Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417690 | XP_013460823.1 | 89.655 | 261 | 21 | 2 | 1 | 258 | 14 | 271 | 6.84e-129 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417690 | sp|Q39008|M3K1_ARATH | 36.364 | 231 | 93 | 6 | 11 | 188 | 26 | 255 | 3.96e-22 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417690 | A0A072UZA9 | 89.655 | 261 | 21 | 2 | 1 | 258 | 14 | 271 | 3.27e-129 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0207000 | Msa0417690 | -0.801652 | 8.139214e-49 | -8.615850e-47 |
| Msa0378340 | Msa0417690 | -0.801545 | 8.561214e-49 | -8.615850e-47 |
| Msa0417690 | Msa0417760 | 0.813238 | 2.832563e-51 | -8.615850e-47 |
| Msa0417690 | Msa0518520 | -0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa0417690 | Msa0524120 | -0.814313 | 1.641638e-51 | -8.615850e-47 |
| Msa0417690 | Msa0714600 | -0.804317 | 2.289358e-49 | -8.615850e-47 |
| Msa0417690 | Msa0725480 | 0.841601 | 4.305322e-58 | -8.615850e-47 |
| Msa0417690 | Msa0766100 | 0.847001 | 1.523809e-59 | -8.615850e-47 |
| Msa0417690 | Msa0837990 | -0.822904 | 1.845872e-53 | -8.615850e-47 |
| Msa0417690 | Msa1018020 | 0.808662 | 2.774072e-50 | -8.615850e-47 |
| Msa0417690 | Msa1147980 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
| Msa0417690 | Msa1220450 | 0.803993 | 2.673462e-49 | -8.615850e-47 |
| Msa0417690 | Msa1220460 | 0.807228 | 5.601508e-50 | -8.615850e-47 |
| Msa0417690 | Msa1220480 | 0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa0417690 | Msa1223460 | -0.800986 | 1.114263e-48 | -8.615850e-47 |
| Msa0417690 | Msa1263660 | -0.812065 | 5.114710e-51 | -8.615850e-47 |
| Msa0417690 | Msa1382720 | -0.803191 | 3.921796e-49 | -8.615850e-47 |
| Msa0298940 | Msa0417690 | -0.809256 | 2.070651e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417690 | MtrunA17_Chr3g0115171 | 89.655 | 261 | 21 | 2 | 1 | 258 | 14 | 271 | 4.87e-132 | 384 |
| Msa0417690 | MtrunA17_Chr5g0424651 | 50.222 | 225 | 69 | 8 | 1 | 188 | 18 | 236 | 1.80e-54 | 185 |
| Msa0417690 | MtrunA17_Chr5g0424501 | 82.500 | 40 | 7 | 0 | 50 | 89 | 8 | 47 | 1.98e-15 | 75.5 |
| Msa0417690 | MtrunA17_Chr4g0051191 | 63.462 | 52 | 18 | 1 | 50 | 100 | 48 | 99 | 7.71e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417690 | AT4G08500.1 | 36.364 | 231 | 93 | 6 | 11 | 188 | 26 | 255 | 4.03e-23 | 99.0 |
| Msa0417690 | AT4G08480.1 | 43.902 | 123 | 58 | 5 | 11 | 128 | 123 | 239 | 1.31e-16 | 79.7 |
Find 74 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAGAGTTTAGGACTTTC+TGG | 0.144459 | 3_2:-64971666 | Msa0417690:CDS |
| GTGAATGATGTGAGAGAATT+AGG | 0.270862 | 3_2:-64971531 | Msa0417690:CDS |
| AGTAGTAGTAGTGGTATTAA+TGG | 0.282493 | 3_2:-64971417 | Msa0417690:CDS |
| TTCACTTTACACTCGTTCTA+TGG | 0.295418 | 3_2:-64971748 | Msa0417690:CDS |
| GATCGAATTTGTAAGAGTTT+AGG | 0.304623 | 3_2:-64971675 | Msa0417690:CDS |
| TGCTATCCCTGCTGCTGCTT+GGG | 0.310218 | 3_2:-64971631 | Msa0417690:CDS |
| TCTTCTTTCGATGACTCTTC+TGG | 0.312116 | 3_2:-64971771 | Msa0417690:CDS |
| TGAGATTGTTGCTGGTCTTA+TGG | 0.314797 | 3_2:-64971190 | Msa0417690:CDS |
| TTTGGCTCCGGTTGGGGAAG+GGG | 0.325778 | 3_2:-64971304 | Msa0417690:CDS |
| GCATTGCGACGCTCGAGTTT+AGG | 0.330227 | 3_2:+64971831 | None:intergenic |
| ATAGGGATATGGTTAGGGTT+AGG | 0.340790 | 3_2:-64971485 | Msa0417690:CDS |
| TGAATGAGAAATGTGAAGAT+AGG | 0.341545 | 3_2:-64971503 | Msa0417690:CDS |
| TAGGGATATGGTTAGGGTTA+GGG | 0.351064 | 3_2:-64971484 | Msa0417690:CDS |
| GTGAAGATAGGGATATGGTT+AGG | 0.370355 | 3_2:-64971491 | Msa0417690:CDS |
| TGAAGGATTTGGCTCCGGTT+GGG | 0.376560 | 3_2:-64971311 | Msa0417690:CDS |
| CTTCACTCTCCTCCACTTCC+CGG | 0.381690 | 3_2:+64971265 | None:intergenic |
| TTGCTATCCCTGCTGCTGCT+TGG | 0.381923 | 3_2:-64971632 | Msa0417690:CDS |
| TGGACAGGAGAAAGATAATC+AGG | 0.385187 | 3_2:-64969814 | Msa0417690:intron |
| TCTTCTTCCCCTTCCCCAAC+CGG | 0.385753 | 3_2:+64971297 | None:intergenic |
| AGTGGGAAGAACATCAGAAT+TGG | 0.397757 | 3_2:+64971590 | None:intergenic |
| GCTTGATGAGCTTGATTTGA+AGG | 0.400798 | 3_2:-64971562 | Msa0417690:CDS |
| TTCCGTATTGAAGGAGTTGA+TGG | 0.419296 | 3_2:-64971705 | Msa0417690:CDS |
| GAAATGTGAAGATAGGGATA+TGG | 0.422904 | 3_2:-64971496 | Msa0417690:CDS |
