AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1382720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382720 MtrunA17_Chr3g0130621 98.861 439 5 0 1 439 1 439 0.0 887
Msa1382720 MtrunA17_Chr8g0384631 73.547 344 86 2 95 434 25 367 0.0 517
Msa1382720 MtrunA17_Chr8g0384631 38.290 269 158 4 11 273 41 307 1.44e-57 194
Msa1382720 MtrunA17_Chr6g0457381 33.903 351 205 9 36 370 5 344 1.13e-53 184
Msa1382720 MtrunA17_Chr6g0457381 30.471 361 213 10 13 344 34 385 6.45e-44 158
Msa1382720 MtrunA17_Chr3g0094741 35.294 340 201 7 54 376 306 643 4.34e-53 191
Msa1382720 MtrunA17_Chr3g0094741 30.959 365 231 6 20 368 324 683 5.07e-46 171
Msa1382720 MtrunA17_Chr3g0094741 31.429 245 152 4 154 382 301 545 4.04e-27 114
Msa1382720 MtrunA17_Chr5g0442001 35.549 346 203 8 48 376 290 632 2.53e-52 189
Msa1382720 MtrunA17_Chr5g0442001 30.894 369 225 8 20 368 314 672 2.09e-46 172
Msa1382720 MtrunA17_Chr5g0442001 33.617 235 141 5 17 238 418 650 2.95e-26 112
Msa1382720 MtrunA17_Chr6g0463421 33.166 398 217 9 16 376 214 599 1.85e-50 184
Msa1382720 MtrunA17_Chr6g0463421 30.499 341 215 6 20 342 281 617 4.10e-40 153
Msa1382720 MtrunA17_Chr6g0463421 30.392 306 184 8 4 290 322 617 6.43e-30 123
Msa1382720 MtrunA17_Chr6g0463421 34.746 118 76 1 20 137 503 619 1.47e-11 66.6
Msa1382720 MtrunA17_Chr8g0362061 34.409 372 202 9 39 376 247 610 4.61e-50 182
Msa1382720 MtrunA17_Chr8g0362061 33.235 340 209 5 20 342 290 628 2.35e-47 174
Msa1382720 MtrunA17_Chr8g0362061 32.827 329 190 6 88 385 243 571 2.30e-41 157
Msa1382720 MtrunA17_Chr8g0362061 31.507 292 180 7 17 290 339 628 7.83e-29 120
Msa1382720 MtrunA17_Chr8g0362061 31.646 237 147 4 16 238 393 628 6.27e-23 102
Msa1382720 MtrunA17_Chr1g0202151 33.728 338 208 5 54 376 266 602 2.26e-49 181
Msa1382720 MtrunA17_Chr1g0202151 31.085 341 219 5 17 342 281 620 5.16e-42 159
Msa1382720 MtrunA17_Chr1g0202151 32.365 241 152 2 9 238 380 620 1.73e-27 115
Msa1382720 MtrunA17_Chr1g0202151 34.746 118 76 1 20 137 506 622 3.53e-12 68.9
Msa1382720 MtrunA17_Chr7g0244411 35.376 359 205 10 52 388 249 602 2.37e-48 177
Msa1382720 MtrunA17_Chr7g0244411 34.024 338 206 7 20 342 269 604 3.58e-43 162
Msa1382720 MtrunA17_Chr7g0244411 32.900 231 143 4 16 235 372 601 2.65e-27 115
Msa1382720 MtrunA17_Chr3g0109811 33.036 336 208 6 56 376 293 626 3.57e-44 165
Msa1382720 MtrunA17_Chr3g0109811 30.636 346 207 7 20 342 309 644 9.64e-39 149
Msa1382720 MtrunA17_Chr3g0109811 28.028 289 193 4 16 290 357 644 2.37e-28 118
Msa1382720 MtrunA17_Chr1g0167471 32.845 341 209 7 54 376 261 599 5.49e-44 164
Msa1382720 MtrunA17_Chr1g0167471 30.833 360 221 8 17 356 276 627 1.61e-36 142
Msa1382720 MtrunA17_Chr1g0167471 30.000 380 217 11 59 406 210 572 1.65e-33 133
Msa1382720 MtrunA17_Chr1g0167471 33.333 237 143 4 16 238 382 617 6.99e-28 117
Msa1382720 MtrunA17_Chr5g0415871 31.105 344 207 10 21 344 52 385 2.67e-41 150
Msa1382720 MtrunA17_Chr5g0415871 30.707 368 186 10 84 383 10 376 1.40e-34 132
Msa1382720 MtrunA17_Chr5g0415871 36.574 216 127 6 185 393 7 219 1.58e-29 118
Msa1382720 MtrunA17_Chr5g0415871 31.984 247 133 9 15 239 151 384 1.51e-22 99.0
Msa1382720 MtrunA17_Chr4g0013271 31.472 394 247 8 23 396 24 414 2.89e-41 157
Msa1382720 MtrunA17_Chr4g0013271 35.043 234 140 4 16 238 174 406 6.53e-30 123
Msa1382720 MtrunA17_Chr4g0013271 33.600 125 82 1 4 128 276 399 1.70e-12 69.7
Msa1382720 MtrunA17_Chr3g0130871 32.803 314 183 8 55 344 18 327 6.86e-40 145
Msa1382720 MtrunA17_Chr3g0130871 34.437 302 167 8 15 290 29 325 2.40e-38 141
Msa1382720 MtrunA17_Chr3g0130871 29.778 225 137 6 177 383 34 255 5.48e-18 84.7
Msa1382720 MtrunA17_Chr3g0130871 34.021 97 61 2 269 362 22 118 1.84e-11 65.1
Msa1382720 MtrunA17_Chr2g0317861 30.769 351 231 7 20 360 116 464 8.89e-38 143
Msa1382720 MtrunA17_Chr2g0317861 30.606 330 217 8 2 321 150 477 1.92e-35 137
Msa1382720 MtrunA17_Chr2g0317861 29.781 319 208 7 70 376 114 428 1.35e-31 126
Msa1382720 MtrunA17_Chr2g0317861 29.327 208 142 5 177 380 116 322 9.05e-16 79.3
Msa1382720 MtrunA17_Chr7g0239601 38.983 177 107 1 60 236 30 205 9.38e-38 136
Msa1382720 MtrunA17_Chr7g0239601 38.150 173 105 2 174 345 39 210 7.35e-34 126
Msa1382720 MtrunA17_Chr7g0239601 35.374 147 95 0 228 374 42 188 2.06e-28 111
Msa1382720 MtrunA17_Chr7g0239601 29.885 174 120 2 17 190 39 210 2.03e-19 86.7
Msa1382720 MtrunA17_Chr7g0239601 34.167 120 75 1 277 392 39 158 2.40e-12 66.2
Msa1382720 MtrunA17_Chr3g0142381 30.925 346 207 10 26 348 69 405 1.79e-35 137
Msa1382720 MtrunA17_Chr3g0142381 29.412 306 188 7 94 377 30 329 9.78e-32 127
Msa1382720 MtrunA17_Chr3g0142381 27.778 360 213 13 58 388 47 388 6.49e-26 110
Msa1382720 MtrunA17_Chr7g0253611 29.577 284 185 6 82 351 148 430 2.92e-35 139
Msa1382720 MtrunA17_Chr7g0253611 30.312 353 204 10 28 351 133 472 1.28e-33 134
Msa1382720 MtrunA17_Chr7g0253611 28.936 235 153 5 128 352 145 375 4.06e-28 117
Msa1382720 MtrunA17_Chr7g0253611 26.910 301 194 8 17 303 188 476 9.57e-24 104
Msa1382720 MtrunA17_Chr7g0253611 28.689 244 155 7 15 251 245 476 1.28e-22 101
Msa1382720 MtrunA17_Chr7g0253611 27.149 221 141 7 172 376 131 347 7.77e-21 95.9
Msa1382720 MtrunA17_Chr3g0123301 28.493 365 234 10 22 361 153 515 9.81e-35 135
Msa1382720 MtrunA17_Chr3g0123301 27.393 303 210 5 73 366 152 453 4.90e-31 125
