Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216360 | XP_013458162.1 | 82.732 | 527 | 56 | 9 | 32 | 544 | 7 | 512 | 2.96e-133 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216360 | sp|Q9M8K5|HIP32_ARATH | 53.232 | 263 | 104 | 5 | 33 | 295 | 8 | 251 | 4.17e-38 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0081520 | Msa1216360 | 0.804989 | 1.657755e-49 | -8.615850e-47 |
| Msa0651550 | Msa1216360 | 0.832421 | 9.545586e-56 | -8.615850e-47 |
| Msa0652650 | Msa1216360 | 0.818783 | 1.637315e-52 | -8.615850e-47 |
| Msa0660370 | Msa1216360 | 0.808672 | 2.761174e-50 | -8.615850e-47 |
| Msa0725440 | Msa1216360 | 0.803008 | 4.279431e-49 | -8.615850e-47 |
| Msa0829300 | Msa1216360 | 0.802595 | 5.206604e-49 | -8.615850e-47 |
| Msa0829330 | Msa1216360 | 0.814089 | 1.839807e-51 | -8.615850e-47 |
| Msa0196190 | Msa1216360 | 0.815114 | 1.091326e-51 | -8.615850e-47 |
| Msa0231200 | Msa1216360 | 0.831086 | 2.037914e-55 | -8.615850e-47 |
| Msa0238090 | Msa1216360 | 0.808648 | 2.793251e-50 | -8.615850e-47 |
| Msa0415870 | Msa1216360 | 0.807097 | 5.970736e-50 | -8.615850e-47 |
| Msa0426530 | Msa1216360 | 0.815619 | 8.424041e-52 | -8.615850e-47 |
| Msa1011530 | Msa1216360 | 0.812561 | 3.984646e-51 | -8.615850e-47 |
| Msa1021590 | Msa1216360 | 0.802116 | 6.535120e-49 | -8.615850e-47 |
| Msa1034600 | Msa1216360 | 0.820796 | 5.676767e-53 | -8.615850e-47 |
| Msa1042160 | Msa1216360 | 0.819016 | 1.448986e-52 | -8.615850e-47 |
| Msa1042190 | Msa1216360 | 0.812630 | 3.849820e-51 | -8.615850e-47 |
| Msa1044680 | Msa1216360 | 0.825197 | 5.344489e-54 | -8.615850e-47 |
| Msa1074370 | Msa1216360 | 0.839973 | 1.150196e-57 | -8.615850e-47 |
| Msa1085930 | Msa1216360 | 0.818878 | 1.557409e-52 | -8.615850e-47 |
| Msa1105640 | Msa1216360 | 0.813701 | 2.240796e-51 | -8.615850e-47 |
| Msa0249860 | Msa1216360 | 0.809205 | 2.123022e-50 | -8.615850e-47 |
| Msa0270120 | Msa1216360 | 0.839502 | 1.525151e-57 | -8.615850e-47 |
| Msa0275080 | Msa1216360 | 0.879344 | 1.345267e-69 | -8.615850e-47 |
| Msa0315980 | Msa1216360 | 0.893083 | 8.741845e-75 | -8.615850e-47 |
| Msa0323270 | Msa1216360 | 0.832767 | 7.834047e-56 | -8.615850e-47 |
| Msa1148960 | Msa1216360 | 0.806562 | 7.744992e-50 | -8.615850e-47 |
| Msa1167470 | Msa1216360 | 0.811667 | 6.243672e-51 | -8.615850e-47 |
| Msa1216090 | Msa1216360 | 0.818635 | 1.768663e-52 | -8.615850e-47 |
| Msa1216110 | Msa1216360 | 0.871482 | 6.608482e-67 | -8.615850e-47 |
| Msa1216340 | Msa1216360 | 0.850542 | 1.587942e-60 | -8.615850e-47 |
| Msa1216360 | Msa1263010 | 0.901207 | 3.384639e-78 | -8.615850e-47 |
| Msa1216360 | Msa1375280 | 0.805440 | 1.333760e-49 | -8.615850e-47 |
| Msa1216360 | Msa1393780 | 0.807207 | 5.656775e-50 | -8.615850e-47 |
| Msa1216360 | Msa1429930 | 0.804265 | 2.347464e-49 | -8.615850e-47 |
| Msa0517250 | Msa1216360 | 0.831752 | 1.397047e-55 | -8.615850e-47 |
| Msa0587620 | Msa1216360 | 0.809562 | 1.779612e-50 | -8.615850e-47 |
| Msa0591170 | Msa1216360 | 0.802210 | 6.250144e-49 | -8.615850e-47 |
| Msa0877840 | Msa1216360 | 0.808138 | 3.587738e-50 | -8.615850e-47 |
| Msa0880270 | Msa1216360 | 0.805314 | 1.416907e-49 | -8.615850e-47 |
| Msa0945260 | Msa1216360 | 0.817034 | 4.064877e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216360 | MtrunA17_Chr4g0065651 | 82.732 | 527 | 56 | 9 | 32 | 544 | 7 | 512 | 2.73e-137 | 407 |
| Msa1216360 | MtrunA17_Chr0c22g0493881 | 81.432 | 377 | 46 | 6 | 32 | 401 | 7 | 366 | 2.96e-86 | 271 |
| Msa1216360 | MtrunA17_Chr4g0065621 | 84.266 | 286 | 27 | 4 | 32 | 312 | 7 | 279 | 1.01e-81 | 259 |
| Msa1216360 | MtrunA17_Chr2g0287751 | 52.670 | 543 | 172 | 21 | 32 | 544 | 7 | 494 | 2.75e-69 | 231 |
| Msa1216360 | MtrunA17_Chr2g0287741 | 48.614 | 541 | 185 | 23 | 30 | 544 | 10 | 483 | 1.15e-48 | 177 |
| Msa1216360 | MtrunA17_Chr4g0065611 | 86.466 | 133 | 13 | 2 | 415 | 544 | 12 | 142 | 2.05e-39 | 140 |
| Msa1216360 | MtrunA17_Chr0c22g0493871 | 87.121 | 132 | 12 | 2 | 416 | 544 | 1 | 130 | 3.09e-39 | 139 |
| Msa1216360 | MtrunA17_Chr1g0191671 | 58.915 | 129 | 48 | 3 | 33 | 156 | 8 | 136 | 1.05e-28 | 120 |
| Msa1216360 | MtrunA17_Chr1g0208301 | 69.565 | 69 | 21 | 0 | 32 | 100 | 10 | 78 | 4.59e-26 | 109 |
| Msa1216360 | MtrunA17_Chr7g0269081 | 58.974 | 78 | 27 | 1 | 22 | 99 | 14 | 86 | 8.22e-23 | 99.0 |
| Msa1216360 | MtrunA17_Chr4g0067291 | 38.854 | 157 | 70 | 3 | 23 | 153 | 62 | 218 | 2.37e-22 | 98.6 |
| Msa1216360 | MtrunA17_Chr7g0272571 | 57.576 | 66 | 28 | 0 | 34 | 99 | 32 | 97 | 6.10e-19 | 88.6 |
| Msa1216360 | MtrunA17_Chr1g0192131 | 56.962 | 79 | 32 | 2 | 25 | 102 | 6 | 83 | 1.56e-18 | 87.8 |
| Msa1216360 | MtrunA17_Chr3g0111541 | 54.545 | 66 | 30 | 0 | 33 | 98 | 10 | 75 | 2.98e-18 | 83.6 |
| Msa1216360 | MtrunA17_Chr2g0296001 | 50.000 | 86 | 38 | 1 | 14 | 99 | 57 | 137 | 5.12e-16 | 79.7 |
| Msa1216360 | MtrunA17_Chr1g0198341 | 38.667 | 75 | 46 | 0 | 34 | 108 | 3 | 77 | 3.24e-13 | 65.1 |
| Msa1216360 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 39 | 99 | 33 | 93 | 1.20e-12 | 65.9 |
| Msa1216360 | MtrunA17_Chr1g0160201 | 45.902 | 61 | 33 | 0 | 39 | 99 | 29 | 89 | 2.38e-12 | 64.7 |
| Msa1216360 | MtrunA17_Chr2g0285561 | 49.275 | 69 | 34 | 1 | 37 | 104 | 10 | 78 | 2.61e-12 | 67.8 |
| Msa1216360 | MtrunA17_Chr7g0251491 | 34.286 | 105 | 61 | 4 | 27 | 123 | 39 | 143 | 4.93e-12 | 64.7 |
| Msa1216360 | MtrunA17_Chr2g0325601 | 42.254 | 71 | 41 | 0 | 39 | 109 | 6 | 76 | 5.95e-12 | 63.5 |
| Msa1216360 | MtrunA17_Chr3g0124411 | 50.820 | 61 | 30 | 0 | 39 | 99 | 34 | 94 | 9.21e-12 | 63.2 |
| Msa1216360 | MtrunA17_Chr7g0218981 | 36.471 | 85 | 54 | 0 | 34 | 118 | 3 | 87 | 1.12e-11 | 62.4 |
| Msa1216360 | MtrunA17_Chr4g0028461 | 48.276 | 87 | 43 | 2 | 37 | 121 | 68 | 154 | 1.21e-11 | 66.2 |
| Msa1216360 | MtrunA17_Chr1g0189221 | 40.909 | 66 | 39 | 0 | 39 | 104 | 57 | 122 | 3.63e-11 | 62.4 |
| Msa1216360 | MtrunA17_Chr5g0407821 | 38.462 | 78 | 47 | 1 | 29 | 105 | 16 | 93 | 5.27e-11 | 60.8 |
| Msa1216360 | MtrunA17_Chr6g0448861 | 38.356 | 73 | 43 | 2 | 29 | 99 | 23 | 95 | 6.61e-11 | 60.8 |
| Msa1216360 | MtrunA17_Chr5g0404641 | 43.284 | 67 | 38 | 0 | 35 | 101 | 3 | 69 | 8.76e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216360 | AT3G06130.2 | 53.232 | 263 | 104 | 5 | 33 | 295 | 8 | 251 | 2.67e-40 | 149 |
| Msa1216360 | AT3G06130.1 | 53.232 | 263 | 104 | 5 | 33 | 295 | 8 | 251 | 4.24e-39 | 149 |
| Msa1216360 | AT5G19090.2 | 74.468 | 94 | 24 | 0 | 33 | 126 | 8 | 101 | 3.67e-37 | 143 |