| GAGAGTGAAGGTGAGGAAGT+TGG | 0.423875 | 3_2:-64971252 | Msa0417690:CDS |
| GGAGATACATTATTCGATCT+AGG | 0.427749 | 3_2:+64971111 | None:intergenic |
| AGATGATCCAGCGTCGTAAT+CGG | 0.436574 | 3_2:+64971797 | None:intergenic |
| GCCACCTGGGATGAGAGTTC+CGG | 0.439326 | 3_2:-64971370 | Msa0417690:CDS |
| TACCTTCTGTAGTGTCAGTA+AGG | 0.444828 | 3_2:+64969774 | None:intergenic |
| TGGTAGAGAAGAGGAGGTGG+TGG | 0.445258 | 3_2:-64971232 | Msa0417690:CDS |
| CGTACTAGCTTCCGTATTGA+AGG | 0.449990 | 3_2:-64971714 | Msa0417690:CDS |
| GAAGGATTTGGCTCCGGTTG+GGG | 0.453965 | 3_2:-64971310 | Msa0417690:CDS |
| AGGATTGATGAGATTGTTGC+TGG | 0.457925 | 3_2:-64971198 | Msa0417690:CDS |
| CTTCAATACGGAAGCTAGTA+CGG | 0.460414 | 3_2:+64971715 | None:intergenic |
| TTGAAGGATTTGGCTCCGGT+TGG | 0.468399 | 3_2:-64971312 | Msa0417690:CDS |
| AGAGGAGGTGGTGGATAATG+AGG | 0.471570 | 3_2:-64971223 | Msa0417690:CDS |
| GCTTGATTTGAAGGAGAAGA+AGG | 0.473078 | 3_2:-64971553 | Msa0417690:CDS |
| CCGATGATTAAGCCGCCACC+TGG | 0.473602 | 3_2:-64971384 | Msa0417690:CDS |
| GGTTGGGGAAGGGGAAGAAG+AGG | 0.475658 | 3_2:-64971295 | Msa0417690:CDS |
| GATTTGGCTCCGGTTGGGGA+AGG | 0.475659 | 3_2:-64971306 | Msa0417690:CDS |
| ATAGCTTCCCAAGCAGCAGC+AGG | 0.476599 | 3_2:+64971624 | None:intergenic |
| ATTTGGCTCCGGTTGGGGAA+GGG | 0.486760 | 3_2:-64971305 | Msa0417690:CDS |
| TGAAGATAGGGATATGGTTA+GGG | 0.487113 | 3_2:-64971490 | Msa0417690:CDS |
| GAATGAGAAATGTGAAGATA+GGG | 0.495407 | 3_2:-64971502 | Msa0417690:CDS |
| TAGGGTTAGGGTTAAAGATG+AGG | 0.512027 | 3_2:-64971472 | Msa0417690:CDS |
| TTGATAACACGTGTTCCACT+TGG | 0.512717 | 3_2:-64971341 | Msa0417690:CDS |
| AGTTGGTAGAGAAGAGGAGG+TGG | 0.513985 | 3_2:-64971235 | Msa0417690:CDS |
| TGATTCTTCTAGTACTGCTA+TGG | 0.523445 | 3_2:-64971136 | Msa0417690:CDS |
| TGAGGAAGTTGGTAGAGAAG+AGG | 0.526588 | 3_2:-64971241 | Msa0417690:CDS |
| AGCAGGGATAGCAAAATCCT+CGG | 0.529169 | 3_2:+64971641 | None:intergenic |
| CACCATCAACTCCTTCAATA+CGG | 0.536830 | 3_2:+64971703 | None:intergenic |
| GGAAGTTGGTAGAGAAGAGG+AGG | 0.537250 | 3_2:-64971238 | Msa0417690:CDS |
| AGTGGAGGAGAGTGAAGGTG+AGG | 0.539500 | 3_2:-64971259 | Msa0417690:CDS |
| CCAGGTGGCGGCTTAATCAT+CGG | 0.545523 | 3_2:+64971384 | None:intergenic |
| AAGTACACCGATTACGACGC+TGG | 0.549499 | 3_2:-64971804 | Msa0417690:CDS |
| TTCTGTAGTGTCAGTAAGGG+TGG | 0.565216 | 3_2:+64969778 | None:intergenic |
| GCAGGGATAGCAAAATCCTC+GGG | 0.567278 | 3_2:+64971642 | None:intergenic |
| GGAACTCTCATCCCAGGTGG+CGG | 0.582853 | 3_2:+64971372 | None:intergenic |
| CACGTGTTATCAACAACCAC+CGG | 0.587179 | 3_2:+64971351 | None:intergenic |
| TGATAACACGTGTTCCACTT+GGG | 0.588653 | 3_2:-64971340 | Msa0417690:CDS |
| ATCCTTCAAAAGATCCCAAG+TGG | 0.594119 | 3_2:+64971326 | None:intergenic |
| GTTGGGGAAGGGGAAGAAGA+GGG | 0.594380 | 3_2:-64971294 | Msa0417690:CDS |
| AGCTCATCAAGCTTCAAAGT+GGG | 0.598094 | 3_2:+64971573 | None:intergenic |
| ACCTTCTGTAGTGTCAGTAA+GGG | 0.598940 | 3_2:+64969775 | None:intergenic |
| CGATGATTAAGCCGCCACCT+GGG | 0.604089 | 3_2:-64971383 | Msa0417690:CDS |
| ACCTGGGATGAGAGTTCCGG+TGG | 0.605875 | 3_2:-64971367 | Msa0417690:CDS |
| ACCACCGGAACTCTCATCCC+AGG | 0.610818 | 3_2:+64971366 | None:intergenic |
| AAGCTCATCAAGCTTCAAAG+TGG | 0.612583 | 3_2:+64971572 | None:intergenic |
| CGGGAAGTGGAGGAGAGTGA+AGG | 0.616922 | 3_2:-64971264 | Msa0417690:CDS |
| TTTAGGACTTTCTGGACCCG+AGG | 0.636314 | 3_2:-64971658 | Msa0417690:CDS |
| GGACAGGAGAAAGATAATCA+GGG | 0.642672 | 3_2:-64969813 | Msa0417690:intron |
| AGGTGGTGGATAATGAGGCG+AGG | 0.647698 | 3_2:-64971218 | Msa0417690:CDS |
| TAGCTTCCCAAGCAGCAGCA+GGG | 0.656089 | 3_2:+64971625 | None:intergenic |
| GGTGGCGGCTTAATCATCGG+TGG | 0.659281 | 3_2:+64971387 | None:intergenic |
| ACCGGAACTCTCATCCCAGG+TGG | 0.716056 | 3_2:+64971369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTATTTTTTACAG+AGG | + | chr3_2:64971080-64971099 | None:intergenic | 10.0% |
| !!! | AAATAATTTATTTTTTACAG+AGG | + | chr3_2:64971080-64971099 | None:intergenic | 10.0% |
| !! | ATATATATATACACAAAAGA+TGG | - | chr3_2:64971013-64971032 | Msa0417690:intron | 15.0% |
| !! | ATATATATATACACAAAAGA+TGG | - | chr3_2:64971013-64971032 | Msa0417690:intron | 15.0% |