Msa1382720 MtrunA17_Chr3g0123301 32.342 269 161 5 124 377 150 412 1.95e-29 120
Msa1382720 MtrunA17_Chr3g0123301 30.568 229 133 7 17 221 307 533 1.38e-18 88.2
Msa1382720 MtrunA17_Chr3g0123301 29.502 261 163 8 17 256 254 514 8.86e-18 85.5
Msa1382720 MtrunA17_Chr7g0233601 29.577 355 217 4 36 361 48 398 1.64e-33 130
Msa1382720 MtrunA17_Chr7g0233601 31.579 342 192 10 87 392 46 381 7.87e-26 108
Msa1382720 MtrunA17_Chr7g0233601 30.040 253 167 4 12 256 147 397 3.62e-21 95.5
Msa1382720 MtrunA17_Chr7g0220131 29.620 368 194 12 39 358 26 376 1.08e-31 126
Msa1382720 MtrunA17_Chr7g0220131 29.630 324 187 8 16 307 63 377 1.17e-30 123
Msa1382720 MtrunA17_Chr7g0220131 29.139 302 164 9 86 351 20 307 1.80e-23 102
Msa1382720 MtrunA17_Chr7g0220131 35.681 213 114 7 13 203 165 376 4.46e-21 95.5
Msa1382720 MtrunA17_Chr7g0220131 27.363 201 120 5 184 366 14 206 1.34e-15 78.6
Msa1382720 MtrunA17_Chr3g0112381 34.483 145 93 1 99 241 17 161 6.74e-27 105
Msa1382720 MtrunA17_Chr3g0112381 36.134 119 73 2 228 344 43 160 1.53e-19 85.5
Msa1382720 MtrunA17_Chr3g0112381 37.671 146 87 3 46 189 17 160 2.07e-19 85.1
Msa1382720 MtrunA17_Chr3g0112381 37.815 119 72 1 254 370 17 135 8.20e-17 77.8
Msa1382720 MtrunA17_Chr3g0112381 31.852 135 88 3 3 135 26 158 2.82e-11 62.0
Msa1382720 MtrunA17_Chr1g0146211 28.399 331 201 12 78 373 14 343 3.64e-25 106
Msa1382720 MtrunA17_Chr1g0146211 31.092 238 124 9 17 218 110 343 4.28e-19 88.6
Msa1382720 MtrunA17_Chr3g0140201 28.406 345 196 14 102 404 31 366 4.22e-24 104
Msa1382720 MtrunA17_Chr3g0140201 33.891 239 119 12 15 218 99 333 5.13e-22 98.2
Msa1382720 MtrunA17_Chr3g0140201 26.241 282 171 10 20 266 51 330 5.82e-18 85.9
Msa1382720 MtrunA17_Chr3g0140201 35.762 151 80 6 38 172 193 342 2.80e-11 65.5
Msa1382720 MtrunA17_Chr5g0404371 22.943 401 230 9 8 343 54 440 2.01e-22 99.0
Msa1382720 MtrunA17_Chr5g0404371 27.673 318 159 10 36 293 136 442 2.42e-20 92.8
Msa1382720 MtrunA17_Chr5g0404371 22.670 397 197 11 89 376 26 421 4.82e-17 82.8
Msa1382720 MtrunA17_Chr1g0146221 37.037 81 49 1 120 198 12 92 2.89e-12 62.8
Msa1382720 MtrunA17_Chr3g0140211 36.905 84 47 1 121 198 16 99 1.06e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382720 AT5G63860.1 75.227 440 108 1 1 439 1 440 0.0 694
Msa1382720 AT5G12350.1 36.391 338 198 6 54 376 295 630 1.35e-56 202
Msa1382720 AT5G12350.1 31.844 358 223 7 20 362 313 664 1.00e-49 182
Msa1382720 AT5G12350.1 32.180 289 179 5 17 290 362 648 5.20e-36 141
Msa1382720 AT5G12350.1 30.672 238 151 3 159 382 295 532 2.32e-27 115
Msa1382720 AT5G19420.3 36.686 338 197 6 54 376 299 634 1.86e-56 201
Msa1382720 AT5G19420.3 31.868 364 227 7 20 368 317 674 5.49e-49 179
Msa1382720 AT5G19420.3 31.834 289 180 5 17 290 366 652 4.41e-35 139
Msa1382720 AT5G19420.3 30.672 238 151 3 159 382 299 536 2.87e-27 115
Msa1382720 AT5G19420.1 36.686 338 197 6 54 376 299 634 3.69e-56 201
Msa1382720 AT5G19420.1 31.868 364 227 7 20 368 317 674 7.32e-49 179
Msa1382720 AT5G19420.1 31.834 289 180 5 17 290 366 652 5.79e-35 138
Msa1382720 AT5G19420.1 30.672 238 151 3 159 382 299 536 3.18e-27 115
Msa1382720 AT5G19420.2 36.686 338 197 6 54 376 333 668 5.16e-56 200
Msa1382720 AT5G19420.2 32.123 358 222 7 20 362 351 702 1.01e-48 179
Msa1382720 AT5G19420.2 31.834 289 180 5 17 290 400 686 6.94e-35 138
Msa1382720 AT5G19420.2 30.672 238 151 3 159 382 333 570 3.66e-27 115
Msa1382720 AT5G16040.1 33.616 354 213 9 30 370 1 345 1.34e-55 189
Msa1382720 AT5G16040.1 29.180 305 175 11 16 290 92 385 1.55e-30 122
Msa1382720 AT5G16040.1 29.317 249 153 7 141 376 7 245 3.56e-22 98.2
Msa1382720 AT3G02510.1 32.584 356 214 9 30 370 1 345 3.05e-55 188
Msa1382720 AT3G02510.1 28.383 303 157 8 14 258 37 337 5.35e-32 126
Msa1382720 AT3G02510.1 31.429 245 142 5 13 238 148 385 4.98e-27 112
Msa1382720 AT3G02510.1 28.400 250 154 8 141 376 7 245 1.15e-21 96.7
Msa1382720 AT5G42140.2 35.440 364 212 10 33 376 240 600 7.78e-52 188
Msa1382720 AT5G42140.2 32.194 351 218 6 20 355 282 627 1.15e-43 164
Msa1382720 AT5G42140.2 32.051 312 186 6 88 374 235 545 3.61e-38 148
Msa1382720 AT5G42140.2 33.333 204 116 6 191 377 234 434 2.94e-20 94.4
Msa1382720 AT5G42140.1 35.440 364 212 10 33 376 240 600 7.78e-52 188
Msa1382720 AT5G42140.1 32.194 351 218 6 20 355 282 627 1.15e-43 164
Msa1382720 AT5G42140.1 32.051 312 186 6 88 374 235 545 3.61e-38 148
Msa1382720 AT5G42140.1 33.333 204 116 6 191 377 234 434 2.94e-20 94.4
Msa1382720 AT5G08710.1 32.216 388 224 13 39 394 54 434 7.32e-49 172
Msa1382720 AT5G08710.1 29.745 353 219 9 17 344 84 432 2.24e-38 144
Msa1382720 AT5G08710.1 33.133 166 106 3 188 348 44 209 2.66e-19 90.1
Msa1382720 AT5G08710.1 33.566 143 89 4 239 376 44 185 2.72e-13 72.0
Msa1382720 AT1G76950.1 33.529 340 208 6 54 376 268 606 3.43e-46 171
Msa1382720 AT1G76950.1 31.195 343 212 7 20 342 286 624 3.63e-41 157
Msa1382720 AT1G76950.1 32.051 234 147 2 17 238 391 624 1.82e-26 113
Msa1382720 AT1G76950.1 32.105 190 114 6 206 383 263 449 4.05e-16 81.6
Msa1382720 AT1G76950.1 36.441 118 74 1 20 137 510 626 2.91e-13 72.8
Msa1382720 AT4G14368.1 33.333 360 217 9 54 393 257 613 9.80e-46 170
Msa1382720 AT4G14368.1 29.630 351 228 6 20 356 275 620 4.08e-37 145
Msa1382720 AT4G14368.1 31.624 234 148 4 16 238 378 610 2.58e-28 119
Msa1382720 AT4G14368.4 33.427 356 214 9 54 389 257 609 1.13e-45 170