| Msa1216360 | AT5G19090.3 | 74.468 | 94 | 24 | 0 | 33 | 126 | 8 | 101 | 3.67e-37 | 143 |
| Msa1216360 | AT5G19090.5 | 74.468 | 94 | 24 | 0 | 33 | 126 | 8 | 101 | 1.63e-36 | 143 |
| Msa1216360 | AT5G19090.4 | 74.468 | 94 | 24 | 0 | 33 | 126 | 8 | 101 | 1.63e-36 | 143 |
| Msa1216360 | AT5G19090.1 | 74.468 | 94 | 24 | 0 | 33 | 126 | 8 | 101 | 1.63e-36 | 143 |
| Msa1216360 | AT5G27690.1 | 57.303 | 89 | 33 | 1 | 38 | 126 | 33 | 116 | 3.54e-25 | 107 |
| Msa1216360 | AT3G05220.1 | 64.706 | 68 | 24 | 0 | 32 | 99 | 7 | 74 | 1.58e-23 | 105 |
| Msa1216360 | AT1G23000.1 | 65.714 | 70 | 23 | 1 | 39 | 108 | 17 | 85 | 8.79e-23 | 100 |
| Msa1216360 | AT1G23000.2 | 65.714 | 70 | 23 | 1 | 39 | 108 | 77 | 145 | 2.06e-22 | 100 |
| Msa1216360 | AT5G37860.1 | 56.716 | 67 | 29 | 0 | 35 | 101 | 10 | 76 | 2.44e-19 | 88.6 |
| Msa1216360 | AT1G56210.1 | 56.000 | 75 | 32 | 1 | 35 | 108 | 40 | 114 | 5.40e-19 | 89.4 |
| Msa1216360 | AT1G06330.1 | 46.875 | 64 | 34 | 0 | 39 | 102 | 6 | 69 | 4.25e-13 | 67.4 |
| Msa1216360 | AT1G66240.1 | 39.130 | 69 | 42 | 0 | 31 | 99 | 29 | 97 | 4.42e-12 | 63.2 |
| Msa1216360 | AT3G56891.1 | 43.750 | 64 | 36 | 0 | 39 | 102 | 20 | 83 | 1.87e-11 | 63.2 |
| Msa1216360 | AT3G02960.1 | 43.284 | 67 | 37 | 1 | 35 | 100 | 126 | 192 | 8.22e-11 | 63.2 |
| Msa1216360 | AT4G23882.1 | 38.462 | 117 | 53 | 5 | 11 | 109 | 48 | 163 | 8.39e-11 | 63.5 |
Find 180 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATATGTGTTTATATTT+TGG | 0.061931 | 8_1:-78079358 | Msa1216360:three_prime_UTR |
| CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8_1:-78081044 | Msa1216360:CDS |
| CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8_1:-78080699 | Msa1216360:CDS |
| TACTATGTTAATTATGTTCT+TGG | 0.218147 | 8_1:-78079408 | Msa1216360:three_prime_UTR |
| TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8_1:+78080646 | None:intergenic |
| GGATTCCCCTGCATCATTTC+CGG | 0.253390 | 8_1:+78079877 | None:intergenic |
| TGCTGCTGCTGTTGTTGATA+TGG | 0.266573 | 8_1:+78079856 | None:intergenic |
| TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8_1:+78080838 | None:intergenic |
| CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8_1:+78080640 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8_1:-78080999 | Msa1216360:CDS |
| TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8_1:+78080627 | None:intergenic |
| CCCTGCATCATTTCCGGTCC+TGG | 0.305122 | 8_1:+78079883 | None:intergenic |
| ACAACAACAGCAACAGTTAA+TGG | 0.305860 | 8_1:-78079830 | Msa1216360:CDS |
| AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8_1:+78081011 | None:intergenic |
| TCAATCTCATCCTGGTAGTA+TGG | 0.312405 | 8_1:-78080028 | Msa1216360:CDS |
| TTGTATTTGTTGACCACCTT+TGG | 0.313268 | 8_1:+78080809 | None:intergenic |
| CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8_1:+78080465 | None:intergenic |
| TAAGGATCTGGAGGAGGATA+AGG | 0.339463 | 8_1:+78079691 | None:intergenic |
| GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8_1:+78080639 | None:intergenic |
| ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8_1:+78080922 | None:intergenic |
| GGCGGAGGTGGAGGCGGTGG+TGG | 0.350490 | 8_1:-78080108 | Msa1216360:CDS |
| GAAATCAATGTTATTGAGAA+TGG | 0.356396 | 8_1:-78079304 | Msa1216360:three_prime_UTR |
| GGGTGGTGGAGGAAATAATA+TGG | 0.357181 | 8_1:-78080007 | Msa1216360:CDS |
| ATAGATGCAGCTAAATTTCC+TGG | 0.359801 | 8_1:-78083154 | Msa1216360:CDS |
| TTCTATAAACTACTCCTCTA+TGG | 0.368659 | 8_1:+78079447 | None:intergenic |
| CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8_1:+78080594 | None:intergenic |
| GGTGGCGGAGGTGGAGGCGG+TGG | 0.373427 | 8_1:-78080111 | Msa1216360:CDS |
| TTCCCACCCATTCGGTTCAT+AGG | 0.376834 | 8_1:+78079970 | None:intergenic |
| TTCTGGCCCGGATGCTGATT+CGG | 0.380360 | 8_1:+78080663 | None:intergenic |
| TACTTTCAAGGTGGTGGTGG+TGG | 0.384334 | 8_1:-78079907 | Msa1216360:CDS |
| GAGAAATGAGCAACCAGAGC+TGG | 0.388714 | 8_1:+78079267 | None:intergenic |
| CCACCATAGCAGCACGTTGT+TGG | 0.393632 | 8_1:+78079791 | None:intergenic |
| AACAAGAATGGAGGGAATAA+TGG | 0.397922 | 8_1:-78080183 | Msa1216360:CDS |
| CATCAAACAAACAATGTTCA+TGG | 0.400654 | 8_1:-78079617 | Msa1216360:three_prime_UTR |
| CAGGGAAACATGCCGAGTTA+TGG | 0.402581 | 8_1:-78080980 | Msa1216360:CDS |
| CCAATTGGTGGCGGAGGTGG+AGG | 0.411942 | 8_1:-78080117 | Msa1216360:CDS |
| GGGAACATTCCTGCTGTTCA+AGG | 0.423278 | 8_1:-78079952 | Msa1216360:CDS |
| AATGTTCAGGCTATGAATAA+TGG | 0.423799 | 8_1:-78080084 | Msa1216360:CDS |
| GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8_1:+78081012 | None:intergenic |
| TGTATTTGTTGACCACCTTT+GGG | 0.427960 | 8_1:+78080810 | None:intergenic |
| AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8_1:-78081239 | Msa1216360:intron |
| ATGATGGGTGGTGGAGGTGG+TGG | 0.432564 | 8_1:-78080051 | Msa1216360:CDS |
| AAGAAAGGTGGTGGTGGTGG+TGG | 0.432913 | 8_1:-78080288 | Msa1216360:CDS |
| CCTGTGCCGGTTCAAATTCA+TGG | 0.435135 | 8_1:-78080339 | Msa1216360:CDS |
| AAAATGATGGGTGGTGGAGG+TGG | 0.436665 | 8_1:-78080054 | Msa1216360:CDS |
| CTCAAGCCTCAAGGCACAAA+TGG | 0.437527 | 8_1:-78083126 | Msa1216360:CDS |
| AGGCGGTGGTGGTAATGTTC+AGG | 0.438058 | 8_1:-78080097 | Msa1216360:CDS |
| TTCTGATTCGGGTTCTGGCC+CGG | 0.438392 | 8_1:+78080651 | None:intergenic |
| GGTTACTTTCAAGGTGGTGG+TGG | 0.439749 | 8_1:-78079910 | Msa1216360:CDS |
| CCTCCACCTCCGCCACCAAT+TGG | 0.440018 | 8_1:+78080117 | None:intergenic |
| TTCATGCCATGAATTTGAAC+CGG | 0.443413 | 8_1:+78080333 | None:intergenic |
| GGAAAGAAAGGTGGTGGTGG+TGG | 0.445640 | 8_1:-78080291 | Msa1216360:CDS |
| ACTATGTTAATTATGTTCTT+GGG | 0.449339 | 8_1:-78079407 | Msa1216360:three_prime_UTR |
| ATTGGTGGCGGAGGTGGAGG+CGG | 0.453929 | 8_1:-78080114 | Msa1216360:CDS |
| ATACCAATTGGTGGCGGAGG+TGG | 0.457299 | 8_1:-78080120 | Msa1216360:CDS |
| CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8_1:-78080465 | Msa1216360:CDS |
| TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8_1:-78080517 | Msa1216360:CDS |
| AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8_1:-78080725 | Msa1216360:CDS |
| CGGTTCATAGGCATACTCAT+TGG | 0.463995 | 8_1:+78079982 | None:intergenic |
| ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8_1:-78080412 | Msa1216360:CDS |
| AAGGATCTGGAGGAGGATAA+GGG | 0.466318 | 8_1:+78079692 | None:intergenic |
| GGTCTACCGGCAGGCGGAGG+AGG | 0.468185 | 8_1:-78079931 | Msa1216360:CDS |
| AAAGCATGTGAGTAAGGATC+TGG | 0.469198 | 8_1:+78079679 | None:intergenic |
