Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415870 | XP_013460702.1 | 95.636 | 275 | 10 | 1 | 1 | 273 | 1 | 275 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415870 | sp|Q9LHT0|TRNHF_ARATH | 67.181 | 259 | 85 | 0 | 10 | 268 | 4 | 262 | 1.56e-128 | 368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415870 | A0A072UZ65 | 95.636 | 275 | 10 | 1 | 1 | 273 | 1 | 275 | 0.0 | 537 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026130 | Msa0415870 | 0.804043 | 2.610721e-49 | -8.615850e-47 |
| Msa0134610 | Msa0415870 | 0.807502 | 4.898669e-50 | -8.615850e-47 |
| Msa0214550 | Msa0415870 | 0.802962 | 4.374303e-49 | -8.615850e-47 |
| Msa0415870 | Msa0461630 | 0.803013 | 4.268338e-49 | -8.615850e-47 |
| Msa0415870 | Msa0638480 | 0.804301 | 2.306680e-49 | -8.615850e-47 |
| Msa0415870 | Msa1074370 | 0.810251 | 1.265086e-50 | -8.615850e-47 |
| Msa0415870 | Msa1157870 | 0.808408 | 3.143734e-50 | -8.615850e-47 |
| Msa0415870 | Msa1216360 | 0.807097 | 5.970736e-50 | -8.615850e-47 |
| Msa0415870 | Msa1369150 | 0.803650 | 3.151075e-49 | -8.615850e-47 |
| Msa0315980 | Msa0415870 | 0.812063 | 5.118159e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415870 | MtrunA17_Chr3g0112141 | 95.636 | 275 | 10 | 1 | 1 | 273 | 1 | 275 | 0.0 | 537 |
| Msa0415870 | MtrunA17_Chr3g0112171 | 84.444 | 270 | 42 | 0 | 1 | 270 | 1 | 270 | 1.87e-167 | 464 |
| Msa0415870 | MtrunA17_Chr3g0112151 | 81.818 | 264 | 48 | 0 | 1 | 264 | 72 | 335 | 7.45e-161 | 450 |
| Msa0415870 | MtrunA17_Chr3g0112261 | 72.973 | 259 | 70 | 0 | 12 | 270 | 16 | 274 | 7.94e-143 | 402 |
| Msa0415870 | MtrunA17_Chr3g0112271 | 70.588 | 272 | 78 | 1 | 1 | 270 | 1 | 272 | 1.03e-140 | 396 |
| Msa0415870 | MtrunA17_Chr4g0032141 | 59.690 | 258 | 104 | 0 | 10 | 267 | 51 | 308 | 7.86e-117 | 337 |
| Msa0415870 | MtrunA17_Chr7g0239481 | 57.647 | 255 | 104 | 1 | 9 | 259 | 9 | 263 | 1.13e-102 | 300 |
| Msa0415870 | MtrunA17_Chr7g0239451 | 56.809 | 257 | 107 | 1 | 9 | 261 | 10 | 266 | 1.14e-100 | 295 |
| Msa0415870 | MtrunA17_Chr7g0239491 | 57.031 | 256 | 107 | 2 | 9 | 261 | 9 | 264 | 1.62e-98 | 289 |
| Msa0415870 | MtrunA17_Chr4g0032181 | 58.621 | 232 | 96 | 0 | 31 | 262 | 17 | 248 | 4.90e-98 | 287 |
| Msa0415870 | MtrunA17_Chr7g0239501 | 57.031 | 256 | 106 | 2 | 9 | 260 | 10 | 265 | 5.64e-98 | 288 |
| Msa0415870 | MtrunA17_Chr7g0239511 | 54.688 | 256 | 112 | 1 | 9 | 260 | 10 | 265 | 7.91e-97 | 285 |
| Msa0415870 | MtrunA17_Chr7g0239461 | 49.219 | 256 | 78 | 3 | 9 | 261 | 10 | 216 | 7.04e-75 | 227 |
| Msa0415870 | MtrunA17_Chr4g0075531 | 32.932 | 249 | 156 | 6 | 15 | 259 | 7 | 248 | 1.57e-34 | 125 |
| Msa0415870 | MtrunA17_Chr3g0112161 | 59.292 | 113 | 16 | 2 | 123 | 234 | 1 | 84 | 3.09e-32 | 114 |
| Msa0415870 | MtrunA17_Chr3g0112321 | 54.545 | 99 | 29 | 2 | 147 | 242 | 2 | 87 | 1.41e-28 | 104 |
| Msa0415870 | MtrunA17_Chr7g0259531 | 33.074 | 257 | 152 | 10 | 15 | 259 | 11 | 259 | 1.50e-27 | 107 |
| Msa0415870 | MtrunA17_Chr7g0259521 | 32.540 | 252 | 160 | 8 | 15 | 259 | 6 | 254 | 2.09e-27 | 106 |
| Msa0415870 | MtrunA17_Chr3g0122901 | 29.508 | 244 | 161 | 5 | 21 | 259 | 81 | 318 | 1.05e-26 | 106 |
| Msa0415870 | MtrunA17_Chr7g0244061 | 30.325 | 277 | 155 | 8 | 15 | 262 | 29 | 296 | 2.61e-25 | 102 |
| Msa0415870 | MtrunA17_Chr7g0252031 | 30.258 | 271 | 167 | 8 | 9 | 261 | 22 | 288 | 1.22e-24 | 100 |
| Msa0415870 | MtrunA17_Chr4g0028911 | 29.231 | 260 | 171 | 9 | 15 | 264 | 11 | 267 | 2.23e-23 | 96.3 |
| Msa0415870 | MtrunA17_Chr4g0028921 | 28.846 | 260 | 172 | 9 | 15 | 264 | 11 | 267 | 6.29e-23 | 95.1 |
| Msa0415870 | MtrunA17_Chr7g0268591 | 27.652 | 264 | 177 | 6 | 8 | 261 | 26 | 285 | 1.24e-21 | 92.0 |
| Msa0415870 | MtrunA17_Chr4g0074511 | 28.464 | 267 | 179 | 6 | 6 | 263 | 31 | 294 | 1.24e-20 | 89.0 |
| Msa0415870 | MtrunA17_Chr4g0044131 | 27.881 | 269 | 174 | 9 | 15 | 272 | 8 | 267 | 1.45e-20 | 88.6 |
| Msa0415870 | MtrunA17_Chr4g0040371 | 30.385 | 260 | 162 | 10 | 15 | 261 | 19 | 272 | 3.95e-20 | 87.4 |
| Msa0415870 | MtrunA17_Chr4g0026001 | 29.615 | 260 | 164 | 10 | 15 | 264 | 14 | 264 | 1.80e-19 | 85.5 |
| Msa0415870 | MtrunA17_Chr8g0357481 | 27.481 | 262 | 163 | 7 | 15 | 259 | 14 | 265 | 3.53e-19 | 85.1 |
| Msa0415870 | MtrunA17_Chr6g0459261 | 28.947 | 266 | 171 | 10 | 5 | 259 | 15 | 273 | 4.04e-19 | 84.7 |
| Msa0415870 | MtrunA17_Chr0c30g0494101 | 28.731 | 268 | 175 | 8 | 6 | 263 | 31 | 292 | 4.88e-19 | 84.7 |
| Msa0415870 | MtrunA17_Chr6g0459301 | 29.104 | 268 | 169 | 11 | 5 | 259 | 3 | 262 | 6.48e-18 | 81.3 |
| Msa0415870 | MtrunA17_Chr1g0182511 | 29.297 | 256 | 164 | 9 | 15 | 259 | 14 | 263 | 6.55e-18 | 81.3 |
| Msa0415870 | MtrunA17_Chr7g0267011 | 30.108 | 186 | 123 | 4 | 15 | 197 | 8 | 189 | 3.49e-17 | 77.8 |
| Msa0415870 | MtrunA17_Chr8g0381191 | 30.698 | 215 | 120 | 6 | 6 | 202 | 34 | 237 | 3.63e-17 | 79.7 |
| Msa0415870 | MtrunA17_Chr3g0084871 | 29.658 | 263 | 160 | 10 | 15 | 260 | 16 | 270 | 4.37e-17 | 79.0 |
| Msa0415870 | MtrunA17_Chr2g0324021 | 26.848 | 257 | 176 | 7 | 11 | 260 | 2 | 253 | 8.19e-17 | 78.2 |
| Msa0415870 | MtrunA17_Chr4g0044111 | 29.032 | 279 | 160 | 12 | 1 | 260 | 1 | 260 | 8.87e-17 | 78.2 |
| Msa0415870 | MtrunA17_Chr4g0025981 | 27.203 | 261 | 172 | 8 | 16 | 264 | 42 | 296 | 8.92e-17 | 79.0 |
| Msa0415870 | MtrunA17_Chr4g0025971 | 26.136 | 264 | 178 | 9 | 10 | 264 | 9 | 264 | 1.28e-16 | 77.8 |
| Msa0415870 | MtrunA17_Chr7g0266981 | 29.032 | 279 | 160 | 12 | 1 | 260 | 1 | 260 | 2.81e-16 | 76.6 |
| Msa0415870 | MtrunA17_Chr6g0459351 | 28.358 | 268 | 170 | 10 | 5 | 259 | 3 | 261 | 3.89e-16 | 76.3 |
| Msa0415870 | MtrunA17_Chr7g0272961 | 27.734 | 256 | 174 | 7 | 15 | 262 | 40 | 292 | 3.99e-16 | 76.6 |
| Msa0415870 | MtrunA17_Chr6g0459271 | 28.195 | 266 | 173 | 8 | 5 | 259 | 3 | 261 | 4.77e-16 | 75.9 |
| Msa0415870 | MtrunA17_Chr6g0459331 | 27.652 | 264 | 177 | 8 | 5 | 259 | 3 | 261 | 7.14e-16 | 75.5 |
| Msa0415870 | MtrunA17_Chr7g0267001 | 25.843 | 267 | 164 | 9 | 15 | 272 | 8 | 249 | 1.55e-15 | 74.3 |