Msa1382720 AT4G14368.4 30.267 337 220 5 20 342 275 610 4.21e-37 145
Msa1382720 AT4G14368.4 31.624 234 148 4 16 238 378 610 2.43e-28 119
Msa1382720 AT4G14368.3 32.203 354 221 6 54 389 250 602 1.23e-45 170
Msa1382720 AT4G14368.3 29.630 351 228 6 20 356 268 613 4.00e-37 145
Msa1382720 AT4G14368.3 31.624 234 148 4 16 238 371 603 2.44e-28 119
Msa1382720 AT4G14368.2 32.203 354 221 6 54 389 255 607 1.28e-45 170
Msa1382720 AT4G14368.2 30.267 337 220 5 20 342 273 608 4.49e-37 145
Msa1382720 AT4G14368.2 31.624 234 148 4 16 238 376 608 2.54e-28 119
Msa1382720 AT5G16040.2 32.911 316 190 9 30 332 1 307 6.87e-45 159
Msa1382720 AT5G16040.2 30.137 292 183 6 85 364 3 285 4.37e-35 133
Msa1382720 AT5G16040.2 30.216 278 176 7 14 280 37 307 1.40e-30 121
Msa1382720 AT5G16040.2 29.317 249 153 7 141 376 7 245 7.08e-23 99.4
Msa1382720 AT1G69710.1 34.286 350 190 10 52 373 285 622 7.44e-45 167
Msa1382720 AT1G69710.1 31.856 361 222 8 20 362 305 659 1.17e-40 155
Msa1382720 AT1G69710.1 33.639 327 187 7 88 385 261 586 3.35e-38 148
Msa1382720 AT1G69710.2 34.286 350 190 10 52 373 272 609 8.49e-45 167
Msa1382720 AT1G69710.2 31.856 361 222 8 20 362 292 646 1.20e-40 155
Msa1382720 AT1G69710.2 33.639 327 187 7 88 385 248 573 4.01e-38 148
Msa1382720 AT3G02510.3 32.997 297 174 8 89 370 1 287 9.61e-45 159
Msa1382720 AT3G02510.3 29.586 338 200 10 36 344 1 329 1.79e-38 142
Msa1382720 AT3G02510.3 30.040 253 160 7 16 258 34 279 3.91e-31 122
Msa1382720 AT3G02510.3 31.429 245 142 5 13 238 90 327 1.83e-27 112
Msa1382720 AT3G02510.3 28.788 198 116 8 193 376 1 187 7.69e-12 66.6
Msa1382720 AT3G23270.2 33.427 356 214 9 54 389 242 594 1.02e-44 167
Msa1382720 AT3G23270.2 29.661 354 229 7 24 362 263 611 2.33e-36 142
Msa1382720 AT3G23270.2 31.624 234 148 4 16 238 363 595 5.81e-27 114
Msa1382720 AT3G23270.1 33.427 356 214 9 54 389 238 590 1.39e-44 167
Msa1382720 AT3G23270.1 29.661 354 229 7 24 362 259 607 3.28e-36 142
Msa1382720 AT3G23270.1 31.624 234 148 4 16 238 359 591 7.35e-27 114
Msa1382720 AT3G02510.2 31.761 318 191 9 30 332 1 307 1.57e-44 157
Msa1382720 AT3G02510.2 30.479 292 182 7 85 364 3 285 2.00e-35 133
Msa1382720 AT3G02510.2 29.286 280 176 8 14 280 37 307 5.16e-30 119
Msa1382720 AT3G02510.2 28.400 250 154 8 141 376 7 245 4.23e-22 96.7
Msa1382720 AT3G02510.2 34.591 159 95 4 13 169 148 299 3.25e-18 85.5
Msa1382720 AT1G65920.2 33.429 347 206 6 48 376 227 566 2.26e-44 166
Msa1382720 AT1G65920.2 33.431 341 202 10 20 342 251 584 1.25e-39 152
Msa1382720 AT1G65920.2 30.417 240 155 2 17 244 351 590 1.69e-26 113
Msa1382720 AT1G65920.1 33.429 347 206 6 48 376 273 612 2.40e-44 166
Msa1382720 AT1G65920.1 33.431 341 202 10 20 342 297 630 1.29e-39 152
Msa1382720 AT1G65920.1 30.417 240 155 2 17 244 397 636 1.71e-26 113
Msa1382720 AT3G15430.6 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.6 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.6 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.6 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.6 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G15430.4 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.4 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.4 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.4 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.4 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G15430.2 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.2 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.2 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.2 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.2 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G15430.3 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.3 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.3 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.3 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.3 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G15430.5 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.5 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.5 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.5 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.5 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G15430.1 31.267 371 240 8 1 360 97 463 2.51e-44 161
Msa1382720 AT3G15430.1 30.000 320 213 6 66 376 110 427 9.78e-33 129
Msa1382720 AT3G15430.1 32.171 258 165 6 20 269 221 476 2.62e-30 122
Msa1382720 AT3G15430.1 27.230 213 149 3 17 224 271 482 4.51e-18 86.7
Msa1382720 AT3G15430.1 29.545 220 146 5 166 380 107 322 2.28e-16 81.6
Msa1382720 AT3G47660.7 33.234 337 202 8 54 376 141 468 7.79e-43 161
Msa1382720 AT3G47660.7 30.383 339 209 9 20 342 159 486 4.05e-34 135
Msa1382720 AT3G47660.7 30.282 284 183 6 17 290 208 486 1.93e-26 112
Msa1382720 AT3G47660.7 31.795 195 111 6 2 187 305 486 1.78e-18 88.6
Msa1382720 AT3G47660.7 33.129 163 102 3 228 383 159 321 2.25e-17 85.1
Msa1382720 AT3G47660.6 33.234 337 202 8 54 376 208 535 1.05e-42 161
Msa1382720 AT3G47660.6 30.383 339 209 9 20 342 226 553 4.53e-34 135
Msa1382720 AT3G47660.6 30.282 284 183 6 17 290 275 553 2.33e-26 112
Msa1382720 AT3G47660.6 31.795 195 111 6 2 187 372 553 1.95e-18 88.6
Msa1382720 AT3G47660.6 33.129 163 102 3 228 383 226 388 2.14e-17 85.5