| CATGGCATGAATGGTGGAAA+TGG | 0.469268 | 8_1:-78080321 | Msa1216360:CDS |
| TGGTGGTGGTGGTCCAGGAC+CGG | 0.469917 | 8_1:-78079896 | Msa1216360:CDS |
| GATGCCGCCGAATCAGCATC+CGG | 0.474547 | 8_1:-78080670 | Msa1216360:CDS |
| AAATCAATGTTATTGAGAAT+GGG | 0.477281 | 8_1:-78079303 | Msa1216360:three_prime_UTR |
| TCCAGGACCGGAAATGATGC+AGG | 0.480211 | 8_1:-78079884 | Msa1216360:CDS |
| GGCGGAGGAGGTTACTTTCA+AGG | 0.482444 | 8_1:-78079919 | Msa1216360:CDS |
| GGTGGAAACGGGCAGAAACC+TGG | 0.489239 | 8_1:-78080372 | Msa1216360:CDS |
| CAATCTCATCCTGGTAGTAT+GGG | 0.490190 | 8_1:-78080027 | Msa1216360:CDS |
| CAGGAATGTTCCCACCCATT+CGG | 0.492437 | 8_1:+78079962 | None:intergenic |
| TCGCTGAAAGCATGTGAGTA+AGG | 0.494235 | 8_1:+78079673 | None:intergenic |
| AAGGGTATGTCGATACCAAT+TGG | 0.495826 | 8_1:-78080132 | Msa1216360:CDS |
| ATGAAAGAAATTCCCAGCTC+TGG | 0.499167 | 8_1:-78079280 | Msa1216360:three_prime_UTR |
| TCCTGCTGTTCAAGGTCTAC+CGG | 0.501026 | 8_1:-78079944 | Msa1216360:CDS |
| GCCGGTAGACCTTGAACAGC+AGG | 0.503563 | 8_1:+78079943 | None:intergenic |
| GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8_1:+78079745 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8_1:+78079697 | None:intergenic |
| ATTGACAATGTCAAAGGTGG+TGG | 0.509050 | 8_1:-78080885 | Msa1216360:CDS |
| CATCCTGGTAGTATGGGTGG+TGG | 0.513520 | 8_1:-78080021 | Msa1216360:CDS |
| AATGGTGGTGGAAACAAGAA+TGG | 0.515647 | 8_1:-78080195 | Msa1216360:CDS |
| CCATGAATTTGAACCGGCAC+AGG | 0.516132 | 8_1:+78080339 | None:intergenic |
| GGAGGTTACTTTCAAGGTGG+TGG | 0.516276 | 8_1:-78079913 | Msa1216360:CDS |
| GGTGGTGGAGGAAATAATAT+GGG | 0.517548 | 8_1:-78080006 | Msa1216360:CDS |
| AAGTAACCTCCTCCGCCTGC+CGG | 0.520732 | 8_1:+78079925 | None:intergenic |
| GTAGTAATCAAAATAACGAT+GGG | 0.520911 | 8_1:-78080161 | Msa1216360:CDS |
| CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8_1:-78080633 | Msa1216360:CDS |
| AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8_1:-78080846 | Msa1216360:CDS |
| GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8_1:-78080294 | Msa1216360:CDS |
| CCAACAACGTGCTGCTATGG+TGG | 0.525200 | 8_1:-78079791 | Msa1216360:CDS |
| GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8_1:-78080444 | Msa1216360:CDS |
| GTTCAAATTCATGGCATGAA+TGG | 0.526661 | 8_1:-78080330 | Msa1216360:CDS |
| CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8_1:-78080726 | Msa1216360:CDS |
| CTTGAGGCTTGAGCGATGCC+AGG | 0.526844 | 8_1:+78083136 | None:intergenic |
| CAAGGTCTACCGGCAGGCGG+AGG | 0.530336 | 8_1:-78079934 | Msa1216360:CDS |
| ATGTAATTCACCTCAGGAGG+TGG | 0.534211 | 8_1:+78079727 | None:intergenic |
| AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8_1:-78080303 | Msa1216360:CDS |
| CCTGGTAGTATGGGTGGTGG+AGG | 0.540462 | 8_1:-78080018 | Msa1216360:CDS |
| GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8_1:-78080443 | Msa1216360:CDS |
| TCATTGGCTGCTGAAATCTC+TGG | 0.541514 | 8_1:+78079761 | None:intergenic |
| GCTGTTCAAGGTCTACCGGC+AGG | 0.542942 | 8_1:-78079940 | Msa1216360:CDS |
| GAATCACATGACATTGCAGC+TGG | 0.546046 | 8_1:+78079639 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.547967 | 8_1:+78079700 | None:intergenic |
| CCTCCACCACCCATACTACC+AGG | 0.550212 | 8_1:+78080018 | None:intergenic |
| GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8_1:-78080363 | Msa1216360:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8_1:-78080998 | Msa1216360:CDS |
| AACGGGCAGAAACCTGGTGG+TGG | 0.552729 | 8_1:-78080366 | Msa1216360:CDS |
| TCGATACCAATTGGTGGCGG+AGG | 0.554646 | 8_1:-78080123 | Msa1216360:CDS |
| TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8_1:-78080352 | Msa1216360:CDS |
| GAACCAACAACGTGCTGCTA+TGG | 0.559788 | 8_1:-78079794 | Msa1216360:CDS |
| ATGCAAATTGACAATGTCAA+AGG | 0.561214 | 8_1:-78080891 | Msa1216360:CDS |
| GGTGGTGGTCAATCTCATCC+TGG | 0.561328 | 8_1:-78080036 | Msa1216360:CDS |
| AGAAATGAGCAACCAGAGCT+GGG | 0.565461 | 8_1:+78079268 | None:intergenic |
| GGAGGGAATAATCAGAATCA+AGG | 0.567228 | 8_1:-78080261 | Msa1216360:CDS |
| ATGCCGCCGAATCAGCATCC+GGG | 0.568311 | 8_1:-78080669 | Msa1216360:CDS |
| GGATACATGTAATTCACCTC+AGG | 0.568572 | 8_1:+78079721 | None:intergenic |
| CTGGCATCGCTCAAGCCTCA+AGG | 0.569109 | 8_1:-78083135 | Msa1216360:CDS |
| GGTGGTGGAAACAAGAATGG+AGG | 0.570437 | 8_1:-78080192 | Msa1216360:CDS |
| CAAATTCATGGCATGAATGG+TGG | 0.570734 | 8_1:-78080327 | Msa1216360:CDS |
| CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8_1:+78080466 | None:intergenic |
| TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8_1:+78080814 | None:intergenic |
| GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8_1:+78080354 | None:intergenic |
| ATGCCTATGAACCGAATGGG+TGG | 0.581837 | 8_1:-78079973 | Msa1216360:CDS |
| GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8_1:-78080513 | Msa1216360:CDS |
| GGTAGTAATCAAAATAACGA+TGG | 0.583746 | 8_1:-78080162 | Msa1216360:CDS |
| GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8_1:-78081036 | Msa1216360:CDS |
| AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8_1:-78079750 | Msa1216360:CDS |
| ACAAACAATGTTCATGGTGA+TGG | 0.588045 | 8_1:-78079611 | Msa1216360:three_prime_UTR |
| ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8_1:-78080315 | Msa1216360:CDS |
| AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8_1:-78081043 | Msa1216360:CDS |
| GGGGTTTCTAATTACCATAG+AGG | 0.591890 | 8_1:-78079461 | Msa1216360:three_prime_UTR |
| TATATTGCATAAAATTAGAG+AGG | 0.592666 | 8_1:+78079558 | None:intergenic |
| GTGGTGGAAACAAGAATGGA+GGG | 0.595867 | 8_1:-78080191 | Msa1216360:CDS |
| CAACAAATACAACAACTACA+AGG | 0.597690 | 8_1:-78080798 | Msa1216360:CDS |
| AGGTCAGAATCAAAACCAGA+AGG | 0.597938 | 8_1:-78080853 | Msa1216360:CDS |
| TTTGGGAACACTCCATAACT+CGG | 0.598490 | 8_1:+78080968 | None:intergenic |
| ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8_1:-78080604 | Msa1216360:CDS |
| TGCCTATGAACCGAATGGGT+GGG | 0.602220 | 8_1:-78079972 | Msa1216360:CDS |
| GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8_1:-78080300 | Msa1216360:CDS |
| TGTGAGTAAGGATCTGGAGG+AGG | 0.603879 | 8_1:+78079685 | None:intergenic |
| AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8_1:-78080822 | Msa1216360:CDS |
| AATAATCAGAATCAAGGTGG+AGG | 0.605707 | 8_1:-78080255 | Msa1216360:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8_1:-78080297 | Msa1216360:CDS |
| AATGTTCATGGTGATGGTGA+TGG | 0.608623 | 8_1:-78079605 | Msa1216360:three_prime_UTR |
| TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8_1:+78080414 | None:intergenic |
| TCTCATCCTGGTAGTATGGG+TGG | 0.611507 | 8_1:-78080024 | Msa1216360:CDS |
| AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8_1:-78081281 | Msa1216360:CDS |
| CCAGGACCGGAAATGATGCA+GGG | 0.618163 | 8_1:-78079883 | Msa1216360:CDS |
| ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8_1:+78080456 | None:intergenic |
| ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8_1:-78081062 | Msa1216360:CDS |
| AGTATGCCTATGAACCGAAT+GGG | 0.622246 | 8_1:-78079976 | Msa1216360:CDS |
| GGTCAGAATCAAAACCAGAA+GGG | 0.626233 | 8_1:-78080852 | Msa1216360:CDS |
| ATGTCGATACCAATTGGTGG+CGG | 0.631785 | 8_1:-78080126 | Msa1216360:CDS |
| GTTCAAGGTCTACCGGCAGG+CGG | 0.633909 | 8_1:-78079937 | Msa1216360:CDS |
| GCATGTGAGTAAGGATCTGG+AGG | 0.633919 | 8_1:+78079682 | None:intergenic |
| GGTATGTCGATACCAATTGG+TGG | 0.637679 | 8_1:-78080129 | Msa1216360:CDS |
| CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8_1:-78080408 | Msa1216360:CDS |
| TACATGTAATTCACCTCAGG+AGG | 0.640426 | 8_1:+78079724 | None:intergenic |
| GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8_1:-78081057 | Msa1216360:CDS |
| CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8_1:-78080411 | Msa1216360:CDS |
| TAGTAATCAAAATAACGATG+GGG | 0.650397 | 8_1:-78080160 | Msa1216360:CDS |
| GAGTATGCCTATGAACCGAA+TGG | 0.653536 | 8_1:-78079977 | Msa1216360:CDS |
| TGCATAAAATTAGAGAGGAT+AGG | 0.655708 | 8_1:+78079563 | None:intergenic |
| TGGCCCGGATGCTGATTCGG+CGG | 0.659918 | 8_1:+78080666 | None:intergenic |
| AGTAATCAAAATAACGATGG+GGG | 0.662461 | 8_1:-78080159 | Msa1216360:CDS |
| AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8_1:-78080312 | Msa1216360:CDS |
| CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8_1:-78081061 | Msa1216360:CDS |
| CAGGACCGGAAATGATGCAG+GGG | 0.670762 | 8_1:-78079882 | Msa1216360:CDS |
| ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8_1:+78080467 | None:intergenic |
| CAAATTGACAATGTCAAAGG+TGG | 0.676115 | 8_1:-78080888 | Msa1216360:CDS |
| AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8_1:-78080873 | Msa1216360:CDS |
| GGGAATAATCAGAATCAAGG+TGG | 0.678494 | 8_1:-78080258 | Msa1216360:CDS |
| CAGAATCAAAACCAGAAGGG+TGG | 0.682186 | 8_1:-78080849 | Msa1216360:CDS |
| GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8_1:-78080825 | Msa1216360:CDS |
| GTATGCAAGGCCACCTCCTG+AGG | 0.686248 | 8_1:-78079737 | Msa1216360:CDS |
| GGAAACGGGCAGAAACCTGG+TGG | 0.694072 | 8_1:-78080369 | Msa1216360:CDS |
| TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8_1:+78080468 | None:intergenic |
| GTGGTGGAGGAAATAATATG+GGG | 0.726893 | 8_1:-78080005 | Msa1216360:CDS |
| GGAGGAGGTTACTTTCAAGG+TGG | 0.764262 | 8_1:-78079916 | Msa1216360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTAAAATTAAAAAT+TGG | - | chr8_1:78079740-78079759 | Msa1216360:CDS | 0.0% |
| !!! | AGTTTTTTAAATTTTTTTAG+CGG | - | chr8_1:78080156-78080175 | Msa1216360:CDS | 10.0% |
| !!! | CAATAAAACTTTTATTTTTT+CGG | + | chr8_1:78080244-78080263 | None:intergenic | 10.0% |
| !!! | TTATTATTTTGATTATTGTT+TGG | + | chr8_1:78081490-78081509 | None:intergenic | 10.0% |
| !!! | TTTATATGTGTTTATATTTT+GGG | - | chr8_1:78083075-78083094 | Msa1216360:intron | 10.0% |
| !! | AATAATACATAAAATATGCA+AGG | - | chr8_1:78080016-78080035 | Msa1216360:CDS | 15.0% |
| !!! | GTTTATATGTGTTTATATTT+TGG | - | chr8_1:78083074-78083093 | Msa1216360:intron | 15.0% |
| !!! | ATTTTTTTTGTCAAGTAACA+TGG | - | chr8_1:78079848-78079867 | Msa1216360:CDS | 20.0% |
| !! | AGAAAAATAGGGTTAAATTA+AGG | - | chr8_1:78080535-78080554 | Msa1216360:CDS | 20.0% |
| !! | GCAAAAAAAATAAAGAAAGA+TGG | + | chr8_1:78081026-78081045 | None:intergenic | 20.0% |
| !! | AAAATCTTACAGAAAATTGA+TGG | - | chr8_1:78081193-78081212 | Msa1216360:intron | 20.0% |
| !! | ATAATTGAAAGCTATGATTA+AGG | + | chr8_1:78081259-78081278 | None:intergenic | 20.0% |
| !! | AACATTTACTCTCAAAATTA+AGG | + | chr8_1:78081305-78081324 | None:intergenic | 20.0% |
| !!! | TTTTGATTATTGTTTGGTTT+GGG | + | chr8_1:78081484-78081503 | None:intergenic | 20.0% |
| !!! | ATTTTGATTATTGTTTGGTT+TGG | + | chr8_1:78081485-78081504 | None:intergenic | 20.0% |
| !!! | TAATGGATTTCAAAAAATGA+TGG | - | chr8_1:78082365-78082384 | Msa1216360:intron | 20.0% |
| !!! | AATGGATTTCAAAAAATGAT+GGG | - | chr8_1:78082366-78082385 | Msa1216360:intron | 20.0% |
| !! | TATATTGCATAAAATTAGAG+AGG | + | chr8_1:78082877-78082896 | None:intergenic | 20.0% |
| !! | TACTATGTTAATTATGTTCT+TGG | - | chr8_1:78083024-78083043 | Msa1216360:intron | 20.0% |
| !! | ACTATGTTAATTATGTTCTT+GGG | - | chr8_1:78083025-78083044 | Msa1216360:intron | 20.0% |
| !! | AAATCAATGTTATTGAGAAT+GGG | - | chr8_1:78083129-78083148 | Msa1216360:CDS | 20.0% |
| ! | AGAAAAATGAGAAAGTTTCT+GGG | - | chr8_1:78079252-78079271 | Msa1216360:three_prime_UTR | 25.0% |
| !!! | GAACCTACATATTTTAAATG+TGG | - | chr8_1:78079877-78079896 | Msa1216360:CDS | 25.0% |
| !! | TCTCCACATTTAAAATATGT+AGG | + | chr8_1:78079883-78079902 | None:intergenic | 25.0% |
| ! | GATATTGCATATTACATGTA+GGG | + | chr8_1:78079935-78079954 | None:intergenic | 25.0% |
| ! | TAGAAAGAGAGAAGAAAAAT+AGG | - | chr8_1:78080523-78080542 | Msa1216360:CDS | 25.0% |
| ! | AGAAAGAGAGAAGAAAAATA+GGG | - | chr8_1:78080524-78080543 | Msa1216360:CDS | 25.0% |
| ! | AAAATAGGGTTAAATTAAGG+TGG | - | chr8_1:78080538-78080557 | Msa1216360:CDS | 25.0% |
| !!! | TTTTTTCAACAATTTAACCG+TGG | + | chr8_1:78080595-78080614 | None:intergenic | 25.0% |
| !!! | TGTTTGGTGTCTTTATTTAT+TGG | + | chr8_1:78080665-78080684 | None:intergenic | 25.0% |
| ! | AAGGAAAAGAGAGAAATAAA+TGG | + | chr8_1:78080803-78080822 | None:intergenic | 25.0% |
| ! | TGAAATGAAATGAGAATAGA+AGG | + | chr8_1:78080822-78080841 | None:intergenic | 25.0% |
| !!! | TTGTTTGGTTGAGTTTTATT+TGG | + | chr8_1:78080853-78080872 | None:intergenic | 25.0% |
| !! | GAGTATTTTATGTTCTTGTT+TGG | + | chr8_1:78080868-78080887 | None:intergenic | 25.0% |
| ! | CTTGTGATAAATAAAGATCT+GGG | + | chr8_1:78080927-78080946 | None:intergenic | 25.0% |
| ! | ACTTGTGATAAATAAAGATC+TGG | + | chr8_1:78080928-78080947 | None:intergenic | 25.0% |
| ! | GTTACTTACTTTATTCCTAT+TGG | - | chr8_1:78080946-78080965 | Msa1216360:CDS | 25.0% |
| !!! | AGAAGAATTTTTGAAGATAC+AGG | - | chr8_1:78080979-78080998 | Msa1216360:CDS | 25.0% |
| !! | TCAAAATTAAGGTTCTGTTT+TGG | + | chr8_1:78081294-78081313 | None:intergenic | 25.0% |