| !!! | TTAAATTTCTAGTACACATT+TGG | - | chr3_2:64970743-64970762 | Msa0417690:intron | 20.0% |
| !!! | TTAAATTTCTAGTACACATT+TGG | - | chr3_2:64970743-64970762 | Msa0417690:intron | 20.0% |
| ! | NNNNNNNNNATTCTCCCGTT+TGG | + | chr3_2:64970559-64970578 | None:intergenic | 25.0% |
| !!! | GTTCATCTTTGATTGTTTTT+AGG | + | chr3_2:64970693-64970712 | None:intergenic | 25.0% |
| ! | CAATCAAAGATGAACAAAAA+TGG | - | chr3_2:64970698-64970717 | Msa0417690:intron | 25.0% |
| !! | TTAGTCTATGCTTAATGTTT+TGG | + | chr3_2:64970940-64970959 | None:intergenic | 25.0% |
| !!! | ACAGAGGTACATTTTTTTTA+GGG | + | chr3_2:64971064-64971083 | None:intergenic | 25.0% |
| !!! | TACAGAGGTACATTTTTTTT+AGG | + | chr3_2:64971065-64971084 | None:intergenic | 25.0% |
| ! | ATATTTAGCATAGAACATCA+AGG | - | chr3_2:64971226-64971245 | Msa0417690:CDS | 25.0% |
| !! | ATATGCAATGATTTTCCTAA+TGG | - | chr3_2:64971464-64971483 | Msa0417690:CDS | 25.0% |
| ! | TAGTCTGAACTATTTAATAG+TGG | - | chr3_2:64971694-64971713 | Msa0417690:CDS | 25.0% |
| ! | NNNNNNNNNATTCTCCCGTT+TGG | + | chr3_2:64970559-64970578 | None:intergenic | 25.0% |
| !!! | GTTCATCTTTGATTGTTTTT+AGG | + | chr3_2:64970693-64970712 | None:intergenic | 25.0% |
| ! | CAATCAAAGATGAACAAAAA+TGG | - | chr3_2:64970698-64970717 | Msa0417690:intron | 25.0% |
| !! | TTAGTCTATGCTTAATGTTT+TGG | + | chr3_2:64970940-64970959 | None:intergenic | 25.0% |
| !!! | ACAGAGGTACATTTTTTTTA+GGG | + | chr3_2:64971064-64971083 | None:intergenic | 25.0% |
| !!! | TACAGAGGTACATTTTTTTT+AGG | + | chr3_2:64971065-64971084 | None:intergenic | 25.0% |
| ! | ATATTTAGCATAGAACATCA+AGG | - | chr3_2:64971226-64971245 | Msa0417690:CDS | 25.0% |
| !! | ATATGCAATGATTTTCCTAA+TGG | - | chr3_2:64971464-64971483 | Msa0417690:CDS | 25.0% |
| ! | TAGTCTGAACTATTTAATAG+TGG | - | chr3_2:64971694-64971713 | Msa0417690:CDS | 25.0% |
| GATCGAATTTGTAAGAGTTT+AGG | - | chr3_2:64969971-64969990 | Msa0417690:intron | 30.0% | |
| TGAATGAGAAATGTGAAGAT+AGG | - | chr3_2:64970143-64970162 | Msa0417690:intron | 30.0% | |
| GAATGAGAAATGTGAAGATA+GGG | - | chr3_2:64970144-64970163 | Msa0417690:intron | 30.0% | |
| AGTAGTAGTAGTGGTATTAA+TGG | - | chr3_2:64970229-64970248 | Msa0417690:intron | 30.0% | |
| TCGAATAATGTATCTCCAAA+CGG | - | chr3_2:64970541-64970560 | Msa0417690:intron | 30.0% | |
| ! | ATTTTTCTTGTTGCATGAGT+CGG | - | chr3_2:64970845-64970864 | Msa0417690:intron | 30.0% |
| !!! | CAGAGGTACATTTTTTTTAG+GGG | + | chr3_2:64971063-64971082 | None:intergenic | 30.0% |
| TTTAGTATGCACAACAAGAA+TGG | - | chr3_2:64971097-64971116 | Msa0417690:intron | 30.0% | |
| AGAGAACCAATTTATCAACT+TGG | + | chr3_2:64971259-64971278 | None:intergenic | 30.0% | |
| !! | TAGATTTTTAAGCACTGCTT+CGG | + | chr3_2:64971302-64971321 | None:intergenic | 30.0% |
| ! | TTACTCTGCATATTGTTTTC+TGG | + | chr3_2:64971406-64971425 | None:intergenic | 30.0% |
| GAAAATCATTGCATATGAGT+TGG | + | chr3_2:64971460-64971479 | None:intergenic | 30.0% | |
| ! | TTATGTTGTTTGCATCCATT+AGG | + | chr3_2:64971482-64971501 | None:intergenic | 30.0% |
| CAAAGAAGCAGTAAGAAAAT+TGG | - | chr3_2:64971654-64971673 | Msa0417690:CDS | 30.0% | |
| CAATATTCATAATGTCCACT+CGG | + | chr3_2:64971799-64971818 | None:intergenic | 30.0% | |
| GATCGAATTTGTAAGAGTTT+AGG | - | chr3_2:64969971-64969990 | Msa0417690:intron | 30.0% | |
| TGAATGAGAAATGTGAAGAT+AGG | - | chr3_2:64970143-64970162 | Msa0417690:intron | 30.0% | |
| GAATGAGAAATGTGAAGATA+GGG | - | chr3_2:64970144-64970163 | Msa0417690:intron | 30.0% | |
| AGTAGTAGTAGTGGTATTAA+TGG | - | chr3_2:64970229-64970248 | Msa0417690:intron | 30.0% | |
| TCGAATAATGTATCTCCAAA+CGG | - | chr3_2:64970541-64970560 | Msa0417690:intron | 30.0% | |
| ! | ATTTTTCTTGTTGCATGAGT+CGG | - | chr3_2:64970845-64970864 | Msa0417690:intron | 30.0% |
| !!! | CAGAGGTACATTTTTTTTAG+GGG | + | chr3_2:64971063-64971082 | None:intergenic | 30.0% |
| TTTAGTATGCACAACAAGAA+TGG | - | chr3_2:64971097-64971116 | Msa0417690:intron | 30.0% | |
| AGAGAACCAATTTATCAACT+TGG | + | chr3_2:64971259-64971278 | None:intergenic | 30.0% | |
| !! | TAGATTTTTAAGCACTGCTT+CGG | + | chr3_2:64971302-64971321 | None:intergenic | 30.0% |