Msa1382720 AT3G47660.1 33.234 337 202 8 54 376 286 613 1.63e-42 160
Msa1382720 AT3G47660.1 30.383 339 209 9 20 342 304 631 4.80e-34 135
Msa1382720 AT3G47660.1 30.282 284 183 6 17 290 353 631 2.52e-26 112
Msa1382720 AT3G47660.1 31.795 195 111 6 2 187 450 631 2.12e-18 88.6
Msa1382720 AT3G47660.1 33.129 163 102 3 228 383 304 466 2.37e-17 85.5
Msa1382720 AT3G47660.3 33.234 337 202 8 54 376 283 610 1.65e-42 160
Msa1382720 AT3G47660.3 30.383 339 209 9 20 342 301 628 4.74e-34 135
Msa1382720 AT3G47660.3 30.282 284 183 6 17 290 350 628 2.31e-26 112
Msa1382720 AT3G47660.3 31.795 195 111 6 2 187 447 628 1.97e-18 88.6
Msa1382720 AT3G47660.3 33.129 163 102 3 228 383 301 463 2.55e-17 85.1
Msa1382720 AT3G47660.5 33.234 337 202 8 54 376 283 610 1.65e-42 160
Msa1382720 AT3G47660.5 30.383 339 209 9 20 342 301 628 4.74e-34 135
Msa1382720 AT3G47660.5 30.282 284 183 6 17 290 350 628 2.31e-26 112
Msa1382720 AT3G47660.5 31.795 195 111 6 2 187 447 628 1.97e-18 88.6
Msa1382720 AT3G47660.5 33.129 163 102 3 228 383 301 463 2.55e-17 85.1
Msa1382720 AT3G47660.2 33.234 337 202 8 54 376 286 613 1.66e-42 160
Msa1382720 AT3G47660.2 30.383 339 209 9 20 342 304 631 4.71e-34 135
Msa1382720 AT3G47660.2 30.282 284 183 6 17 290 353 631 2.36e-26 112
Msa1382720 AT3G47660.2 31.795 195 111 6 2 187 450 631 1.82e-18 89.0
Msa1382720 AT3G47660.2 33.129 163 102 3 228 383 304 466 2.64e-17 85.1
Msa1382720 AT3G47660.4 33.234 337 202 8 54 376 322 649 1.82e-42 160
Msa1382720 AT3G47660.4 30.383 339 209 9 20 342 340 667 4.63e-34 135
Msa1382720 AT3G47660.4 30.282 284 183 6 17 290 389 667 2.68e-26 112
Msa1382720 AT3G47660.4 31.795 195 111 6 2 187 486 667 1.92e-18 88.6
Msa1382720 AT3G47660.4 33.129 163 102 3 228 383 340 502 2.19e-17 85.5
Msa1382720 AT1G27060.1 32.764 351 219 8 36 379 17 357 1.98e-42 154
Msa1382720 AT1G27060.1 29.412 340 224 6 17 348 50 381 2.01e-41 151
Msa1382720 AT1G27060.1 32.164 171 115 1 192 361 16 186 3.91e-27 112
Msa1382720 AT1G27060.1 32.847 137 92 0 243 379 16 152 1.19e-17 84.7
Msa1382720 AT5G60870.4 31.909 351 194 9 36 377 50 364 1.15e-40 149
Msa1382720 AT5G60870.4 31.140 228 147 5 20 239 157 382 2.64e-24 104
Msa1382720 AT5G60870.4 33.149 181 110 4 16 188 205 382 1.34e-19 90.5
Msa1382720 AT5G60870.1 32.812 320 183 7 87 377 48 364 3.67e-40 149
Msa1382720 AT5G60870.1 27.778 378 243 5 36 385 50 425 9.60e-38 142
Msa1382720 AT5G60870.1 30.556 288 183 7 20 292 157 442 3.89e-29 119
Msa1382720 AT5G60870.1 31.120 241 147 7 16 240 205 442 2.14e-23 102
Msa1382720 AT3G53830.3 36.496 274 139 7 101 340 193 465 3.90e-40 150
Msa1382720 AT3G53830.3 33.463 257 139 4 16 241 215 470 9.02e-40 149
Msa1382720 AT3G53830.3 26.330 376 208 10 49 374 92 448 7.47e-32 127
Msa1382720 AT3G53830.3 30.566 265 150 5 58 290 205 467 4.07e-28 116
Msa1382720 AT3G53830.3 34.807 181 114 3 9 187 289 467 1.68e-23 102
Msa1382720 AT3G53830.3 26.257 358 201 13 73 380 56 400 1.09e-14 76.3
Msa1382720 AT3G53830.4 36.496 274 139 7 101 340 221 493 5.79e-40 150
Msa1382720 AT3G53830.4 33.463 257 139 4 16 241 243 498 1.58e-39 149
Msa1382720 AT3G53830.4 25.510 392 219 9 49 374 92 476 1.08e-30 124
Msa1382720 AT3G53830.4 30.566 265 150 5 58 290 233 495 4.10e-28 116
Msa1382720 AT3G53830.4 34.807 181 114 3 9 187 317 495 1.77e-23 103
Msa1382720 AT3G53830.4 24.074 378 212 11 73 380 56 428 2.35e-14 75.5
Msa1382720 AT5G60870.2 32.812 320 183 7 87 377 48 364 6.26e-40 149
Msa1382720 AT5G60870.2 27.532 385 242 6 36 385 50 432 2.23e-35 136
Msa1382720 AT5G60870.2 29.831 295 183 8 20 292 157 449 1.04e-26 112
Msa1382720 AT5G60870.2 29.555 247 150 7 16 240 205 449 4.76e-21 95.5
Msa1382720 AT3G55580.1 33.977 259 142 5 110 340 224 481 5.01e-35 136
Msa1382720 AT3G55580.1 34.118 255 137 6 160 383 222 476 6.17e-35 135
Msa1382720 AT3G55580.1 31.343 268 154 5 51 290 218 483 5.28e-32 127
Msa1382720 AT3G55580.1 35.838 173 107 3 17 187 313 483 2.41e-20 93.6
Msa1382720 AT3G55580.1 27.064 218 113 4 224 412 235 435 7.68e-14 73.9
Msa1382720 AT5G11580.1 28.810 420 233 14 15 373 16 430 7.10e-35 136
Msa1382720 AT5G11580.1 29.032 372 197 12 16 328 74 437 6.96e-27 113
Msa1382720 AT5G11580.1 30.233 258 132 8 174 385 18 273 8.94e-23 101
Msa1382720 AT5G08710.2 32.982 285 170 9 39 308 54 332 1.40e-33 129
Msa1382720 AT5G08710.2 30.420 286 175 8 92 360 54 332 1.34e-26 109
Msa1382720 AT5G08710.2 29.762 252 162 6 17 256 84 332 1.01e-23 101
Msa1382720 AT5G08710.2 33.133 166 106 3 188 348 44 209 7.59e-20 90.5
Msa1382720 AT5G08710.2 27.160 243 163 5 144 373 54 295 1.42e-17 84.0
Msa1382720 AT5G08710.2 31.553 206 119 6 15 205 134 332 3.57e-15 76.6
Msa1382720 AT5G08710.2 33.566 143 89 4 239 376 44 185 9.85e-14 72.4
Msa1382720 AT1G19880.1 29.808 312 185 8 94 377 30 335 5.22e-32 128
Msa1382720 AT1G19880.1 28.453 362 221 11 16 348 59 411 8.72e-32 127
Msa1382720 AT1G19880.1 24.528 318 204 8 1 290 96 405 6.97e-19 89.4
Msa1382720 AT3G03790.1 28.716 296 196 6 70 351 133 427 1.40e-31 128
Msa1382720 AT3G03790.1 32.287 223 140 4 140 352 151 372 1.02e-28 120
Msa1382720 AT3G03790.1 23.496 349 214 9 17 342 185 503 8.98e-23 102
Msa1382720 AT3G03790.1 27.103 214 145 5 173 376 132 344 1.68e-20 95.1
Msa1382720 AT3G03790.1 29.461 241 149 7 15 247 242 469 3.36e-19 91.3
Msa1382720 AT3G26100.5 28.650 363 234 9 22 360 150 511 1.58e-31 127
