 147
Msa0455290 AT1G17020.1 31.212 330 200 9 1 312 17 337 7.01e-42 149
Msa0455290 AT3G19010.2 33.074 257 155 5 19 259 4 259 5.18e-41 145
Msa0455290 AT5G59540.1 32.061 262 153 6 39 282 57 311 5.55e-41 147
Msa0455290 AT1G78550.2 33.475 236 140 5 75 295 6 239 1.16e-40 144
Msa0455290 AT1G06620.1 33.846 260 149 5 39 282 58 310 1.95e-40 145
Msa0455290 AT2G44800.1 31.295 278 169 8 23 283 31 303 2.35e-40 145
Msa0455290 AT3G55970.2 34.375 256 152 7 18 259 24 277 2.72e-40 143
Msa0455290 AT5G63590.1 32.246 276 162 5 37 294 8 276 8.21e-40 142
Msa0455290 AT3G19010.3 30.132 302 155 7 19 295 4 274 9.64e-40 142
Msa0455290 AT4G25300.1 28.939 311 196 8 1 295 16 317 3.12e-39 142
Msa0455290 AT1G05010.1 32.714 269 157 10 41 293 2 262 3.32e-39 141
Msa0455290 AT5G63600.2 31.970 269 157 8 42 294 32 290 3.40e-39 141
Msa0455290 AT1G60980.1 32.588 313 178 10 42 324 56 365 3.42e-39 142
Msa0455290 AT4G25310.1 30.675 326 202 10 17 325 27 345 4.10e-39 141
Msa0455290 AT1G04380.1 33.077 260 148 8 39 282 41 290 4.69e-39 141
Msa0455290 AT1G03410.2 34.241 257 146 5 43 282 57 307 5.31e-39 141
Msa0455290 AT5G63600.1 32.090 268 157 8 42 294 32 289 6.12e-39 140
Msa0455290 AT1G03410.1 34.241 257 146 5 43 282 94 344 1.05e-38 141
Msa0455290 AT5G43440.1 30.769 286 168 8 12 282 40 310 1.18e-38 140
Msa0455290 AT1G15550.1 29.470 302 185 7 39 321 53 345 2.52e-38 139
Msa0455290 AT5G43450.1 33.840 263 141 10 40 282 58 307 2.59e-38 139
Msa0455290 AT4G21690.1 31.884 276 156 7 43 294 47 314 2.75e-38 139
Msa0455290 AT5G59530.1 31.679 262 155 5 39 282 54 309 3.09e-38 139
Msa0455290 AT5G20550.1 30.389 283 167 8 37 294 34 311 8.14e-38 138
Msa0455290 AT5G07200.1 31.013 316 182 9 42 324 57 369 1.52e-37 138
Msa0455290 AT5G59540.2 32.759 232 140 5 39 261 57 281 2.97e-37 135
Msa0455290 AT1G17010.1 30.370 270 169 7 42 295 53 319 3.06e-37 137
Msa0455290 AT1G77330.1 32.384 281 155 10 43 300 3 271 4.09e-37 135
Msa0455290 AT1G49390.1 30.224 268 169 5 42 293 44 309 4.74e-37 136
Msa0455290 AT1G03400.1 33.465 254 139 6 43 280 56 295 5.31e-37 136
Msa0455290 AT5G43440.2 31.274 259 157 7 12 264 40 283 5.54e-37 134
Msa0455290 AT5G63595.1 30.961 281 157 9 25 291 5 262 8.37e-37 133
Msa0455290 AT1G06620.2 34.188 234 140 4 39 265 58 284 1.25e-36 133
Msa0455290 AT3G12900.1 33.708 267 150 9 46 294 59 316 2.09e-36 134
Msa0455290 AT3G61400.1 34.568 243 135 8 58 282 80 316 3.77e-36 134