| ! | TTACTCTGCATATTGTTTTC+TGG | + | chr3_2:64971406-64971425 | None:intergenic | 30.0% |
| GAAAATCATTGCATATGAGT+TGG | + | chr3_2:64971460-64971479 | None:intergenic | 30.0% | |
| ! | TTATGTTGTTTGCATCCATT+AGG | + | chr3_2:64971482-64971501 | None:intergenic | 30.0% |
| CAAAGAAGCAGTAAGAAAAT+TGG | - | chr3_2:64971654-64971673 | Msa0417690:CDS | 30.0% | |
| CAATATTCATAATGTCCACT+CGG | + | chr3_2:64971799-64971818 | None:intergenic | 30.0% | |
| TTCACTTTACACTCGTTCTA+TGG | - | chr3_2:64969898-64969917 | Msa0417690:intron | 35.0% | |
| ! | TGTAAGAGTTTAGGACTTTC+TGG | - | chr3_2:64969980-64969999 | Msa0417690:intron | 35.0% |
| GTGAATGATGTGAGAGAATT+AGG | - | chr3_2:64970115-64970134 | Msa0417690:intron | 35.0% | |
| GAAATGTGAAGATAGGGATA+TGG | - | chr3_2:64970150-64970169 | Msa0417690:intron | 35.0% | |
| TGAAGATAGGGATATGGTTA+GGG | - | chr3_2:64970156-64970175 | Msa0417690:intron | 35.0% | |
| GTTGTTAGTAGTAGTAGTAG+TGG | - | chr3_2:64970220-64970239 | Msa0417690:intron | 35.0% | |
| !! | TTGGGATCTTTTGAAGGATT+TGG | - | chr3_2:64970324-64970343 | Msa0417690:intron | 35.0% |
| TGATTCTTCTAGTACTGCTA+TGG | - | chr3_2:64970510-64970529 | Msa0417690:intron | 35.0% | |
| GGAGATACATTATTCGATCT+AGG | + | chr3_2:64970538-64970557 | None:intergenic | 35.0% | |
| CGAATAATGTATCTCCAAAC+GGG | - | chr3_2:64970542-64970561 | Msa0417690:intron | 35.0% | |
| ! | AAAGTTCTAGTGCAATTGAG+AGG | - | chr3_2:64970772-64970791 | Msa0417690:intron | 35.0% |
| !! | GCATGTGTCAGTTTTATGAA+TGG | - | chr3_2:64970895-64970914 | Msa0417690:intron | 35.0% |
| !!! | AGGTACATTTTTTTTAGGGG+AGG | + | chr3_2:64971060-64971079 | None:intergenic | 35.0% |
| ! | TTTGAAACAGTGGCAAGAAA+AGG | + | chr3_2:64971127-64971146 | None:intergenic | 35.0% |
| ! | GCCATGTACATTCTTTTCAT+CGG | - | chr3_2:64971153-64971172 | Msa0417690:CDS | 35.0% |
| ACCGATGAAAAGAATGTACA+TGG | + | chr3_2:64971157-64971176 | None:intergenic | 35.0% | |
| AGCAACAATTGCTGCAAAAA+TGG | - | chr3_2:64971366-64971385 | Msa0417690:CDS | 35.0% | |
| TCTAATAACGTAGACGATGT+TGG | + | chr3_2:64971587-64971606 | None:intergenic | 35.0% | |
| CGTGAAAGAAAAAAAAGACC+AGG | - | chr3_2:64971759-64971778 | Msa0417690:CDS | 35.0% | |
| AAGAAAAAAAAGACCAGGAC+TGG | - | chr3_2:64971764-64971783 | Msa0417690:CDS | 35.0% | |
| ATTATCTTTCTCCTGTCCAA+GGG | + | chr3_2:64971831-64971850 | None:intergenic | 35.0% | |
| TTCACTTTACACTCGTTCTA+TGG | - | chr3_2:64969898-64969917 | Msa0417690:intron | 35.0% | |
| ! | TGTAAGAGTTTAGGACTTTC+TGG | - | chr3_2:64969980-64969999 | Msa0417690:intron | 35.0% |
| GTGAATGATGTGAGAGAATT+AGG | - | chr3_2:64970115-64970134 | Msa0417690:intron | 35.0% | |
| GAAATGTGAAGATAGGGATA+TGG | - | chr3_2:64970150-64970169 | Msa0417690:intron | 35.0% | |
| TGAAGATAGGGATATGGTTA+GGG | - | chr3_2:64970156-64970175 | Msa0417690:intron | 35.0% | |
| GTTGTTAGTAGTAGTAGTAG+TGG | - | chr3_2:64970220-64970239 | Msa0417690:intron | 35.0% | |
| !! | TTGGGATCTTTTGAAGGATT+TGG | - | chr3_2:64970324-64970343 | Msa0417690:intron | 35.0% |
| TGATTCTTCTAGTACTGCTA+TGG | - | chr3_2:64970510-64970529 | Msa0417690:intron | 35.0% | |
| GGAGATACATTATTCGATCT+AGG | + | chr3_2:64970538-64970557 | None:intergenic | 35.0% | |
| CGAATAATGTATCTCCAAAC+GGG | - | chr3_2:64970542-64970561 | Msa0417690:intron | 35.0% | |
| ! | AAAGTTCTAGTGCAATTGAG+AGG | - | chr3_2:64970772-64970791 | Msa0417690:intron | 35.0% |
| !! | GCATGTGTCAGTTTTATGAA+TGG | - | chr3_2:64970895-64970914 | Msa0417690:intron | 35.0% |
| !!! | AGGTACATTTTTTTTAGGGG+AGG | + | chr3_2:64971060-64971079 | None:intergenic | 35.0% |
| ! | TTTGAAACAGTGGCAAGAAA+AGG | + | chr3_2:64971127-64971146 | None:intergenic | 35.0% |
| ! | GCCATGTACATTCTTTTCAT+CGG | - | chr3_2:64971153-64971172 | Msa0417690:CDS | 35.0% |
| ACCGATGAAAAGAATGTACA+TGG | + | chr3_2:64971157-64971176 | None:intergenic | 35.0% | |
| AGCAACAATTGCTGCAAAAA+TGG | - | chr3_2:64971366-64971385 | Msa0417690:CDS | 35.0% | |
| TCTAATAACGTAGACGATGT+TGG | + | chr3_2:64971587-64971606 | None:intergenic | 35.0% | |
| CGTGAAAGAAAAAAAAGACC+AGG | - | chr3_2:64971759-64971778 | Msa0417690:CDS | 35.0% | |
| AAGAAAAAAAAGACCAGGAC+TGG | - | chr3_2:64971764-64971783 | Msa0417690:CDS | 35.0% | |