Msa1382720 AT3G26100.5 26.301 346 235 7 73 400 149 492 5.43e-29 119
Msa1382720 AT3G26100.5 30.303 264 173 5 124 377 147 409 3.89e-24 105
Msa1382720 AT3G26100.5 32.314 229 129 8 17 221 304 530 6.24e-20 92.8
Msa1382720 AT3G26100.5 27.465 284 174 11 15 269 247 527 1.76e-17 85.1
Msa1382720 AT3G26100.6 28.650 363 234 9 22 360 150 511 1.58e-31 127
Msa1382720 AT3G26100.6 26.301 346 235 7 73 400 149 492 5.43e-29 119
Msa1382720 AT3G26100.6 30.303 264 173 5 124 377 147 409 3.89e-24 105
Msa1382720 AT3G26100.6 32.314 229 129 8 17 221 304 530 6.24e-20 92.8
Msa1382720 AT3G26100.6 27.465 284 174 11 15 269 247 527 1.76e-17 85.1
Msa1382720 AT3G26100.2 28.650 363 234 9 22 360 150 511 1.58e-31 127
Msa1382720 AT3G26100.2 26.301 346 235 7 73 400 149 492 5.43e-29 119
Msa1382720 AT3G26100.2 30.303 264 173 5 124 377 147 409 3.89e-24 105
Msa1382720 AT3G26100.2 32.314 229 129 8 17 221 304 530 6.24e-20 92.8
Msa1382720 AT3G26100.2 27.465 284 174 11 15 269 247 527 1.76e-17 85.1
Msa1382720 AT3G03790.3 29.391 279 182 6 87 351 153 430 2.20e-31 128
Msa1382720 AT3G03790.3 32.287 223 140 4 140 352 154 375 1.05e-28 120
Msa1382720 AT3G03790.3 23.496 349 214 9 17 342 188 506 9.38e-23 102
Msa1382720 AT3G03790.3 28.505 214 138 6 173 376 139 347 7.76e-20 93.2
Msa1382720 AT3G03790.3 29.461 241 149 7 15 247 245 472 3.71e-19 90.9
Msa1382720 AT3G03790.2 29.391 279 182 6 87 351 153 430 2.24e-31 128
Msa1382720 AT3G03790.2 32.287 223 140 4 140 352 154 375 1.10e-28 120
Msa1382720 AT3G03790.2 23.496 349 214 9 17 342 188 506 9.49e-23 102
Msa1382720 AT3G03790.2 28.505 214 138 6 173 376 139 347 7.17e-20 93.2
Msa1382720 AT3G03790.2 29.461 241 149 7 15 247 245 472 3.72e-19 90.9
Msa1382720 AT3G26100.3 28.650 363 234 9 22 360 50 411 2.76e-31 124
Msa1382720 AT3G26100.3 26.301 346 235 7 73 400 49 392 7.56e-29 117
Msa1382720 AT3G26100.3 30.303 264 173 5 124 377 47 309 5.03e-24 103
Msa1382720 AT3G26100.3 31.600 250 139 10 2 221 183 430 5.16e-20 92.4
Msa1382720 AT3G26100.3 27.465 284 174 11 15 269 147 427 2.87e-17 84.0
Msa1382720 AT3G26100.4 28.650 363 234 9 22 360 50 411 2.76e-31 124
Msa1382720 AT3G26100.4 26.301 346 235 7 73 400 49 392 7.56e-29 117
Msa1382720 AT3G26100.4 30.303 264 173 5 124 377 47 309 5.03e-24 103
Msa1382720 AT3G26100.4 31.600 250 139 10 2 221 183 430 5.16e-20 92.4
Msa1382720 AT3G26100.4 27.465 284 174 11 15 269 147 427 2.87e-17 84.0
Msa1382720 AT3G26100.1 28.650 363 234 9 22 360 50 411 2.76e-31 124
Msa1382720 AT3G26100.1 26.301 346 235 7 73 400 49 392 7.56e-29 117
Msa1382720 AT3G26100.1 30.303 264 173 5 124 377 47 309 5.03e-24 103
Msa1382720 AT3G26100.1 31.600 250 139 10 2 221 183 430 5.16e-20 92.4
Msa1382720 AT3G26100.1 27.465 284 174 11 15 269 147 427 2.87e-17 84.0
Msa1382720 AT5G48330.2 27.342 395 223 12 36 374 46 432 4.45e-31 124
Msa1382720 AT5G48330.2 27.575 301 163 10 39 292 161 453 1.15e-18 88.6
Msa1382720 AT5G48330.2 29.545 176 116 4 16 190 286 454 4.64e-15 77.4
Msa1382720 AT5G48330.1 27.273 396 223 12 36 374 46 433 4.55e-31 124
Msa1382720 AT5G48330.1 27.575 301 163 10 39 292 162 454 1.09e-18 88.6
Msa1382720 AT5G48330.1 29.545 176 116 4 16 190 287 455 4.45e-15 77.4
Msa1382720 AT3G02300.1 29.814 322 187 9 16 306 62 375 1.17e-27 115
Msa1382720 AT3G02300.1 27.676 383 206 15 27 358 13 375 1.72e-27 114
Msa1382720 AT3G02300.1 30.841 214 125 6 12 203 163 375 1.29e-18 88.2
Msa1382720 AT3G02300.1 28.169 213 126 6 184 377 13 217 5.71e-17 83.2
Msa1382720 AT3G02300.2 29.814 322 187 9 16 306 73 386 1.47e-27 115
Msa1382720 AT3G02300.2 27.676 383 206 15 27 358 24 386 2.17e-27 114
Msa1382720 AT3G02300.2 30.841 214 125 6 12 203 174 386 1.56e-18 88.2
Msa1382720 AT3G02300.2 27.193 228 139 6 169 377 9 228 4.91e-17 83.6
Msa1382720 AT5G60870.3 28.731 268 174 7 40 292 8 273 7.86e-25 103
Msa1382720 AT5G60870.3 30.417 240 150 6 16 240 36 273 1.75e-24 102
Msa1382720 AT5G60870.3 35.263 190 112 4 197 377 8 195 3.59e-21 93.2
Msa1382720 AT5G60870.3 27.049 244 170 2 150 385 13 256 2.80e-20 90.9
Msa1382720 AT3G53830.1 25.220 341 186 10 49 339 92 413 1.57e-24 105
Msa1382720 AT3G53830.1 28.571 203 113 4 16 187 215 416 7.42e-20 91.7
Msa1382720 AT3G53830.1 26.431 367 201 14 73 383 56 409 3.44e-15 77.8
Msa1382720 AT3G53830.1 35.338 133 81 3 9 137 289 420 2.04e-13 72.0
Msa1382720 AT5G11580.2 32.157 255 133 8 110 328 36 286 3.04e-24 104
Msa1382720 AT5G11580.2 29.555 247 136 8 162 373 36 279 1.43e-19 90.5
Msa1382720 AT5G11580.2 31.933 238 124 12 15 218 46 279 1.09e-18 88.2
Msa1382720 AT3G53830.2 24.370 357 197 9 49 339 92 441 3.20e-23 102
Msa1382720 AT3G53830.2 28.571 203 113 4 16 187 243 444 1.27e-19 91.3
Msa1382720 AT3G53830.2 24.289 387 212 12 73 383 56 437 1.03e-14 76.3
Msa1382720 AT3G53830.2 35.338 133 81 3 9 137 317 448 2.59e-13 72.0

Find 189 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCGTTTGACATCGCTTTC+TGG 0.055330 tig0020524:+14900 None:intergenic
ACAACCGGTGGACAGCTTTA+TGG 0.179366 tig0020524:-16670 Msa1382720:CDS
AATGAACTTGCATAACTTAA+TGG 0.196695 tig0020524:+14363 None:intergenic
GGTTTATCTGTCTGCATTCT+AGG 0.205539 tig0020524:+14555 None:intergenic
CTTATATTCTTTCAGGTATC+AGG 0.229815 tig0020524:-16718 Msa1382720:intron
GGAAAAGAAAGTAGAGAAAT+AGG 0.250724 tig0020524:-14598 Msa1382720:three_prime_UTR
TTAGAGCATTACAAGGATTA+AGG 0.273604 tig0020524:-19149 Msa1382720:CDS