| Msa0415870 | MtrunA17_Chr7g0270441 | 28.244 | 262 | 167 | 9 | 11 | 260 | 2 | 254 | 5.44e-15 | 73.2 |
| Msa0415870 | MtrunA17_Chr6g0459281 | 27.007 | 274 | 178 | 10 | 5 | 265 | 3 | 267 | 7.36e-15 | 72.8 |
| Msa0415870 | MtrunA17_Chr1g0191751 | 26.459 | 257 | 178 | 6 | 15 | 263 | 101 | 354 | 9.78e-15 | 73.2 |
| Msa0415870 | MtrunA17_Chr7g0266891 | 27.413 | 259 | 164 | 10 | 15 | 260 | 7 | 254 | 8.43e-14 | 69.7 |
| Msa0415870 | MtrunA17_Chr3g0131521 | 32.653 | 147 | 97 | 2 | 8 | 154 | 25 | 169 | 1.96e-13 | 68.9 |
| Msa0415870 | MtrunA17_Chr7g0270451 | 26.437 | 261 | 184 | 6 | 12 | 267 | 3 | 260 | 2.90e-13 | 68.2 |
| Msa0415870 | MtrunA17_Chr1g0171831 | 24.490 | 245 | 169 | 10 | 21 | 251 | 20 | 262 | 5.38e-13 | 67.4 |
| Msa0415870 | MtrunA17_Chr3g0123251 | 27.228 | 202 | 124 | 4 | 17 | 204 | 53 | 245 | 7.07e-13 | 67.4 |
| Msa0415870 | MtrunA17_Chr8g0355281 | 26.087 | 207 | 143 | 5 | 7 | 204 | 61 | 266 | 2.76e-12 | 65.9 |
| Msa0415870 | MtrunA17_Chr7g0249571 | 26.230 | 183 | 125 | 4 | 22 | 197 | 45 | 224 | 1.73e-11 | 63.5 |
| Msa0415870 | MtrunA17_Chr4g0038121 | 25.253 | 297 | 181 | 9 | 15 | 273 | 91 | 384 | 5.09e-11 | 62.4 |
| Msa0415870 | MtrunA17_Chr1g0160511 | 31.293 | 147 | 99 | 2 | 8 | 154 | 30 | 174 | 7.37e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415870 | AT5G06060.1 | 67.181 | 259 | 85 | 0 | 10 | 268 | 4 | 262 | 1.59e-129 | 368 |
| Msa0415870 | AT2G29150.1 | 60.000 | 265 | 104 | 2 | 1 | 264 | 1 | 264 | 2.05e-115 | 332 |
| Msa0415870 | AT2G29350.1 | 60.755 | 265 | 101 | 2 | 1 | 264 | 1 | 263 | 2.62e-114 | 330 |
| Msa0415870 | AT2G29290.2 | 61.004 | 259 | 99 | 1 | 10 | 266 | 2 | 260 | 3.80e-114 | 329 |
| Msa0415870 | AT2G29260.1 | 60.392 | 255 | 101 | 0 | 12 | 266 | 65 | 319 | 1.23e-112 | 327 |
| Msa0415870 | AT2G29360.1 | 58.868 | 265 | 108 | 1 | 1 | 264 | 1 | 265 | 3.57e-111 | 322 |
| Msa0415870 | AT1G07440.1 | 58.846 | 260 | 104 | 2 | 9 | 266 | 6 | 264 | 5.72e-109 | 316 |
| Msa0415870 | AT2G29370.1 | 56.604 | 265 | 114 | 1 | 1 | 264 | 1 | 265 | 5.30e-106 | 308 |
| Msa0415870 | AT2G29340.2 | 57.471 | 261 | 109 | 1 | 10 | 268 | 2 | 262 | 2.93e-105 | 306 |
| Msa0415870 | AT2G29340.1 | 56.981 | 265 | 112 | 1 | 10 | 272 | 2 | 266 | 7.77e-105 | 307 |
| Msa0415870 | AT1G07450.1 | 58.893 | 253 | 103 | 1 | 12 | 264 | 5 | 256 | 5.77e-104 | 303 |
| Msa0415870 | AT2G30670.1 | 58.039 | 255 | 107 | 0 | 10 | 264 | 2 | 256 | 1.09e-103 | 302 |
| Msa0415870 | AT2G29330.1 | 58.846 | 260 | 103 | 3 | 10 | 266 | 2 | 260 | 3.42e-103 | 301 |
| Msa0415870 | AT2G29290.1 | 60.338 | 237 | 92 | 1 | 32 | 266 | 7 | 243 | 2.55e-101 | 296 |
| Msa0415870 | AT2G29310.1 | 56.471 | 255 | 111 | 0 | 10 | 264 | 2 | 256 | 1.25e-100 | 295 |
| Msa0415870 | AT2G29320.1 | 57.588 | 257 | 106 | 2 | 13 | 266 | 11 | 267 | 2.56e-99 | 291 |
| Msa0415870 | AT2G29300.1 | 55.385 | 260 | 113 | 2 | 10 | 266 | 2 | 261 | 2.72e-98 | 289 |
| Msa0415870 | AT2G29300.2 | 55.556 | 252 | 111 | 1 | 10 | 260 | 2 | 253 | 2.81e-95 | 282 |
| Msa0415870 | AT2G29350.3 | 59.735 | 226 | 88 | 2 | 40 | 264 | 2 | 225 | 2.41e-94 | 278 |
| Msa0415870 | AT2G29320.2 | 56.485 | 239 | 101 | 2 | 31 | 266 | 11 | 249 | 1.39e-88 | 264 |
| Msa0415870 | AT2G29350.2 | 60.680 | 206 | 81 | 0 | 1 | 206 | 1 | 206 | 1.65e-88 | 263 |
| Msa0415870 | AT2G29310.2 | 55.556 | 234 | 104 | 0 | 31 | 264 | 21 | 254 | 2.89e-88 | 263 |
| Msa0415870 | AT2G29340.3 | 57.143 | 196 | 84 | 0 | 10 | 205 | 2 | 197 | 1.42e-77 | 234 |
| Msa0415870 | AT2G29340.4 | 57.143 | 196 | 84 | 0 | 10 | 205 | 2 | 197 | 1.42e-77 | 234 |
| Msa0415870 | AT2G29310.3 | 56.345 | 197 | 86 | 0 | 10 | 206 | 2 | 198 | 9.74e-76 | 229 |
| Msa0415870 | AT2G29320.3 | 58.115 | 191 | 79 | 1 | 13 | 202 | 11 | 201 | 8.40e-74 | 224 |
| Msa0415870 | AT1G07440.2 | 57.317 | 164 | 70 | 0 | 9 | 172 | 6 | 169 | 4.57e-65 | 201 |
| Msa0415870 | AT2G29310.4 | 55.114 | 176 | 79 | 0 | 31 | 206 | 21 | 196 | 6.65e-63 | 196 |
| Msa0415870 | AT2G29170.1 | 60.784 | 102 | 39 | 1 | 1 | 101 | 1 | 102 | 2.56e-35 | 123 |
| Msa0415870 | AT4G05530.1 | 33.333 | 246 | 159 | 5 | 15 | 259 | 9 | 250 | 4.33e-34 | 124 |
| Msa0415870 | AT5G18210.1 | 33.333 | 261 | 159 | 8 | 10 | 259 | 3 | 259 | 9.85e-30 | 113 |
| Msa0415870 | AT3G03980.1 | 32.046 | 259 | 159 | 7 | 15 | 259 | 14 | 269 | 3.93e-28 | 109 |
| Msa0415870 | AT1G24360.1 | 30.204 | 245 | 158 | 6 | 21 | 259 | 80 | 317 | 1.74e-27 | 108 |
| Msa0415870 | AT4G13180.1 | 32.075 | 265 | 166 | 9 | 4 | 259 | 2 | 261 | 4.08e-27 | 106 |
| Msa0415870 | AT5G18210.2 | 31.765 | 255 | 150 | 8 | 14 | 259 | 7 | 246 | 4.15e-25 | 101 |
| Msa0415870 | AT3G04000.1 | 33.462 | 260 | 153 | 9 | 15 | 258 | 14 | 269 | 4.28e-24 | 98.6 |
| Msa0415870 | AT3G55310.1 | 28.295 | 258 | 174 | 7 | 15 | 263 | 17 | 272 | 3.15e-23 | 96.3 |
| Msa0415870 | AT3G55290.1 | 28.295 | 258 | 174 | 7 | 15 | 263 | 18 | 273 | 4.54e-23 | 95.9 |
| Msa0415870 | AT3G55290.2 | 28.295 | 258 | 174 | 7 | 15 | 263 | 17 | 272 | 4.80e-23 | 95.9 |
| Msa0415870 | AT1G54870.2 | 31.518 | 257 | 165 | 6 | 15 | 263 | 84 | 337 | 4.87e-23 | 96.7 |
| Msa0415870 | AT1G54870.1 | 31.518 | 257 | 165 | 6 | 15 | 263 | 82 | 335 | 5.24e-23 | 96.7 |
| Msa0415870 | AT3G46170.1 | 28.682 | 258 | 173 | 7 | 15 | 263 | 26 | 281 | 6.33e-22 | 92.8 |
| Msa0415870 | AT1G63380.1 | 27.413 | 259 | 176 | 6 | 15 | 263 | 17 | 273 | 2.37e-21 | 91.3 |
| Msa0415870 | AT1G62610.2 | 27.027 | 259 | 177 | 6 | 15 | 263 | 13 | 269 | 2.72e-21 | 90.9 |
| Msa0415870 | AT1G63380.3 | 27.413 | 259 | 176 | 6 | 15 | 263 | 15 | 271 | 2.73e-21 | 90.9 |
| Msa0415870 | AT1G62610.1 | 27.027 | 259 | 177 | 6 | 15 | 263 | 14 | 270 | 2.85e-21 | 90.9 |
| Msa0415870 | AT1G63380.4 | 27.413 | 259 | 176 | 6 | 15 | 263 | 19 | 275 | 2.91e-21 | 90.9 |
| Msa0415870 | AT1G62610.3 | 27.027 | 259 | 177 | 6 | 15 | 263 | 15 | 271 | 3.05e-21 | 90.9 |
| Msa0415870 | AT1G62610.4 | 27.027 | 259 | 177 | 6 | 15 | 263 | 19 | 275 | 3.18e-21 | 90.9 |
| Msa0415870 | AT1G63380.2 | 27.413 | 259 | 176 | 6 | 15 | 263 | 22 | 278 | 3.62e-21 | 90.9 |