| !!! | TGATTTTAGTGATGATGAAA+TGG | - | chr8_1:78081852-78081871 | Msa1216360:intron | 25.0% |
| ! | GTAGTAATCAAAATAACGAT+GGG | - | chr8_1:78082271-78082290 | Msa1216360:intron | 25.0% |
| ! | TAGTAATCAAAATAACGATG+GGG | - | chr8_1:78082272-78082291 | Msa1216360:intron | 25.0% |
| ! | TAAAAAACTCATGTTTCACT+GGG | + | chr8_1:78082905-78082924 | None:intergenic | 25.0% |
| ! | GAAATCAATGTTATTGAGAA+TGG | - | chr8_1:78083128-78083147 | Msa1216360:CDS | 25.0% |
| ! | TTTTTCTGATCCTTCTTTTC+TGG | + | chr8_1:78079239-78079258 | None:intergenic | 30.0% |
| CAGAAAAATGAGAAAGTTTC+TGG | - | chr8_1:78079251-78079270 | Msa1216360:three_prime_UTR | 30.0% | |
| ACTAGTAGTAACATCTATTG+AGG | + | chr8_1:78079423-78079442 | None:intergenic | 30.0% | |
| !!! | GCTTGATGTCACTTTTAAAA+GGG | - | chr8_1:78079458-78079477 | Msa1216360:three_prime_UTR | 30.0% |
| !!! | TTTTTTGTCAAGTAACATGG+TGG | - | chr8_1:78079851-78079870 | Msa1216360:CDS | 30.0% |
| GGATATTGCATATTACATGT+AGG | + | chr8_1:78079936-78079955 | None:intergenic | 30.0% | |
| TACATAAAATATGCAAGGTC+TGG | - | chr8_1:78080021-78080040 | Msa1216360:CDS | 30.0% | |
| ACATAAAATATGCAAGGTCT+GGG | - | chr8_1:78080022-78080041 | Msa1216360:CDS | 30.0% | |
| GTCTAAATAATATTTCCGTG+AGG | + | chr8_1:78080072-78080091 | None:intergenic | 30.0% | |
| GGTGATTATAGATCTGAAAA+TGG | + | chr8_1:78080890-78080909 | None:intergenic | 30.0% | |
| TTCTGCATACACAAATAACA+AGG | + | chr8_1:78081121-78081140 | None:intergenic | 30.0% | |
| !! | TGTGTTGATTAATGAATGAC+AGG | - | chr8_1:78081337-78081356 | Msa1216360:intron | 30.0% |
| ATGCAAATTGACAATGTCAA+AGG | - | chr8_1:78081541-78081560 | Msa1216360:intron | 30.0% | |
| CAACAAATACAACAACTACA+AGG | - | chr8_1:78081634-78081653 | Msa1216360:intron | 30.0% | |
| AACAACTTCAACAGATGAAA+GGG | - | chr8_1:78081707-78081726 | Msa1216360:intron | 30.0% | |
| ! | CAAGATCTAGCTCAATTTAA+AGG | - | chr8_1:78081733-78081752 | Msa1216360:intron | 30.0% |
| TTAACACCTTTAGCATCTTT+AGG | + | chr8_1:78081808-78081827 | None:intergenic | 30.0% | |
| !! | TGATGAGTTTGATGATGAAA+TGG | - | chr8_1:78081915-78081934 | Msa1216360:intron | 30.0% |
| ATGCCAGAAGCTAAAAATAA+TGG | - | chr8_1:78082219-78082238 | Msa1216360:intron | 30.0% | |
| GGTAGTAATCAAAATAACGA+TGG | - | chr8_1:78082270-78082289 | Msa1216360:intron | 30.0% | |
| AGTAATCAAAATAACGATGG+GGG | - | chr8_1:78082273-78082292 | Msa1216360:intron | 30.0% | |
| AATGTTCAGGCTATGAATAA+TGG | - | chr8_1:78082348-78082367 | Msa1216360:intron | 30.0% | |
| CATCAAACAAACAATGTTCA+TGG | - | chr8_1:78082815-78082834 | Msa1216360:intron | 30.0% | |
| TGCATAAAATTAGAGAGGAT+AGG | + | chr8_1:78082872-78082891 | None:intergenic | 30.0% | |
| CTAAAAAACTCATGTTTCAC+TGG | + | chr8_1:78082906-78082925 | None:intergenic | 30.0% | |
| TTCTATAAACTACTCCTCTA+TGG | + | chr8_1:78082988-78083007 | None:intergenic | 30.0% | |
| ATAGATGCAGCTAAATTTCC+TGG | - | chr8_1:78079278-78079297 | Msa1216360:three_prime_UTR | 35.0% | |
| AGTAACATCTATTGAGGTTG+TGG | + | chr8_1:78079417-78079436 | None:intergenic | 35.0% | |
| !!! | CGCTTGATGTCACTTTTAAA+AGG | - | chr8_1:78079457-78079476 | Msa1216360:three_prime_UTR | 35.0% |
| ! | GGTGAAATTGATTCTAAGAG+TGG | - | chr8_1:78079479-78079498 | Msa1216360:three_prime_UTR | 35.0% |
| CAAGTGATTATGTGTACGTT+TGG | - | chr8_1:78079503-78079522 | Msa1216360:three_prime_UTR | 35.0% | |
| GATTATGTGTACGTTTGGTT+CGG | - | chr8_1:78079508-78079527 | Msa1216360:three_prime_UTR | 35.0% | |
| CATATTACATGTAGGGATCA+GGG | + | chr8_1:78079928-78079947 | None:intergenic | 35.0% | |
| TGAGGTTAACTCAACTGATA+AGG | + | chr8_1:78079957-78079976 | None:intergenic | 35.0% | |
| !! | ATGATGACGATATTTTCGTG+AGG | + | chr8_1:78079975-78079994 | None:intergenic | 35.0% |
| CATAAAATATGCAAGGTCTG+GGG | - | chr8_1:78080023-78080042 | Msa1216360:CDS | 35.0% | |
| !!! | ATTTCCGTGAGGTTTTTTTG+TGG | + | chr8_1:78080061-78080080 | None:intergenic | 35.0% |
| AAATCACAATGATGCAAGAG+TGG | + | chr8_1:78080426-78080445 | None:intergenic | 35.0% | |
| CAATGAATTACTCACTTCTG+TGG | - | chr8_1:78080625-78080644 | Msa1216360:CDS | 35.0% | |
| ATCTGGGCTATAGAGAAAAA+TGG | + | chr8_1:78080911-78080930 | None:intergenic | 35.0% | |
| CTTCTTTACTCATGACCAAT+AGG | + | chr8_1:78080964-78080983 | None:intergenic | 35.0% | |
| AGAAAGATGGAGAATGTGAT+GGG | + | chr8_1:78081013-78081032 | None:intergenic | 35.0% | |
| AAGAAAGATGGAGAATGTGA+TGG | + | chr8_1:78081014-78081033 | None:intergenic | 35.0% | |
| AAAGTGAACATACACTGTGA+TGG | - | chr8_1:78081151-78081170 | Msa1216360:intron | 35.0% | |
| GCTTCTTGATGAGAACATTT+GGG | + | chr8_1:78081423-78081442 | None:intergenic | 35.0% | |
| AGCTTCTTGATGAGAACATT+TGG | + | chr8_1:78081424-78081443 | None:intergenic | 35.0% | |
| ATCAAGAAGCTTGCAAAATC+AGG | - | chr8_1:78081433-78081452 | Msa1216360:intron | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | - | chr8_1:78081434-78081453 | Msa1216360:intron | 35.0% | |
| ACTGATTAACAACGTTGTTC+TGG | + | chr8_1:78081513-78081532 | None:intergenic | 35.0% | |
| CAAATTGACAATGTCAAAGG+TGG | - | chr8_1:78081544-78081563 | Msa1216360:intron | 35.0% | |
| ! | TGTATTTGTTGACCACCTTT+GGG | + | chr8_1:78081625-78081644 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGACCACCTT+TGG | + | chr8_1:78081626-78081645 | None:intergenic | 35.0% |
| CAACAACTTCAACAGATGAA+AGG | - | chr8_1:78081706-78081725 | Msa1216360:intron | 35.0% | |
| !! | CATCTTTAGGATTCTGATTC+GGG | + | chr8_1:78081795-78081814 | None:intergenic | 35.0% |
| !! | GCATCTTTAGGATTCTGATT+CGG | + | chr8_1:78081796-78081815 | None:intergenic | 35.0% |
| CAGAATCCTAAAGATGCTAA+AGG | - | chr8_1:78081799-78081818 | Msa1216360:intron | 35.0% | |
| CTAAAATCATCCTCATCTTC+AGG | + | chr8_1:78081841-78081860 | None:intergenic | 35.0% | |
| !! | GAGTTTGATGATGAAATGGT+TGG | - | chr8_1:78081919-78081938 | Msa1216360:intron | 35.0% |
| ! | ATGAAGGGTGGCAATTTTAA+TGG | - | chr8_1:78082036-78082055 | Msa1216360:intron | 35.0% |
| !! | AATTTTAATGGCGGTGGAAA+CGG | - | chr8_1:78082048-78082067 | Msa1216360:intron | 35.0% |
| TTCATGCCATGAATTTGAAC+CGG | + | chr8_1:78082102-78082121 | None:intergenic | 35.0% | |
| GTTCAAATTCATGGCATGAA+TGG | - | chr8_1:78082102-78082121 | Msa1216360:intron | 35.0% | |
| AATAATCAGAATCAAGGTGG+AGG | - | chr8_1:78082177-78082196 | Msa1216360:intron | 35.0% | |
| GGTGGAGGTAACAAAAATAA+TGG | - | chr8_1:78082192-78082211 | Msa1216360:intron | 35.0% | |
| GGAGGTAACAAAAATAATGG+TGG | - | chr8_1:78082195-78082214 | Msa1216360:intron | 35.0% | |