TTATGGGTGGGGCTGGAATA+AGG 0.283153 tig0020524:-16653 Msa1382720:intron
ACATATGGATGGAGCAAATA+TGG 0.290691 tig0020524:-17129 Msa1382720:CDS
CAAATGGGCAACTTGGAATT+GGG 0.297060 tig0020524:-16088 Msa1382720:CDS
ACAAATGGGCAACTTGGAAT+TGG 0.315329 tig0020524:-16089 Msa1382720:CDS
CAACCGGTGGACAGCTTTAT+GGG 0.330036 tig0020524:-16669 Msa1382720:CDS
GTTAGAAGAGATGAAGAATA+AGG 0.331737 tig0020524:-20742 Msa1382720:five_prime_UTR
TCAAACACAGATCATTTATC+AGG 0.333371 tig0020524:-15691 Msa1382720:intron
AATCCTTGTAATGCTCTAAT+AGG 0.336258 tig0020524:+19153 None:intergenic
GAAAAGACGAGAGAAGAGTT+TGG 0.337322 tig0020524:+20537 None:intergenic
ATCGAGGCTTTGAGTGTTGA+TGG 0.341497 tig0020524:-15739 Msa1382720:CDS
AGAGGAGAGGATGGACAATT+AGG 0.357075 tig0020524:-19892 Msa1382720:CDS
AAAAGACAATGTATATTCTT+GGG 0.365968 tig0020524:-16120 Msa1382720:CDS
TGCTGAATTGAGCATAGGTT+TGG 0.366665 tig0020524:+20600 None:intergenic
TCCGTTTGACATCGCTTTCT+GGG 0.368249 tig0020524:+14901 None:intergenic
GTTAAGTATTGGCAAGATCT+TGG 0.369548 tig0020524:-14484 Msa1382720:three_prime_UTR
CTCAAAGCCTCGATAATCTT+AGG 0.369769 tig0020524:+15748 None:intergenic
AGAGCTGTACGGATGGGGCT+GGG 0.373692 tig0020524:-17553 Msa1382720:CDS
AGGGGTGACTTTGGACGGTT+GGG 0.392631 tig0020524:-19210 Msa1382720:CDS
TCTTGTGCCTCACAAGCTTC+AGG 0.392659 tig0020524:-17076 Msa1382720:CDS
GACAGCTTTATGGGTGGGGC+TGG 0.395829 tig0020524:-16660 Msa1382720:CDS
CAGGGGTGACTTTGGACGGT+TGG 0.397928 tig0020524:-19211 Msa1382720:CDS
AAAAGTGGAAGTATATAGTT+GGG 0.402716 tig0020524:-19758 Msa1382720:CDS
AACTTTCAGGTACCTGATCA+TGG 0.404688 tig0020524:+16316 None:intergenic
CTGGGGACGATACGGAAACT+TGG 0.408052 tig0020524:-17535 Msa1382720:CDS
CTCTGCCTCATCAGTCCCAT+GGG 0.408069 tig0020524:-14818 Msa1382720:three_prime_UTR
ACAATATCTGTTTCATCGTC+TGG 0.410153 tig0020524:-17162 Msa1382720:CDS
TGGAGGTGGAGAAGCGGTGG+TGG 0.415227 tig0020524:+20352 None:intergenic
GAGCTGTACGGATGGGGCTG+GGG 0.419370 tig0020524:-17552 Msa1382720:CDS
GATGCATCATTCTTGTCAAA+TGG 0.419572 tig0020524:+14851 None:intergenic
GAGAGCTGTACGGATGGGGC+TGG 0.421190 tig0020524:-17554 Msa1382720:CDS
TCTTGGGGAAGAGGCACAAA+TGG 0.421528 tig0020524:-16104 Msa1382720:CDS
ATGGAGCAAATATGGCCAAC+TGG 0.422932 tig0020524:-17121 Msa1382720:CDS
GTAGGGACTACCTATCAAAA+TGG 0.422979 tig0020524:-17619 Msa1382720:intron
CTCAGGCAGTTTAGATAGGC+TGG 0.424099 tig0020524:-14934 Msa1382720:CDS
AGTGTGGCCATCACTGAAAA+AGG 0.426071 tig0020524:-17576 Msa1382720:CDS
CAAAAGTGGAAGTATATAGT+TGG 0.429293 tig0020524:-19759 Msa1382720:CDS
AATTAAAACTTCATCATAAG+AGG 0.430207 tig0020524:+14414 None:intergenic
CGTGTACTTCTTATATCTGC+TGG 0.435213 tig0020524:-20323 Msa1382720:CDS
CAACTGTGGTGGTGAGGAAT+TGG 0.435963 tig0020524:-20764 Msa1382720:five_prime_UTR
AAATGGTTGGTGATGATGTT+TGG 0.437250 tig0020524:-20715 Msa1382720:five_prime_UTR
AAAAGACGAGAGAAGAGTTT+GGG 0.437255 tig0020524:+20538 None:intergenic
GGGTGGAGGTGGAGAAGCGG+TGG 0.439837 tig0020524:+20349 None:intergenic
AGTACACGGCGGGGTGGAGG+TGG 0.440286 tig0020524:+20338 None:intergenic
ATGTCAGAGAGAACAGTAAT+GGG 0.444631 tig0020524:+20513 None:intergenic
TAGTGATAAGTTAATTTGTC+AGG 0.448413 tig0020524:-17049 Msa1382720:intron
AGGTGGTTGGAGGCATACTA+TGG 0.451564 tig0020524:-16698 Msa1382720:CDS
TGCAATATTTCTCATAATGT+GGG 0.459771 tig0020524:+14735 None:intergenic
CTAACTCAGGCAGTTTAGAT+AGG 0.461509 tig0020524:-14938 Msa1382720:CDS
GATGAGGCAGAGACATTGAT+TGG 0.461716 tig0020524:+14829 None:intergenic
GCGGGGTGGAGGTGGAGAAG+CGG 0.462266 tig0020524:+20346 None:intergenic
TTCAGGTATCAGGTGGTTGG+AGG 0.462344 tig0020524:-16708 Msa1382720:intron
CGGAATCAAAATGGTCAACT+TGG 0.462714 tig0020524:-18484 Msa1382720:CDS
CAAATTGTATCTGTTGTTTG+TGG 0.465176 tig0020524:-19811 Msa1382720:CDS
GACTTTGGACGGTTGGGTCA+TGG 0.466218 tig0020524:-19204 Msa1382720:CDS
ATGCTTGAATAGTTAAGTAT+TGG 0.468467 tig0020524:-14495 Msa1382720:three_prime_UTR
GCTGAATTGAGCATAGGTTT+GGG 0.470194 tig0020524:+20601 None:intergenic
AGAGGCACAAATGGGCAACT+TGG 0.470788 tig0020524:-16095 Msa1382720:CDS
CAGGCGCCGGTGGCTAACTC+AGG 0.471638 tig0020524:-14951 Msa1382720:CDS
GCCTACTCAACTCAGTGCAT+TGG 0.475116 tig0020524:-19842 Msa1382720:CDS
AACAGACAGCAACTCCCAAC+TGG 0.481470 tig0020524:+14534 None:intergenic
TGTGAAACTGTTTACTGTAA+AGG 0.481528 tig0020524:-20397 Msa1382720:five_prime_UTR
TCTGGTGAACTATACACATA+TGG 0.482624 tig0020524:-17144 Msa1382720:CDS
AATGTATATTCTTGGGGAAG+AGG 0.484862 tig0020524:-16113 Msa1382720:CDS
ACAAATTAACTTATCACTAA+AGG 0.485321 tig0020524:+17053 None:intergenic
GTTGTTTGCTCGTGGGGTAG+AGG 0.485576 tig0020524:-19910 Msa1382720:CDS
TAGAAGCAATTACCAGTCAA+TGG 0.487345 tig0020524:+16061 None:intergenic
CGGTGGACAGCTTTATGGGT+GGG 0.487551 tig0020524:-16665 Msa1382720:CDS
TGGGGAAATTTCACTTGCAC+AGG 0.488547 tig0020524:+16336 None:intergenic
TCTTTCAGGTATCAGGTGGT+TGG 0.489377 tig0020524:-16711 Msa1382720:intron
GGATGGGGCTGGGGACGATA+CGG 0.491076 tig0020524:-17543 Msa1382720:CDS
TTGAGTGTTGATGGATCTTG+TGG 0.498209 tig0020524:-15730 Msa1382720:CDS
AGTGAAATTTCCCCATGATC+AGG 0.498584 tig0020524:-16328 Msa1382720:intron
GTTGCTGTCTGTTGTTTAAG+TGG 0.498975 tig0020524:-14524 Msa1382720:three_prime_UTR
ACATCAACAGAAACTTTCTC+TGG 0.499062 tig0020524:+17483 None:intergenic
AGATAGATTTAGATGTTGAC+AGG 0.499440 tig0020524:+20563 None:intergenic