| ATTATCTTTCTCCTGTCCAA+GGG | + | chr3_2:64971831-64971850 | None:intergenic | 35.0% | |
| TCTTCTTTCGATGACTCTTC+TGG | - | chr3_2:64969875-64969894 | Msa0417690:intron | 40.0% | |
| CTTCAATACGGAAGCTAGTA+CGG | + | chr3_2:64969934-64969953 | None:intergenic | 40.0% | |
| TTCCGTATTGAAGGAGTTGA+TGG | - | chr3_2:64969941-64969960 | Msa0417690:intron | 40.0% | |
| CACCATCAACTCCTTCAATA+CGG | + | chr3_2:64969946-64969965 | None:intergenic | 40.0% | |
| AGTGGGAAGAACATCAGAAT+TGG | + | chr3_2:64970059-64970078 | None:intergenic | 40.0% | |
| AGCTCATCAAGCTTCAAAGT+GGG | + | chr3_2:64970076-64970095 | None:intergenic | 40.0% | |
| AAGCTCATCAAGCTTCAAAG+TGG | + | chr3_2:64970077-64970096 | None:intergenic | 40.0% | |
| ! | GCTTGATGAGCTTGATTTGA+AGG | - | chr3_2:64970084-64970103 | Msa0417690:intron | 40.0% |
| ! | GCTTGATTTGAAGGAGAAGA+AGG | - | chr3_2:64970093-64970112 | Msa0417690:intron | 40.0% |
| GTGAAGATAGGGATATGGTT+AGG | - | chr3_2:64970155-64970174 | Msa0417690:intron | 40.0% | |
| ATAGGGATATGGTTAGGGTT+AGG | - | chr3_2:64970161-64970180 | Msa0417690:intron | 40.0% | |
| TAGGGATATGGTTAGGGTTA+GGG | - | chr3_2:64970162-64970181 | Msa0417690:intron | 40.0% | |
| TAGGGTTAGGGTTAAAGATG+AGG | - | chr3_2:64970174-64970193 | Msa0417690:intron | 40.0% | |
| ! | TTGATAACACGTGTTCCACT+TGG | - | chr3_2:64970305-64970324 | Msa0417690:intron | 40.0% |
| TGATAACACGTGTTCCACTT+GGG | - | chr3_2:64970306-64970325 | Msa0417690:intron | 40.0% | |
| ! | TTCCACTTGGGATCTTTTGA+AGG | - | chr3_2:64970318-64970337 | Msa0417690:intron | 40.0% |
| ATCCTTCAAAAGATCCCAAG+TGG | + | chr3_2:64970323-64970342 | None:intergenic | 40.0% | |
| !! | TCTTTTGAAGGATTTGGCTC+CGG | - | chr3_2:64970330-64970349 | Msa0417690:intron | 40.0% |
| AGGATTGATGAGATTGTTGC+TGG | - | chr3_2:64970448-64970467 | Msa0417690:intron | 40.0% | |
| !! | TGAGATTGTTGCTGGTCTTA+TGG | - | chr3_2:64970456-64970475 | Msa0417690:intron | 40.0% |
| TTCTAGTGCAATTGAGAGGA+TGG | - | chr3_2:64970776-64970795 | Msa0417690:intron | 40.0% | |
| !!! | TGGCTTAGCTTTTGAAACAG+TGG | + | chr3_2:64971137-64971156 | None:intergenic | 40.0% |
| ! | TTCATCGGTTAGCTCATTTG+AGG | - | chr3_2:64971168-64971187 | Msa0417690:CDS | 40.0% |
| ! | TCATCGGTTAGCTCATTTGA+GGG | - | chr3_2:64971169-64971188 | Msa0417690:CDS | 40.0% |
| TAGCATAGAACATCAAGGCA+CGG | - | chr3_2:64971231-64971250 | Msa0417690:CDS | 40.0% | |
| !! | ACGGTGCCAAGTTGATAAAT+TGG | - | chr3_2:64971250-64971269 | Msa0417690:CDS | 40.0% |
| !! | TTGTTGCTTTCCTCTTGTTG+TGG | + | chr3_2:64971354-64971373 | None:intergenic | 40.0% |
| !!! | TTGTTTTCTGGAGTTGACCT+GGG | + | chr3_2:64971394-64971413 | None:intergenic | 40.0% |
| !!! | ATTGTTTTCTGGAGTTGACC+TGG | + | chr3_2:64971395-64971414 | None:intergenic | 40.0% |
| !!! | TCGGATTTTAATTCCAGTCC+TGG | + | chr3_2:64971780-64971799 | None:intergenic | 40.0% |
| GACTGGAATTAAAATCCGAG+TGG | - | chr3_2:64971781-64971800 | Msa0417690:CDS | 40.0% | |
| AATATTGAAGAGCTCTCCCT+TGG | - | chr3_2:64971812-64971831 | Msa0417690:CDS | 40.0% | |
| GATTATCTTTCTCCTGTCCA+AGG | + | chr3_2:64971832-64971851 | None:intergenic | 40.0% | |
| TGGACAGGAGAAAGATAATC+AGG | - | chr3_2:64971832-64971851 | Msa0417690:CDS | 40.0% | |
| GGACAGGAGAAAGATAATCA+GGG | - | chr3_2:64971833-64971852 | Msa0417690:CDS | 40.0% | |
| TCTTCTTTCGATGACTCTTC+TGG | - | chr3_2:64969875-64969894 | Msa0417690:intron | 40.0% | |
| CTTCAATACGGAAGCTAGTA+CGG | + | chr3_2:64969934-64969953 | None:intergenic | 40.0% | |
| TTCCGTATTGAAGGAGTTGA+TGG | - | chr3_2:64969941-64969960 | Msa0417690:intron | 40.0% | |
| CACCATCAACTCCTTCAATA+CGG | + | chr3_2:64969946-64969965 | None:intergenic | 40.0% | |
| AGTGGGAAGAACATCAGAAT+TGG | + | chr3_2:64970059-64970078 | None:intergenic | 40.0% | |
| AGCTCATCAAGCTTCAAAGT+GGG | + | chr3_2:64970076-64970095 | None:intergenic | 40.0% | |
| AAGCTCATCAAGCTTCAAAG+TGG | + | chr3_2:64970077-64970096 | None:intergenic | 40.0% | |
| ! | GCTTGATGAGCTTGATTTGA+AGG | - | chr3_2:64970084-64970103 | Msa0417690:intron | 40.0% |
| ! | GCTTGATTTGAAGGAGAAGA+AGG | - | chr3_2:64970093-64970112 | Msa0417690:intron | 40.0% |
| GTGAAGATAGGGATATGGTT+AGG | - | chr3_2:64970155-64970174 | Msa0417690:intron | 40.0% | |