| Msa0415870 | AT3G26760.1 | 27.925 | 265 | 172 | 6 | 10 | 260 | 31 | 290 | 9.37e-21 | 90.1 |
| Msa0415870 | AT2G17845.1 | 27.099 | 262 | 177 | 7 | 15 | 264 | 47 | 306 | 1.05e-20 | 90.1 |
| Msa0415870 | AT3G05260.1 | 30.469 | 256 | 166 | 6 | 15 | 262 | 37 | 288 | 1.17e-19 | 86.7 |
| Msa0415870 | AT2G47130.1 | 28.906 | 256 | 171 | 7 | 11 | 260 | 2 | 252 | 8.93e-19 | 83.6 |
| Msa0415870 | AT2G47120.1 | 27.444 | 266 | 173 | 11 | 11 | 267 | 2 | 256 | 3.47e-18 | 82.0 |
| Msa0415870 | AT2G47120.2 | 27.481 | 262 | 170 | 11 | 15 | 267 | 7 | 257 | 5.72e-18 | 81.6 |
| Msa0415870 | AT3G12800.1 | 25.098 | 255 | 179 | 6 | 15 | 259 | 10 | 262 | 9.82e-18 | 81.6 |
| Msa0415870 | AT1G52340.1 | 29.008 | 262 | 166 | 8 | 15 | 260 | 18 | 275 | 1.97e-17 | 80.5 |
| Msa0415870 | AT3G26770.1 | 27.519 | 258 | 172 | 5 | 15 | 261 | 41 | 294 | 1.42e-16 | 78.6 |
| Msa0415870 | AT3G42960.1 | 29.851 | 268 | 164 | 9 | 10 | 261 | 3 | 262 | 2.64e-16 | 77.0 |
| Msa0415870 | AT3G51680.1 | 25.940 | 266 | 175 | 7 | 15 | 260 | 32 | 295 | 4.47e-16 | 77.0 |
| Msa0415870 | AT3G29260.1 | 27.626 | 257 | 173 | 7 | 11 | 260 | 2 | 252 | 1.40e-14 | 72.0 |
| Msa0415870 | AT4G03140.1 | 24.609 | 256 | 179 | 5 | 15 | 260 | 78 | 329 | 5.90e-14 | 71.2 |
| Msa0415870 | AT3G06060.1 | 26.768 | 198 | 138 | 2 | 9 | 203 | 31 | 224 | 1.04e-12 | 67.4 |
| Msa0415870 | AT3G06060.2 | 26.768 | 198 | 138 | 2 | 9 | 203 | 48 | 241 | 1.15e-12 | 67.4 |
| Msa0415870 | AT4G13250.1 | 25.391 | 256 | 152 | 8 | 21 | 243 | 165 | 414 | 2.21e-12 | 67.0 |
| Msa0415870 | AT1G49670.1 | 28.436 | 211 | 130 | 7 | 17 | 211 | 6 | 211 | 2.34e-12 | 67.4 |
| Msa0415870 | AT1G49670.2 | 28.436 | 211 | 130 | 7 | 17 | 211 | 6 | 211 | 2.93e-12 | 67.0 |
| Msa0415870 | AT5G04900.1 | 29.444 | 180 | 119 | 5 | 18 | 191 | 80 | 257 | 3.62e-12 | 66.2 |
| Msa0415870 | AT1G10310.1 | 30.588 | 170 | 115 | 3 | 19 | 187 | 19 | 186 | 7.74e-12 | 64.3 |
| Msa0415870 | AT1G67730.1 | 24.424 | 217 | 131 | 6 | 5 | 205 | 45 | 244 | 1.05e-11 | 64.7 |
| Msa0415870 | AT3G47350.2 | 25.108 | 231 | 157 | 8 | 1 | 221 | 29 | 253 | 1.68e-11 | 63.9 |
| Msa0415870 | AT3G47350.1 | 25.108 | 231 | 157 | 8 | 1 | 221 | 29 | 253 | 2.89e-11 | 63.2 |
Find 67 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTACACGCTGCGTATA+TGG | 0.258151 | 3_2:+62404508 | None:intergenic |
| ACTTAATTAATCACTTCTTA+TGG | 0.284170 | 3_2:+62403914 | None:intergenic |
| GGACAAGTTATTTCTGTTGA+TGG | 0.321935 | 3_2:-62403972 | Msa0415870:CDS |
| TATCCTCTTCTTAAAGAATC+TGG | 0.324082 | 3_2:-62404590 | Msa0415870:CDS |
| GAAATAATCTTATGGTACTA+TGG | 0.345179 | 3_2:+62403804 | None:intergenic |
| AATGGGCAGAAGACAATATA+AGG | 0.355538 | 3_2:-62404344 | Msa0415870:CDS |
| GTAGAGGAACTTGCTGAGTT+TGG | 0.369806 | 3_2:-62405496 | Msa0415870:CDS |
| ATCACTTCTTATGGTCATGC+TGG | 0.390380 | 3_2:+62403923 | None:intergenic |
| TCCGTTGTATACTCAATTGT+TGG | 0.398000 | 3_2:+62404674 | None:intergenic |
| CTATAGTGTACACTTGTTCT+AGG | 0.398286 | 3_2:-62405471 | Msa0415870:CDS |
| ATGATGCAGAAATAATCTTA+TGG | 0.409197 | 3_2:+62403796 | None:intergenic |
| CTTCTTAAAGAATCTGGAAA+TGG | 0.409640 | 3_2:-62404584 | Msa0415870:CDS |
| CTCGTCACCGGCGGAACTCG+TGG | 0.413917 | 3_2:-62405535 | Msa0415870:CDS |
| GATATGTCAGTTGGCATAGA+TGG | 0.418094 | 3_2:+62404609 | None:intergenic |
| AAAATTGATGAGTATTAACT+TGG | 0.439582 | 3_2:-62404642 | Msa0415870:CDS |
| TTCATGACTTATGTATAAGT+TGG | 0.442313 | 3_2:-62403881 | Msa0415870:three_prime_UTR |
| CGAACACCCCTAGTATCATT+AGG | 0.444565 | 3_2:+62403696 | None:intergenic |
| TATCTCGAACACCGATAAAA+CGG | 0.446152 | 3_2:-62404064 | Msa0415870:CDS |
| ACAAAACACATACACGTTCT+CGG | 0.463568 | 3_2:-62405648 | Msa0415870:five_prime_UTR |
| ACAAAGGTCTTGCTTGTGAA+TGG | 0.464150 | 3_2:-62404362 | Msa0415870:CDS |
| TTGAATGAGTGGAAGGAGAA+AGG | 0.480371 | 3_2:-62405424 | Msa0415870:CDS |
| TCACTTCTTATGGTCATGCT+GGG | 0.488997 | 3_2:+62403924 | None:intergenic |
| TCTCTGACAAACGTAGGTTC+TGG | 0.495804 | 3_2:-62404533 | Msa0415870:CDS |
| TGAGCTTAGGTAAACAATGT+TGG | 0.501292 | 3_2:-62404713 | Msa0415870:intron |
| TTTCCAGATTCTTTAAGAAG+AGG | 0.503369 | 3_2:+62404587 | None:intergenic |
| GGATCAACTGCGTTGCGCCT+TGG | 0.504412 | 3_2:-62404323 | Msa0415870:CDS |
| ACATGAAGTGTCTTCCTTGG+TGG | 0.509451 | 3_2:-62404030 | Msa0415870:CDS |
| ACCGGCGGAACTCGTGGGAT+CGG | 0.517357 | 3_2:-62405529 | Msa0415870:CDS |
| ACCATATACGCAGCGTGTAA+AGG | 0.519622 | 3_2:-62404509 | Msa0415870:intron |
| CCAGCTGCTTCTTACATCAC+TGG | 0.529349 | 3_2:-62403993 | Msa0415870:CDS |
| AACACATGAAGTGTCTTCCT+TGG | 0.529357 | 3_2:-62404033 | Msa0415870:CDS |
| ACCGATCCCACGAGTTCCGC+CGG | 0.539004 | 3_2:+62405528 | None:intergenic |
| TAAGAAGAGGATATGTCAGT+TGG | 0.546406 | 3_2:+62404600 | None:intergenic |
| CAAGTTATTTCTGTTGATGG+AGG | 0.549415 | 3_2:-62403969 | Msa0415870:CDS |
| CAAAGGTCTTGCTTGTGAAT+GGG | 0.550102 | 3_2:-62404361 | Msa0415870:CDS |
| GGATTCACAGCTCTCGTCAC+CGG | 0.550668 | 3_2:-62405547 | Msa0415870:CDS |
| TTCTCGGTGTTAGCAAGATA+AGG | 0.551658 | 3_2:-62405632 | Msa0415870:five_prime_UTR |
| GATGGAGGATTTACTGCGAA+TGG | 0.556013 | 3_2:-62403954 | Msa0415870:CDS |
| GACTTCTTCTTCTCAAAGAG+AGG | 0.564516 | 3_2:-62405371 | Msa0415870:CDS |
| AAGAGAGGAGCTTGTTCGAA+AGG | 0.571197 | 3_2:-62405356 | Msa0415870:CDS |
| AAACTCAAGATGGTCCCTCA+AGG | 0.573784 | 3_2:-62405569 | Msa0415870:CDS |
| TCGTCACCGGCGGAACTCGT+GGG | 0.574228 | 3_2:-62405534 | Msa0415870:CDS |
| GAGAGCTGTGAATCCCTTGA+GGG | 0.579284 | 3_2:+62405555 | None:intergenic |
| CCACAGTGTACACTTGCTCT+AGG | 0.579593 | 3_2:-62409048 | None:intergenic |
| AACATTACATAATCATTAAG+CGG | 0.585492 | 3_2:+62404288 | None:intergenic |
| AGAGGAGCTTGTTCGAAAGG+TGG | 0.587374 | 3_2:-62405353 | Msa0415870:CDS |
| GATGATTGACATGGAGACAC+GGG | 0.593583 | 3_2:+62403765 | None:intergenic |
| AACTCAAGATGGTCCCTCAA+GGG | 0.601552 | 3_2:-62405568 | Msa0415870:CDS |
| TATGATGAGATGCTTGATGA+AGG | 0.602448 | 3_2:-62403726 | Msa0415870:three_prime_UTR |
| TGATGATTGACATGGAGACA+CGG | 0.602669 | 3_2:+62403764 | None:intergenic |