Msa0455290 AT5G43450.2 34.746 236 130 8 40 264 58 280 4.35e-36 132
Msa0455290 AT1G80330.1 29.358 327 194 9 1 299 1 318 9.72e-36 132
Msa0455290 AT5G20400.1 28.814 295 182 8 42 314 44 332 1.16e-35 132
Msa0455290 AT1G04380.2 33.913 230 135 7 39 261 41 260 3.14e-35 129
Msa0455290 AT1G04350.1 32.046 259 146 8 43 282 58 305 4.29e-35 131
Msa0455290 AT4G25420.1 31.136 273 165 5 42 293 60 330 8.33e-35 130
Msa0455290 AT1G62380.1 29.588 267 169 7 40 293 4 264 1.74e-34 128
Msa0455290 AT5G54000.2 30.677 251 159 5 58 294 62 311 2.71e-34 129
Msa0455290 AT5G07480.1 25.890 309 195 9 1 288 12 307 4.72e-34 128
Msa0455290 AT1G80340.1 30.797 276 160 8 39 294 46 310 1.18e-33 127
Msa0455290 AT1G06650.2 32.584 267 137 8 43 282 64 314 1.59e-33 127
Msa0455290 AT1G03400.2 33.333 225 130 4 43 261 56 266 2.58e-33 126
Msa0455290 AT1G12010.1 27.715 267 174 6 40 293 4 264 3.58e-33 125
Msa0455290 AT2G30840.3 32.584 267 160 11 43 295 57 317 2.12e-32 124
Msa0455290 AT5G51810.1 30.421 309 181 8 43 323 63 365 2.60e-32 124
Msa0455290 AT2G30840.1 31.868 273 160 11 43 295 57 323 4.94e-32 123
Msa0455290 AT3G61400.2 35.238 210 122 6 58 259 80 283 7.74e-32 120
Msa0455290 AT1G49390.2 30.603 232 143 5 78 293 1 230 1.55e-31 119
Msa0455290 AT2G30830.1 30.627 271 161 8 29 282 44 304 1.60e-31 121
Msa0455290 AT2G19590.1 30.627 271 156 8 42 293 10 267 2.63e-31 120
Msa0455290 AT1G06640.1 31.907 257 152 8 43 282 64 314 2.81e-31 121
Msa0455290 AT1G06650.1 31.765 255 141 6 43 280 64 302 3.57e-30 117
Msa0455290 AT1G06645.1 32.342 269 145 10 39 282 68 324 7.15e-30 117
Msa0455290 AT5G12270.1 28.763 299 179 10 18 294 32 318 8.66e-30 117
Msa0455290 AT4G21200.1 28.731 268 161 8 42 291 41 296 1.88e-29 115
Msa0455290 AT5G54000.1 29.870 231 148 4 78 294 1 231 1.89e-29 114
Msa0455290 AT1G44090.1 31.148 305 181 11 42 321 62 362 3.26e-29 115
Msa0455290 AT5G43935.1 27.797 295 167 11 42 316 18 286 4.28e-29 113
Msa0455290 AT5G63580.2 33.953 215 122 5 43 247 19 223 4.41e-29 112
Msa0455290 AT5G63580.1 33.953 215 122 5 43 247 19 223 5.88e-29 112
Msa0455290 AT2G30840.2 32.174 230 142 7 43 264 57 280 6.00e-29 113
Msa0455290 AT1G06640.2 32.328 232 144 6 43 267 64 289 7.99e-29 113
Msa0455290 AT1G78440.1 27.273 275 168 9 65 312 32 301 1.35e-28 113
Msa0455290 AT1G06640.3 33.333 225 135 7 43 259 64 281 2.64e-28 111
Msa0455290 AT2G25450.1 30.078 256 157 6 43 282 55 304 2.85e-28 112
Msa0455290 AT3G50210.4 30.909 275 157 8 52 296 27 298 2.52e-27 109
