AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0465950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465950 MtrunA17_Chr3g0118671 75.941 478 61 2 1 424 1 478 0.0 749
Msa0465950 MtrunA17_Chr3g0118711 74.370 476 68 2 3 424 10 485 0.0 730
Msa0465950 MtrunA17_Chr3g0118771 74.843 477 66 2 3 425 18 494 0.0 729
Msa0465950 MtrunA17_Chr3g0118691 72.443 479 78 2 1 425 10 488 0.0 720
Msa0465950 MtrunA17_Chr3g0118701 72.443 479 78 2 1 425 10 488 0.0 720
Msa0465950 MtrunA17_Chr3g0118751 69.102 479 65 4 1 425 1 450 0.0 652
Msa0465950 MtrunA17_Chr3g0118661 58.281 477 144 3 3 425 10 485 0.0 534
Msa0465950 MtrunA17_Chr3g0118721 83.390 295 49 0 131 425 1 295 0.0 530
Msa0465950 MtrunA17_Chr5g0426431 49.045 471 180 7 6 420 12 478 3.18e-157 452
Msa0465950 MtrunA17_Chr3g0092641 48.093 472 185 7 5 420 11 478 4.57e-155 447
Msa0465950 MtrunA17_Chr3g0078841 45.895 475 199 4 2 420 6 478 2.54e-152 440
Msa0465950 MtrunA17_Chr6g0454331 46.667 480 192 5 2 420 3 479 3.91e-151 437
Msa0465950 MtrunA17_Chr6g0454341 45.684 475 200 4 2 420 6 478 1.15e-150 436
Msa0465950 MtrunA17_Chr8g0336331 46.105 475 197 5 2 420 6 477 2.74e-148 430
Msa0465950 MtrunA17_Chr6g0454401 45.511 479 198 5 2 420 6 481 1.78e-147 428
Msa0465950 MtrunA17_Chr6g0453951 46.444 478 194 6 2 420 53 527 4.10e-147 429
Msa0465950 MtrunA17_Chr6g0454301 46.105 475 198 4 2 420 259 731 1.31e-146 434
Msa0465950 MtrunA17_Chr6g0454301 55.022 229 100 3 190 418 3 228 9.09e-85 274
Msa0465950 MtrunA17_Chr6g0454321 44.813 482 202 5 2 421 6 485 7.46e-146 429
Msa0465950 MtrunA17_Chr6g0454321 48.780 123 55 2 3 117 501 623 1.16e-28 118
Msa0465950 MtrunA17_Chr5g0423981 47.297 444 201 6 4 420 8 445 2.51e-145 421
Msa0465950 MtrunA17_Chr6g0454191 45.188 478 199 6 3 420 7 481 1.79e-144 420
Msa0465950 MtrunA17_Chr6g0454201 46.429 476 193 5 4 420 9 481 8.84e-144 418
Msa0465950 MtrunA17_Chr6g0454361 46.849 476 191 6 4 420 9 481 4.48e-142 414
Msa0465950 MtrunA17_Chr2g0278711 43.789 475 205 6 3 420 8 477 1.07e-140 410
Msa0465950 MtrunA17_Chr7g0217881 45.887 462 204 6 1 420 5 462 1.08e-140 410
Msa0465950 MtrunA17_Chr6g0454181 43.606 477 207 5 3 420 7 480 1.18e-140 410
Msa0465950 MtrunA17_Chr6g0454211 46.025 478 196 5 2 420 293 767 2.19e-140 419
Msa0465950 MtrunA17_Chr6g0454211 34.828 290 104 4 130 419 63 267 4.06e-45 167
Msa0465950 MtrunA17_Chr6g0454291 45.188 478 200 5 2 420 3 477 7.69e-140 408
Msa0465950 MtrunA17_Chr6g0453961 44.654 477 201 7 4 420 17 490 8.00e-140 409
Msa0465950 MtrunA17_Chr8g0359821 43.908 476 207 5 2 420 6 478 2.14e-138 405
Msa0465950 MtrunA17_Chr4g0050341 44.000 475 206 6 4 419 17 490 2.00e-137 402
Msa0465950 MtrunA17_Chr6g0454351 43.305 478 192 7 2 420 8 465 3.52e-135 396
Msa0465950 MtrunA17_Chr6g0454151 44.699 481 202 6 2 423 6 481 1.10e-134 395
Msa0465950 MtrunA17_Chr6g0454261 43.096 478 210 6 2 420 6 480 1.11e-133 393
Msa0465950 MtrunA17_Chr6g0452771 42.558 477 212 5 3 420 7 480 9.82e-129 380
Msa0465950 MtrunA17_Chr6g0454141 41.423 478 218 5 2 420 6 480 1.12e-127 377
Msa0465950 MtrunA17_Chr6g0454121 42.105 475 214 5 4 420 8 479 3.16e-126 374
Msa0465950 MtrunA17_Chr6g0454131 41.895 475 215 5 4 420 8 479 1.47e-125 372
Msa0465950 MtrunA17_Chr6g0454251 41.667 396 169 5 2 338 3 395 1.06e-108 326
Msa0465950 MtrunA17_Chr5g0426401 52.041 294 134 5 130 420 22 311 2.71e-105 314
Msa0465950 MtrunA17_Chr6g0454271 51.034 290 139 2 131 420 1 287 4.48e-103 308
Msa0465950 MtrunA17_Chr6g0454221 54.506 233 104 2 190 422 3 233 3.53e-89 273
Msa0465950 MtrunA17_Chr6g0454171 42.593 324 159 7 103 420 8 310 1.03e-82 256
Msa0465950 MtrunA17_Chr8g0355011 44.674 291 116 3 130 420 117 362 3.04e-80 252
Msa0465950 MtrunA17_Chr5g0412131 33.404 473 243 12 5 419 11 469 1.08e-77 248
Msa0465950 MtrunA17_Chr3g0112761 34.641 459 240 12 6 420 8 450 1.07e-76 245
Msa0465950 MtrunA17_Chr3g0112771 33.115 459 243 10 7 420 13 452 8.80e-76 243
Msa0465950 MtrunA17_Chr5g0412111 33.333 474 245 12 3 419 2 461 3.70e-75 242
Msa0465950 MtrunA17_Chr5g0412101 32.770 473 247 11 5 419 11 470 2.38e-73 237
Msa0465950 MtrunA17_Chr7g0249981 29.274 468 267 10 4 425 23 472 4.36e-69 226
Msa0465950 MtrunA17_Chr5g0414331 31.250 464 254 10 6 423 13 457 5.52e-68 223
Msa0465950 MtrunA17_Chr5g0414321 31.130 469 248 11 6 423 11 455 6.70e-67 220
Msa0465950 MtrunA17_Chr7g0250001 29.574 470 261 11 1 421 1 449 1.54e-66 219
Msa0465950 MtrunA17_Chr1g0207931 30.211 427 264 8 6 419 92 497 5.11e-66 219
Msa0465950 MtrunA17_Chr6g0454371 56.395 172 74 1 249 420 1 171 2.88e-65 206
Msa0465950 MtrunA17_Chr4g0032331 30.538 465 257 9 7 424 9 454 1.63e-64 214
Msa0465950 MtrunA17_Chr6g0464921 29.462 465 259 10 5 419 10 455 1.92e-62 208
Msa0465950 MtrunA17_Chr6g0454231 42.969 256 104 4 166 420 5 219 1.10e-60 204
Msa0465950 MtrunA17_Chr6g0454231 37.931 232 88 2 2 177 246 477 5.27e-42 154
Msa0465950 MtrunA17_Chr3g0098111 27.158 475 283 9 6 425 9 475 1.11e-60 204
Msa0465950 MtrunA17_Chr7g0218841 31.533 463 236 16 5 416 5 437 1.89e-60 202
Msa0465950 MtrunA17_Chr7g0218831 30.435 460 244 12 5 416 5 436 2.33e-60 202
Msa0465950 MtrunA17_Chr6g0464881 28.450 471 263 12 2 420 7 455 5.01e-60 202
Msa0465950 MtrunA17_Chr7g0218811 29.630 459 250 10 5 416 14 446 3.98e-59 199
Msa0465950 MtrunA17_Chr7g0218821 29.487 468 250 13 5 416 4 447 1.01e-57 196
Msa0465950 MtrunA17_Chr8g0365811 28.571 476 263 14 7 419 496 957 1.03e-57 204
Msa0465950 MtrunA17_Chr8g0365811 28.540 452 250 14 6 394 9 450 1.58e-51 186
Msa0465950 MtrunA17_Chr7g0218791 30.407 467 236 15 5 412 4 440 4.53e-57 194
Msa0465950 MtrunA17_Chr6g0464841 29.806 463 251 12 6 416 11 451 1.75e-56 192
Msa0465950 MtrunA17_Chr1g0161351 28.936 470 269 14 6 419 37 497 2.81e-56 193
Msa0465950 MtrunA17_Chr8g0336261 57.971 138 57 1 249 386 1 137 3.12e-56 182
Msa0465950 MtrunA17_Chr6g0464871 29.122 467 261 12 6 422 23 469 5.14e-56 192
Msa0465950 MtrunA17_Chr1g0207971 27.426 474 262 12 6 422 8 456 5.26e-56 191
Msa0465950 MtrunA17_Chr1g0207861 28.178 472 270 12 6 419 8 468 7.38e-56 191
Msa0465950 MtrunA17_Chr8g0377921 28.270 474 271 12 5 420 2 464 1.14e-55 191
Msa0465950 MtrunA17_Chr8g0380531 27.292 469 265 12 6 419 10 457 1.63e-55 190
Msa0465950 MtrunA17_Chr1g0207951 27.824 478 256 12 6 422 124 573 1.91e-55 197
Msa0465950 MtrunA17_Chr1g0207951 26.216 473 282 8 6 425 656 1114 2.11e-51 186
Msa0465950 MtrunA17_Chr6g0453941 39.427 279 146 6 2 279 7 263 8.73e-55 183
Msa0465950 MtrunA17_Chr4g0053321 29.140 477 270 18 2 423 20 483 1.18e-54 189
Msa0465950 MtrunA17_Chr6g0464861 29.336 467 255 12 2 416 7 450 2.16e-54 187
Msa0465950 MtrunA17_Chr5g0401721 26.891 476 280 14 7 423 9 475 3.29e-54 187
Msa0465950 MtrunA17_Chr4g0044511 28.958 480 264 15 2 417 36 502 4.64e-53 185