| AGACCTTCTGATGATTGACA+TGG | 0.607497 | 3_2:+62403756 | None:intergenic |
| AAGAAGCAGCTGGCAGACAA+AGG | 0.611292 | 3_2:+62404003 | None:intergenic |
| GCAATCAATCAGCTGAACAA+AGG | 0.614458 | 3_2:-62404378 | Msa0415870:CDS |
| CGAGAGCTGTGAATCCCTTG+AGG | 0.617629 | 3_2:+62405554 | None:intergenic |
| CCAGTGATGTAAGAAGCAGC+TGG | 0.629413 | 3_2:+62403993 | None:intergenic |
| TTCACAGCTCTCGTCACCGG+CGG | 0.631222 | 3_2:-62405544 | Msa0415870:CDS |
| CAGACAAAGGAAAGCCACCA+AGG | 0.631375 | 3_2:+62404016 | None:intergenic |
| TCTCCATGTCAATCATCAGA+AGG | 0.635136 | 3_2:-62403759 | Msa0415870:three_prime_UTR |
| TGAATGAACGCTTGAATGAG+TGG | 0.642583 | 3_2:-62405435 | Msa0415870:CDS |
| TGAACGCTTGAATGAGTGGA+AGG | 0.643639 | 3_2:-62405431 | Msa0415870:CDS |
| CACTTGTTCTAGGAATGAAG+AGG | 0.665255 | 3_2:-62405461 | Msa0415870:CDS |
| ACTGTAGCAGAAACTCAAGA+TGG | 0.668815 | 3_2:-62405579 | Msa0415870:CDS |
| ACCAACAATTGAGTATACAA+CGG | 0.674590 | 3_2:-62404675 | Msa0415870:CDS |
| GTTGCATCTCTGACAAACGT+AGG | 0.677603 | 3_2:-62404539 | Msa0415870:CDS |
| ACAATGTTGGAACAAATGTG+AGG | 0.690959 | 3_2:-62404700 | Msa0415870:CDS |
| GTTTGTCAGAGATGCAACAG+AGG | 0.693930 | 3_2:+62404544 | None:intergenic |
| GATCGGTCATGCTATCGTAG+AGG | 0.705413 | 3_2:-62405512 | Msa0415870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAATAAATAAA+GGG | + | chr3_2:62406090-62406109 | None:intergenic | 0.0% |
| !! | TAAAATAAATAAATAAATAA+AGG | + | chr3_2:62406091-62406110 | None:intergenic | 0.0% |
| !!! | TATTTATTTATTTTATTATT+TGG | - | chr3_2:62406096-62406115 | Msa0415870:intron | 0.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr3_2:62406360-62406379 | Msa0415870:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr3_2:62406361-62406380 | Msa0415870:intron | 10.0% |
| !! | ATTTAGAAAACAAAGATAAA+TGG | + | chr3_2:62405759-62405778 | None:intergenic | 15.0% |
| !!! | CTAAAAATGATCTATTTTTA+TGG | - | chr3_2:62405863-62405882 | Msa0415870:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr3_2:62406362-62406381 | Msa0415870:intron | 15.0% |
| !! | AAAGTGAAATATATTGAATT+GGG | - | chr3_2:62406385-62406404 | Msa0415870:intron | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | chr3_2:62406425-62406444 | Msa0415870:intron | 15.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | chr3_2:62406426-62406445 | Msa0415870:intron | 15.0% |
| !! | GAAAACGAAATATATAGAAA+AGG | + | chr3_2:62403882-62403901 | None:intergenic | 20.0% |
| !!! | TACTATTTTATTTTTTCACC+AGG | + | chr3_2:62404313-62404332 | None:intergenic | 20.0% |
| !! | AAAATAGTAGAAGTTATAGA+AGG | - | chr3_2:62404324-62404343 | Msa0415870:CDS | 20.0% |
| !! | TTCATAAAGAAAAAATGACA+AGG | + | chr3_2:62405127-62405146 | None:intergenic | 20.0% |
| !! | AATTTGCAATAGATATGAAA+TGG | + | chr3_2:62405843-62405862 | None:intergenic | 20.0% |
| !! | GAATAGATGTTATAAATAAG+AGG | - | chr3_2:62406185-62406204 | Msa0415870:intron | 20.0% |
| !!! | AACAATATCAACTTTTATCA+AGG | + | chr3_2:62406239-62406258 | None:intergenic | 20.0% |
| !! | GAAAGTGAAATATATTGAAT+TGG | - | chr3_2:62406384-62406403 | Msa0415870:intron | 20.0% |
| !!! | TTGAAATGACTCAATTATTT+TGG | - | chr3_2:62406472-62406491 | Msa0415870:intron | 20.0% |
| !!! | TGAAATGACTCAATTATTTT+GGG | - | chr3_2:62406473-62406492 | Msa0415870:intron | 20.0% |
| !!! | GACACTTTTTTTTAGTAAAT+GGG | - | chr3_2:62406495-62406514 | Msa0415870:intron | 20.0% |
| !!! | AAATGTATAACATACTTTTG+AGG | - | chr3_2:62406940-62406959 | Msa0415870:intron | 20.0% |
| !! | ATCTCAAAATTCAATGTATA+AGG | + | chr3_2:62406986-62407005 | None:intergenic | 20.0% |
| !! | ACTTATTGTAGAAAATTTAG+TGG | - | chr3_2:62407576-62407595 | Msa0415870:intron | 20.0% |
| !! | AAGCATAAGAAAATCTTAAA+TGG | + | chr3_2:62407834-62407853 | None:intergenic | 20.0% |
| !! | AAAATTGATGAGTATTAACT+TGG | - | chr3_2:62408102-62408121 | Msa0415870:intron | 20.0% |
| !! | AACATTACATAATCATTAAG+CGG | + | chr3_2:62408459-62408478 | None:intergenic | 20.0% |
| !! | TCAGAAAGAAAAAATGATAA+GGG | + | chr3_2:62408512-62408531 | None:intergenic | 20.0% |
| !! | TTCAGAAAGAAAAAATGATA+AGG | + | chr3_2:62408513-62408532 | None:intergenic | 20.0% |
| !! | ACTTAATTAATCACTTCTTA+TGG | + | chr3_2:62408833-62408852 | None:intergenic | 20.0% |
| ! | ACATCAACATGATATAGAAA+CGG | + | chr3_2:62403904-62403923 | None:intergenic | 25.0% |
| ! | TGTGCTAGTTGAAAATAATT+TGG | + | chr3_2:62404072-62404091 | None:intergenic | 25.0% |
| !! | TGATTTGTATGTTTGTCTTA+AGG | - | chr3_2:62404114-62404133 | Msa0415870:intron | 25.0% |
| ! | CTAATGCATTATAACTCTAA+CGG | - | chr3_2:62404240-62404259 | Msa0415870:intron | 25.0% |
| !! | ATGTTTTATGATTTTCTTCC+TGG | - | chr3_2:62404292-62404311 | Msa0415870:intron | 25.0% |
| !! | CTTGTTATAAGACTTTCTTA+TGG | - | chr3_2:62404530-62404549 | Msa0415870:CDS | 25.0% |
| !!! | CATCACTTTTGAATAATCTT+CGG | + | chr3_2:62404715-62404734 | None:intergenic | 25.0% |
| ! | ATCTTTAATTATCCATTCTC+TGG | - | chr3_2:62405101-62405120 | Msa0415870:intron | 25.0% |
| ! | ATCTGTAGTATTAATCCAAA+TGG | - | chr3_2:62405428-62405447 | Msa0415870:CDS | 25.0% |
| !! | TTTCATCAAATTCTAGTTAG+AGG | - | chr3_2:62405699-62405718 | Msa0415870:intron | 25.0% |
| !! | TTCATCAAATTCTAGTTAGA+GGG | - | chr3_2:62405700-62405719 | Msa0415870:intron | 25.0% |
| !! | TTATGAACTTTGACTTATCT+AGG | - | chr3_2:62405796-62405815 | Msa0415870:intron | 25.0% |
| ! | ATGAAGCCCAATTTATTTAT+GGG | - | chr3_2:62405886-62405905 | Msa0415870:intron | 25.0% |
| ! | ACATGACCCATAAATAAATT+GGG | + | chr3_2:62405895-62405914 | None:intergenic | 25.0% |
| ! | AACATGACCCATAAATAAAT+TGG | + | chr3_2:62405896-62405915 | None:intergenic | 25.0% |
| !!! | CAAAAGTAGAAGTTTTTTCT+TGG | + | chr3_2:62406028-62406047 | None:intergenic | 25.0% |
| !! | CAAGAAAAAACTTCTACTTT+TGG | - | chr3_2:62406026-62406045 | Msa0415870:intron | 25.0% |
| ! | TATTATTTGGCACATAACAA+AGG | - | chr3_2:62406109-62406128 | Msa0415870:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | - | chr3_2:62406494-62406513 | Msa0415870:intron | 25.0% |