Msa0455290 AT3G50210.1 30.909 275 157 8 52 296 27 298 2.52e-27 109
Msa0455290 AT3G50210.3 30.909 275 157 8 52 296 27 298 2.52e-27 109
Msa0455290 AT1G30040.1 27.303 304 184 11 13 294 4 292 9.08e-27 108
Msa0455290 AT4G25420.2 28.696 230 150 4 42 259 60 287 8.95e-26 104
Msa0455290 AT1G47990.1 28.846 312 180 10 40 323 12 309 2.97e-25 103
Msa0455290 AT3G49630.1 27.985 268 166 7 60 302 34 299 3.04e-24 101
Msa0455290 AT3G49630.3 27.985 268 166 7 60 302 30 295 3.08e-24 101
Msa0455290 AT4G25310.2 28.086 324 185 11 17 325 27 317 1.87e-23 99.0
Msa0455290 AT2G19590.2 30.252 238 136 7 75 293 26 252 2.01e-23 98.2
Msa0455290 AT2G34555.1 28.315 279 155 11 43 294 27 287 7.42e-23 97.4
Msa0455290 AT5G51810.2 29.694 229 143 6 43 259 63 285 1.74e-22 95.9
Msa0455290 AT1G02400.1 27.778 270 162 10 51 294 27 289 9.28e-22 94.4
Msa0455290 AT1G30040.2 26.923 260 162 10 13 259 4 248 1.77e-20 89.7
Msa0455290 AT5G07480.2 28.977 176 109 5 127 288 25 198 1.98e-20 89.0
Msa0455290 AT3G49620.1 26.996 263 164 8 60 296 59 319 4.31e-20 90.1
Msa0455290 AT4G23340.1 30.041 243 129 10 68 282 30 259 5.42e-20 89.4
Msa0455290 AT3G46490.1 25.253 297 176 7 43 300 12 301 4.70e-19 86.7
Msa0455290 AT1G50960.1 25.180 278 187 7 37 297 34 307 1.64e-18 85.1
Msa0455290 AT4G25300.2 30.519 154 94 4 153 295 72 223 2.37e-18 83.6
Msa0455290 AT3G46500.5 25.263 285 186 8 43 301 12 295 1.21e-17 82.8
Msa0455290 AT1G14130.1 27.170 265 168 9 43 293 9 262 1.96e-17 81.6
Msa0455290 AT3G46490.2 25.267 281 164 7 43 284 12 285 5.55e-17 80.5
Msa0455290 AT1G35190.2 24.476 286 165 8 45 300 9 273 2.80e-16 78.6
Msa0455290 AT1G35190.1 25.086 291 180 9 45 300 9 296 2.59e-15 75.9
Msa0455290 AT1G02400.2 27.064 218 136 8 58 259 34 244 3.28e-15 74.7
Msa0455290 AT3G50210.2 31.737 167 100 3 144 296 50 216 8.76e-15 73.6
Msa0455290 AT3G46500.7 24.535 269 176 8 43 285 12 279 1.18e-14 73.6
Msa0455290 AT1G14120.2 25.191 262 173 7 40 288 5 256 2.84e-14 72.8
Msa0455290 AT1G14120.1 25.191 262 173 7 40 288 5 256 2.84e-14 72.8
Msa0455290 AT1G14120.3 25.191 262 173 7 40 288 5 256 2.84e-14 72.8
Msa0455290 AT1G52820.1 27.273 242 156 7 65 291 36 272 4.85e-14 72.0
Msa0455290 AT5G51310.1 25.000 244 155 7 65 282 22 263 8.11e-13 68.6
Msa0455290 AT4G16770.1 26.160 237 152 6 42 260 21 252 1.18e-12 67.4
Msa0455290 AT4G03070.1 23.322 283 166 10 42 291 13 277 4.19e-12 66.6
Msa0455290 AT2G06960.1 34.959 123 67 4 195 312 26 140 2.48e-11 61.2