Msa0465950 MtrunA17_Chr1g0207831 28.571 476 268 14 7 425 9 469 4.95e-53 184
Msa0465950 MtrunA17_Chr1g0207981 31.544 298 189 6 130 420 184 473 3.11e-52 182
Msa0465950 MtrunA17_Chr4g0053501 28.481 474 267 15 6 423 11 468 5.44e-52 182
Msa0465950 MtrunA17_Chr8g0377941 28.392 479 258 13 7 422 8 464 1.38e-51 180
Msa0465950 MtrunA17_Chr7g0249931 28.266 467 263 15 6 421 40 485 5.46e-50 176
Msa0465950 MtrunA17_Chr3g0122001 27.310 487 271 12 1 419 481 952 6.63e-50 181
Msa0465950 MtrunA17_Chr3g0122001 27.027 481 281 9 1 419 1 473 9.92e-50 181
Msa0465950 MtrunA17_Chr6g0449931 30.832 493 241 18 1 419 1 467 1.63e-49 174
Msa0465950 MtrunA17_Chr5g0393591 27.155 464 243 8 6 419 17 435 1.20e-48 172
Msa0465950 MtrunA17_Chr3g0121991 26.722 479 284 10 1 419 74 545 2.70e-48 172
Msa0465950 MtrunA17_Chr8g0336741 30.833 480 243 17 6 418 13 470 2.85e-48 171
Msa0465950 MtrunA17_Chr5g0419761 30.242 496 255 16 6 424 9 490 3.43e-48 171
Msa0465950 MtrunA17_Chr7g0265141 28.717 491 261 14 6 420 9 486 8.85e-48 170
Msa0465950 MtrunA17_Chr7g0265041 27.935 494 272 14 5 424 10 493 1.29e-47 170
Msa0465950 MtrunA17_Chr8g0336691 36.296 270 140 6 169 418 1121 1378 1.53e-47 175
Msa0465950 MtrunA17_Chr8g0336691 26.844 488 264 13 1 418 8 472 5.75e-43 161
Msa0465950 MtrunA17_Chr8g0336691 35.271 258 131 7 169 418 682 911 2.39e-42 159
Msa0465950 MtrunA17_Chr7g0275681 28.074 488 266 14 5 422 11 483 3.40e-47 168
Msa0465950 MtrunA17_Chr7g0232401 26.539 471 268 13 1 408 1 456 7.82e-47 167
Msa0465950 MtrunA17_Chr7g0232411 27.066 484 261 15 1 415 1 461 1.29e-46 167
Msa0465950 MtrunA17_Chr1g0153451 28.862 492 259 17 1 423 1 470 3.40e-46 166
Msa0465950 MtrunA17_Chr6g0486251 28.659 492 248 17 1 418 1 463 1.24e-45 164
Msa0465950 MtrunA17_Chr6g0486201 28.659 492 248 17 1 418 1 463 1.24e-45 164
Msa0465950 MtrunA17_Chr8g0336651 35.662 272 141 6 169 418 983 1242 1.96e-45 169
Msa0465950 MtrunA17_Chr8g0336651 35.821 268 142 6 169 418 208 463 2.42e-43 162
Msa0465950 MtrunA17_Chr8g0336651 32.558 258 134 5 169 418 548 773 1.91e-35 139
Msa0465950 MtrunA17_Chr7g0232391 27.160 486 258 14 1 415 1 461 2.47e-45 163
Msa0465950 MtrunA17_Chr8g0336271 37.917 240 92 3 2 185 6 244 4.60e-45 157
Msa0465950 MtrunA17_Chr5g0419771 27.273 495 265 14 6 421 36 514 6.55e-45 163
Msa0465950 MtrunA17_Chr8g0334851 27.105 487 267 17 1 418 1 468 9.96e-45 162
Msa0465950 MtrunA17_Chr8g0336731 37.313 268 138 7 169 418 234 489 1.01e-44 162
Msa0465950 MtrunA17_Chr8g0335141 29.046 482 262 19 1 419 4 468 1.50e-44 161
Msa0465950 MtrunA17_Chr7g0249961 34.034 238 142 5 190 421 33 261 2.19e-44 155
Msa0465950 MtrunA17_Chr5g0440421 26.908 498 278 17 2 421 6 495 2.57e-44 161
Msa0465950 MtrunA17_Chr6g0453981 44.186 172 93 2 130 301 63 231 5.01e-44 153
Msa0465950 MtrunA17_Chr7g0232331 26.680 491 263 17 1 419 1 466 1.35e-43 158
Msa0465950 MtrunA17_Chr1g0179901 28.074 488 271 21 6 421 16 495 1.47e-43 159
Msa0465950 MtrunA17_Chr8g0373301 32.131 305 172 8 130 415 174 462 2.19e-43 158
Msa0465950 MtrunA17_Chr6g0462571 32.890 301 168 7 130 415 176 457 2.32e-43 158
Msa0465950 MtrunA17_Chr8g0366391 27.347 490 274 14 6 425 9 486 2.62e-43 158
Msa0465950 MtrunA17_Chr7g0243851 29.847 459 254 17 4 419 9 442 3.98e-43 157
Msa0465950 MtrunA17_Chr5g0448521 28.660 485 265 18 3 422 2 470 9.07e-43 156
Msa0465950 MtrunA17_Chr8g0335161 27.778 486 270 17 1 423 1 468 1.39e-42 155
Msa0465950 MtrunA17_Chr5g0426411 54.015 137 59 2 2 134 8 144 1.46e-42 147
Msa0465950 MtrunA17_Chr7g0265051 29.184 490 273 17 2 423 5 488 1.94e-42 156
Msa0465950 MtrunA17_Chr5g0428081 26.427 473 279 13 9 419 14 479 2.20e-42 155
Msa0465950 MtrunA17_Chr7g0243931 26.939 490 274 13 2 419 13 490 3.14e-42 155
Msa0465950 MtrunA17_Chr1g0173121 25.107 466 278 13 7 419 15 462 4.12e-42 154
Msa0465950 MtrunA17_Chr7g0243951 27.629 485 272 15 4 419 9 483 5.18e-42 154
Msa0465950 MtrunA17_Chr1g0159551 26.889 450 257 15 11 408 19 448 5.21e-42 154
Msa0465950 MtrunA17_Chr6g0459311 25.678 479 279 12 1 418 8 470 6.42e-42 154
Msa0465950 MtrunA17_Chr7g0265101 28.398 493 275 18 2 423 5 490 9.71e-42 154
Msa0465950 MtrunA17_Chr7g0275511 28.125 480 260 16 5 418 14 474 1.23e-41 153
Msa0465950 MtrunA17_Chr7g0265151 27.160 486 281 17 6 424 9 488 1.40e-41 153
Msa0465950 MtrunA17_Chr4g0066221 27.254 488 267 13 1 416 6 477 1.45e-41 153
Msa0465950 MtrunA17_Chr6g0462551 32.673 303 175 7 127 415 173 460 1.65e-41 153
Msa0465950 MtrunA17_Chr4g0014061 28.834 489 251 19 2 416 4 469 1.77e-41 153
Msa0465950 MtrunA17_Chr6g0462541 34.074 270 148 6 160 415 206 459 2.15e-41 152
Msa0465950 MtrunA17_Chr8g0361371 27.479 484 267 19 2 418 3 469 3.77e-41 152
Msa0465950 MtrunA17_Chr4g0011051 29.757 494 264 19 1 420 4 488 3.95e-41 152
Msa0465950 MtrunA17_Chr7g0232341 26.737 475 246 17 1 401 1 447 4.24e-41 152
Msa0465950 MtrunA17_Chr7g0243771 27.950 483 276 13 1 419 1 475 4.71e-41 152
Msa0465950 MtrunA17_Chr7g0232311 27.731 476 268 15 1 416 1 460 4.91e-41 151
Msa0465950 MtrunA17_Chr5g0431441 27.273 473 264 14 6 421 18 467 7.14e-41 151
Msa0465950 MtrunA17_Chr5g0431361 26.695 472 258 15 6 419 12 453 8.32e-41 150
Msa0465950 MtrunA17_Chr5g0448551 27.209 430 253 12 3 387 4 418 9.06e-41 150
Msa0465950 MtrunA17_Chr5g0442581 27.183 504 263 16 3 425 2 482 1.02e-40 152
Msa0465950 MtrunA17_Chr8g0347281 34.114 299 165 9 137 418 188 471 1.22e-40 150
Msa0465950 MtrunA17_Chr4g0060511 27.721 487 269 15 6 419 11 487 1.34e-40 151
Msa0465950 MtrunA17_Chr4g0072771 24.255 470 277 10 3 419 22 465 1.65e-40 150
Msa0465950 MtrunA17_Chr7g0243801 28.274 481 273 13 3 419 4 476 2.78e-40 150
Msa0465950 MtrunA17_Chr8g0347271 27.992 493 238 17 5 418 18 472 3.01e-40 149
Msa0465950 MtrunA17_Chr7g0235051 27.974 454 274 15 6 418 11 452 4.04e-40 149
Msa0465950 MtrunA17_Chr2g0294931 26.789 489 275 16 1 419 6 481 4.85e-40 149
Msa0465950 MtrunA17_Chr4g0066201 27.197 478 277 13 1 421 13 476 6.84e-40 149
Msa0465950 MtrunA17_Chr5g0442561 27.642 492 266 19 3 422 2 475 8.45e-40 148
Msa0465950 MtrunA17_Chr5g0442511 27.122 483 257 16 3 422 46 496 9.52e-40 148
Msa0465950 MtrunA17_Chr4g0066261 25.690 471 281 12 9 416 14 478 1.58e-39 148
Msa0465950 MtrunA17_Chr3g0079731 32.624 282 149 7 165 417 209 478 1.60e-39 147
Msa0465950 MtrunA17_Chr7g0265111 26.915 483 280 14 6 420 39 516 1.61e-39 148
Msa0465950 MtrunA17_Chr7g0243681 28.306 484 256 20 6 416 11 476 2.66e-39 147
Msa0465950 MtrunA17_Chr8g0374931 26.305 479 274 13 9 419 14 481 7.77e-39 146
Msa0465950 MtrunA17_Chr7g0243861 26.994 489 267 15 6 419 14 487 9.12e-39 146
Msa0465950 MtrunA17_Chr1g0153461 36.986 219 119 5 224 423 1 219 9.41e-39 139
Msa0465950 MtrunA17_Chr2g0294921 26.458 480 272 14 9 419 163 630 9.77e-39 147