| ATAGGGATATGGTTAGGGTT+AGG | - | chr3_2:64970161-64970180 | Msa0417690:intron | 40.0% | |
| TAGGGATATGGTTAGGGTTA+GGG | - | chr3_2:64970162-64970181 | Msa0417690:intron | 40.0% | |
| TAGGGTTAGGGTTAAAGATG+AGG | - | chr3_2:64970174-64970193 | Msa0417690:intron | 40.0% | |
| ! | TTGATAACACGTGTTCCACT+TGG | - | chr3_2:64970305-64970324 | Msa0417690:intron | 40.0% |
| TGATAACACGTGTTCCACTT+GGG | - | chr3_2:64970306-64970325 | Msa0417690:intron | 40.0% | |
| ! | TTCCACTTGGGATCTTTTGA+AGG | - | chr3_2:64970318-64970337 | Msa0417690:intron | 40.0% |
| ATCCTTCAAAAGATCCCAAG+TGG | + | chr3_2:64970323-64970342 | None:intergenic | 40.0% | |
| !! | TCTTTTGAAGGATTTGGCTC+CGG | - | chr3_2:64970330-64970349 | Msa0417690:intron | 40.0% |
| AGGATTGATGAGATTGTTGC+TGG | - | chr3_2:64970448-64970467 | Msa0417690:intron | 40.0% | |
| !! | TGAGATTGTTGCTGGTCTTA+TGG | - | chr3_2:64970456-64970475 | Msa0417690:intron | 40.0% |
| TTCTAGTGCAATTGAGAGGA+TGG | - | chr3_2:64970776-64970795 | Msa0417690:intron | 40.0% | |
| !!! | TGGCTTAGCTTTTGAAACAG+TGG | + | chr3_2:64971137-64971156 | None:intergenic | 40.0% |
| ! | TTCATCGGTTAGCTCATTTG+AGG | - | chr3_2:64971168-64971187 | Msa0417690:CDS | 40.0% |
| ! | TCATCGGTTAGCTCATTTGA+GGG | - | chr3_2:64971169-64971188 | Msa0417690:CDS | 40.0% |
| TAGCATAGAACATCAAGGCA+CGG | - | chr3_2:64971231-64971250 | Msa0417690:CDS | 40.0% | |
| !! | ACGGTGCCAAGTTGATAAAT+TGG | - | chr3_2:64971250-64971269 | Msa0417690:CDS | 40.0% |
| !! | TTGTTGCTTTCCTCTTGTTG+TGG | + | chr3_2:64971354-64971373 | None:intergenic | 40.0% |
| !!! | TTGTTTTCTGGAGTTGACCT+GGG | + | chr3_2:64971394-64971413 | None:intergenic | 40.0% |
| !!! | ATTGTTTTCTGGAGTTGACC+TGG | + | chr3_2:64971395-64971414 | None:intergenic | 40.0% |
| !!! | TCGGATTTTAATTCCAGTCC+TGG | + | chr3_2:64971780-64971799 | None:intergenic | 40.0% |
| GACTGGAATTAAAATCCGAG+TGG | - | chr3_2:64971781-64971800 | Msa0417690:CDS | 40.0% | |
| AATATTGAAGAGCTCTCCCT+TGG | - | chr3_2:64971812-64971831 | Msa0417690:CDS | 40.0% | |
| GATTATCTTTCTCCTGTCCA+AGG | + | chr3_2:64971832-64971851 | None:intergenic | 40.0% | |
| TGGACAGGAGAAAGATAATC+AGG | - | chr3_2:64971832-64971851 | Msa0417690:CDS | 40.0% | |
| GGACAGGAGAAAGATAATCA+GGG | - | chr3_2:64971833-64971852 | Msa0417690:CDS | 40.0% | |
| AGATGATCCAGCGTCGTAAT+CGG | + | chr3_2:64969852-64969871 | None:intergenic | 45.0% | |
| ! | CGTACTAGCTTCCGTATTGA+AGG | - | chr3_2:64969932-64969951 | Msa0417690:intron | 45.0% |
| AGCAGGGATAGCAAAATCCT+CGG | + | chr3_2:64970008-64970027 | None:intergenic | 45.0% | |
| CACGTGTTATCAACAACCAC+CGG | + | chr3_2:64970298-64970317 | None:intergenic | 45.0% | |
| !! | TGAGGAAGTTGGTAGAGAAG+AGG | - | chr3_2:64970405-64970424 | Msa0417690:intron | 45.0% |
| ! | CATCGGTTAGCTCATTTGAG+GGG | - | chr3_2:64971170-64971189 | Msa0417690:CDS | 45.0% |
| ACTCTGAATGCCACAACAAG+AGG | - | chr3_2:64971341-64971360 | Msa0417690:CDS | 45.0% | |
| TTGCTGCAAAAATGGAACCC+AGG | - | chr3_2:64971374-64971393 | Msa0417690:CDS | 45.0% | |
| AGATGATCCAGCGTCGTAAT+CGG | + | chr3_2:64969852-64969871 | None:intergenic | 45.0% | |
| ! | CGTACTAGCTTCCGTATTGA+AGG | - | chr3_2:64969932-64969951 | Msa0417690:intron | 45.0% |
| AGCAGGGATAGCAAAATCCT+CGG | + | chr3_2:64970008-64970027 | None:intergenic | 45.0% | |
| CACGTGTTATCAACAACCAC+CGG | + | chr3_2:64970298-64970317 | None:intergenic | 45.0% | |
| !! | TGAGGAAGTTGGTAGAGAAG+AGG | - | chr3_2:64970405-64970424 | Msa0417690:intron | 45.0% |
| ! | CATCGGTTAGCTCATTTGAG+GGG | - | chr3_2:64971170-64971189 | Msa0417690:CDS | 45.0% |
| ACTCTGAATGCCACAACAAG+AGG | - | chr3_2:64971341-64971360 | Msa0417690:CDS | 45.0% | |
| TTGCTGCAAAAATGGAACCC+AGG | - | chr3_2:64971374-64971393 | Msa0417690:CDS | 45.0% | |
| !! | TTATATTTATATAAACAAAA+TGG | + | chr3_2:64971557-64971576 | None:intergenic | 5.0% |
| !! | TTATATTTATATAAACAAAA+TGG | + | chr3_2:64971557-64971576 | None:intergenic | 5.0% |
| ! | AAGTACACCGATTACGACGC+TGG | - | chr3_2:64969842-64969861 | Msa0417690:intron | 50.0% |
| ! | TTTAGGACTTTCTGGACCCG+AGG | - | chr3_2:64969988-64970007 | Msa0417690:intron | 50.0% |
| GCAGGGATAGCAAAATCCTC+GGG | + | chr3_2:64970007-64970026 | None:intergenic | 50.0% | |