Msa0455290 AT4G23340.2 37.113 97 48 3 198 282 46 141 4.82e-11 62.0

Find 103 sgRNAs with CRISPR-Local

Find 2 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAAATTAAATGTAAAAT+AGG 0.110695 3_3:-48008329 None:intergenic
GAATAATCTCTTTCACTAAT+TGG 0.140674 3_3:-48005712 None:intergenic
TTCCATCCTTCTGGCTTATC+TGG 0.171380 3_3:-48005742 None:intergenic
TTTAACATTCACGACGTTAT+TGG 0.190740 3_3:-48007948 None:intergenic
CAGGATCAGTGTGTCGTTTC+AGG 0.214812 3_3:-48005942 None:intergenic
AGGTCAGGTTGAGGGCATTT+TGG 0.233663 3_3:-48005910 None:intergenic
CTTGAGCAAAAGTGAATGTT+AGG 0.279746 3_3:+48007808 Msa0455290:exon
TTGCATCTGTTGCTGGATAT+TGG 0.281140 3_3:-48007690 None:intergenic
GTTACCTCTTTCCATCCTTC+TGG 0.281740 3_3:-48005751 None:intergenic
AACTGATTGTAAGCACCTTT+TGG 0.286081 3_3:-48003726 None:intergenic
TGACATGTCTGGTGGTAAAA+AGG 0.287392 3_3:+48003959 Msa0455290:CDS
TTGCAAAAGCTTGCGAGAAC+TGG 0.289000 3_3:+48003829 Msa0455290:CDS
TTAAAATTAAATGTAAAATA+GGG 0.315789 3_3:-48008328 None:intergenic
GTTGTATGCTAAGATAGTTT+TGG 0.316989 3_3:+48008036 Msa0455290:three_prime_UTR
GACAAAAGCATGTGTTGATA+TGG 0.321789 3_3:+48005861 Msa0455290:CDS
AATAATCTCTTTCACTAATT+GGG 0.336585 3_3:-48005711 None:intergenic
CGTGAATGTTAAACAATTGA+TGG 0.337419 3_3:+48007958 Msa0455290:three_prime_UTR
TATCAAATAATTTATAGATA+TGG 0.337926 3_3:+48007897 Msa0455290:three_prime_UTR
AAGAATCTCATTCAAAGGTT+TGG 0.356999 3_3:-48007856 None:intergenic
GCCACCAACGTCGTCGATTC+CGG 0.358520 3_3:-48003781 None:intergenic
ATCCATGAGAAGAACTTAAT+AGG 0.364724 3_3:-48007983 None:intergenic
AAATAGTATTCGACCTTGAA+TGG 0.393829 3_3:+48008248 Msa0455290:three_prime_UTR
TACACAATTGCATCTGTTGC+TGG 0.396791 3_3:-48007697 None:intergenic
CCCTTTCCATCCATTACAAA+TGG 0.408284 3_3:-48008169 None:intergenic
AATACTATTTCAGTTTGGTT+TGG 0.412480 3_3:-48008235 None:intergenic
GGTCGAATACTATTTCAGTT+TGG 0.413787 3_3:-48008240 None:intergenic
GTATTCGACCTTGAATGGTT+TGG 0.414714 3_3:+48008253 Msa0455290:three_prime_UTR
CTGAAACGACACACTGATCC+TGG 0.418531 3_3:+48005943 Msa0455290:CDS
TCTCCCTCTCTGACCTTCAA+AGG 0.423280 3_3:-48007721 None:intergenic
TAGATTGATTTAGATTGATT+CGG 0.424114 3_3:-48008288 None:intergenic
ATTCCGGCGAGAGAAATAAT+TGG 0.427584 3_3:-48003765 None:intergenic
CACTCGAGTCTAGTTTCATC+AGG 0.427976 3_3:+48003688 Msa0455290:CDS
TGCAATTGTGTACCCTTTGA+AGG 0.428183 3_3:+48007708 Msa0455290:CDS
AGGGAGAAGAGATGAATGAT+TGG 0.431582 3_3:+48005662 Msa0455290:intron