Msa0465950 MtrunA17_Chr4g0072761 31.864 295 173 6 130 419 181 452 1.03e-38 145
Msa0465950 MtrunA17_Chr5g0442541 28.024 496 248 19 3 420 2 466 1.10e-38 145
Msa0465950 MtrunA17_Chr7g0243631 28.016 489 262 21 6 419 13 486 1.14e-38 145
Msa0465950 MtrunA17_Chr4g0066151 27.484 473 265 14 7 416 19 476 1.37e-38 145
Msa0465950 MtrunA17_Chr8g0339601 31.338 284 160 8 147 407 47 318 1.47e-38 142
Msa0465950 MtrunA17_Chr8g0339461 33.452 281 149 9 161 415 199 467 1.76e-38 144
Msa0465950 MtrunA17_Chr8g0334861 25.934 482 273 14 1 418 1 462 1.87e-38 144
Msa0465950 MtrunA17_Chr4g0066281 27.451 459 272 13 9 416 15 463 2.14e-38 144
Msa0465950 MtrunA17_Chr8g0334831 27.371 464 247 18 1 390 1 448 2.16e-38 144
Msa0465950 MtrunA17_Chr6g0462531 29.781 319 183 9 122 417 162 462 2.28e-38 144
Msa0465950 MtrunA17_Chr6g0454281 47.059 153 73 2 2 146 6 158 2.90e-38 137
Msa0465950 MtrunA17_Chr3g0106231 26.923 468 256 15 6 420 18 452 3.58e-38 144
Msa0465950 MtrunA17_Chr7g0218311 26.625 477 272 14 9 419 19 483 3.64e-38 144
Msa0465950 MtrunA17_Chr5g0442601 27.621 496 265 19 3 422 401 878 4.32e-38 147
Msa0465950 MtrunA17_Chr5g0442601 34.555 191 99 5 192 366 164 344 7.71e-27 113
Msa0465950 MtrunA17_Chr8g0374971 26.316 475 277 15 9 419 15 480 5.06e-38 144
Msa0465950 MtrunA17_Chr6g0462521 30.537 298 176 6 134 417 168 448 5.62e-38 143
Msa0465950 MtrunA17_Chr5g0431401 25.210 476 265 15 2 419 6 448 1.07e-37 142
Msa0465950 MtrunA17_Chr8g0374901 27.742 465 275 14 9 416 15 475 1.13e-37 142
Msa0465950 MtrunA17_Chr8g0339631 31.229 301 170 10 130 408 172 457 1.28e-37 142
Msa0465950 MtrunA17_Chr7g0243781 26.104 498 253 16 3 416 6 472 1.31e-37 142
Msa0465950 MtrunA17_Chr5g0442521 26.190 504 261 18 3 422 2 478 1.52e-37 142
Msa0465950 MtrunA17_Chr8g0374941 26.439 469 278 14 9 416 952 1414 1.57e-37 145
Msa0465950 MtrunA17_Chr8g0374941 26.327 452 270 15 9 401 479 926 5.59e-33 132
Msa0465950 MtrunA17_Chr8g0374941 25.219 456 274 13 9 403 14 463 1.57e-32 130
Msa0465950 MtrunA17_Chr5g0431421 26.160 474 265 15 2 420 6 449 3.96e-37 140
Msa0465950 MtrunA17_Chr5g0401851 26.358 497 256 17 8 419 12 483 7.73e-37 140
Msa0465950 MtrunA17_Chr8g0339451 32.013 303 168 10 130 408 164 452 9.37e-37 140
Msa0465950 MtrunA17_Chr4g0044481 28.646 384 238 12 6 363 27 400 9.50e-37 139
Msa0465950 MtrunA17_Chr7g0243871 26.789 489 264 18 3 419 6 472 1.45e-36 139
Msa0465950 MtrunA17_Chr5g0431371 25.486 463 272 13 6 419 10 448 1.50e-36 139
Msa0465950 MtrunA17_Chr5g0442491 26.104 498 268 16 3 422 2 477 3.48e-36 138
Msa0465950 MtrunA17_Chr4g0042931 25.000 472 287 15 2 418 3 462 5.12e-36 137
Msa0465950 MtrunA17_Chr5g0410941 25.052 483 287 14 1 419 18 489 6.94e-36 138
Msa0465950 MtrunA17_Chr5g0432731 31.227 269 155 7 165 421 48 298 8.58e-36 133
Msa0465950 MtrunA17_Chr4g0044521 27.215 474 263 17 7 417 10 464 1.12e-35 137
Msa0465950 MtrunA17_Chr6g0463851 26.360 478 276 16 9 419 14 482 1.16e-35 137
Msa0465950 MtrunA17_Chr7g0243761 26.907 472 259 16 6 419 11 454 2.40e-35 136
Msa0465950 MtrunA17_Chr8g0350881 26.582 474 275 14 7 416 13 477 3.26e-35 135
Msa0465950 MtrunA17_Chr4g0066131 26.160 474 270 14 7 416 14 471 4.19e-35 135
Msa0465950 MtrunA17_Chr4g0044501 25.714 490 279 15 6 425 10 484 4.58e-35 135
Msa0465950 MtrunA17_Chr3g0118741 96.667 60 2 0 1 60 1 60 6.95e-35 124
Msa0465950 MtrunA17_Chr5g0429711 33.091 275 151 10 164 423 209 465 7.77e-35 134
Msa0465950 MtrunA17_Chr5g0403641 31.010 287 155 8 169 424 236 510 1.13e-34 135
Msa0465950 MtrunA17_Chr8g0339441 36.139 202 110 4 226 408 217 418 1.55e-34 133
Msa0465950 MtrunA17_Chr3g0118731 74.390 82 18 1 58 136 28 109 3.55e-34 125
Msa0465950 MtrunA17_Chr8g0370941 25.726 482 276 18 4 410 5 479 5.08e-34 133
Msa0465950 MtrunA17_Chr5g0420801 25.887 479 271 18 2 419 3 458 1.06e-33 131
Msa0465950 MtrunA17_Chr2g0329111 26.141 482 256 16 1 405 1 459 3.24e-33 130
Msa0465950 MtrunA17_Chr4g0066171 26.722 479 273 16 1 419 16 476 3.48e-33 130
Msa0465950 MtrunA17_Chr2g0307961 26.205 477 272 15 5 420 12 469 1.03e-32 129
Msa0465950 MtrunA17_Chr6g0454111 42.143 140 79 1 130 269 46 183 1.09e-32 122
Msa0465950 MtrunA17_Chr5g0429681 27.766 479 276 17 1 423 39 503 2.16e-32 128
Msa0465950 MtrunA17_Chr5g0416741 24.380 484 281 12 7 419 14 483 2.38e-32 128
Msa0465950 MtrunA17_Chr4g0042891 33.083 266 148 8 169 418 213 464 4.99e-32 127
Msa0465950 MtrunA17_Chr8g0382021 25.745 470 268 15 11 419 39 488 9.21e-32 126
Msa0465950 MtrunA17_Chr8g0361411 26.124 467 271 18 6 419 8 453 1.12e-31 125
Msa0465950 MtrunA17_Chr6g0463861 24.324 481 289 15 1 419 6 473 7.35e-31 123
Msa0465950 MtrunA17_Chr3g0106251 28.716 296 181 7 134 420 20 294 8.13e-31 120
Msa0465950 MtrunA17_Chr5g0416821 25.910 467 284 14 7 419 15 473 2.44e-30 122
Msa0465950 MtrunA17_Chr3g0079711 36.413 184 98 4 253 417 3 186 3.42e-30 115
Msa0465950 MtrunA17_Chr7g0241801 27.765 425 252 16 3 396 6 406 4.90e-30 120
Msa0465950 MtrunA17_Chr7g0243711 33.491 212 123 5 225 419 106 316 5.96e-30 118
Msa0465950 MtrunA17_Chr7g0241781 27.400 427 251 15 3 396 6 406 9.55e-30 119
Msa0465950 MtrunA17_Chr2g0294941 28.102 274 170 7 151 401 92 361 3.19e-29 117
Msa0465950 MtrunA17_Chr2g0302961 25.417 480 273 14 6 419 5 465 4.93e-29 118
Msa0465950 MtrunA17_Chr1g0196851 24.508 457 266 15 2 400 45 480 6.15e-29 118
Msa0465950 MtrunA17_Chr8g0369341 24.380 484 278 16 2 417 3 466 3.29e-28 116
Msa0465950 MtrunA17_Chr1g0165701 24.224 483 281 15 7 419 16 483 3.32e-28 116
Msa0465950 MtrunA17_Chr1g0207881 37.879 132 76 1 294 419 253 384 3.32e-28 115
Msa0465950 MtrunA17_Chr8g0355221 29.773 309 185 8 133 419 188 486 4.39e-28 115
Msa0465950 MtrunA17_Chr6g0463891 25.208 480 284 12 7 419 13 484 4.75e-28 115
Msa0465950 MtrunA17_Chr2g0302991 27.852 298 187 6 139 419 176 462 8.91e-28 114
Msa0465950 MtrunA17_Chr7g0243911 34.483 203 105 6 223 408 18 209 1.80e-27 108
Msa0465950 MtrunA17_Chr5g0427561 55.952 84 37 0 337 420 2 85 9.89e-27 102
Msa0465950 MtrunA17_Chr4g0029131 23.831 449 278 14 1 400 7 440 2.54e-26 111
Msa0465950 MtrunA17_Chr7g0243611 30.651 261 154 10 131 372 44 296 3.93e-26 107
Msa0465950 MtrunA17_Chr8g0336321 27.640 445 253 18 6 393 7 439 6.73e-26 109
Msa0465950 MtrunA17_Chr8g0336251 27.252 444 256 16 6 393 7 439 1.14e-25 108
Msa0465950 MtrunA17_Chr7g0232351 25.743 404 207 15 1 337 1 378 2.84e-25 106
Msa0465950 MtrunA17_Chr5g0431431 26.260 377 228 12 6 375 10 343 3.34e-25 105
Msa0465950 MtrunA17_Chr6g0482061 28.485 330 204 10 89 407 159 467 3.78e-25 107
Msa0465950 MtrunA17_Chr7g0243811 25.253 396 234 10 18 366 1 381 8.50e-25 105
Msa0465950 MtrunA17_Chr6g0466831 24.946 465 287 17 6 423 18 467 1.58e-24 105
Msa0465950 MtrunA17_Chr6g0466841 24.893 466 286 18 6 423 18 467 3.85e-24 104