| !!! | CCACCATTATTTTTAGCTTC+TGG | + | chr8_1:78082225-78082244 | None:intergenic | 35.0% |
| CCAGAAGCTAAAAATAATGG+TGG | - | chr8_1:78082222-78082241 | Msa1216360:intron | 35.0% | |
| GAAGCTAAAAATAATGGTGG+TGG | - | chr8_1:78082225-78082244 | Msa1216360:intron | 35.0% | |
| AACAAGAATGGAGGGAATAA+TGG | - | chr8_1:78082249-78082268 | Msa1216360:intron | 35.0% | |
| ! | GGATTTCAAAAAATGATGGG+TGG | - | chr8_1:78082369-78082388 | Msa1216360:intron | 35.0% |
| !! | TTTCAAAAAATGATGGGTGG+TGG | - | chr8_1:78082372-78082391 | Msa1216360:intron | 35.0% |
| ACAACAACAGCAACAGTTAA+TGG | - | chr8_1:78082602-78082621 | Msa1216360:intron | 35.0% | |
| ACAAACAATGTTCATGGTGA+TGG | - | chr8_1:78082821-78082840 | Msa1216360:intron | 35.0% | |
| ! | ACTTTTCCATTTGTGCCTTG+AGG | + | chr8_1:78079315-78079334 | None:intergenic | 40.0% |
| GCATATTACATGTAGGGATC+AGG | + | chr8_1:78079929-78079948 | None:intergenic | 40.0% | |
| TCAGCCACAAAAAAACCTCA+CGG | - | chr8_1:78080054-78080073 | Msa1216360:CDS | 40.0% | |
| TCTCGAGTTTGTGTCTATCT+CGG | - | chr8_1:78080099-78080118 | Msa1216360:CDS | 40.0% | |
| GGAGAGAGAAAATATGTGAG+AGG | + | chr8_1:78080399-78080418 | None:intergenic | 40.0% | |
| CTAAGCCAATTGAAGTCACA+TGG | - | chr8_1:78080569-78080588 | Msa1216360:CDS | 40.0% | |
| ! | CCAAGAGTTTGCTCTATGTT+TGG | + | chr8_1:78080681-78080700 | None:intergenic | 40.0% |
| CCAAACATAGAGCAAACTCT+TGG | - | chr8_1:78080678-78080697 | Msa1216360:CDS | 40.0% | |
| AGTAGTCACTGAGAGAGAAT+GGG | + | chr8_1:78080713-78080732 | None:intergenic | 40.0% | |
| TAGTAGTCACTGAGAGAGAA+TGG | + | chr8_1:78080714-78080733 | None:intergenic | 40.0% | |
| TTAGGAAGAGAGAGAATGGT+GGG | + | chr8_1:78080740-78080759 | None:intergenic | 40.0% | |
| AGAGTTAGGAAGAGAGAGAA+TGG | + | chr8_1:78080744-78080763 | None:intergenic | 40.0% | |
| AAGACGCAAGTTTGAGAGTT+AGG | + | chr8_1:78080758-78080777 | None:intergenic | 40.0% | |
| ACTGAGATAGATGCAGAACA+AGG | - | chr8_1:78081370-78081389 | Msa1216360:intron | 40.0% | |
| CTGAGATAGATGCAGAACAA+GGG | - | chr8_1:78081371-78081390 | Msa1216360:intron | 40.0% | |
| TTTGGGAACACTCCATAACT+CGG | + | chr8_1:78081467-78081486 | None:intergenic | 40.0% | |
| ATTGACAATGTCAAAGGTGG+TGG | - | chr8_1:78081547-78081566 | Msa1216360:intron | 40.0% | |
| !! | AAAGGTGGTGGAAACAACAA+AGG | - | chr8_1:78081559-78081578 | Msa1216360:intron | 40.0% |
| AGGTCAGAATCAAAACCAGA+AGG | - | chr8_1:78081579-78081598 | Msa1216360:intron | 40.0% | |
| GGTCAGAATCAAAACCAGAA+GGG | - | chr8_1:78081580-78081599 | Msa1216360:intron | 40.0% | |
| GGAAACAATAACCAACCCAA+AGG | - | chr8_1:78081607-78081626 | Msa1216360:intron | 40.0% | |
| AACAATAACCAACCCAAAGG+TGG | - | chr8_1:78081610-78081629 | Msa1216360:intron | 40.0% | |
| ATTTGATGTGCCTGAAGATG+AGG | - | chr8_1:78081828-78081847 | Msa1216360:intron | 40.0% | |
| GAAGGGGGTTTCATCTTATT+AGG | + | chr8_1:78081952-78081971 | None:intergenic | 40.0% | |
| GTGCTCACATGATGTTGAAT+GGG | - | chr8_1:78081989-78082008 | Msa1216360:intron | 40.0% | |
| TTCATAGCACTCATAAGCTG+TGG | + | chr8_1:78082021-78082040 | None:intergenic | 40.0% | |
| ACAGCTTATGAGTGCTATGA+AGG | - | chr8_1:78082020-78082039 | Msa1216360:intron | 40.0% | |
| CAGCTTATGAGTGCTATGAA+GGG | - | chr8_1:78082021-78082040 | Msa1216360:intron | 40.0% | |
| !! | AAGGGTGGCAATTTTAATGG+CGG | - | chr8_1:78082039-78082058 | Msa1216360:intron | 40.0% |
| !! | ATTTTAATGGCGGTGGAAAC+GGG | - | chr8_1:78082049-78082068 | Msa1216360:intron | 40.0% |
| CAAATTCATGGCATGAATGG+TGG | - | chr8_1:78082105-78082124 | Msa1216360:intron | 40.0% | |
| ! | ATGAATGGTGGAAATGGCAA+TGG | - | chr8_1:78082117-78082136 | Msa1216360:intron | 40.0% |
| AATGGCAATGGAGGAAAGAA+AGG | - | chr8_1:78082129-78082148 | Msa1216360:intron | 40.0% | |
| GGAGGGAATAATCAGAATCA+AGG | - | chr8_1:78082171-78082190 | Msa1216360:intron | 40.0% | |
| GGGAATAATCAGAATCAAGG+TGG | - | chr8_1:78082174-78082193 | Msa1216360:intron | 40.0% | |
| !! | AATGGTGGTGGAAACAAGAA+TGG | - | chr8_1:78082237-78082256 | Msa1216360:intron | 40.0% |
| AAATAACGATGGGGGTAAGA+AGG | - | chr8_1:78082281-78082300 | Msa1216360:intron | 40.0% | |
| AATAACGATGGGGGTAAGAA+GGG | - | chr8_1:78082282-78082301 | Msa1216360:intron | 40.0% | |
| ! | AAGGGTATGTCGATACCAAT+TGG | - | chr8_1:78082300-78082319 | Msa1216360:intron | 40.0% |
| TCAATCTCATCCTGGTAGTA+TGG | - | chr8_1:78082404-78082423 | Msa1216360:intron | 40.0% | |
| CAATCTCATCCTGGTAGTAT+GGG | - | chr8_1:78082405-78082424 | Msa1216360:intron | 40.0% | |
| !! | GGTGGTGGAGGAAATAATAT+GGG | - | chr8_1:78082426-78082445 | Msa1216360:intron | 40.0% |
| ! | GTGGTGGAGGAAATAATATG+GGG | - | chr8_1:78082427-78082446 | Msa1216360:intron | 40.0% |
| AGTATGCCTATGAACCGAAT+GGG | - | chr8_1:78082456-78082475 | Msa1216360:intron | 40.0% | |
| TACATGTAATTCACCTCAGG+AGG | + | chr8_1:78082711-78082730 | None:intergenic | 40.0% | |
| GGATACATGTAATTCACCTC+AGG | + | chr8_1:78082714-78082733 | None:intergenic | 40.0% | |
| AAAGCATGTGAGTAAGGATC+TGG | + | chr8_1:78082756-78082775 | None:intergenic | 40.0% | |
| !! | AATGTTCATGGTGATGGTGA+TGG | - | chr8_1:78082827-78082846 | Msa1216360:intron | 40.0% |
| ! | TTTGACCCCCTTTTCATCTT+AGG | - | chr8_1:78082949-78082968 | Msa1216360:intron | 40.0% |
| ! | TTGACCCCCTTTTCATCTTA+GGG | - | chr8_1:78082950-78082969 | Msa1216360:intron | 40.0% |
| AAACCCCCTAAGATGAAAAG+GGG | + | chr8_1:78082958-78082977 | None:intergenic | 40.0% | |
| GAAACCCCCTAAGATGAAAA+GGG | + | chr8_1:78082959-78082978 | None:intergenic | 40.0% | |
| AGAAACCCCCTAAGATGAAA+AGG | + | chr8_1:78082960-78082979 | None:intergenic | 40.0% | |
| GGGGTTTCTAATTACCATAG+AGG | - | chr8_1:78082971-78082990 | Msa1216360:intron | 40.0% | |
| ATGAAAGAAATTCCCAGCTC+TGG | - | chr8_1:78083152-78083171 | Msa1216360:CDS | 40.0% | |
| TCGTCATCATGAGCTTAGCT+CGG | - | chr8_1:78079985-78080004 | Msa1216360:CDS | 45.0% | |
| !!! | GTGAGGTTTTTTTGTGGCTG+AGG | + | chr8_1:78080055-78080074 | None:intergenic | 45.0% |
| CTCGAGTTTGTGTCTATCTC+GGG | - | chr8_1:78080100-78080119 | Msa1216360:CDS | 45.0% | |
| !! | GAAGTGCTACTTGCTAGAAG+GGG | + | chr8_1:78080377-78080396 | None:intergenic | 45.0% |
| !! | GGAAGTGCTACTTGCTAGAA+GGG | + | chr8_1:78080378-78080397 | None:intergenic | 45.0% |
| !! | AGGAAGTGCTACTTGCTAGA+AGG | + | chr8_1:78080379-78080398 | None:intergenic | 45.0% |
| TCACAATGATGCAAGAGTGG+AGG | + | chr8_1:78080423-78080442 | None:intergenic | 45.0% | |
| TGACTTGAAGACTGTGAGGT+GGG | + | chr8_1:78080485-78080504 | None:intergenic | 45.0% | |