CCTCATCTCTAGTAACTTGA+AGG 0.438822 3_3:-48006002 None:intergenic
CCATTTGTAATGGATGGAAA+GGG 0.439511 3_3:+48008169 Msa0455290:three_prime_UTR
TAGCATACAACGAGAGTTTG+AGG 0.443805 3_3:-48008024 None:intergenic
TGCCATCAGAAGAGAAGCTT+CGG 0.444347 3_3:+48003934 Msa0455290:CDS
GAGGTGTTATCTGAGGCTAT+GGG 0.447873 3_3:+48005820 Msa0455290:CDS
AAGCTTCGGTTTGACATGTC+TGG 0.449959 3_3:+48003948 Msa0455290:CDS
TGAGGTGTTATCTGAGGCTA+TGG 0.451886 3_3:+48005819 Msa0455290:CDS
ATCTTCCAAGTTGTTGATCA+TGG 0.452418 3_3:+48003855 Msa0455290:CDS
GCATTTCCATTTGTAATGGA+TGG 0.456897 3_3:+48008163 Msa0455290:three_prime_UTR
TGCAAAAGCTTGCGAGAACT+GGG 0.464107 3_3:+48003830 Msa0455290:CDS
GGAATGTTGCTACGGATAAA+CGG 0.470067 3_3:-48007669 None:intergenic
CCTCAACCTGACCTTACTCT+TGG 0.478704 3_3:+48005919 Msa0455290:CDS
ACAACAAAAGCACCTTCAAC+TGG 0.481290 3_3:-48006048 None:intergenic
CTCCCTCTCTGACCTTCAAA+GGG 0.483986 3_3:-48007720 None:intergenic
TCCATTTGTAATGGATGGAA+AGG 0.489235 3_3:+48008168 Msa0455290:three_prime_UTR
CAAGAGTAAGGTCAGGTTGA+GGG 0.498972 3_3:-48005918 None:intergenic
CCACGCCATGATCAACAACT+TGG 0.500880 3_3:-48003860 None:intergenic
CAATCTAAATCAATCTAGCT+TGG 0.500902 3_3:+48008294 Msa0455290:three_prime_UTR
GACGAAAGCACTCGTCCAAA+AGG 0.503109 3_3:+48003711 Msa0455290:CDS
TTTAACATGCAAGTTGTTTG+AGG 0.504827 3_3:+48005801 Msa0455290:CDS
TTAGTGAAAGAGATTATTCA+AGG 0.506390 3_3:+48005716 Msa0455290:CDS
GGGAGAGAAATATGTGATGG+AGG 0.506607 3_3:+48007738 Msa0455290:CDS
ATCCTATTAAGTTCTTCTCA+TGG 0.511522 3_3:+48007981 Msa0455290:three_prime_UTR
GTCGTTTCAGGCCAAGAGTA+AGG 0.513030 3_3:-48005930 None:intergenic
TGGATGGAAAGGGGTGTAAG+TGG 0.519581 3_3:+48008179 Msa0455290:three_prime_UTR
GGTTCAAAAGAGCTGATCAC+AGG 0.523724 3_3:+48007623 Msa0455290:CDS
ATCACTGTTCCACCAGTTGA+AGG 0.533931 3_3:+48006036 Msa0455290:CDS
GGAAAGGGGTGTAAGTGGTT+CGG 0.534881 3_3:+48008184 Msa0455290:three_prime_UTR
AACACCAGAGTGATTGTGCC+AGG 0.538136 3_3:-48005961 None:intergenic
ATTCCAATTATTTCTCTCGC+CGG 0.539730 3_3:+48003762 Msa0455290:CDS
AGAGGGAGAGAAATATGTGA+TGG 0.544187 3_3:+48007735 Msa0455290:CDS
GCCGGAATCGACGACGTTGG+TGG 0.544216 3_3:+48003780 Msa0455290:CDS
TTCAGGCCAAGAGTAAGGTC+AGG 0.545172 3_3:-48005925 None:intergenic
AACCGAAGCTTCTCTTCTGA+TGG 0.548453 3_3:-48003936 None:intergenic
CCAAGAGTAAGGTCAGGTTG+AGG 0.550579 3_3:-48005919 None:intergenic
TAATCAAGAATCTCATTCAA+AGG 0.553373 3_3:-48007861 None:intergenic