Msa0465950 MtrunA17_Chr8g0367221 26.005 423 231 16 6 370 798 1196 7.60e-24 104
Msa0465950 MtrunA17_Chr8g0367221 25.783 415 241 18 6 370 12 409 6.54e-23 102
Msa0465950 MtrunA17_Chr8g0367221 30.348 201 121 7 156 352 1488 1673 5.02e-19 90.1
Msa0465950 MtrunA17_Chr5g0409591 30.677 251 133 10 168 386 212 453 1.22e-23 102
Msa0465950 MtrunA17_Chr6g0464091 25.495 404 234 14 2 353 13 401 2.70e-23 101
Msa0465950 MtrunA17_Chr8g0337381 42.742 124 65 2 299 418 3 124 1.49e-22 92.8
Msa0465950 MtrunA17_Chr2g0278721 32.367 207 127 6 197 397 756 955 1.01e-21 98.2
Msa0465950 MtrunA17_Chr2g0278721 25.313 399 230 15 6 353 15 396 9.88e-20 92.0
Msa0465950 MtrunA17_Chr4g0040691 23.729 472 282 17 6 420 8 458 2.08e-21 96.3
Msa0465950 MtrunA17_Chr6g0454391 62.500 64 24 0 312 375 11 74 4.01e-21 88.6
Msa0465950 MtrunA17_Chr7g0250021 27.576 330 173 12 6 289 12 321 2.34e-20 91.7
Msa0465950 MtrunA17_Chr5g0427571 31.707 205 125 7 197 393 76 273 2.67e-19 87.8
Msa0465950 MtrunA17_Chr4g0029151 28.495 186 121 4 227 400 263 448 3.92e-19 89.4
Msa0465950 MtrunA17_Chr4g0040711 24.205 409 237 14 6 362 8 395 7.16e-19 88.6
Msa0465950 MtrunA17_Chr3g0092031 33.846 130 82 2 224 352 1 127 1.52e-18 83.6
Msa0465950 MtrunA17_Chr8g0357361 30.303 198 128 6 165 360 60 249 3.52e-18 84.0
Msa0465950 MtrunA17_Chr2g0278741 22.472 445 275 16 6 396 97 525 9.17e-18 85.5
Msa0465950 MtrunA17_Chr2g0283041 26.705 176 121 3 229 396 258 433 2.01e-17 84.0
Msa0465950 MtrunA17_Chr4g0069611 34.400 125 78 2 229 352 269 390 6.19e-17 82.8
Msa0465950 MtrunA17_Chr4g0066141 34.228 149 81 4 285 416 200 348 8.43e-17 81.3
Msa0465950 MtrunA17_Chr7g0231631 28.372 215 138 5 213 419 53 259 1.32e-16 79.7
Msa0465950 MtrunA17_Chr2g0319761 23.077 468 290 17 6 420 8 458 9.35e-16 79.0
Msa0465950 MtrunA17_Chr2g0302851 31.538 130 85 2 224 352 265 391 3.22e-14 74.3
Msa0465950 MtrunA17_Chr4g0039881 29.570 186 117 6 170 352 193 367 1.40e-13 72.4
Msa0465950 MtrunA17_Chr2g0319731 25.871 201 139 5 229 420 276 475 3.07e-13 71.2
Msa0465950 MtrunA17_Chr2g0319801 27.835 194 123 4 229 420 259 437 4.89e-13 70.5
Msa0465950 MtrunA17_Chr2g0319791 21.822 472 302 20 1 421 1 456 5.23e-13 70.5
Msa0465950 MtrunA17_Chr2g0319751 22.246 472 305 18 1 422 478 937 8.95e-13 70.5
Msa0465950 MtrunA17_Chr7g0243731 41.176 68 39 1 296 362 6 73 4.23e-12 61.6
Msa0465950 MtrunA17_Chr7g0267931 67.568 37 11 1 11 46 25 61 7.73e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465950 AT1G22380.1 46.624 474 197 4 2 420 9 481 9.60e-155 447
Msa0465950 AT1G22400.1 43.460 474 211 4 3 420 10 482 2.92e-150 436
Msa0465950 AT1G22340.1 43.067 476 216 3 3 423 10 485 6.71e-149 432
Msa0465950 AT1G22360.1 44.397 473 207 4 3 420 7 478 9.18e-149 431
Msa0465950 AT1G22370.2 45.513 468 204 4 3 420 10 476 1.24e-147 428
Msa0465950 AT1G22360.2 43.129 473 201 5 3 420 7 466 2.03e-140 410
Msa0465950 AT1G78270.1 42.469 478 219 5 3 425 10 486 6.20e-133 391
Msa0465950 AT1G22370.1 49.141 291 146 2 131 420 17 306 7.80e-99 298
Msa0465950 AT5G59590.1 33.691 466 231 10 3 416 7 446 6.66e-76 243
Msa0465950 AT3G46650.1 34.375 448 237 11 1 415 5 428 5.54e-74 238
Msa0465950 AT3G46680.1 34.120 466 234 11 1 416 4 446 2.31e-73 237
Msa0465950 AT3G46660.1 33.689 469 236 12 1 416 6 452 1.38e-72 235
Msa0465950 AT3G46700.1 33.188 458 242 10 3 417 6 442 2.66e-72 234
Msa0465950 AT5G59580.1 32.415 472 240 11 4 423 7 451 8.10e-72 233
Msa0465950 AT3G46690.1 33.262 466 236 11 3 417 6 447 8.32e-72 233
Msa0465950 AT5G38010.1 31.838 468 249 12 2 419 6 453 3.32e-70 229
Msa0465950 AT2G36970.1 30.189 477 260 10 3 419 7 470 3.57e-70 230
Msa0465950 AT3G46670.1 32.618 466 243 12 1 416 1 445 7.97e-70 228
Msa0465950 AT3G11340.1 32.829 463 245 12 2 420 5 445 1.05e-68 224
Msa0465950 AT5G38040.1 32.009 453 240 12 14 419 18 449 1.35e-68 224
Msa0465950 AT3G21560.1 29.474 475 262 11 5 419 11 472 1.82e-67 223
Msa0465950 AT3G55700.1 30.526 475 247 14 6 424 8 455 5.40e-64 213
Msa0465950 AT4G15500.1 27.975 479 259 10 5 420 8 463 1.47e-63 212
Msa0465950 AT4G15480.1 29.202 476 259 12 6 419 19 478 2.73e-63 212
Msa0465950 AT3G55710.1 30.818 477 247 13 6 424 8 459 3.36e-63 211
Msa0465950 AT3G46720.1 33.117 462 233 13 3 417 6 438 3.92e-63 210
Msa0465950 AT5G05890.1 30.901 466 249 11 6 419 8 452 1.80e-62 209
Msa0465950 AT5G05880.1 30.152 461 255 10 6 419 8 448 3.05e-62 208
Msa0465950 AT4G15490.1 28.898 481 255 11 6 420 8 467 3.63e-61 206
Msa0465950 AT5G05870.1 30.753 465 253 11 6 419 8 454 5.43e-61 205
Msa0465950 AT2G28080.1 30.342 468 252 10 10 420 22 472 1.61e-60 204
Msa0465950 AT2G31750.1 29.194 459 276 11 4 421 6 456 2.29e-60 203
Msa0465950 AT2G31750.2 29.194 459 276 11 4 421 6 456 6.90e-60 202
Msa0465950 AT5G05860.1 31.304 460 251 10 6 420 9 448 4.13e-59 199
Msa0465950 AT2G43840.2 28.352 455 270 10 6 419 7 446 2.24e-57 195
Msa0465950 AT2G43840.1 28.603 458 269 11 4 419 5 446 2.29e-57 195
Msa0465950 AT2G43820.1 29.067 461 265 13 3 419 4 446 5.90e-57 194
Msa0465950 AT1G05680.1 29.202 476 250 14 1 416 1 449 8.27e-56 191
Msa0465950 AT5G05900.1 28.541 466 259 11 6 421 8 449 3.12e-55 189
Msa0465950 AT4G14090.1 30.426 470 248 15 3 418 10 454 4.76e-54 186
Msa0465950 AT2G26480.1 28.785 469 256 12 3 420 5 446 1.26e-53 185
Msa0465950 AT1G05675.1 34.843 287 169 5 138 416 173 449 1.65e-53 185
Msa0465950 AT1G05560.1 28.421 475 265 12 5 425 4 457 1.80e-53 185
Msa0465950 AT1G05560.2 28.842 475 263 13 5 425 54 507 4.75e-53 185
Msa0465950 AT3G02100.1 28.662 471 253 12 4 416 11 456 4.90e-53 184
Msa0465950 AT1G24100.1 28.541 473 258 13 4 419 9 458 4.15e-52 181
Msa0465950 AT2G23250.1 28.477 453 264 17 9 419 1 435 6.27e-51 177
Msa0465950 AT2G31790.1 28.172 465 267 10 3 416 5 453 1.72e-50 177
Msa0465950 AT2G36750.1 30.165 484 262 14 6 421 10 485 2.16e-49 175
Msa0465950 AT4G01070.1 35.943 281 149 6 147 408 188 456 3.98e-48 171
Msa0465950 AT1G05530.1 27.061 473 269 14 4 420 3 455 4.30e-48 171
Msa0465950 AT4G15550.1 26.804 485 260 14 5 418 12 472 4.51e-48 171
Msa0465950 AT2G23260.1 26.797 459 282 16 3 419 7 453 1.21e-47 169
Msa0465950 AT2G36800.1 28.630 489 265 15 6 421 12 489 1.38e-47 170
Msa0465950 AT2G36770.1 27.664 488 272 15 6 422 14 491 8.13e-47 168
Msa0465950 AT5G17050.1 30.743 296 182 4 130 421 182 458 2.86e-46 166
Msa0465950 AT2G30140.1 30.544 478 245 19 2 423 9 455 3.70e-46 165
Msa0465950 AT2G30140.2 29.607 483 242 18 2 423 9 454 5.10e-46 165
Msa0465950 AT5G17040.2 30.556 324 205 5 102 420 30 338 1.36e-45 161
Msa0465950 AT2G15480.1 27.105 487 276 13 1 419 5 480 3.68e-45 163
Msa0465950 AT3G53160.1 27.812 489 272 14 6 423 8 486 4.08e-45 163
Msa0465950 AT4G34131.1 27.959 490 261 17 3 418 7 478 5.36e-45 163
Msa0465950 AT5G66690.1 28.131 487 264 16 4 422 5 473 8.59e-45 162