| ! | TTGAAGGATTTGGCTCCGGT+TGG | - | chr3_2:64970334-64970353 | Msa0417690:intron | 50.0% |
| ! | TGAAGGATTTGGCTCCGGTT+GGG | - | chr3_2:64970335-64970354 | Msa0417690:intron | 50.0% |
| !! | GGGAAGAAGAGGGTTTTGAC+CGG | - | chr3_2:64970362-64970381 | Msa0417690:intron | 50.0% |
| !! | GGAAGAAGAGGGTTTTGACC+GGG | - | chr3_2:64970363-64970382 | Msa0417690:intron | 50.0% |
| GAGAGTGAAGGTGAGGAAGT+TGG | - | chr3_2:64970394-64970413 | Msa0417690:intron | 50.0% | |
| !! | GGAAGTTGGTAGAGAAGAGG+AGG | - | chr3_2:64970408-64970427 | Msa0417690:intron | 50.0% |
| !! | AGTTGGTAGAGAAGAGGAGG+TGG | - | chr3_2:64970411-64970430 | Msa0417690:intron | 50.0% |
| !! | AGAGGAGGTGGTGGATAATG+AGG | - | chr3_2:64970423-64970442 | Msa0417690:intron | 50.0% |
| ! | GGTTAGCTCATTTGAGGGGA+AGG | - | chr3_2:64971174-64971193 | Msa0417690:CDS | 50.0% |
| TAGCTCATTTGAGGGGAAGG+CGG | - | chr3_2:64971177-64971196 | Msa0417690:CDS | 50.0% | |
| CTGCTTCGGATCAAGTGATG+TGG | + | chr3_2:64971288-64971307 | None:intergenic | 50.0% | |
| ! | AAGTACACCGATTACGACGC+TGG | - | chr3_2:64969842-64969861 | Msa0417690:intron | 50.0% |
| ! | TTTAGGACTTTCTGGACCCG+AGG | - | chr3_2:64969988-64970007 | Msa0417690:intron | 50.0% |
| GCAGGGATAGCAAAATCCTC+GGG | + | chr3_2:64970007-64970026 | None:intergenic | 50.0% | |
| ! | TTGAAGGATTTGGCTCCGGT+TGG | - | chr3_2:64970334-64970353 | Msa0417690:intron | 50.0% |
| ! | TGAAGGATTTGGCTCCGGTT+GGG | - | chr3_2:64970335-64970354 | Msa0417690:intron | 50.0% |
| !! | GGGAAGAAGAGGGTTTTGAC+CGG | - | chr3_2:64970362-64970381 | Msa0417690:intron | 50.0% |
| !! | GGAAGAAGAGGGTTTTGACC+GGG | - | chr3_2:64970363-64970382 | Msa0417690:intron | 50.0% |
| GAGAGTGAAGGTGAGGAAGT+TGG | - | chr3_2:64970394-64970413 | Msa0417690:intron | 50.0% | |
| !! | GGAAGTTGGTAGAGAAGAGG+AGG | - | chr3_2:64970408-64970427 | Msa0417690:intron | 50.0% |
| !! | AGTTGGTAGAGAAGAGGAGG+TGG | - | chr3_2:64970411-64970430 | Msa0417690:intron | 50.0% |
| !! | AGAGGAGGTGGTGGATAATG+AGG | - | chr3_2:64970423-64970442 | Msa0417690:intron | 50.0% |
| ! | GGTTAGCTCATTTGAGGGGA+AGG | - | chr3_2:64971174-64971193 | Msa0417690:CDS | 50.0% |
| TAGCTCATTTGAGGGGAAGG+CGG | - | chr3_2:64971177-64971196 | Msa0417690:CDS | 50.0% | |
| CTGCTTCGGATCAAGTGATG+TGG | + | chr3_2:64971288-64971307 | None:intergenic | 50.0% | |
| GCATTGCGACGCTCGAGTTT+AGG | + | chr3_2:64969818-64969837 | None:intergenic | 55.0% | |
| TTGCTATCCCTGCTGCTGCT+TGG | - | chr3_2:64970014-64970033 | Msa0417690:intron | 55.0% | |
| ! | TGCTATCCCTGCTGCTGCTT+GGG | - | chr3_2:64970015-64970034 | Msa0417690:intron | 55.0% |
| TAGCTTCCCAAGCAGCAGCA+GGG | + | chr3_2:64970024-64970043 | None:intergenic | 55.0% | |
| ATAGCTTCCCAAGCAGCAGC+AGG | + | chr3_2:64970025-64970044 | None:intergenic | 55.0% | |
| ! | CCAGGTGGCGGCTTAATCAT+CGG | + | chr3_2:64970265-64970284 | None:intergenic | 55.0% |
| CGATGATTAAGCCGCCACCT+GGG | - | chr3_2:64970263-64970282 | Msa0417690:intron | 55.0% | |
| ! | GAAGGATTTGGCTCCGGTTG+GGG | - | chr3_2:64970336-64970355 | Msa0417690:intron | 55.0% |
| ! | ATTTGGCTCCGGTTGGGGAA+GGG | - | chr3_2:64970341-64970360 | Msa0417690:intron | 55.0% |
| TCTTCTTCCCCTTCCCCAAC+CGG | + | chr3_2:64970352-64970371 | None:intergenic | 55.0% | |
| GTTGGGGAAGGGGAAGAAGA+GGG | - | chr3_2:64970352-64970371 | Msa0417690:intron | 55.0% | |
| !! | AGAGGGTTTTGACCGGGAAG+TGG | - | chr3_2:64970369-64970388 | Msa0417690:intron | 55.0% |
| CTTCACTCTCCTCCACTTCC+CGG | + | chr3_2:64970384-64970403 | None:intergenic | 55.0% | |
| AGTGGAGGAGAGTGAAGGTG+AGG | - | chr3_2:64970387-64970406 | Msa0417690:intron | 55.0% | |
| TGGTAGAGAAGAGGAGGTGG+TGG | - | chr3_2:64970414-64970433 | Msa0417690:intron | 55.0% | |
| !! | AGGTGGTGGATAATGAGGCG+AGG | - | chr3_2:64970428-64970447 | Msa0417690:intron | 55.0% |
| TGAAGAGCTCTCCCTTGGAC+AGG | - | chr3_2:64971817-64971836 | Msa0417690:CDS | 55.0% | |
| GCATTGCGACGCTCGAGTTT+AGG | + | chr3_2:64969818-64969837 | None:intergenic | 55.0% | |
| TTGCTATCCCTGCTGCTGCT+TGG | - | chr3_2:64970014-64970033 | Msa0417690:intron | 55.0% | |
| ! | TGCTATCCCTGCTGCTGCTT+GGG | - | chr3_2:64970015-64970034 | Msa0417690:intron | 55.0% |
| TAGCTTCCCAAGCAGCAGCA+GGG | + | chr3_2:64970024-64970043 | None:intergenic | 55.0% | |