TGCATGCAGTATTTAAGTAA+TGG 0.564893 3_3:+48007598 Msa0455290:intron
TAAGCCAGAAGGATGGAAAG+AGG 0.574399 3_3:+48005747 Msa0455290:CDS
GGTCGCAAATCTCTTCTCTA+CGG 0.575121 3_3:-48003803 None:intergenic
CTTCAAGTTACTAGAGATGA+GGG 0.575286 3_3:+48006003 Msa0455290:CDS
TGATATGGTTCAAAAGATTG+TGG 0.575423 3_3:+48005876 Msa0455290:CDS
TGCAGTATTTAAGTAATGGA+CGG 0.578042 3_3:+48007602 Msa0455290:intron
GTTGTTTGAGGTGTTATCTG+AGG 0.584471 3_3:+48005813 Msa0455290:CDS
TGATCCTGGCACAATCACTC+TGG 0.585677 3_3:+48005957 Msa0455290:CDS
TTGAGCAAAAGTGAATGTTA+GGG 0.589568 3_3:+48007809 Msa0455290:exon
CCAAGTTGTTGATCATGGCG+TGG 0.589940 3_3:+48003860 Msa0455290:CDS
GAATGTTAGGGACCTGCAGA+AGG 0.592178 3_3:+48007821 Msa0455290:exon
CCTTCAAGTTACTAGAGATG+AGG 0.598782 3_3:+48006002 Msa0455290:CDS
AGGTGTTATCTGAGGCTATG+GGG 0.601581 3_3:+48005821 Msa0455290:CDS
GGCCAGATAAGCCAGAAGGA+TGG 0.602319 3_3:+48005740 Msa0455290:CDS
AAGAGCTGATCACAGGGCAG+TGG 0.603019 3_3:+48007630 Msa0455290:CDS
TCTGGTGTTTCAAGAACAAG+TGG 0.603815 3_3:+48005975 Msa0455290:CDS
CATTTGTAATGGATGGAAAG+GGG 0.604149 3_3:+48008170 Msa0455290:three_prime_UTR
TACCCTTTGAAGGTCAGAGA+GGG 0.609840 3_3:+48007718 Msa0455290:CDS
TGGATATTGGAATGTTGCTA+CGG 0.610921 3_3:-48007677 None:intergenic
CTAGAGATGAGGGTGAGACG+TGG 0.616545 3_3:+48006013 Msa0455290:CDS
ACAAAAGCACCTTCAACTGG+TGG 0.617322 3_3:-48006045 None:intergenic
GTTCAAAAGAGCTGATCACA+GGG 0.630306 3_3:+48007624 Msa0455290:CDS
CTTCGGTTTGACATGTCTGG+TGG 0.633367 3_3:+48003951 Msa0455290:CDS
TGTATATTTCAGCAAAAGTG+AGG 0.638977 3_3:-48007765 None:intergenic
AGGTGGCCAGATAAGCCAGA+AGG 0.663810 3_3:+48005736 Msa0455290:CDS
CTCGCCGGAATCGACGACGT+TGG 0.668038 3_3:+48003777 Msa0455290:CDS
ACTCGAGTCTAGTTTCATCA+GGG 0.678203 3_3:+48003689 Msa0455290:CDS
GTGTTTCAAGAACAAGTGGG+TGG 0.685189 3_3:+48005979 Msa0455290:CDS
GTGAAAGAGATTATTCAAGG+TGG 0.692405 3_3:+48005719 Msa0455290:CDS
AGCATTATACAAAAGCCAAG+AGG 0.697704 3_3:+48003575 Msa0455290:five_prime_UTR
GCAAAAGCTTGCGAGAACTG+GGG 0.707380 3_3:+48003831 Msa0455290:CDS
GTACCCTTTGAAGGTCAGAG+AGG 0.744630 3_3:+48007717 Msa0455290:CDS
CTGGTGTTTCAAGAACAAGT+GGG 0.745352 3_3:+48005976 Msa0455290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTGGCTTTTGTATAATGCT+CGG - chr3_3:48003575-48003594 None:intergenic 35.0%
AGCATTATACAAAAGCCAAG+AGG + chr3_3:48003575-48003594 Msa0455290:five_prime_UTR 35.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 48003554 48008380 48003554 ID=Msa0455290;Name=Msa0455290