Msa0465950 AT2G36780.1 29.630 486 263 17 6 421 14 490 1.12e-44 162
Msa0465950 AT1G10400.1 29.545 484 247 18 3 418 4 461 1.38e-44 161
Msa0465950 AT5G17040.1 31.164 292 186 3 130 420 163 440 1.95e-44 160
Msa0465950 AT5G26310.1 28.745 494 241 21 4 418 5 466 2.91e-44 161
Msa0465950 AT2G15480.2 27.163 497 273 15 1 419 5 490 5.72e-44 160
Msa0465950 AT2G15490.3 27.311 476 279 11 6 419 7 477 9.61e-44 159
Msa0465950 AT2G36790.1 28.247 485 271 14 6 421 13 489 6.24e-43 157
Msa0465950 AT2G15490.1 27.349 479 278 12 6 419 7 480 9.34e-43 157
Msa0465950 AT4G34135.1 28.395 486 265 16 3 418 8 480 9.63e-42 154
Msa0465950 AT5G17030.1 29.352 293 192 3 130 421 179 457 1.33e-41 153
Msa0465950 AT2G36760.1 27.198 489 273 14 6 422 14 491 3.71e-41 152
Msa0465950 AT1G01390.1 27.593 482 259 15 5 418 7 466 3.92e-41 152
Msa0465950 AT1G01390.2 27.593 482 259 15 5 418 24 483 4.47e-41 152
Msa0465950 AT3G22250.1 26.623 462 242 15 3 392 5 441 2.72e-40 150
Msa0465950 AT2G30150.2 27.292 469 257 14 6 419 13 452 4.08e-40 149
Msa0465950 AT1G30530.1 29.153 295 186 4 130 420 176 451 8.40e-40 148
Msa0465950 AT5G37950.2 30.579 363 178 12 22 337 2 337 1.75e-39 145
Msa0465950 AT1G01420.1 32.069 290 167 7 147 418 188 465 2.31e-39 147
Msa0465950 AT3G53150.1 26.000 500 284 12 3 422 19 512 2.51e-39 148
Msa0465950 AT1G01420.2 32.069 290 167 7 147 418 191 468 2.54e-39 147
Msa0465950 AT5G37950.1 30.081 369 178 12 22 337 2 343 1.54e-38 142
Msa0465950 AT3G50740.1 26.400 500 257 18 4 421 5 475 1.99e-38 145
Msa0465950 AT2G30150.1 26.882 465 256 14 10 419 1 436 2.86e-38 144
Msa0465950 AT4G36770.1 26.609 466 254 14 6 404 4 448 3.62e-38 144
Msa0465950 AT2G18570.1 26.939 490 249 19 1 412 1 459 1.70e-37 142
Msa0465950 AT4G34138.1 25.880 483 278 11 4 419 9 478 3.03e-37 142
Msa0465950 AT3G16520.3 31.438 299 178 9 130 417 175 457 1.26e-36 139
Msa0465950 AT5G14860.1 33.566 286 160 10 147 419 207 475 1.46e-35 137
Msa0465950 AT2G18560.1 31.773 299 153 11 147 412 89 369 4.47e-35 134
Msa0465950 AT5G03490.1 26.395 466 273 13 3 418 16 461 8.61e-35 134
Msa0465950 AT3G16520.2 31.429 280 165 9 130 398 175 438 2.12e-34 133
Msa0465950 AT3G16520.1 31.429 280 165 9 130 398 175 438 2.30e-34 133
Msa0465950 AT2G16890.2 26.439 469 280 18 6 419 9 467 3.14e-34 133
Msa0465950 AT2G29710.1 25.417 480 272 16 6 420 5 463 5.90e-33 129
Msa0465950 AT3G21790.1 32.000 275 150 9 169 419 217 478 1.46e-32 129
Msa0465950 AT5G12890.1 24.797 492 274 18 6 420 10 482 2.03e-32 128
Msa0465950 AT1G73880.1 25.732 478 272 16 4 420 12 467 2.53e-32 128
Msa0465950 AT4G15260.1 29.352 293 170 6 155 424 81 359 3.88e-32 125
Msa0465950 AT2G29730.1 30.189 265 164 8 165 420 211 463 3.93e-32 127
Msa0465950 AT3G21750.1 28.527 319 181 7 132 422 172 471 2.76e-31 125
Msa0465950 AT3G21760.1 29.808 312 179 10 132 419 185 480 1.99e-30 122
Msa0465950 AT3G21800.1 31.786 280 155 8 169 424 213 480 5.41e-30 121
Msa0465950 AT3G21780.1 29.592 294 169 8 155 424 194 473 6.26e-30 121
Msa0465950 AT1G07260.1 29.699 266 160 7 169 420 220 472 2.54e-29 119
Msa0465950 AT1G51210.1 26.018 442 247 15 4 393 18 431 3.34e-29 118
Msa0465950 AT4G15280.1 29.758 289 158 8 162 422 205 476 4.54e-29 119
Msa0465950 AT1G07240.1 29.104 268 162 7 169 420 221 476 8.12e-29 118
Msa0465950 AT4G15280.2 29.758 289 158 8 162 422 237 508 8.20e-29 118
Msa0465950 AT2G29740.1 29.520 271 162 9 160 416 216 471 1.44e-28 117
Msa0465950 AT1G07250.1 28.839 267 168 5 169 424 222 477 4.67e-28 116
Msa0465950 AT5G49690.1 25.172 437 257 11 6 391 10 427 1.99e-26 111
Msa0465950 AT2G29750.1 26.882 279 176 8 160 425 216 479 2.62e-26 110
Msa0465950 AT2G16890.3 25.653 421 249 17 6 372 9 419 9.40e-26 108
Msa0465950 AT1G06000.1 24.670 454 278 18 3 419 7 433 8.20e-25 106
Msa0465950 AT2G22590.1 24.439 446 271 13 4 395 13 446 2.73e-23 102
Msa0465950 AT5G65550.1 28.517 263 158 7 166 417 217 460 8.61e-23 100
Msa0465950 AT5G54010.1 23.667 469 291 13 1 422 1 449 1.93e-21 96.7
Msa0465950 AT5G53990.1 34.965 143 88 2 229 370 244 382 4.28e-20 92.4
Msa0465950 AT1G64910.1 35.172 145 89 2 227 370 242 382 1.04e-19 91.3
Msa0465950 AT4G27570.1 23.380 432 276 15 6 396 7 424 1.28e-19 91.3
Msa0465950 AT4G34135.2 26.866 335 165 12 3 273 8 326 5.07e-19 88.2
Msa0465950 AT3G29630.1 22.963 405 260 9 1 372 1 386 1.65e-18 87.8
Msa0465950 AT3G29630.2 24.750 400 233 12 1 372 1 360 3.42e-18 86.7
Msa0465950 AT4G27560.1 25.871 201 141 4 227 420 248 447 2.75e-17 84.0
Msa0465950 AT4G09500.1 26.486 185 129 3 229 406 219 403 1.59e-16 81.6
Msa0465950 AT4G09500.2 26.486 185 129 3 229 406 244 428 1.79e-16 81.6
Msa0465950 AT5G54060.1 27.230 213 140 6 197 401 243 448 4.85e-16 80.5
Msa0465950 AT1G64920.1 30.588 170 109 3 227 391 242 407 9.29e-16 79.3
Msa0465950 AT2G22930.1 20.968 434 289 13 1 396 1 418 2.00e-15 78.2
Msa0465950 AT1G50580.1 26.203 187 131 3 229 408 245 431 1.18e-14 75.9
Msa0465950 AT4G01070.2 30.488 164 88 4 147 296 188 339 1.29e-13 72.0

Find 86 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCAAATGGTTCAAGTTTA+TGG 0.081901 3_3:+66459118 Msa0465950:CDS
TGATATTATGTTTGATTTCT+TGG 0.169944 3_3:+66458927 Msa0465950:CDS
TTAAAACCATGTTCCTTCTT+AGG 0.170040 3_3:-66459096 None:intergenic
GCACAAAATGGTTGAATAAA+TGG 0.184599 3_3:+66459157 Msa0465950:CDS
AGCTATAGATGCTACTAATT+TGG 0.205470 3_3:+66459671 Msa0465950:CDS
CATAATTGCTGATGGACTTT+CGG 0.255854 3_3:+66457573 Msa0465950:CDS
ATAATTGCTGATGGACTTTC+GGG 0.284728 3_3:+66457574 Msa0465950:CDS
CATTGTGATGAAGAACCTTT+TGG 0.286892 3_3:-66459728 None:intergenic
GATGGACTTTCGGGCTTTGC+TGG 0.289676 3_3:+66457583 Msa0465950:CDS
CTAATACAACATGTGGCTTT+TGG 0.304454 3_3:-66457234 None:intergenic
ATGAAGCCCTTGCCGCTCTT+AGG 0.305846 3_3:+66459016 Msa0465950:CDS
GGACCAATGCTATATATGTT+TGG 0.319476 3_3:-66459048 None:intergenic
GCTATAGATGCTACTAATTT+GGG 0.327366 3_3:+66459672 Msa0465950:CDS
GACCAATGCTATATATGTTT+GGG 0.332388 3_3:-66459047 None:intergenic
TGCTTGCTCATCCATCAGTT+GGG 0.338073 3_3:+66459403 Msa0465950:CDS
ACAATTGAAACCATTTCTTC+AGG 0.342589 3_3:+66459456 Msa0465950:CDS
ATGGTCTCAAATTGAAAATC+TGG 0.342620 3_3:-66457406 None:intergenic
CAGGTGTTCCTACTATTTGT+TGG 0.345507 3_3:+66459475 Msa0465950:CDS
CAATTTGAGACCATACTTGA+TGG 0.352097 3_3:+66457415 Msa0465950:CDS
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_3:+66459508 Msa0465950:CDS
ACCGTTGCAACGTAGGAGTT+TGG 0.360613 3_3:-66457302 None:intergenic
CCACTTGAAGGAATTTGCTT+GGG 0.364246 3_3:+66459236 Msa0465950:CDS
TGGAAGAGTAGCAAGAGATT+TGG 0.364715 3_3:+66457603 Msa0465950:CDS
TCAGTCCTATATGTTAATTA+TGG 0.370543 3_3:+66459189 Msa0465950:CDS
TCAGCAATTATGCAAGTAAC+TGG 0.376290 3_3:-66457562 None:intergenic
GATATTATGTTTGATTTCTT+GGG 0.378244 3_3:+66458928 Msa0465950:CDS