ATGCAATATTTCTCATAATG+TGG 0.499688 tig0020524:+14734 None:intergenic
AAGATGGTCTTGGTTGCTTG+TGG 0.500717 tig0020524:-17195 Msa1382720:CDS
CAGCCTATTAGAGCATTACA+AGG 0.501382 tig0020524:-19156 Msa1382720:CDS
GAGACACTTACAGCTTCATC+TGG 0.503810 tig0020524:+15459 None:intergenic
TGCTTATTCAGAGTCAAAAG+TGG 0.504625 tig0020524:-19773 Msa1382720:CDS
AATAGCCAAAATGATAAAAG+TGG 0.505255 tig0020524:+14786 None:intergenic
CATACTATGGCACTCACAAC+CGG 0.507592 tig0020524:-16685 Msa1382720:CDS
TTGCGGTGATAGCCACTGTT+TGG 0.508120 tig0020524:-19112 Msa1382720:CDS
CTGGAAATGTTGTTTGCTCG+TGG 0.508932 tig0020524:-19918 Msa1382720:CDS
AGAAGTACACGGCGGGGTGG+AGG 0.515927 tig0020524:+20335 None:intergenic
TCCCAGAAAGCGATGTCAAA+CGG 0.518030 tig0020524:-14902 Msa1382720:CDS
CGATACGGAAACTTGGGATT+GGG 0.519637 tig0020524:-17528 Msa1382720:CDS
TAGTTTGGACAAGTTGGAGT+TGG 0.522851 tig0020524:-16381 Msa1382720:CDS
CATCGCTTTCTGGGACACTA+AGG 0.523081 tig0020524:+14910 None:intergenic
CCAAACGGGCACTACAACTG+TGG 0.523331 tig0020524:-20778 None:intergenic
TCTCTGCCTCATCAGTCCCA+TGG 0.525441 tig0020524:-14819 Msa1382720:three_prime_UTR
ACAAAAGATTCAAACATTCC+AGG 0.526962 tig0020524:-18431 Msa1382720:intron
GAATTGGGGACACCATTGAC+TGG 0.528334 tig0020524:-16073 Msa1382720:intron
ACTTTCAGGTACCTGATCAT+GGG 0.529886 tig0020524:+16317 None:intergenic
CCTCTGAACCTCGCCTTCCA+TGG 0.531389 tig0020524:+19083 None:intergenic
TGAGTGTTGATGGATCTTGT+GGG 0.531477 tig0020524:-15729 Msa1382720:CDS
CCATGGAAGGCGAGGTTCAG+AGG 0.531993 tig0020524:-19083 Msa1382720:intron
TAGCTCAAATCTCATGTGGT+TGG 0.532832 tig0020524:-16166 Msa1382720:CDS
CAAAATGGTCAACTTGGACT+TGG 0.533513 tig0020524:-18478 Msa1382720:CDS
TGATTATGCCTTGTGTTCCA+AGG 0.536578 tig0020524:-14619 Msa1382720:three_prime_UTR
CTTGGGGAAGAGGCACAAAT+GGG 0.536718 tig0020524:-16103 Msa1382720:CDS
TGGTCTTGGTTGCTTGTGGA+TGG 0.537950 tig0020524:-17191 Msa1382720:CDS
TTTAGATGTTGACAGGTGGA+AGG 0.538054 tig0020524:+20570 None:intergenic
GTTGGTGATGATGTTTGGCA+TGG 0.541070 tig0020524:-20710 Msa1382720:five_prime_UTR
GATGTCAGAGAGAACAGTAA+TGG 0.542543 tig0020524:+20512 None:intergenic
GGTGGACAGCTTTATGGGTG+GGG 0.547003 tig0020524:-16664 Msa1382720:CDS
AGATATAAGAAGTACACGGC+GGG 0.547374 tig0020524:+20328 None:intergenic
AAAGTTGCAGTGTGACAAGA+TGG 0.547745 tig0020524:-17211 Msa1382720:intron
TGGAGCAAATATGGCCAACT+GGG 0.547790 tig0020524:-17120 Msa1382720:CDS
AAAAGGAGAGCTGTACGGAT+GGG 0.548759 tig0020524:-17559 Msa1382720:CDS
ACGATACGGAAACTTGGGAT+TGG 0.548781 tig0020524:-17529 Msa1382720:CDS
CTCTCAACAACATCACCACC+TGG 0.550619 tig0020524:-20452 Msa1382720:five_prime_UTR
TATGATTTGGCAGGCGCCGG+TGG 0.552497 tig0020524:-14961 Msa1382720:intron
CCACTGTTTGGCAGTTACCA+TGG 0.553521 tig0020524:-19100 Msa1382720:CDS
TGGAAATGTTGTTTGCTCGT+GGG 0.555067 tig0020524:-19917 Msa1382720:CDS
ATATTCTTTCAGGTATCAGG+TGG 0.555232 tig0020524:-16715 Msa1382720:intron
GGAAATGTTGTTTGCTCGTG+GGG 0.560614 tig0020524:-19916 Msa1382720:CDS
TGCAGACAGATAAACCAGTT+GGG 0.560778 tig0020524:-14548 Msa1382720:three_prime_UTR
CACAATCTCCATGTCCCAGT+TGG 0.564256 tig0020524:+17106 None:intergenic
ATGCAGACAGATAAACCAGT+TGG 0.564808 tig0020524:-14549 Msa1382720:three_prime_UTR
CTAAAGGCCTGAAGCTTGTG+AGG 0.564834 tig0020524:+17069 None:intergenic
CTCTCTCTATCTATACAACC+AGG 0.567566 tig0020524:+20434 None:intergenic
AACTGCATATCTCTCAGCTA+AGG 0.570270 tig0020524:+15485 None:intergenic
CCTATCAAAATGGTTGCTGC+TGG 0.571430 tig0020524:-17609 Msa1382720:CDS
TCTCTCAGCTAAGGAGGCCA+AGG 0.572357 tig0020524:+15494 None:intergenic
AAAGGAGAGCTGTACGGATG+GGG 0.572568 tig0020524:-17558 Msa1382720:CDS
GCAGTGTGACAAGATGGTCT+TGG 0.573350 tig0020524:-17205 Msa1382720:intron
GTGAACTATACACATATGGA+TGG 0.576434 tig0020524:-17140 Msa1382720:CDS
TTGGTGATGATGTTTGGCAT+GGG 0.578600 tig0020524:-20709 Msa1382720:five_prime_UTR
AAAGACAATGTATATTCTTG+GGG 0.579488 tig0020524:-16119 Msa1382720:CDS
TGTAATGCTCTAATAGGCTG+AGG 0.581079 tig0020524:+19159 None:intergenic
TGTTTGGCAGTTACCATGGA+AGG 0.586867 tig0020524:-19096 Msa1382720:CDS
GAGAATGCTGAATTGAGCAT+AGG 0.587682 tig0020524:+20595 None:intergenic
ACTGTAAAGGACAATCATGC+AGG 0.591032 tig0020524:-20384 Msa1382720:exon
TAGATTTAGATGTTGACAGG+TGG 0.591364 tig0020524:+20566 None:intergenic
TGGGGACGATACGGAAACTT+GGG 0.594899 tig0020524:-17534 Msa1382720:CDS
ACAATGTGCATTCAATGTGT+GGG 0.595795 tig0020524:+20682 None:intergenic
TTGCTCGTGGGGTAGAGGAG+AGG 0.597342 tig0020524:-19905 Msa1382720:CDS
AAATATGGCCAACTGGGACA+TGG 0.597855 tig0020524:-17114 Msa1382720:CDS
TGGAAGTATATAGTTGGGGA+TGG 0.599445 tig0020524:-19753 Msa1382720:intron
GGCAGTTACCATGGAAGGCG+AGG 0.600503 tig0020524:-19091 Msa1382720:CDS
AAAGTGGAAGCTCATCCCCA+TGG 0.600708 tig0020524:+14802 None:intergenic
GAGGATGGACAATTAGGTCA+TGG 0.602961 tig0020524:-19886 Msa1382720:CDS
CCACCCATAAAGCTGTCCAC+CGG 0.604441 tig0020524:+16666 None:intergenic
AGGATAAAGCAAATTGCTTG+CGG 0.606207 tig0020524:-19129 Msa1382720:CDS
TCCAATGCACTGAGTTGAGT+AGG 0.608501 tig0020524:+19841 None:intergenic
AAATGGGCAACTTGGAATTG+GGG 0.608616 tig0020524:-16087 Msa1382720:CDS
AACAATGTGCATTCAATGTG+TGG 0.613712 tig0020524:+20681 None:intergenic
TGCTGGTGCTGAACATAGTG+TGG 0.615304 tig0020524:-17592 Msa1382720:CDS
AAGTGGAAGCTCATCCCCAT+GGG 0.619634 tig0020524:+14803 None:intergenic
GCACTACAACTGTGGTGGTG+AGG 0.626473 tig0020524:-20770 Msa1382720:five_prime_UTR