| ! | TGTGATTACAGTAATATTGA+TGG | + | chr3_2:62406684-62406703 | None:intergenic | 25.0% |
| !! | ATAAAGGAAACAAAGGTTTT+TGG | + | chr3_2:62406823-62406842 | None:intergenic | 25.0% |
| !! | CCAAAAGTTTGAAATTTGAA+CGG | - | chr3_2:62406907-62406926 | Msa0415870:intron | 25.0% |
| !! | CAAAAGTTTGAAATTTGAAC+GGG | - | chr3_2:62406908-62406927 | Msa0415870:intron | 25.0% |
| !! | AAAAGTTTGAAATTTGAACG+GGG | - | chr3_2:62406909-62406928 | Msa0415870:intron | 25.0% |
| !!! | TGTACAGTGTACTATTTTTT+TGG | + | chr3_2:62407028-62407047 | None:intergenic | 25.0% |
| ! | TAAGGTAACAAAAACAACAA+TGG | - | chr3_2:62407130-62407149 | Msa0415870:intron | 25.0% |
| ! | TCTAATATTCTTATGAGCTT+AGG | - | chr3_2:62408018-62408037 | Msa0415870:intron | 25.0% |
| !! | GTGCTGATAATAATTTGATT+TGG | - | chr3_2:62408546-62408565 | Msa0415870:intron | 25.0% |
| ! | TTAGCATATAACTGTAAGAA+AGG | + | chr3_2:62408637-62408656 | None:intergenic | 25.0% |
| ! | TTCATGACTTATGTATAAGT+TGG | - | chr3_2:62408863-62408882 | Msa0415870:intron | 25.0% |
| ! | GAAATAATCTTATGGTACTA+TGG | + | chr3_2:62408943-62408962 | None:intergenic | 25.0% |
| ! | ATGATGCAGAAATAATCTTA+TGG | + | chr3_2:62408951-62408970 | None:intergenic | 25.0% |
| TTAAATGAGTGGAAAGAGAA+GGG | - | chr3_2:62403743-62403762 | Msa0415870:three_prime_UTR | 30.0% | |
| !!! | GAGAAGGGTTTTTTTGTTTA+TGG | - | chr3_2:62403758-62403777 | Msa0415870:three_prime_UTR | 30.0% |
| !!! | GGGTTTTTTTGTTTATGGAT+CGG | - | chr3_2:62403763-62403782 | Msa0415870:three_prime_UTR | 30.0% |
| ACTATGCTAAGGTTGTTATA+AGG | - | chr3_2:62404387-62404406 | Msa0415870:intron | 30.0% | |
| ! | TGCATTCTTTTGATGTACTT+TGG | - | chr3_2:62404507-62404526 | Msa0415870:intron | 30.0% |
| TGATAATCTTGTGAGCTATT+AGG | - | chr3_2:62404641-62404660 | Msa0415870:CDS | 30.0% | |
| AAAAGTGATGACTACTAACT+TGG | - | chr3_2:62404725-62404744 | Msa0415870:intron | 30.0% | |
| ! | TTTCCAGATTCTTTAAGAAG+AGG | + | chr3_2:62404783-62404802 | None:intergenic | 30.0% |
| CTTCTTAAAGAATCTGGAAA+TGG | - | chr3_2:62404783-62404802 | Msa0415870:intron | 30.0% | |
| AAAAAGTCTTGCTTGTGAAT+GGG | - | chr3_2:62404997-62405016 | Msa0415870:intron | 30.0% | |
| AATGGGCAAAAGACAATATA+AGG | - | chr3_2:62405014-62405033 | Msa0415870:intron | 30.0% | |
| AACCGAAATCATGTATTAGT+AGG | - | chr3_2:62405286-62405305 | Msa0415870:intron | 30.0% | |
| AGCCTACTAATACATGATTT+CGG | + | chr3_2:62405291-62405310 | None:intergenic | 30.0% | |
| CAGCAAAAATTAAAATGCAG+AGG | + | chr3_2:62405370-62405389 | None:intergenic | 30.0% | |
| TGTTATGTTCAGAACTTATG+TGG | - | chr3_2:62405454-62405473 | Msa0415870:CDS | 30.0% | |
| TTAGCAATAAACTGCAAGAA+AGG | + | chr3_2:62405491-62405510 | None:intergenic | 30.0% | |
| !! | TTTACTGTGAATGGATTTTC+TGG | - | chr3_2:62405653-62405672 | Msa0415870:five_prime_UTR | 30.0% |
| !! | TTACTGTGAATGGATTTTCT+GGG | - | chr3_2:62405654-62405673 | Msa0415870:five_prime_UTR | 30.0% |
| GGGTTGTTTAAATAACACAA+TGG | - | chr3_2:62405674-62405693 | Msa0415870:intron | 30.0% | |
| CTTATCTAGGAAGGAATATA+TGG | - | chr3_2:62405809-62405828 | Msa0415870:intron | 30.0% | |
| TAGGAAGGAATATATGGAAA+AGG | - | chr3_2:62405815-62405834 | Msa0415870:intron | 30.0% | |
| GATGAAGCCCAATTTATTTA+TGG | - | chr3_2:62405885-62405904 | Msa0415870:intron | 30.0% | |
| !! | TTCATTAACTTGTGTCCTAA+GGG | + | chr3_2:62405927-62405946 | None:intergenic | 30.0% |
| ACATAACAAAGGAATTCGAT+TGG | - | chr3_2:62406120-62406139 | Msa0415870:intron | 30.0% | |
| ! | AATATTGATGGTAGTTCGAT+TGG | + | chr3_2:62406672-62406691 | None:intergenic | 30.0% |
| ! | TCACATTATCTAGACTTTTG+AGG | - | chr3_2:62406699-62406718 | Msa0415870:intron | 30.0% |
| ! | CACATTATCTAGACTTTTGA+GGG | - | chr3_2:62406700-62406719 | Msa0415870:intron | 30.0% |
| ! | ACATTATCTAGACTTTTGAG+GGG | - | chr3_2:62406701-62406720 | Msa0415870:intron | 30.0% |
| ! | AATTCCATCGAAAAGGTTTT+TGG | + | chr3_2:62406770-62406789 | None:intergenic | 30.0% |
| TCTCTATAATTCCATCGAAA+AGG | + | chr3_2:62406777-62406796 | None:intergenic | 30.0% | |
| ! | CCGTTCAAATTTCAAACTTT+TGG | + | chr3_2:62406910-62406929 | None:intergenic | 30.0% |
| GTTTACACATGATTGGAATT+TGG | + | chr3_2:62407634-62407653 | None:intergenic | 30.0% | |
| ACCAACAATTGAGTATACAA+CGG | - | chr3_2:62408069-62408088 | Msa0415870:intron | 30.0% | |
| TATCCTCTTCTTAAAGAATC+TGG | - | chr3_2:62408154-62408173 | Msa0415870:intron | 30.0% | |
| ! | TTTCCAGATTCTTTAAGAAG+AGG | + | chr3_2:62404783-62404802 | None:intergenic | 30.0% |
| CTTCTTAAAGAATCTGGAAA+TGG | - | chr3_2:62404783-62404802 | Msa0415870:intron | 30.0% | |
| GTATGCTTAAACATGATTGA+TGG | - | chr3_2:62408283-62408302 | Msa0415870:intron | 30.0% | |
| TGAGCAAATGCTTAAATGAG+TGG | - | chr3_2:62403732-62403751 | Msa0415870:three_prime_UTR | 35.0% | |
| CTTAAATGAGTGGAAAGAGA+AGG | - | chr3_2:62403742-62403761 | Msa0415870:three_prime_UTR | 35.0% | |
| ! | GATGTTGAATTTTGCATAGC+TGG | - | chr3_2:62403925-62403944 | Msa0415870:CDS | 35.0% |
| AATCAATTTGTAGATGCTCG+TGG | - | chr3_2:62404009-62404028 | Msa0415870:CDS | 35.0% | |
| !!! | AGTTCACTTTTTGAGTGTGT+TGG | - | chr3_2:62404209-62404228 | Msa0415870:intron | 35.0% |
| AAATCAAGTGCGTGTAAGAT+TGG | + | chr3_2:62404455-62404474 | None:intergenic | 35.0% | |
| TACCAGAAACAAGACGAAAA+AGG | + | chr3_2:62404584-62404603 | None:intergenic | 35.0% | |
| AGCTATTAGGTAAACAATGC+TGG | - | chr3_2:62404654-62404673 | Msa0415870:CDS | 35.0% | |
| CATCCTCTTCTTAAAGAATC+TGG | - | chr3_2:62404777-62404796 | Msa0415870:intron | 35.0% | |
| CAAAAAGTCTTGCTTGTGAA+TGG | - | chr3_2:62404996-62405015 | Msa0415870:intron | 35.0% | |
| GTATTATTGAATCGCAACGT+AGG | + | chr3_2:62405181-62405200 | None:intergenic | 35.0% | |
| !! | TAAAATGCAGAGGCATCATA+TGG | + | chr3_2:62405360-62405379 | None:intergenic | 35.0% |
| CTGAACATAACATTGCCATT+TGG | + | chr3_2:62405446-62405465 | None:intergenic | 35.0% | |
| GTTTCTGCTATACGCTTTAT+CGG | + | chr3_2:62405548-62405567 | None:intergenic | 35.0% | |
| TAAATGGTAAAATGAGAGCC+AGG | + | chr3_2:62405743-62405762 | None:intergenic | 35.0% | |