TTATGCAACACTTGGAGAAT+AGG 0.381141 3_3:+66459534 Msa0465950:CDS
GGAAGAGTAGCAAGAGATTT+GGG 0.387282 3_3:+66457604 Msa0465950:CDS
TCTTCACCCATTACTACATC+TGG 0.391769 3_3:-66459300 None:intergenic
GTGACCTAGAATGCACAAAA+TGG 0.392379 3_3:+66459145 Msa0465950:CDS
AGTAGGAACACCTGAAGAAA+TGG 0.419675 3_3:-66459466 None:intergenic
GGAAATGATGGAAGGAGAAA+AGG 0.424374 3_3:+66459608 Msa0465950:CDS
TTCTGGTAAACCATCAAGTA+TGG 0.426398 3_3:-66457425 None:intergenic
AAACATAATATCATTTAAAT+CGG 0.427339 3_3:-66458917 None:intergenic
TAATTAACTATGATGTGAAA+AGG 0.437634 3_3:+66459562 Msa0465950:CDS
TGAAGCCCTTGCCGCTCTTA+GGG 0.438198 3_3:+66459017 Msa0465950:CDS
ACCACTTGAAGGAATTTGCT+TGG 0.441871 3_3:+66459235 Msa0465950:CDS
GAAATGATGGAAGGAGAAAA+GGG 0.444552 3_3:+66459609 Msa0465950:CDS
TTTCCATAAGTTAATCCAAA+AGG 0.450715 3_3:+66459713 Msa0465950:CDS
CACTTCCATAATTAACATAT+AGG 0.451185 3_3:-66459194 None:intergenic
AAACGTTTGATAAAATCTCT+TGG 0.455060 3_3:+66457361 Msa0465950:CDS
TATGACAGATCACCACTTGA+AGG 0.456340 3_3:+66459224 Msa0465950:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_3:+66459563 Msa0465950:CDS
TGGTAGGAACTTTCCTAAGA+AGG 0.472098 3_3:+66459083 Msa0465950:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_3:-66459498 None:intergenic
GTGCTTGCTCATCCATCAGT+TGG 0.479121 3_3:+66459402 Msa0465950:CDS
CTAGACGAGGTTAAGGATAG+AGG 0.480369 3_3:+66459348 Msa0465950:CDS
AAGAAAGGCCAACAAATAGT+AGG 0.483470 3_3:-66459483 None:intergenic
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_3:-66457259 None:intergenic
TGATTATCATAGAACTCAAA+TGG 0.491997 3_3:-66459751 None:intergenic
GTTTGATTTCTTGGGTTCTG+AGG 0.496308 3_3:+66458936 Msa0465950:CDS
AGAGTTTCTAGACGAGGTTA+AGG 0.499062 3_3:+66459341 Msa0465950:CDS
GTTACTTGCATAATTGCTGA+TGG 0.499252 3_3:+66457565 Msa0465950:CDS
TCGGTGACTCTCATAAAACT+TGG 0.510649 3_3:-66458898 None:intergenic
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_3:-66459398 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_3:-66457286 None:intergenic
ATTGGTCCACTTCACATGCT+TGG 0.521488 3_3:+66459063 Msa0465950:CDS
CCCAAGCAAATTCCTTCAAG+TGG 0.523214 3_3:-66459236 None:intergenic
AACCCAAACATATATAGCAT+TGG 0.528923 3_3:+66459045 Msa0465950:CDS
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_3:-66457265 None:intergenic
GCTTGCTCATCCATCAGTTG+GGG 0.531389 3_3:+66459404 Msa0465950:CDS
TTTGGCCCTAAGAGCGGCAA+GGG 0.533339 3_3:-66459022 None:intergenic
CACTTGAAGGAATTTGCTTG+GGG 0.535238 3_3:+66459237 Msa0465950:CDS
TGAGACAAAAGAGTTTAGAG+TGG 0.544189 3_3:+66459640 Msa0465950:CDS
GTGAGACCAGATGTAGTAAT+GGG 0.546373 3_3:+66459294 Msa0465950:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_3:-66457285 None:intergenic
GCCAAACTCCTACGTTGCAA+CGG 0.566590 3_3:+66457301 Msa0465950:CDS
GTAGGTATTTATGCAACACT+TGG 0.572740 3_3:+66459526 Msa0465950:CDS
CAACACTTGGAGAATAGGAA+TGG 0.578509 3_3:+66459539 Msa0465950:CDS
AACTTTCCTAAGAAGGAACA+TGG 0.583852 3_3:+66459090 Msa0465950:CDS
TTCCTACCAAGCATGTGAAG+TGG 0.583854 3_3:-66459069 None:intergenic
TGTGAGACCAGATGTAGTAA+TGG 0.596460 3_3:+66459293 Msa0465950:CDS
AATGGTACTAATACAACATG+TGG 0.596910 3_3:-66457241 None:intergenic
TTACTTGCTTCACACAAGGG+TGG 0.602599 3_3:-66457475 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_3:+66459364 Msa0465950:CDS
TGACTCTCATAAAACTTGGA+AGG 0.606477 3_3:-66458894 None:intergenic
GTCCACTTCACATGCTTGGT+AGG 0.606656 3_3:+66459067 Msa0465950:CDS
TTAACATATAGGACTGAGCA+AGG 0.608706 3_3:-66459183 None:intergenic
TGTGAAAACCGTTGCAACGT+AGG 0.610448 3_3:-66457309 None:intergenic
GCCACAAGAGTTTCTAGACG+AGG 0.623546 3_3:+66459335 Msa0465950:CDS
AAATGATGGAAGGAGAAAAG+GGG 0.640498 3_3:+66459610 Msa0465950:CDS
TTAGTACCATTTCCAGCACA+AGG 0.640576 3_3:+66457253 Msa0465950:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_3:-66457335 None:intergenic
TTATGCAAGTAACTGGAACA+TGG 0.656892 3_3:-66457555 None:intergenic
ACCTCGTCTAGAAACTCTTG+TGG 0.667496 3_3:-66459336 None:intergenic
ATAGATGCTACTAATTTGGG+AGG 0.676642 3_3:+66459675 Msa0465950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATTTTTAAATAATTA+TGG + chr3_3:66458222-66458241 Msa0465950:intron 0.0%
!!! TAATATTTTTAAATAATTAT+GGG + chr3_3:66458223-66458242 Msa0465950:intron 0.0%
!! AAAAATTTCATCTAATAATA+TGG + chr3_3:66458014-66458033 Msa0465950:intron 10.0%
!!! CTTAATTTATTTTTTAAAAG+TGG - chr3_3:66458255-66458274 None:intergenic 10.0%
!!! AAAGTAATTTTTAAATTAGA+CGG - chr3_3:66458285-66458304 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr3_3:66458461-66458480 Msa0465950:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr3_3:66458462-66458481 Msa0465950:intron 10.0%
!! AAACATAATATCATTTAAAT+CGG - chr3_3:66458920-66458939 None:intergenic 10.0%
!! AACATCTAAAAATGATTTAA+AGG + chr3_3:66457760-66457779 Msa0465950:intron 15.0%
!!! ATTATTAGATGAAATTTTTG+CGG - chr3_3:66458013-66458032 None:intergenic 15.0%
!! TCAAAATTTCCTAAATTATT+GGG - chr3_3:66458068-66458087 None:intergenic 15.0%
!! TTCAAAATTTCCTAAATTAT+TGG - chr3_3:66458069-66458088 None:intergenic 15.0%
!!! TTTAGGAAATTTTGAATTTT+TGG + chr3_3:66458073-66458092 Msa0465950:intron 15.0%
!!! TTTTTTCTTCTTTTGAATTT+TGG + chr3_3:66458317-66458336 Msa0465950:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr3_3:66458463-66458482 Msa0465950:intron 15.0%
!!! ATAGTAAATTACCATTTTTA+TGG + chr3_3:66459268-66459287 Msa0465950:CDS 15.0%
!! ATCTAAAAATGATTTAAAGG+TGG + chr3_3:66457763-66457782 Msa0465950:intron 20.0%
!!! TTTAAATCCTTTTTTTAGAG+AGG + chr3_3:66457888-66457907 Msa0465950:intron 20.0%
!! TTCAATAAAAAAGTGAGTAT+TGG - chr3_3:66457935-66457954 None:intergenic 20.0%
!! TAATAATATGGATGATTGTT+TGG + chr3_3:66458026-66458045 Msa0465950:intron 20.0%
!!! GCACTTTTTTTTTTTAAGAT+AGG + chr3_3:66458149-66458168 Msa0465950:intron 20.0%
!!! TTATTTTTTAAAAGTGGACT+TGG - chr3_3:66458249-66458268 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr3_3:66458486-66458505 Msa0465950:intron 20.0%
!!! TTGAAATGACTCAATTATTT+TGG + chr3_3:66458573-66458592 Msa0465950:intron 20.0%
!!! TGAAATGACTCAATTATTTT+GGG + chr3_3:66458574-66458593 Msa0465950:intron 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + chr3_3:66458596-66458615 Msa0465950:intron 20.0%
!!! ATTGTCTATCATCTTATTTT+TGG - chr3_3:66458757-66458776 None:intergenic 20.0%
!!! ATTTTCATCTAAAAATGTCA+TGG - chr3_3:66458803-66458822 None:intergenic 20.0%
!!! TGATATTATGTTTGATTTCT+TGG + chr3_3:66458927-66458946 Msa0465950:CDS 20.0%
!!! GATATTATGTTTGATTTCTT+GGG + chr3_3:66458928-66458947 Msa0465950:CDS 20.0%
!! TAATTAACTATGATGTGAAA+AGG + chr3_3:66459562-66459581 Msa0465950:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG + chr3_3:66459563-66459582 Msa0465950:CDS 20.0%
! AAACGTTTGATAAAATCTCT+TGG + chr3_3:66457361-66457380 Msa0465950:CDS 25.0%