| ATAGCTTCCCAAGCAGCAGC+AGG | + | chr3_2:64970025-64970044 | None:intergenic | 55.0% | |
| ! | CCAGGTGGCGGCTTAATCAT+CGG | + | chr3_2:64970265-64970284 | None:intergenic | 55.0% |
| CGATGATTAAGCCGCCACCT+GGG | - | chr3_2:64970263-64970282 | Msa0417690:intron | 55.0% | |
| ! | GAAGGATTTGGCTCCGGTTG+GGG | - | chr3_2:64970336-64970355 | Msa0417690:intron | 55.0% |
| ! | ATTTGGCTCCGGTTGGGGAA+GGG | - | chr3_2:64970341-64970360 | Msa0417690:intron | 55.0% |
| TCTTCTTCCCCTTCCCCAAC+CGG | + | chr3_2:64970352-64970371 | None:intergenic | 55.0% | |
| GTTGGGGAAGGGGAAGAAGA+GGG | - | chr3_2:64970352-64970371 | Msa0417690:intron | 55.0% | |
| !! | AGAGGGTTTTGACCGGGAAG+TGG | - | chr3_2:64970369-64970388 | Msa0417690:intron | 55.0% |
| CTTCACTCTCCTCCACTTCC+CGG | + | chr3_2:64970384-64970403 | None:intergenic | 55.0% | |
| AGTGGAGGAGAGTGAAGGTG+AGG | - | chr3_2:64970387-64970406 | Msa0417690:intron | 55.0% | |
| TGGTAGAGAAGAGGAGGTGG+TGG | - | chr3_2:64970414-64970433 | Msa0417690:intron | 55.0% | |
| !! | AGGTGGTGGATAATGAGGCG+AGG | - | chr3_2:64970428-64970447 | Msa0417690:intron | 55.0% |
| TGAAGAGCTCTCCCTTGGAC+AGG | - | chr3_2:64971817-64971836 | Msa0417690:CDS | 55.0% | |
| ! | GGTGGCGGCTTAATCATCGG+TGG | + | chr3_2:64970262-64970281 | None:intergenic | 60.0% |
| CCGATGATTAAGCCGCCACC+TGG | - | chr3_2:64970262-64970281 | Msa0417690:intron | 60.0% | |
| GGAACTCTCATCCCAGGTGG+CGG | + | chr3_2:64970277-64970296 | None:intergenic | 60.0% | |
| GCCACCTGGGATGAGAGTTC+CGG | - | chr3_2:64970276-64970295 | Msa0417690:intron | 60.0% | |
| ACCGGAACTCTCATCCCAGG+TGG | + | chr3_2:64970280-64970299 | None:intergenic | 60.0% | |
| ACCTGGGATGAGAGTTCCGG+TGG | - | chr3_2:64970279-64970298 | Msa0417690:intron | 60.0% | |
| ACCACCGGAACTCTCATCCC+AGG | + | chr3_2:64970283-64970302 | None:intergenic | 60.0% | |
| ! | GATTTGGCTCCGGTTGGGGA+AGG | - | chr3_2:64970340-64970359 | Msa0417690:intron | 60.0% |
| ! | TTTGGCTCCGGTTGGGGAAG+GGG | - | chr3_2:64970342-64970361 | Msa0417690:intron | 60.0% |
| GGTTGGGGAAGGGGAAGAAG+AGG | - | chr3_2:64970351-64970370 | Msa0417690:intron | 60.0% | |
| !! | GGGTTTTGACCGGGAAGTGG+AGG | - | chr3_2:64970372-64970391 | Msa0417690:intron | 60.0% |
| CGGGAAGTGGAGGAGAGTGA+AGG | - | chr3_2:64970382-64970401 | Msa0417690:intron | 60.0% | |
| ! | GGTGGCGGCTTAATCATCGG+TGG | + | chr3_2:64970262-64970281 | None:intergenic | 60.0% |
| CCGATGATTAAGCCGCCACC+TGG | - | chr3_2:64970262-64970281 | Msa0417690:intron | 60.0% | |
| GGAACTCTCATCCCAGGTGG+CGG | + | chr3_2:64970277-64970296 | None:intergenic | 60.0% | |
| GCCACCTGGGATGAGAGTTC+CGG | - | chr3_2:64970276-64970295 | Msa0417690:intron | 60.0% | |
| ACCGGAACTCTCATCCCAGG+TGG | + | chr3_2:64970280-64970299 | None:intergenic | 60.0% | |
| ACCTGGGATGAGAGTTCCGG+TGG | - | chr3_2:64970279-64970298 | Msa0417690:intron | 60.0% | |
| ACCACCGGAACTCTCATCCC+AGG | + | chr3_2:64970283-64970302 | None:intergenic | 60.0% | |
| ! | GATTTGGCTCCGGTTGGGGA+AGG | - | chr3_2:64970340-64970359 | Msa0417690:intron | 60.0% |
| ! | TTTGGCTCCGGTTGGGGAAG+GGG | - | chr3_2:64970342-64970361 | Msa0417690:intron | 60.0% |
| GGTTGGGGAAGGGGAAGAAG+AGG | - | chr3_2:64970351-64970370 | Msa0417690:intron | 60.0% | |
| !! | GGGTTTTGACCGGGAAGTGG+AGG | - | chr3_2:64970372-64970391 | Msa0417690:intron | 60.0% |
| CGGGAAGTGGAGGAGAGTGA+AGG | - | chr3_2:64970382-64970401 | Msa0417690:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 64969788 | 64971880 | 64969788 | ID=Msa0417690;Name=Msa0417690 |
| chr3_2 | mRNA | 64969788 | 64971880 | 64969788 | ID=Msa0417690-mRNA-1;Parent=Msa0417690;Name=Msa0417690-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.5|1|1|2|0|267 |
| chr3_2 | exon | 64971119 | 64971880 | 64971119 | ID=Msa0417690-mRNA-1:exon:14549;Parent=Msa0417690-mRNA-1 |
| chr3_2 | exon | 64969788 | 64969829 | 64969788 | ID=Msa0417690-mRNA-1:exon:14548;Parent=Msa0417690-mRNA-1 |
| chr3_2 | CDS | 64971119 | 64971880 | 64971119 | ID=Msa0417690-mRNA-1:cds;Parent=Msa0417690-mRNA-1 |
| chr3_2 | CDS | 64969788 | 64969829 | 64969788 | ID=Msa0417690-mRNA-1:cds;Parent=Msa0417690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