| ! | GAACTTTGACTTATCTAGGA+AGG | - | chr3_2:62405800-62405819 | Msa0415870:intron | 35.0% |
| !! | GTTCATTAACTTGTGTCCTA+AGG | + | chr3_2:62405928-62405947 | None:intergenic | 35.0% |
| TTCATTAACTTATGCCCCAA+GGG | - | chr3_2:62406049-62406068 | Msa0415870:intron | 35.0% | |
| !! | AAATGTTAACTTGTGCCCTT+GGG | + | chr3_2:62406067-62406086 | None:intergenic | 35.0% |
| ! | AGAGGAGCATAATGATTAGT+AGG | - | chr3_2:62406203-62406222 | Msa0415870:intron | 35.0% |
| GAGCATAATGATTAGTAGGT+AGG | - | chr3_2:62406207-62406226 | Msa0415870:intron | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr3_2:62406340-62406359 | None:intergenic | 35.0% | |
| !! | AGTTTTATCAGGAACTTGGT+TGG | + | chr3_2:62406624-62406643 | None:intergenic | 35.0% |
| !! | CATTATCTAGACTTTTGAGG+GGG | - | chr3_2:62406702-62406721 | Msa0415870:intron | 35.0% |
| !! | ATTATCTAGACTTTTGAGGG+GGG | - | chr3_2:62406703-62406722 | Msa0415870:intron | 35.0% |
| CAAAAAACAACCCTGGAATA+GGG | - | chr3_2:62406730-62406749 | Msa0415870:intron | 35.0% | |
| GAGAGTAGATTTGACAAAGA+AGG | - | chr3_2:62406793-62406812 | Msa0415870:intron | 35.0% | |
| !! | AAGGAAACAAAGGTTTTTGG+TGG | + | chr3_2:62406820-62406839 | None:intergenic | 35.0% |
| TTGCCTAGCTAAAAAAACTG+TGG | - | chr3_2:62406883-62406902 | Msa0415870:intron | 35.0% | |
| ACAAAACACATACACGTTCT+CGG | - | chr3_2:62407096-62407115 | Msa0415870:intron | 35.0% | |
| CTATAGTGTACACTTGTTCT+AGG | - | chr3_2:62407273-62407292 | Msa0415870:intron | 35.0% | |
| ! | GAGAAAGGTTTTTCTGTTCA+TGG | - | chr3_2:62407335-62407354 | Msa0415870:intron | 35.0% |
| ! | AAGGTGGCTTCTGATTTTAA+TGG | - | chr3_2:62407407-62407426 | Msa0415870:intron | 35.0% |
| ATGACTCGTTTACACATGAT+TGG | + | chr3_2:62407641-62407660 | None:intergenic | 35.0% | |
| GACATGAATAAGTGGAAATC+CGG | + | chr3_2:62407741-62407760 | None:intergenic | 35.0% | |
| ! | CTTTTGATGCACTTTGTCTT+TGG | - | chr3_2:62407808-62407827 | Msa0415870:intron | 35.0% |
| TGAGCTTAGGTAAACAATGT+TGG | - | chr3_2:62408031-62408050 | Msa0415870:intron | 35.0% | |
| ACAATGTTGGAACAAATGTG+AGG | - | chr3_2:62408044-62408063 | Msa0415870:intron | 35.0% | |
| TCCGTTGTATACTCAATTGT+TGG | + | chr3_2:62408073-62408092 | None:intergenic | 35.0% | |
| TAAGAAGAGGATATGTCAGT+TGG | + | chr3_2:62408147-62408166 | None:intergenic | 35.0% | |
| AATGGGCAGAAGACAATATA+AGG | - | chr3_2:62408400-62408419 | Msa0415870:intron | 35.0% | |
| !! | AAATGATAAGGGCTCTGAAT+GGG | + | chr3_2:62408501-62408520 | None:intergenic | 35.0% |
| !! | AAAATGATAAGGGCTCTGAA+TGG | + | chr3_2:62408502-62408521 | None:intergenic | 35.0% |
| TATCTCGAACACCGATAAAA+CGG | - | chr3_2:62408680-62408699 | Msa0415870:intron | 35.0% | |
| ! | GTTTCTGCTATCCGTTTTAT+CGG | + | chr3_2:62408694-62408713 | None:intergenic | 35.0% |
| !! | GGACAAGTTATTTCTGTTGA+TGG | - | chr3_2:62408772-62408791 | Msa0415870:intron | 35.0% |
| !! | CAAGTTATTTCTGTTGATGG+AGG | - | chr3_2:62408775-62408794 | Msa0415870:intron | 35.0% |
| TATGATGAGATGCTTGATGA+AGG | - | chr3_2:62409018-62409037 | Msa0415870:intron | 35.0% | |
| ATCTTCTCCTTCTCAAAGAG+AGG | - | chr3_2:62403796-62403815 | Msa0415870:three_prime_UTR | 40.0% | |
| ! | ATAAGCTCCTCTCTTTGAGA+AGG | + | chr3_2:62403806-62403825 | None:intergenic | 40.0% |
| CAAGTTGCTTCTGCTTTCAA+CGG | - | chr3_2:62403830-62403849 | Msa0415870:three_prime_UTR | 40.0% | |
| ATGCTCGTGGAAAACTTAGT+TGG | - | chr3_2:62404022-62404041 | Msa0415870:CDS | 40.0% | |
| !! | ACACGCACTTGATTTTCAAG+TGG | - | chr3_2:62404460-62404479 | Msa0415870:intron | 40.0% |
| !!! | CACCTTTTTCGTCTTGTTTC+TGG | - | chr3_2:62404579-62404598 | Msa0415870:CDS | 40.0% |
| ACAATGCTGGTACAAATGTG+AGG | - | chr3_2:62404667-62404686 | Msa0415870:CDS | 40.0% | |
| TCGGCTGTATACTCAATTGT+TGG | + | chr3_2:62404696-62404715 | None:intergenic | 40.0% | |
| TGCATTCCATCTATGTCAAC+TGG | - | chr3_2:62404752-62404771 | Msa0415870:intron | 40.0% | |
| AGCATCTATGCAGTGAGTAA+AGG | - | chr3_2:62404858-62404877 | Msa0415870:intron | 40.0% | |
| TGCAGTGAGTAAAGGTAACT+TGG | - | chr3_2:62404866-62404885 | Msa0415870:intron | 40.0% | |
| ! | AGCGACGTTTTTGTATACCA+GGG | + | chr3_2:62405055-62405074 | None:intergenic | 40.0% |
| ! | AAGCGACGTTTTTGTATACC+AGG | + | chr3_2:62405056-62405075 | None:intergenic | 40.0% |
| GTATACAAAAACGTCGCTTG+TGG | - | chr3_2:62405057-62405076 | Msa0415870:intron | 40.0% | |
| AAAATGACAAGGCCAGAGAA+TGG | + | chr3_2:62405116-62405135 | None:intergenic | 40.0% | |
| ATGCATACGAAACACGATCA+TGG | - | chr3_2:62405227-62405246 | Msa0415870:intron | 40.0% | |
| TGCATACGAAACACGATCAT+GGG | - | chr3_2:62405228-62405247 | Msa0415870:intron | 40.0% | |
| TGATTTCGGTTGCATGAATC+AGG | + | chr3_2:62405277-62405296 | None:intergenic | 40.0% | |
| AACAGTTTGTCCAGTGATGT+AGG | + | chr3_2:62405618-62405637 | None:intergenic | 40.0% | |
| !! | GGACAAACTGTTTCTGTTGA+TGG | - | chr3_2:62405626-62405645 | Msa0415870:five_prime_UTR | 40.0% |
| !! | CAAACTGTTTCTGTTGATGG+AGG | - | chr3_2:62405629-62405648 | Msa0415870:five_prime_UTR | 40.0% |
| GATGGAGGATTTACTGTGAA+TGG | - | chr3_2:62405644-62405663 | Msa0415870:five_prime_UTR | 40.0% | |
| TAGAGGGTCTGTCAAAAACA+AGG | - | chr3_2:62405716-62405735 | Msa0415870:intron | 40.0% | |
| AGAGGGTCTGTCAAAAACAA+GGG | - | chr3_2:62405717-62405736 | Msa0415870:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | chr3_2:62405909-62405928 | Msa0415870:intron | 40.0% |
| GTTCATTAACTTATGCCCCA+AGG | - | chr3_2:62406048-62406067 | Msa0415870:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | + | chr3_2:62406066-62406085 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | + | chr3_2:62406068-62406087 | None:intergenic | 40.0% |
| GTAAATGGGTCAGATATTCC+AGG | - | chr3_2:62406509-62406528 | Msa0415870:intron | 40.0% | |
| TTTATCAGGAACTTGGTTGG+TGG | + | chr3_2:62406621-62406640 | None:intergenic | 40.0% | |
| !! | TGGGAGTTTTATCAGGAACT+TGG | + | chr3_2:62406628-62406647 | None:intergenic | 40.0% |
| !! | TTATCTAGACTTTTGAGGGG+GGG | - | chr3_2:62406704-62406723 | Msa0415870:intron | 40.0% |