| ! | TTGACTTGAAGACTGTGAGG+TGG | + | chr8_1:78080486-78080505 | None:intergenic | 45.0% |
| ! | AGCTTGACTTGAAGACTGTG+AGG | + | chr8_1:78080489-78080508 | None:intergenic | 45.0% |
| CAATTGAAGTCACATGGCCA+CGG | - | chr8_1:78080575-78080594 | Msa1216360:CDS | 45.0% | |
| GTAGTCACTGAGAGAGAATG+GGG | + | chr8_1:78080712-78080731 | None:intergenic | 45.0% | |
| GTTAGGAAGAGAGAGAATGG+TGG | + | chr8_1:78080741-78080760 | None:intergenic | 45.0% | |
| GATAGATGCAGAACAAGGGA+AGG | - | chr8_1:78081375-78081394 | Msa1216360:intron | 45.0% | |
| AAGGGAAGGTCACAGTTTCA+GGG | - | chr8_1:78081389-78081408 | Msa1216360:intron | 45.0% | |
| CAGAATCAAAACCAGAAGGG+TGG | - | chr8_1:78081583-78081602 | Msa1216360:intron | 45.0% | |
| AATCAAAACCAGAAGGGTGG+TGG | - | chr8_1:78081586-78081605 | Msa1216360:intron | 45.0% | |
| TATTGTTTCCACCACCCTTC+TGG | + | chr8_1:78081597-78081616 | None:intergenic | 45.0% | |
| TTTGTTGACCACCTTTGGGT+TGG | + | chr8_1:78081621-78081640 | None:intergenic | 45.0% | |
| !! | TAGGATTCTGATTCGGGTTC+TGG | + | chr8_1:78081789-78081808 | None:intergenic | 45.0% |
| GGGGGTTTCATCTTATTAGG+TGG | + | chr8_1:78081949-78081968 | None:intergenic | 45.0% | |
| AAACCCCCTTCTATGCCTAT+GGG | - | chr8_1:78081961-78081980 | Msa1216360:intron | 45.0% | |
| ATTCCCCATAGGCATAGAAG+GGG | + | chr8_1:78081968-78081987 | None:intergenic | 45.0% | |
| CATTCCCCATAGGCATAGAA+GGG | + | chr8_1:78081969-78081988 | None:intergenic | 45.0% | |
| GGTGCTCACATGATGTTGAA+TGG | - | chr8_1:78081988-78082007 | Msa1216360:intron | 45.0% | |
| CTTATGAGTGCTATGAAGGG+TGG | - | chr8_1:78082024-78082043 | Msa1216360:intron | 45.0% | |
| ! | CATGGCATGAATGGTGGAAA+TGG | - | chr8_1:78082111-78082130 | Msa1216360:intron | 45.0% |
| ! | AATGGTGGAAATGGCAATGG+AGG | - | chr8_1:78082120-78082139 | Msa1216360:intron | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr8_1:78082135-78082154 | Msa1216360:intron | 45.0% | |
| ! | GTGGTGGAAACAAGAATGGA+GGG | - | chr8_1:78082241-78082260 | Msa1216360:intron | 45.0% |
| GGTATGTCGATACCAATTGG+TGG | - | chr8_1:78082303-78082322 | Msa1216360:intron | 45.0% | |
| ATGTCGATACCAATTGGTGG+CGG | - | chr8_1:78082306-78082325 | Msa1216360:intron | 45.0% | |
| !! | CAAAAAATGATGGGTGGTGG+AGG | - | chr8_1:78082375-78082394 | Msa1216360:intron | 45.0% |
| !! | GGGTGGTGGAGGAAATAATA+TGG | - | chr8_1:78082425-78082444 | Msa1216360:intron | 45.0% |
| CGGTTCATAGGCATACTCAT+TGG | + | chr8_1:78082453-78082472 | None:intergenic | 45.0% | |
| GAGTATGCCTATGAACCGAA+TGG | - | chr8_1:78082455-78082474 | Msa1216360:intron | 45.0% | |
| TGCTGCTGCTGTTGTTGATA+TGG | + | chr8_1:78082579-78082598 | None:intergenic | 45.0% | |
| ! | TCATTGGCTGCTGAAATCTC+TGG | + | chr8_1:78082674-78082693 | None:intergenic | 45.0% |
| AGCAGCCAATGATGTATGCA+AGG | - | chr8_1:78082682-78082701 | Msa1216360:intron | 45.0% | |
| ATGTAATTCACCTCAGGAGG+TGG | + | chr8_1:78082708-78082727 | None:intergenic | 45.0% | |
| AAGGATCTGGAGGAGGATAA+GGG | + | chr8_1:78082743-78082762 | None:intergenic | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | + | chr8_1:78082744-78082763 | None:intergenic | 45.0% | |
| ! | TCGCTGAAAGCATGTGAGTA+AGG | + | chr8_1:78082762-78082781 | None:intergenic | 45.0% |
| GAATCACATGACATTGCAGC+TGG | + | chr8_1:78082796-78082815 | None:intergenic | 45.0% | |
| ! | TGACCCCCTTTTCATCTTAG+GGG | - | chr8_1:78082951-78082970 | Msa1216360:intron | 45.0% |
| AACCCCCTAAGATGAAAAGG+GGG | + | chr8_1:78082957-78082976 | None:intergenic | 45.0% | |
| AGAAATGAGCAACCAGAGCT+GGG | + | chr8_1:78083167-78083186 | None:intergenic | 45.0% | |
| !!! | AATTTAATTTATTTTTTTGA+AGG | - | chr8_1:78079795-78079814 | Msa1216360:CDS | 5.0% |
| CTCAAGCCTCAAGGCACAAA+TGG | - | chr8_1:78079306-78079325 | Msa1216360:three_prime_UTR | 50.0% | |
| CAATGATGCAAGAGTGGAGG+TGG | + | chr8_1:78080420-78080439 | None:intergenic | 50.0% | |
| CGTGGCCATGTGACTTCAAT+TGG | + | chr8_1:78080577-78080596 | None:intergenic | 50.0% | |
| CAAGGGAAGGTCACAGTTTC+AGG | - | chr8_1:78081388-78081407 | Msa1216360:intron | 50.0% | |
| GGTCACAGTTTCAGGGAATG+TGG | - | chr8_1:78081396-78081415 | Msa1216360:intron | 50.0% | |
| CAGGGAAACATGCCGAGTTA+TGG | - | chr8_1:78081452-78081471 | Msa1216360:intron | 50.0% | |
| GAAACCCCCTTCTATGCCTA+TGG | - | chr8_1:78081960-78081979 | Msa1216360:intron | 50.0% | |
| AACCCCCTTCTATGCCTATG+GGG | - | chr8_1:78081962-78081981 | Msa1216360:intron | 50.0% | |
| TTCCCCATAGGCATAGAAGG+GGG | + | chr8_1:78081967-78081986 | None:intergenic | 50.0% | |
| CCATTCCCCATAGGCATAGA+AGG | + | chr8_1:78081970-78081989 | None:intergenic | 50.0% | |
| CCTTCTATGCCTATGGGGAA+TGG | - | chr8_1:78081967-78081986 | Msa1216360:intron | 50.0% | |
| ATGTGAGCACCATTCCCCAT+AGG | + | chr8_1:78081979-78081998 | None:intergenic | 50.0% | |
| !! | GGTGGCAATTTTAATGGCGG+TGG | - | chr8_1:78082042-78082061 | Msa1216360:intron | 50.0% |
| CCATGAATTTGAACCGGCAC+AGG | + | chr8_1:78082096-78082115 | None:intergenic | 50.0% | |
| !! | CCTGTGCCGGTTCAAATTCA+TGG | - | chr8_1:78082093-78082112 | Msa1216360:intron | 50.0% |
| GGCAATGGAGGAAAGAAAGG+TGG | - | chr8_1:78082132-78082151 | Msa1216360:intron | 50.0% | |
| !! | GGTGGTGGAAACAAGAATGG+AGG | - | chr8_1:78082240-78082259 | Msa1216360:intron | 50.0% |
| !! | AAAATGATGGGTGGTGGAGG+TGG | - | chr8_1:78082378-78082397 | Msa1216360:intron | 50.0% |
| TCTCATCCTGGTAGTATGGG+TGG | - | chr8_1:78082408-78082427 | Msa1216360:intron | 50.0% | |
| ATGCCTATGAACCGAATGGG+TGG | - | chr8_1:78082459-78082478 | Msa1216360:intron | 50.0% | |
| TGCCTATGAACCGAATGGGT+GGG | - | chr8_1:78082460-78082479 | Msa1216360:intron | 50.0% | |
| TTCCCACCCATTCGGTTCAT+AGG | + | chr8_1:78082465-78082484 | None:intergenic | 50.0% | |
| CAGGAATGTTCCCACCCATT+CGG | + | chr8_1:78082473-78082492 | None:intergenic | 50.0% | |
| GGGAACATTCCTGCTGTTCA+AGG | - | chr8_1:78082480-78082499 | Msa1216360:intron | 50.0% | |
| TCCTGCTGTTCAAGGTCTAC+CGG | - | chr8_1:78082488-78082507 | Msa1216360:intron | 50.0% | |
| ! | GGAGGAGGTTACTTTCAAGG+TGG | - | chr8_1:78082516-78082535 | Msa1216360:intron | 50.0% |
| ! | GGAGGTTACTTTCAAGGTGG+TGG | - | chr8_1:78082519-78082538 | Msa1216360:intron | 50.0% |
| ! | GGTTACTTTCAAGGTGGTGG+TGG | - | chr8_1:78082522-78082541 | Msa1216360:intron | 50.0% |
| !! | TACTTTCAAGGTGGTGGTGG+TGG | - | chr8_1:78082525-78082544 | Msa1216360:intron | 50.0% |
| GGATTCCCCTGCATCATTTC+CGG | + | chr8_1:78082558-78082577 | None:intergenic | 50.0% | |
| ! | GAACCAACAACGTGCTGCTA+TGG | - | chr8_1:78082638-78082657 | Msa1216360:intron | 50.0% |