chr3_3 mRNA 48003554 48008380 48003554 ID=Msa0455290-mRNA-1;Parent=Msa0455290;Name=Msa0455290-mRNA-1;_AED=0.28;_eAED=0.28;_QI=82|0.5|0.66|1|1|1|3|558|325
chr3_3 exon 48003554 48003995 48003554 ID=Msa0455290-mRNA-1:exon:8897;Parent=Msa0455290-mRNA-1
chr3_3 exon 48005664 48006065 48005664 ID=Msa0455290-mRNA-1:exon:8898;Parent=Msa0455290-mRNA-1
chr3_3 exon 48007607 48008380 48007607 ID=Msa0455290-mRNA-1:exon:8899;Parent=Msa0455290-mRNA-1
chr3_3 five_prime_UTR 48003554 48003635 48003554 ID=Msa0455290-mRNA-1:five_prime_utr;Parent=Msa0455290-mRNA-1
chr3_3 CDS 48003636 48003995 48003636 ID=Msa0455290-mRNA-1:cds;Parent=Msa0455290-mRNA-1
chr3_3 CDS 48005664 48006065 48005664 ID=Msa0455290-mRNA-1:cds;Parent=Msa0455290-mRNA-1
chr3_3 CDS 48007607 48007822 48007607 ID=Msa0455290-mRNA-1:cds;Parent=Msa0455290-mRNA-1
chr3_3 three_prime_UTR 48007823 48008380 48007823 ID=Msa0455290-mRNA-1:three_prime_utr;Parent=Msa0455290-mRNA-1
Gene Sequence

>Msa0455290

ATGCAAACAATGGCACCAGCGAAAACTCTCGATTATATACCTCAGAAAAACACACTCGAGTCTAGTTTCATCAGGGACGAAAGCACTCGTCCAAAAGGTGCTTACAATCAGTTCAGCAATGATGAGATTCCAATTATTTCTCTCGCCGGAATCGACGACGTTGGTGGCCGTAGAGAAGAGATTTGCGACCAGATTGCAAAAGCTTGCGAGAACTGGGGTATCTTCCAAGTTGTTGATCATGGCGTGGATCAAAAGCTCATTTCTGAGATGACCAGTTTTTCTAAAGAGTTCTTTGATTTGCCATCAGAAGAGAAGCTTCGGTTTGACATGTCTGGTGGTAAAAAGGGTGGCTTCGTAGTAGGAGAAGAGATGAATGATTGGAGAGAGCGAATGCTATACTTTTCATACCCAATTAGTGAAAGAGATTATTCAAGGTGGCCAGATAAGCCAGAAGGATGGAAAGAGGTAACAGAAGAATACAGTGAGAAGCTAATGAGTTTAACATGCAAGTTGTTTGAGGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTTTGACAAAAGCATGTGTTGATATGGTTCAAAAGATTGTGGTAAATTACTACCCAAAATGCCCTCAACCTGACCTTACTCTTGGCCTGAAACGACACACTGATCCTGGCACAATCACTCTGGTGTTTCAAGAACAAGTGGGTGGCCTTCAAGTTACTAGAGATGAGGGTGAGACGTGGATCACTGTTCCACCAGTTGAAGGTGCTTTTTATTTAAGTAATGGACGGTTCAAAAGAGCTGATCACAGGGCAGTGGTGAATTCAAGCTACAGCCGTTTATCCGTAGCAACATTCCAATATCCAGCAACAGATGCAATTGTGTACCCTTTGAAGGTCAGAGAGGGAGAGAAATATGTGATGGAGGAACACCTCACTTTTGCTGAAATATACAGGAGGAACATGAGCAATTACCTTGAGCAAAAGTGA
Protein sequence

>Msa0455290

MQTMAPAKTLDYIPQKNTLESSFIRDESTRPKGAYNQFSNDEIPIISLAGIDDVGGRREEICDQIAKACENWGIFQVVDHGVDQKLISEMTSFSKEFFDLPSEEKLRFDMSGGKKGGFVVGEEMNDWRERMLYFSYPISERDYSRWPDKPEGWKEVTEEYSEKLMSLTCKLFEVLSEAMGLEKEALTKACVDMVQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLVFQEQVGGLQVTRDEGETWITVPPVEGAFYLSNGRFKRADHRAVVNSSYSRLSVATFQYPATDAIVYPLKVREGEKYVMEEHLTFAEIYRRNMSNYLEQK*