| !!! | CCTATTCCAGGGTTGTTTTT+TGG | + | chr3_2:62406732-62406751 | None:intergenic | 40.0% |
| CCAAAAAACAACCCTGGAAT+AGG | - | chr3_2:62406729-62406748 | Msa0415870:intron | 40.0% | |
| ! | ACCACCAAAAACCTTTTCGA+TGG | - | chr3_2:62406763-62406782 | Msa0415870:intron | 40.0% |
| !! | TCCATCGAAAAGGTTTTTGG+TGG | + | chr3_2:62406767-62406786 | None:intergenic | 40.0% |
| GCTGGAGATAAAGGAAACAA+AGG | + | chr3_2:62406830-62406849 | None:intergenic | 40.0% | |
| TTGTTTCCTTTATCTCCAGC+AGG | - | chr3_2:62406830-62406849 | Msa0415870:intron | 40.0% | |
| TCAAATCCTGCTGGAGATAA+AGG | + | chr3_2:62406839-62406858 | None:intergenic | 40.0% | |
| TTATCTCCAGCAGGATTTGA+AGG | - | chr3_2:62406839-62406858 | Msa0415870:intron | 40.0% | |
| !!! | GGACCACAGTTTTTTTAGCT+AGG | + | chr3_2:62406889-62406908 | None:intergenic | 40.0% |
| ! | GAGAACGTGTATGTGTTTTG+TGG | + | chr3_2:62407097-62407116 | None:intergenic | 40.0% |
| !! | TTCTCGGTGTTAGCAAGATA+AGG | - | chr3_2:62407112-62407131 | Msa0415870:intron | 40.0% |
| ACTGTAGCAGAAACTCAAGA+TGG | - | chr3_2:62407165-62407184 | Msa0415870:intron | 40.0% | |
| !! | CACTTGTTCTAGGAATGAAG+AGG | - | chr3_2:62407283-62407302 | Msa0415870:intron | 40.0% |
| TGAATGAACGCTTGAATGAG+TGG | - | chr3_2:62407309-62407328 | Msa0415870:intron | 40.0% | |
| TTGAATGAGTGGAAGGAGAA+AGG | - | chr3_2:62407320-62407339 | Msa0415870:intron | 40.0% | |
| GACTTCTTCTTCTCAAAGAG+AGG | - | chr3_2:62407373-62407392 | Msa0415870:intron | 40.0% | |
| TGCGACAAGACATGAATAAG+TGG | + | chr3_2:62407749-62407768 | None:intergenic | 40.0% | |
| !! | TCGCATTTTCAAGCTTCTGA+GGG | + | chr3_2:62407867-62407886 | None:intergenic | 40.0% |
| !! | ATCGCATTTTCAAGCTTCTG+AGG | + | chr3_2:62407868-62407887 | None:intergenic | 40.0% |
| GATATGTCAGTTGGCATAGA+TGG | + | chr3_2:62408138-62408157 | None:intergenic | 40.0% | |
| GCAATCAATCAGCTGAACAA+AGG | - | chr3_2:62408366-62408385 | Msa0415870:intron | 40.0% | |
| ACAAAGGTCTTGCTTGTGAA+TGG | - | chr3_2:62408382-62408401 | Msa0415870:intron | 40.0% | |
| CAAAGGTCTTGCTTGTGAAT+GGG | - | chr3_2:62408383-62408402 | Msa0415870:intron | 40.0% | |
| !! | AGCGGTGTTTTTGTATACCA+AGG | + | chr3_2:62408441-62408460 | None:intergenic | 40.0% |
| !! | GGCTCTGAATGGGTAATTAA+AGG | + | chr3_2:62408491-62408510 | None:intergenic | 40.0% |
| ! | AACACATGAAGTGTCTTCCT+TGG | - | chr3_2:62408711-62408730 | Msa0415870:intron | 40.0% |
| TCACTTCTTATGGTCATGCT+GGG | + | chr3_2:62408823-62408842 | None:intergenic | 40.0% | |
| ATCACTTCTTATGGTCATGC+TGG | + | chr3_2:62408824-62408843 | None:intergenic | 40.0% | |
| TGATGATTGACATGGAGACA+CGG | + | chr3_2:62408983-62409002 | None:intergenic | 40.0% | |
| TCTCCATGTCAATCATCAGA+AGG | - | chr3_2:62408985-62409004 | Msa0415870:intron | 40.0% | |
| AGACCTTCTGATGATTGACA+TGG | + | chr3_2:62408991-62409010 | None:intergenic | 40.0% | |
| GAGAGCTTGTCACTATGCTA+AGG | - | chr3_2:62404376-62404395 | Msa0415870:CDS | 45.0% | |
| GATGTGCCAGTTGACATAGA+TGG | + | chr3_2:62404761-62404780 | None:intergenic | 45.0% | |
| GCTTATCAGAGATGCAACAG+AGG | + | chr3_2:62404826-62404845 | None:intergenic | 45.0% | |
| GTTGCATCTCTGATAAGCGT+AGG | - | chr3_2:62404828-62404847 | Msa0415870:intron | 45.0% | |
| TCTCTGATAAGCGTAGGTAC+CGG | - | chr3_2:62404834-62404853 | Msa0415870:intron | 45.0% | |
| ACTCACTGCATAGATGCTTC+CGG | + | chr3_2:62404856-62404875 | None:intergenic | 45.0% | |
| AAAAACGTCGCTTGTGGAAC+AGG | - | chr3_2:62405063-62405082 | Msa0415870:intron | 45.0% | |
| !! | AATGCAGAGGCATCATATGG+TGG | + | chr3_2:62405357-62405376 | None:intergenic | 45.0% |
| AGATGCTCACACTGACACTA+CGG | + | chr3_2:62405412-62405431 | None:intergenic | 45.0% | |
| ! | AACACATGAAGTGTCTGCCT+TGG | - | chr3_2:62405565-62405584 | Msa0415870:CDS | 45.0% |
| CAGACAAAGGAAAGTCACCA+AGG | + | chr3_2:62405585-62405604 | None:intergenic | 45.0% | |
| GAGACATCATTTGCGAGTCA+TGG | + | chr3_2:62406267-62406286 | None:intergenic | 45.0% | |
| ! | CAAACTGGCTCAGATATTCC+GGG | + | chr3_2:62406325-62406344 | None:intergenic | 45.0% |
| ! | CCAAACTGGCTCAGATATTC+CGG | + | chr3_2:62406326-62406345 | None:intergenic | 45.0% |
| ATGGGTCAGATATTCCAGGA+TGG | - | chr3_2:62406513-62406532 | Msa0415870:intron | 45.0% | |
| GTCAGATATTCCAGGATGGA+GGG | - | chr3_2:62406517-62406536 | Msa0415870:intron | 45.0% | |
| ! | GTTGGATCACTCGTTTTGCA+GGG | + | chr3_2:62406599-62406618 | None:intergenic | 45.0% |
| !!! | CGAGCTTTGGGAGTTTTATC+AGG | + | chr3_2:62406635-62406654 | None:intergenic | 45.0% |
| ACCATGGTAGATCGAGCTTT+GGG | + | chr3_2:62406647-62406666 | None:intergenic | 45.0% | |
| AACCATGGTAGATCGAGCTT+TGG | + | chr3_2:62406648-62406667 | None:intergenic | 45.0% | |
| ! | GGTAGTTCGATTGGTAACCA+TGG | + | chr3_2:62406663-62406682 | None:intergenic | 45.0% |
| AACAACCCTGGAATAGGGAT+AGG | - | chr3_2:62406735-62406754 | Msa0415870:intron | 45.0% | |
| CTTCTCCTATCCCTATTCCA+GGG | + | chr3_2:62406743-62406762 | None:intergenic | 45.0% | |
| TCTTCTCCTATCCCTATTCC+AGG | + | chr3_2:62406744-62406763 | None:intergenic | 45.0% | |
| TGTGAACCTTCAAATCCTGC+TGG | + | chr3_2:62406848-62406867 | None:intergenic | 45.0% | |
| AAACTCAAGATGGTCCCTCA+AGG | - | chr3_2:62407175-62407194 | Msa0415870:intron | 45.0% | |
| AACTCAAGATGGTCCCTCAA+GGG | - | chr3_2:62407176-62407195 | Msa0415870:intron | 45.0% | |
| !! | GTAGAGGAACTTGCTGAGTT+TGG | - | chr3_2:62407248-62407267 | Msa0415870:intron | 45.0% |
| TGAACGCTTGAATGAGTGGA+AGG | - | chr3_2:62407313-62407332 | Msa0415870:intron | 45.0% | |
| ! | AAGAGAGGAGCTTGTTCGAA+AGG | - | chr3_2:62407388-62407407 | Msa0415870:intron | 45.0% |
| GTTTGTCAGAGATGCAACAG+AGG | + | chr3_2:62408203-62408222 | None:intergenic | 45.0% | |
| GTTGCATCTCTGACAAACGT+AGG | - | chr3_2:62408205-62408224 | Msa0415870:intron | 45.0% | |
| TCTCTGACAAACGTAGGTTC+TGG | - | chr3_2:62408211-62408230 | Msa0415870:intron | 45.0% | |
| ACCATATACGCAGCGTGTAA+AGG | - | chr3_2:62408235-62408254 | Msa0415870:intron | 45.0% | |
| ACCTTTACACGCTGCGTATA+TGG | + | chr3_2:62408239-62408258 | None:intergenic | 45.0% | |