!! TTTTTGATAAGCTCTTTGAA+AGG - chr3_3:66457517-66457536 None:intergenic 25.0%
! TTCCATTCAAAGGTAAATTA+TGG + chr3_3:66457713-66457732 Msa0465950:intron 25.0%
! AACCATAATTTACCTTTGAA+TGG - chr3_3:66457718-66457737 None:intergenic 25.0%
!! TATTGAGTCTCAACATTTTA+TGG + chr3_3:66457962-66457981 Msa0465950:intron 25.0%
!! ATTGAGTCTCAACATTTTAT+GGG + chr3_3:66457963-66457982 Msa0465950:intron 25.0%
! GAAAGTGGAATATATTGAAT+TGG + chr3_3:66458485-66458504 Msa0465950:intron 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + chr3_3:66458595-66458614 Msa0465950:intron 25.0%
!! ATGAGACAATATTTTTCTAG+AGG - chr3_3:66458701-66458720 None:intergenic 25.0%
! AAATATTGTCTCATCACAAA+TGG + chr3_3:66458707-66458726 Msa0465950:intron 25.0%
! GATGAAAATTTCATTGTTGA+TGG + chr3_3:66458814-66458833 Msa0465950:intron 25.0%
! TCAGTCCTATATGTTAATTA+TGG + chr3_3:66459189-66459208 Msa0465950:CDS 25.0%
! CACTTCCATAATTAACATAT+AGG - chr3_3:66459197-66459216 None:intergenic 25.0%
! TTTCCATAAGTTAATCCAAA+AGG + chr3_3:66459713-66459732 Msa0465950:CDS 25.0%
AATGGTACTAATACAACATG+TGG - chr3_3:66457244-66457263 None:intergenic 30.0%
! GAGATTTTATCAAACGTTTG+TGG - chr3_3:66457360-66457379 None:intergenic 30.0%
ATGGTCTCAAATTGAAAATC+TGG - chr3_3:66457409-66457428 None:intergenic 30.0%
! TTTTTACTTGCTTCACACAA+GGG - chr3_3:66457481-66457500 None:intergenic 30.0%
! ATTTTTACTTGCTTCACACA+AGG - chr3_3:66457482-66457501 None:intergenic 30.0%
! GCATTCAAGAAATACAGTTT+TGG + chr3_3:66457626-66457645 Msa0465950:intron 30.0%
TAATATGGATGATTGTTTGG+TGG + chr3_3:66458029-66458048 Msa0465950:intron 30.0%
TCGTATCATTTATAGTTACG+TGG + chr3_3:66458348-66458367 Msa0465950:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr3_3:66458470-66458489 Msa0465950:intron 30.0%
!! GCTATATATGTTTGGGTTTT+TGG - chr3_3:66459043-66459062 None:intergenic 30.0%
AACCCAAACATATATAGCAT+TGG + chr3_3:66459045-66459064 Msa0465950:CDS 30.0%
GACCAATGCTATATATGTTT+GGG - chr3_3:66459050-66459069 None:intergenic 30.0%
TTAAAACCATGTTCCTTCTT+AGG - chr3_3:66459099-66459118 None:intergenic 30.0%
!! TAAGAAGGAACATGGTTTTA+AGG + chr3_3:66459098-66459117 Msa0465950:CDS 30.0%
GCACAAAATGGTTGAATAAA+TGG + chr3_3:66459157-66459176 Msa0465950:CDS 30.0%
ATAGAGGATACATAACAAGT+TGG + chr3_3:66459364-66459383 Msa0465950:CDS 30.0%
ACAATTGAAACCATTTCTTC+AGG + chr3_3:66459456-66459475 Msa0465950:CDS 30.0%
! AGAGATAACAGAACTTTTGA+TGG + chr3_3:66459587-66459606 Msa0465950:CDS 30.0%
! AGAACTTTTGATGGAAATGA+TGG + chr3_3:66459596-66459615 Msa0465950:CDS 30.0%
AGCTATAGATGCTACTAATT+TGG + chr3_3:66459671-66459690 Msa0465950:CDS 30.0%
GCTATAGATGCTACTAATTT+GGG + chr3_3:66459672-66459691 Msa0465950:CDS 30.0%
! GAACCTTTTGGATTAACTTA+TGG - chr3_3:66459719-66459738 None:intergenic 30.0%
! CTAATACAACATGTGGCTTT+TGG - chr3_3:66457237-66457256 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG - chr3_3:66457338-66457357 None:intergenic 35.0%
! CAATTTGAGACCATACTTGA+TGG + chr3_3:66457415-66457434 Msa0465950:CDS 35.0%
TTCTGGTAAACCATCAAGTA+TGG - chr3_3:66457428-66457447 None:intergenic 35.0%
GTTGCATCTTTATCTGATTC+TGG - chr3_3:66457445-66457464 None:intergenic 35.0%
TTATGCAAGTAACTGGAACA+TGG - chr3_3:66457558-66457577 None:intergenic 35.0%
TCAGCAATTATGCAAGTAAC+TGG - chr3_3:66457565-66457584 None:intergenic 35.0%
GTTACTTGCATAATTGCTGA+TGG + chr3_3:66457565-66457584 Msa0465950:CDS 35.0%
!! CATAATTGCTGATGGACTTT+CGG + chr3_3:66457573-66457592 Msa0465950:CDS 35.0%
!! ATAATTGCTGATGGACTTTC+GGG + chr3_3:66457574-66457593 Msa0465950:CDS 35.0%
!! TATGATGAGCTTGTTAAGAG+AGG + chr3_3:66457685-66457704 Msa0465950:intron 35.0%
AGAGGAATTCTTCCATTCAA+AGG + chr3_3:66457703-66457722 Msa0465950:intron 35.0%
! AAGCACTCCTCTCTAAAAAA+AGG - chr3_3:66457898-66457917 None:intergenic 35.0%
AGCAGATGACCCAATAATTT+AGG + chr3_3:66458056-66458075 Msa0465950:intron 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr3_3:66458609-66458628 Msa0465950:intron 35.0%
TGACTCTCATAAAACTTGGA+AGG - chr3_3:66458897-66458916 None:intergenic 35.0%
GGACCAATGCTATATATGTT+TGG - chr3_3:66459051-66459070 None:intergenic 35.0%
AACTTTCCTAAGAAGGAACA+TGG + chr3_3:66459090-66459109 Msa0465950:CDS 35.0%
!!! GAACATGGTTTTAAGGCAAA+TGG + chr3_3:66459105-66459124 Msa0465950:CDS 35.0%
! AGGCAAATGGTTCAAGTTTA+TGG + chr3_3:66459118-66459137 Msa0465950:CDS 35.0%
! TCAACCATTTTGTGCATTCT+AGG - chr3_3:66459152-66459171 None:intergenic 35.0%
TTAACATATAGGACTGAGCA+AGG - chr3_3:66459186-66459205 None:intergenic 35.0%
GGTCTCACAATCCATAAAAA+TGG - chr3_3:66459282-66459301 None:intergenic 35.0%
! TTTTTCTAACTCATTGCGGT+TGG + chr3_3:66459427-66459446 Msa0465950:CDS 35.0%
AAGAAAGGCCAACAAATAGT+AGG - chr3_3:66459486-66459505 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG + chr3_3:66459508-66459527 Msa0465950:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66459526-66459545 Msa0465950:CDS 35.0%
TTATGCAACACTTGGAGAAT+AGG + chr3_3:66459534-66459553 Msa0465950:CDS 35.0%
!! CTTTTGATGGAAATGATGGA+AGG + chr3_3:66459600-66459619 Msa0465950:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+GGG + chr3_3:66459609-66459628 Msa0465950:CDS 35.0%
! AAATGATGGAAGGAGAAAAG+GGG + chr3_3:66459610-66459629 Msa0465950:CDS 35.0%
TGAGACAAAAGAGTTTAGAG+TGG + chr3_3:66459640-66459659 Msa0465950:CDS 35.0%
ATAGATGCTACTAATTTGGG+AGG + chr3_3:66459675-66459694 Msa0465950:CDS 35.0%
! CATTGTGATGAAGAACCTTT+TGG - chr3_3:66459731-66459750 None:intergenic 35.0%
TTAGTACCATTTCCAGCACA+AGG + chr3_3:66457253-66457272 Msa0465950:CDS 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG - chr3_3:66457288-66457307 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG - chr3_3:66457289-66457308 None:intergenic 40.0%
!! TCTTGGAGCTGATTTTGTGA+AGG + chr3_3:66457378-66457397 Msa0465950:CDS 40.0%
!! CTTGGAGCTGATTTTGTGAA+GGG + chr3_3:66457379-66457398 Msa0465950:CDS 40.0%
TGGAAGAGTAGCAAGAGATT+TGG + chr3_3:66457603-66457622 Msa0465950:CDS 40.0%
GGAAGAGTAGCAAGAGATTT+GGG + chr3_3:66457604-66457623 Msa0465950:CDS 40.0%
AAAAATATACTCCCTCCGTC+CGG + chr3_3:66458405-66458424 Msa0465950:intron 40.0%
! CCAAACTGACTCAGATATTC+CGG - chr3_3:66458427-66458446 None:intergenic 40.0%
!! TTTCATTGTTGATGGCACCT+TGG + chr3_3:66458822-66458841 Msa0465950:intron 40.0%
CCAATCTAAACACGTATCCA+AGG - chr3_3:66458842-66458861 None:intergenic 40.0%
CCTTGGATACGTGTTTAGAT+TGG + chr3_3:66458839-66458858 Msa0465950:intron 40.0%
ACGTGTTTAGATTGGATCTC+TGG + chr3_3:66458847-66458866 Msa0465950:intron 40.0%
TCGGTGACTCTCATAAAACT+TGG - chr3_3:66458901-66458920 None:intergenic 40.0%
! GTTTGATTTCTTGGGTTCTG+AGG + chr3_3:66458936-66458955 Msa0465950:CDS 40.0%
! CTGAGGCACAGAATTGTTTT+AGG + chr3_3:66458953-66458972 Msa0465950:CDS 40.0%