| ! | GGTGGCCTTGCATACATCAT+TGG | + | chr8_1:78082690-78082709 | None:intergenic | 50.0% |
| TCTGGAGGAGGATAAGGGTA+AGG | + | chr8_1:78082738-78082757 | None:intergenic | 50.0% | |
| TGTGAGTAAGGATCTGGAGG+AGG | + | chr8_1:78082750-78082769 | None:intergenic | 50.0% | |
| GCATGTGAGTAAGGATCTGG+AGG | + | chr8_1:78082753-78082772 | None:intergenic | 50.0% | |
| ! | GACCCCCTTTTCATCTTAGG+GGG | - | chr8_1:78082952-78082971 | Msa1216360:intron | 50.0% |
| GAGAAATGAGCAACCAGAGC+TGG | + | chr8_1:78083168-78083187 | None:intergenic | 50.0% | |
| ! | TTCTGGCCCGGATGCTGATT+CGG | + | chr8_1:78081772-78081791 | None:intergenic | 55.0% |
| !! | TTCTGATTCGGGTTCTGGCC+CGG | + | chr8_1:78081784-78081803 | None:intergenic | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+TGG | - | chr8_1:78082138-78082157 | Msa1216360:intron | 55.0% |
| !! | GGAAAGAAAGGTGGTGGTGG+TGG | - | chr8_1:78082141-78082160 | Msa1216360:intron | 55.0% |
| !! | AAGAAAGGTGGTGGTGGTGG+TGG | - | chr8_1:78082144-78082163 | Msa1216360:intron | 55.0% |
| !! | TCGATACCAATTGGTGGCGG+AGG | - | chr8_1:78082309-78082328 | Msa1216360:intron | 55.0% |
| !! | ATACCAATTGGTGGCGGAGG+TGG | - | chr8_1:78082312-78082331 | Msa1216360:intron | 55.0% |
| ! | AGGCGGTGGTGGTAATGTTC+AGG | - | chr8_1:78082335-78082354 | Msa1216360:intron | 55.0% |
| ! | GGTGGTGGTCAATCTCATCC+TGG | - | chr8_1:78082396-78082415 | Msa1216360:intron | 55.0% |
| CATCCTGGTAGTATGGGTGG+TGG | - | chr8_1:78082411-78082430 | Msa1216360:intron | 55.0% | |
| ! | GGCGGAGGAGGTTACTTTCA+AGG | - | chr8_1:78082513-78082532 | Msa1216360:intron | 55.0% |
| TCCAGGACCGGAAATGATGC+AGG | - | chr8_1:78082548-78082567 | Msa1216360:intron | 55.0% | |
| CCAGGACCGGAAATGATGCA+GGG | - | chr8_1:78082549-78082568 | Msa1216360:intron | 55.0% | |
| CAGGACCGGAAATGATGCAG+GGG | - | chr8_1:78082550-78082569 | Msa1216360:intron | 55.0% | |
| CCACCATAGCAGCACGTTGT+TGG | + | chr8_1:78082644-78082663 | None:intergenic | 55.0% | |
| ! | CCAACAACGTGCTGCTATGG+TGG | - | chr8_1:78082641-78082660 | Msa1216360:intron | 55.0% |
| GGAGGAGGATAAGGGTAAGG+AGG | + | chr8_1:78082735-78082754 | None:intergenic | 55.0% | |
| CTTGAGGCTTGAGCGATGCC+AGG | + | chr8_1:78079299-78079318 | None:intergenic | 60.0% | |
| CTGGCATCGCTCAAGCCTCA+AGG | - | chr8_1:78079297-78079316 | Msa1216360:three_prime_UTR | 60.0% | |
| AGTTGCTGCTGCTGCTGCTG+AGG | + | chr8_1:78081667-78081686 | None:intergenic | 60.0% | |
| GATGCCGCCGAATCAGCATC+CGG | - | chr8_1:78081762-78081781 | Msa1216360:intron | 60.0% | |
| ATGCCGCCGAATCAGCATCC+GGG | - | chr8_1:78081763-78081782 | Msa1216360:intron | 60.0% | |
| GGTGGAAACGGGCAGAAACC+TGG | - | chr8_1:78082060-78082079 | Msa1216360:intron | 60.0% | |
| GGAAACGGGCAGAAACCTGG+TGG | - | chr8_1:78082063-78082082 | Msa1216360:intron | 60.0% | |
| AACGGGCAGAAACCTGGTGG+TGG | - | chr8_1:78082066-78082085 | Msa1216360:intron | 60.0% | |
| !! | AAAGGTGGTGGTGGTGGTGG+TGG | - | chr8_1:78082147-78082166 | Msa1216360:intron | 60.0% |
| !! | ATGATGGGTGGTGGAGGTGG+TGG | - | chr8_1:78082381-78082400 | Msa1216360:intron | 60.0% |
| CCTCCACCACCCATACTACC+AGG | + | chr8_1:78082417-78082436 | None:intergenic | 60.0% | |
| ! | CCTGGTAGTATGGGTGGTGG+AGG | - | chr8_1:78082414-78082433 | Msa1216360:intron | 60.0% |
| GCCGGTAGACCTTGAACAGC+AGG | + | chr8_1:78082492-78082511 | None:intergenic | 60.0% | |
| GCTGTTCAAGGTCTACCGGC+AGG | - | chr8_1:78082492-78082511 | Msa1216360:intron | 60.0% | |
| GTTCAAGGTCTACCGGCAGG+CGG | - | chr8_1:78082495-78082514 | Msa1216360:intron | 60.0% | |
| AAGTAACCTCCTCCGCCTGC+CGG | + | chr8_1:78082510-78082529 | None:intergenic | 60.0% | |
| CCCTGCATCATTTCCGGTCC+TGG | + | chr8_1:78082552-78082571 | None:intergenic | 60.0% | |
| GTATGCAAGGCCACCTCCTG+AGG | - | chr8_1:78082695-78082714 | Msa1216360:intron | 60.0% | |
| !! | TGGCCCGGATGCTGATTCGG+CGG | + | chr8_1:78081769-78081788 | None:intergenic | 65.0% |
| !! | GGGCAGAAACCTGGTGGTGG+AGG | - | chr8_1:78082069-78082088 | Msa1216360:intron | 65.0% |
| !! | TGGTGGTGGAGGACCTGTGC+CGG | - | chr8_1:78082080-78082099 | Msa1216360:intron | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGA+GGG | - | chr8_1:78082154-78082173 | Msa1216360:intron | 65.0% |
| CCTCCACCTCCGCCACCAAT+TGG | + | chr8_1:78082318-78082337 | None:intergenic | 65.0% | |
| !! | CCAATTGGTGGCGGAGGTGG+AGG | - | chr8_1:78082315-78082334 | Msa1216360:intron | 65.0% |
| !! | ATTGGTGGCGGAGGTGGAGG+CGG | - | chr8_1:78082318-78082337 | Msa1216360:intron | 65.0% |
| !! | CAAGGTGGTGGTGGTGGTCC+AGG | - | chr8_1:78082531-78082550 | Msa1216360:intron | 65.0% |
| !! | TGGTGGTGGTGGTCCAGGAC+CGG | - | chr8_1:78082536-78082555 | Msa1216360:intron | 65.0% |
| GGCACAGGTCCTCCACCACC+AGG | + | chr8_1:78082081-78082100 | None:intergenic | 70.0% | |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr8_1:78082150-78082169 | Msa1216360:intron | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+AGG | - | chr8_1:78082150-78082169 | Msa1216360:intron | 70.0% |
| CAAGGTCTACCGGCAGGCGG+AGG | - | chr8_1:78082498-78082517 | Msa1216360:intron | 70.0% | |
| GGTCTACCGGCAGGCGGAGG+AGG | - | chr8_1:78082501-78082520 | Msa1216360:intron | 75.0% | |
| !!! | GGTGGCGGAGGTGGAGGCGG+TGG | - | chr8_1:78082321-78082340 | Msa1216360:intron | 80.0% |
| ! | GGCGGAGGTGGAGGCGGTGG+TGG | - | chr8_1:78082324-78082343 | Msa1216360:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 78079233 | 78083221 | 78079233 | ID=Msa1216360;Name=Msa1216360 |
| chr8_1 | mRNA | 78079233 | 78083221 | 78079233 | ID=Msa1216360-mRNA-1;Parent=Msa1216360;Name=Msa1216360-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0.66|0.66|1|1|3|409|544 |
| chr8_1 | exon | 78079233 | 78081095 | 78079233 | ID=Msa1216360-mRNA-1:exon:27001;Parent=Msa1216360-mRNA-1 |
| chr8_1 | exon | 78081240 | 78081315 | 78081240 | ID=Msa1216360-mRNA-1:exon:27000;Parent=Msa1216360-mRNA-1 |
| chr8_1 | exon | 78083117 | 78083221 | 78083117 | ID=Msa1216360-mRNA-1:exon:26999;Parent=Msa1216360-mRNA-1 |
| chr8_1 | CDS | 78083117 | 78083221 | 78083117 | ID=Msa1216360-mRNA-1:cds;Parent=Msa1216360-mRNA-1 |
| chr8_1 | CDS | 78081240 | 78081315 | 78081240 | ID=Msa1216360-mRNA-1:cds;Parent=Msa1216360-mRNA-1 |
| chr8_1 | CDS | 78079642 | 78081095 | 78079642 | ID=Msa1216360-mRNA-1:cds;Parent=Msa1216360-mRNA-1 |
| chr8_1 | three_prime_UTR | 78079233 | 78079641 | 78079233 | ID=Msa1216360-mRNA-1:three_prime_utr;Parent=Msa1216360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