| TGCAGCTGAAGAAAACAGCA+CGG | + | chr3_2:62408349-62408368 | None:intergenic | 45.0% | |
| ! | ACATGAAGTGTCTTCCTTGG+TGG | - | chr3_2:62408714-62408733 | Msa0415870:intron | 45.0% |
| GATGGAGGATTTACTGCGAA+TGG | - | chr3_2:62408790-62408809 | Msa0415870:intron | 45.0% | |
| GATGATTGACATGGAGACAC+GGG | + | chr3_2:62408982-62409001 | None:intergenic | 45.0% | |
| TCACTGTGTGTGTGTGTGTG+AGG | + | chr3_2:62404358-62404377 | None:intergenic | 50.0% | |
| AGTGCGTGTAAGATTGGCGA+CGG | + | chr3_2:62404449-62404468 | None:intergenic | 50.0% | |
| GTCTGTCAAAAACAAGGGCC+TGG | - | chr3_2:62405722-62405741 | Msa0415870:intron | 50.0% | |
| CTCGCAAATGATGTCTCCCT+CGG | - | chr3_2:62406298-62406317 | Msa0415870:intron | 50.0% | |
| CCGGAATATCTGAGCCAGTT+TGG | - | chr3_2:62406323-62406342 | Msa0415870:intron | 50.0% | |
| GGTCAGATATTCCAGGATGG+AGG | - | chr3_2:62406516-62406535 | Msa0415870:intron | 50.0% | |
| ! | GGTTGGATCACTCGTTTTGC+AGG | + | chr3_2:62406600-62406619 | None:intergenic | 50.0% |
| !! | TCAGGAACTTGGTTGGTGGT+TGG | + | chr3_2:62406617-62406636 | None:intergenic | 50.0% |
| TCCCAAAGCTCGATCTACCA+TGG | - | chr3_2:62406643-62406662 | Msa0415870:intron | 50.0% | |
| GAGAGCTGTGAATCCCTTGA+GGG | + | chr3_2:62407192-62407211 | None:intergenic | 50.0% | |
| GATCGGTCATGCTATCGTAG+AGG | - | chr3_2:62407232-62407251 | Msa0415870:intron | 50.0% | |
| ! | AGAGGAGCTTGTTCGAAAGG+TGG | - | chr3_2:62407391-62407410 | Msa0415870:intron | 50.0% |
| TGAGCTGAAGTCATGCGTGA+CGG | + | chr3_2:62407974-62407993 | None:intergenic | 50.0% | |
| CAGACAAAGGAAAGCCACCA+AGG | + | chr3_2:62408731-62408750 | None:intergenic | 50.0% | |
| AAGAAGCAGCTGGCAGACAA+AGG | + | chr3_2:62408744-62408763 | None:intergenic | 50.0% | |
| CCAGTGATGTAAGAAGCAGC+TGG | + | chr3_2:62408754-62408773 | None:intergenic | 50.0% | |
| CCAGCTGCTTCTTACATCAC+TGG | - | chr3_2:62408751-62408770 | Msa0415870:intron | 50.0% | |
| CTGCTTACTCCACCTAGCGA+GGG | - | chr3_2:62404410-62404429 | Msa0415870:intron | 55.0% | |
| GAAACACGATCATGGGCTCG+TGG | - | chr3_2:62405235-62405254 | Msa0415870:intron | 55.0% | |
| AGGAAGCAGCTGGCAGACAA+AGG | + | chr3_2:62405598-62405617 | None:intergenic | 55.0% | |
| CCAGTGATGTAGGAAGCAGC+TGG | + | chr3_2:62405608-62405627 | None:intergenic | 55.0% | |
| CCAGCTGCTTCCTACATCAC+TGG | - | chr3_2:62405605-62405624 | Msa0415870:exon | 55.0% | |
| AATGATGTCTCCCTCGGTCC+CGG | - | chr3_2:62406304-62406323 | Msa0415870:intron | 55.0% | |
| CTCAGATATTCCGGGACCGA+GGG | + | chr3_2:62406317-62406336 | None:intergenic | 55.0% | |
| GTTTCGTACTCCCTCCATCC+TGG | + | chr3_2:62406530-62406549 | None:intergenic | 55.0% | |
| ! | GGGGTGCCAAAAAACAACCC+TGG | - | chr3_2:62406723-62406742 | Msa0415870:intron | 55.0% |
| CGAGAGCTGTGAATCCCTTG+AGG | + | chr3_2:62407193-62407212 | None:intergenic | 55.0% | |
| GGATTCACAGCTCTCGTCAC+CGG | - | chr3_2:62407197-62407216 | Msa0415870:intron | 55.0% | |
| ! | AGGGACTAGGGTTCTAACGC+CGG | - | chr3_2:62407719-62407738 | Msa0415870:intron | 55.0% |
| GCTGCTTACTCCACCTAGCG+AGG | - | chr3_2:62404409-62404428 | Msa0415870:intron | 60.0% | |
| ! | CTAGCGAGGGCCTTGTGCAT+GGG | - | chr3_2:62404423-62404442 | Msa0415870:intron | 60.0% |
| GGTGCAACTGTGTTGCACCC+TGG | - | chr3_2:62405035-62405054 | Msa0415870:intron | 60.0% | |
| TCATGGGCTCGTGGCTCATC+TGG | - | chr3_2:62405244-62405263 | Msa0415870:intron | 60.0% | |
| GCTCAGATATTCCGGGACCG+AGG | + | chr3_2:62406318-62406337 | None:intergenic | 60.0% | |
| TTCACAGCTCTCGTCACCGG+CGG | - | chr3_2:62407200-62407219 | Msa0415870:intron | 60.0% | |
| GGATCAACTGCGTTGCGCCT+TGG | - | chr3_2:62408421-62408440 | Msa0415870:intron | 60.0% | |
| TGCACAAGGCCCTCGCTAGG+TGG | + | chr3_2:62404422-62404441 | None:intergenic | 65.0% | |
| CCATGCACAAGGCCCTCGCT+AGG | + | chr3_2:62404425-62404444 | None:intergenic | 65.0% | |
| ! | CCTAGCGAGGGCCTTGTGCA+TGG | - | chr3_2:62404422-62404441 | Msa0415870:intron | 65.0% |
| TTGGCGACGGCCCATGCACA+AGG | + | chr3_2:62404436-62404455 | None:intergenic | 65.0% | |
| TCGTCACCGGCGGAACTCGT+GGG | - | chr3_2:62407210-62407229 | Msa0415870:intron | 65.0% | |
| ACCGGCGGAACTCGTGGGAT+CGG | - | chr3_2:62407215-62407234 | Msa0415870:intron | 65.0% | |
| ACCGATCCCACGAGTTCCGC+CGG | + | chr3_2:62407219-62407238 | None:intergenic | 65.0% | |
| CTCGTCACCGGCGGAACTCG+TGG | - | chr3_2:62407209-62407228 | Msa0415870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 62403708 | 62409058 | 62403708 | ID=Msa0415870;Name=Msa0415870 |
| chr3_2 | mRNA | 62403708 | 62409058 | 62403708 | ID=Msa0415870-mRNA-1;Parent=Msa0415870;Name=Msa0415870-mRNA-1;_AED=0.39;_eAED=0.39;_QI=81|1|1|1|0.75|0.6|5|212|273 |
| chr3_2 | exon | 62403708 | 62404120 | 62403708 | ID=Msa0415870-mRNA-1:exon:13458;Parent=Msa0415870-mRNA-1 |
| chr3_2 | exon | 62404296 | 62404402 | 62404296 | ID=Msa0415870-mRNA-1:exon:13457;Parent=Msa0415870-mRNA-1 |
| chr3_2 | exon | 62404510 | 62404726 | 62404510 | ID=Msa0415870-mRNA-1:exon:13456;Parent=Msa0415870-mRNA-1 |
| chr3_2 | exon | 62405321 | 62405675 | 62405321 | ID=Msa0415870-mRNA-1:exon:13455;Parent=Msa0415870-mRNA-1 |
| chr3_2 | exon | 62409036 | 62409058 | 62409036 | ID=Msa0415870-mRNA-1:exon:13454;Parent=Msa0415870-mRNA-1 |
| chr3_2 | five_prime_UTR | 62409036 | 62409058 | 62409036 | ID=Msa0415870-mRNA-1:five_prime_utr;Parent=Msa0415870-mRNA-1 |
| chr3_2 | five_prime_UTR | 62405618 | 62405675 | 62405618 | ID=Msa0415870-mRNA-1:five_prime_utr;Parent=Msa0415870-mRNA-1 |
| chr3_2 | CDS | 62405321 | 62405617 | 62405321 | ID=Msa0415870-mRNA-1:cds;Parent=Msa0415870-mRNA-1 |
| chr3_2 | CDS | 62404510 | 62404726 | 62404510 | ID=Msa0415870-mRNA-1:cds;Parent=Msa0415870-mRNA-1 |
| chr3_2 | CDS | 62404296 | 62404402 | 62404296 | ID=Msa0415870-mRNA-1:cds;Parent=Msa0415870-mRNA-1 |
| chr3_2 | CDS | 62403920 | 62404120 | 62403920 | ID=Msa0415870-mRNA-1:cds;Parent=Msa0415870-mRNA-1 |
| chr3_2 | three_prime_UTR | 62403708 | 62403919 | 62403708 | ID=Msa0415870-mRNA-1:three_prime_utr;Parent=Msa0415870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