TGGTAGGAACTTTCCTAAGA+AGG + chr3_3:66459083-66459102 Msa0465950:CDS 40.0%
GTGACCTAGAATGCACAAAA+TGG + chr3_3:66459145-66459164 Msa0465950:CDS 40.0%
TATGACAGATCACCACTTGA+AGG + chr3_3:66459224-66459243 Msa0465950:CDS 40.0%
! ACCACTTGAAGGAATTTGCT+TGG + chr3_3:66459235-66459254 Msa0465950:CDS 40.0%
! CCACTTGAAGGAATTTGCTT+GGG + chr3_3:66459236-66459255 Msa0465950:CDS 40.0%
! CACTTGAAGGAATTTGCTTG+GGG + chr3_3:66459237-66459256 Msa0465950:CDS 40.0%
TGTGAGACCAGATGTAGTAA+TGG + chr3_3:66459293-66459312 Msa0465950:CDS 40.0%
GTGAGACCAGATGTAGTAAT+GGG + chr3_3:66459294-66459313 Msa0465950:CDS 40.0%
TCTTCACCCATTACTACATC+TGG - chr3_3:66459303-66459322 None:intergenic 40.0%
! AGAGTTTCTAGACGAGGTTA+AGG + chr3_3:66459341-66459360 Msa0465950:CDS 40.0%
GTTAGAAAAACCCCAACTGA+TGG - chr3_3:66459417-66459436 None:intergenic 40.0%
! GGGGTTTTTCTAACTCATTG+CGG + chr3_3:66459423-66459442 Msa0465950:CDS 40.0%
AGTAGGAACACCTGAAGAAA+TGG - chr3_3:66459469-66459488 None:intergenic 40.0%
CAGGTGTTCCTACTATTTGT+TGG + chr3_3:66459475-66459494 Msa0465950:CDS 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG - chr3_3:66459501-66459520 None:intergenic 40.0%
CAACACTTGGAGAATAGGAA+TGG + chr3_3:66459539-66459558 Msa0465950:CDS 40.0%
! GGAAATGATGGAAGGAGAAA+AGG + chr3_3:66459608-66459627 Msa0465950:CDS 40.0%
ACATGACCTTGTGCTGGAAA+TGG - chr3_3:66457262-66457281 None:intergenic 45.0%
TGTGAAAACCGTTGCAACGT+AGG - chr3_3:66457312-66457331 None:intergenic 45.0%
TTACTTGCTTCACACAAGGG+TGG - chr3_3:66457478-66457497 None:intergenic 45.0%
! TTTTGGACTGCTTCTGCTTG+TGG + chr3_3:66457643-66457662 Msa0465950:intron 45.0%
! ACTGACTCAGATATTCCGGA+CGG - chr3_3:66458423-66458442 None:intergenic 45.0%
CCGGAATATCTGAGTCAGTT+TGG + chr3_3:66458424-66458443 Msa0465950:intron 45.0%
ATGGGTCAGATATTCCGGAA+CGG + chr3_3:66458614-66458633 Msa0465950:intron 45.0%
ATTGGTCCACTTCACATGCT+TGG + chr3_3:66459063-66459082 Msa0465950:CDS 45.0%
TTCCTACCAAGCATGTGAAG+TGG - chr3_3:66459072-66459091 None:intergenic 45.0%
CCCAAGCAAATTCCTTCAAG+TGG - chr3_3:66459239-66459258 None:intergenic 45.0%
ACCTCGTCTAGAAACTCTTG+TGG - chr3_3:66459339-66459358 None:intergenic 45.0%
CTAGACGAGGTTAAGGATAG+AGG + chr3_3:66459348-66459367 Msa0465950:CDS 45.0%
TGCTTGCTCATCCATCAGTT+GGG + chr3_3:66459403-66459422 Msa0465950:CDS 45.0%
!!! TATAATATTTTGAAATAATT+AGG + chr3_3:66458117-66458136 Msa0465950:intron 5.0%
!!! TTAAAAAATAAATTAAGTTT+TGG + chr3_3:66458258-66458277 Msa0465950:intron 5.0%
GCCAAACTCCTACGTTGCAA+CGG + chr3_3:66457301-66457320 Msa0465950:CDS 50.0%
ACCGTTGCAACGTAGGAGTT+TGG - chr3_3:66457305-66457324 None:intergenic 50.0%
! TGCTTCTGCTTGTGGCTTTG+TGG + chr3_3:66457651-66457670 Msa0465950:intron 50.0%
!! GCTTCTGCTTGTGGCTTTGT+GGG + chr3_3:66457652-66457671 Msa0465950:intron 50.0%
ACTCAGATATTCCGGACGGA+GGG - chr3_3:66458419-66458438 None:intergenic 50.0%
GTCAGATATTCCGGAACGGA+GGG + chr3_3:66458618-66458637 Msa0465950:intron 50.0%
ATCAAGTACTCCCTCCGTTC+CGG - chr3_3:66458631-66458650 None:intergenic 50.0%
!!! TGGGTTTTTGGCCCTAAGAG+CGG - chr3_3:66459031-66459050 None:intergenic 50.0%
GTCCACTTCACATGCTTGGT+AGG + chr3_3:66459067-66459086 Msa0465950:CDS 50.0%
! GCCACAAGAGTTTCTAGACG+AGG + chr3_3:66459335-66459354 Msa0465950:CDS 50.0%
! CTGATGGATGAGCAAGCACT+TGG - chr3_3:66459401-66459420 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG + chr3_3:66459402-66459421 Msa0465950:CDS 50.0%
GCTTGCTCATCCATCAGTTG+GGG + chr3_3:66459404-66459423 Msa0465950:CDS 50.0%
GGGTTCACATGACCTTGTGC+TGG - chr3_3:66457268-66457287 None:intergenic 55.0%
! GATGGACTTTCGGGCTTTGC+TGG + chr3_3:66457583-66457602 Msa0465950:CDS 55.0%
GACTCAGATATTCCGGACGG+AGG - chr3_3:66458420-66458439 None:intergenic 55.0%
GGTCAGATATTCCGGAACGG+AGG + chr3_3:66458617-66458636 Msa0465950:intron 55.0%
ATGAAGCCCTTGCCGCTCTT+AGG + chr3_3:66459016-66459035 Msa0465950:CDS 55.0%
TGAAGCCCTTGCCGCTCTTA+GGG + chr3_3:66459017-66459036 Msa0465950:CDS 55.0%
TTTGGCCCTAAGAGCGGCAA+GGG - chr3_3:66459025-66459044 None:intergenic 55.0%
! TTTTGGCCCTAAGAGCGGCA+AGG - chr3_3:66459026-66459045 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66457229 66459758 66457229 ID=Msa0465950;Name=Msa0465950
chr3_3 mRNA 66457229 66459758 66457229 ID=Msa0465950-mRNA-1;Parent=Msa0465950;Name=Msa0465950-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|3|0|425
chr3_3 exon 66457229 66457436 66457229 ID=Msa0465950-mRNA-1:exon:15077;Parent=Msa0465950-mRNA-1
chr3_3 exon 66457446 66457641 66457446 ID=Msa0465950-mRNA-1:exon:15078;Parent=Msa0465950-mRNA-1
chr3_3 exon 66458885 66459758 66458885 ID=Msa0465950-mRNA-1:exon:15079;Parent=Msa0465950-mRNA-1
chr3_3 CDS 66457229 66457436 66457229 ID=Msa0465950-mRNA-1:cds;Parent=Msa0465950-mRNA-1
chr3_3 CDS 66457446 66457641 66457446 ID=Msa0465950-mRNA-1:cds;Parent=Msa0465950-mRNA-1
chr3_3 CDS 66458885 66459758 66458885 ID=Msa0465950-mRNA-1:cds;Parent=Msa0465950-mRNA-1
Gene Sequence

>Msa0465950

ATGGACCAAAAGCCACATGTTGTATTAGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGCAACGGTTTTCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGATAAAATCTCTTGGAGCTGATTTTGTGAAGGGTCTACCAGATTTTCAATTTGAGACCATACTTGATGAATCAGATAAAGATGCAACACAAGATGTTCCACCCTTGTGTGAAGCAAGTAAAAATAACTTCTATGCTCCTTTCAAAGAGCTTATCAAAAAGTTGAACTCTTCATCACACCATGTTCCAGTTACTTGCATAATTGCTGATGGACTTTCGGGCTTTGCTGGAAGAGTAGCAAGAGATTTGGGCATTCAAGAAATACAACTAAAAGACCTTCCAAGTTTTATGAGAGTCACCGATTTAAATGATATTATGTTTGATTTCTTGGGTTCTGAGGCACAGAATTGTTTTAGGTCATCAACAATTATAATCAACACATTTGAAGAATTAGAACATGAAGCCCTTGCCGCTCTTAGGGCCAAAAACCCAAACATATATAGCATTGGTCCACTTCACATGCTTGGTAGGAACTTTCCTAAGAAGGAACATGGTTTTAAGGCAAATGGTTCAAGTTTATGGAAAAGTGACCTAGAATGCACAAAATGGTTGAATAAATGGAAACCTTGCTCAGTCCTATATGTTAATTATGGAAGTGTAACTATTATGACAGATCACCACTTGAAGGAATTTGCTTGGGGAATAGCAAATAGTAAATTACCATTTTTATGGATTGTGAGACCAGATGTAGTAATGGGTGAAGAAATTTCAACTTTGCCACAAGAGTTTCTAGACGAGGTTAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGGGTTTTTCTAACTCATTGCGGTTGGAATTCTACAATTGAAACCATTTCTTCAGGTGTTCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAGAATAGGAATGGTAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTTTGATGGAAATGATGGAAGGAGAAAAGGGGAAAAAAATGAGACAAAAGAGTTTAGAGTGGAAGAAGAAAGCTATAGATGCTACTAATTTGGGAGGATCATCATACAATAATTTCCATAAGTTAATCCAAAAGGTTCTTCATCACAATGCCATTTGA

Protein sequence

>Msa0465950

MDQKPHVVLVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLIKSLGADFVKGLPDFQFETILDESDKDATQDVPPLCEASKNNFYAPFKELIKKLNSSSHHVPVTCIIADGLSGFAGRVARDLGIQEIQLKDLPSFMRVTDLNDIMFDFLGSEAQNCFRSSTIIINTFEELEHEALAALRAKNPNIYSIGPLHMLGRNFPKKEHGFKANGSSLWKSDLECTKWLNKWKPCSVLYVNYGSVTIMTDHHLKEFAWGIANSKLPFLWIVRPDVVMGEEISTLPQEFLDEVKDRGYITSWCMQDQVLAHPSVGVFLTHCGWNSTIETISSGVPTICWPFFAEQQTNCRYLCNTWRIGMVINYDVKREEITELLMEMMEGEKGKKMRQKSLEWKKKAIDATNLGGSSYNNFHKLIQKVLHHNAI*