CCGGTGGACAGCTTTATGGG+TGG 0.627783 tig0020524:-16666 Msa1382720:CDS
CTTTCAGGTACCTGATCATG+GGG 0.628990 tig0020524:+16318 None:intergenic
TGCATATCTCTCAGCTAAGG+AGG 0.637048 tig0020524:+15488 None:intergenic
AACGGGCACTACAACTGTGG+TGG 0.644400 tig0020524:-20775 None:intergenic
TCATCCCCATGGGACTGATG+AGG 0.645675 tig0020524:+14813 None:intergenic
ACTGGGACATGGAGATTGTG+AGG 0.645964 tig0020524:-17103 Msa1382720:CDS
CAATGTGCATTCAATGTGTG+GGG 0.647922 tig0020524:+20683 None:intergenic
TCTTGGTTGCTTGTGGATGG+CGG 0.650620 tig0020524:-17188 Msa1382720:CDS
AAAGTAGCTCAAATCTCATG+TGG 0.653271 tig0020524:-16170 Msa1382720:CDS
GCAATATTTCTCATAATGTG+GGG 0.653297 tig0020524:+14736 None:intergenic
ATAAGAAGTACACGGCGGGG+TGG 0.653839 tig0020524:+20332 None:intergenic
GAATTCTCCTAAGATTATCG+AGG 0.654505 tig0020524:-15755 Msa1382720:CDS
TCGTGGGGTAGAGGAGAGGA+TGG 0.655198 tig0020524:-19901 Msa1382720:CDS
GTACTTCTTATATCTGCTGG+TGG 0.655573 tig0020524:-20320 Msa1382720:CDS
AAACTGCCTGAGTTAGCCAC+CGG 0.661262 tig0020524:+14945 None:intergenic
TACAGATAAGAGCAACAGAG+TGG 0.666333 tig0020524:+20294 None:intergenic
CAGCAGATATAAGAAGTACA+CGG 0.673323 tig0020524:+20324 None:intergenic
CCATGGTAACTGCCAAACAG+TGG 0.677616 tig0020524:+19100 None:intergenic
AAAGTGGAAGTATATAGTTG+GGG 0.684905 tig0020524:-19757 Msa1382720:CDS
TGGCACAAGGGAGTCCTCTG+TGG 0.685405 tig0020524:+18453 None:intergenic
ACTATGGCACTCACAACCGG+TGG 0.686912 tig0020524:-16682 Msa1382720:CDS
TCTGCCTCATCAGTCCCATG+GGG 0.687873 tig0020524:-14817 Msa1382720:three_prime_UTR
GTAAAGGACAATCATGCAGG+AGG 0.691266 tig0020524:-20381 Msa1382720:exon
TGAAATAAAAGTTTAACACG+AGG 0.692829 tig0020524:+14652 None:intergenic
GATATAAGAAGTACACGGCG+GGG 0.702378 tig0020524:+20329 None:intergenic
ATGTGCATTCAATGTGTGGG+GGG 0.706836 tig0020524:+20685 None:intergenic
ATTATGAGAAATATTGCATG+TGG 0.710401 tig0020524:-14730 Msa1382720:three_prime_UTR
AATGTGCATTCAATGTGTGG+GGG 0.716286 tig0020524:+20684 None:intergenic
ACTTGGACTTGGCACCACAG+AGG 0.738924 tig0020524:-18467 Msa1382720:CDS
TCTCTATCTATACAACCAGG+TGG 0.748763 tig0020524:+20437 None:intergenic
CAGATATAAGAAGTACACGG+CGG 0.750534 tig0020524:+20327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCAAAAAAAAAAAAAAAAA+GGG + tig0020524:14908-14927 None:intergenic 10.0%
!! AAGCAAAAAAAAAAAAAAAA+AGG + tig0020524:14909-14928 None:intergenic 10.0%
!!! AGTGTTTTTTTTTTTTTTTT+TGG + tig0020524:17362-17381 None:intergenic 10.0%
!! AAAACAATATTCAATAAAAA+AGG + tig0020524:18244-18263 None:intergenic 10.0%
!!! TTTTTTATTGAATATTGTTT+TGG - tig0020524:18243-18262 Msa1382720:intron 10.0%
!!! AAGTTTTAATTTCTATTTTT+TGG - tig0020524:20717-20736 Msa1382720:five_prime_UTR 10.0%
!!! AGTTTTAATTTCTATTTTTT+GGG - tig0020524:20718-20737 Msa1382720:five_prime_UTR 10.0%
!!! AAAAAAAGTTAAGCTTTTTA+TGG + tig0020524:14860-14879 None:intergenic 15.0%
!!! AGTTTAAATTTTTGATAGAA+TGG - tig0020524:15039-15058 Msa1382720:intron 15.0%
!! TCAAAACAAATAAATCAAAA+GGG + tig0020524:15067-15086 None:intergenic 15.0%
!! ATCAAAACAAATAAATCAAA+AGG + tig0020524:15068-15087 None:intergenic 15.0%
!!! ATCTTATTTTGATTTTTTCA+GGG - tig0020524:15890-15909 Msa1382720:intron 15.0%
!! AAAAGGAAATTAAAAAAATG+GGG + tig0020524:16235-16254 None:intergenic 15.0%
!! GAAAAGGAAATTAAAAAAAT+GGG + tig0020524:16236-16255 None:intergenic 15.0%
!! AGAAAAGGAAATTAAAAAAA+TGG + tig0020524:16237-16256 None:intergenic 15.0%
!! AAACAAATCTAATTCATAAA+GGG + tig0020524:16385-16404 None:intergenic 15.0%
!!! ATTCAATATTCCATTTTTAA+AGG - tig0020524:16436-16455 Msa1382720:intron 15.0%
!! AAAGGAAAAAAAAAAATCAA+AGG + tig0020524:16590-16609 None:intergenic 15.0%
!! AGAAATAAAAATTAAACAGT+TGG + tig0020524:18905-18924 None:intergenic 15.0%
!! TATTATAAACTTGTATGATT+TGG - tig0020524:20145-20164 Msa1382720:intron 15.0%
!! ATGAAGAATAAGGAAAAAAA+TGG - tig0020524:14387-14406 Msa1382720:three_prime_UTR 20.0%
!!! TTATTATCTCTTTTTCTCAT+TGG - tig0020524:14467-14486 Msa1382720:three_prime_UTR 20.0%
!!! TGAAAAGTTTGATTTTTTCA+TGG - tig0020524:14956-14975 Msa1382720:intron 20.0%
!! TGCTATAACATTATATAGAA+TGG - tig0020524:15411-15430 Msa1382720:intron 20.0%
!! GCTATAACATTATATAGAAT+GGG - tig0020524:15412-15431 Msa1382720:intron 20.0%
!! TAGTGTCATGAAATATATTA+TGG - tig0020524:15837-15856 Msa1382720:intron 20.0%
!!! GATCTTATTTTGATTTTTTC+AGG - tig0020524:15889-15908 Msa1382720:intron 20.0%
!!! TCTTATTTTGATTTTTTCAG+GGG - tig0020524:15891-15910 Msa1382720:intron 20.0%
!! GAAACAAATCTAATTCATAA+AGG + tig0020524:16386-16405 None:intergenic 20.0%
!! AATAATCAATCAATACACAA+TGG - tig0020524:16775-16794 Msa1382720:intron 20.0%
!!! TTTTAAACTTGCTTTGAAAA+GGG + tig0020524:16844-16863 None:intergenic 20.0%
!!! CTTTCTTTCATGTTTTTAAA+TGG + tig0020524:17325-17344 None:intergenic 20.0%
!! TAATTATTCCATTATCTACT+GGG - tig0020524:17457-17476 Msa1382720:intron 20.0%
!!! ATGTAAATTTTGATGTTGTA+GGG - tig0020524:17483-17502 Msa1382720:intron 20.0%
!! TTAGAATATGATACATCTAT+TGG - tig0020524:17689-17708 Msa1382720:intron 20.0%
!! ACAAATTAACTTATCACTAA+AGG + tig0020524:18069-18088 None:intergenic 20.0%
!! ACAATATTCAATAAAAAAGG+TGG + tig0020524:18241-18260 None:intergenic 20.0%
!! TAAGATAGGAATAAAAATTG+CGG + tig0020524:18299-18318 None:intergenic 20.0%
!!! TGTTGCTTTAATTAAAAAGA+TGG - tig0020524:18639-18658 Msa1382720:intron 20.0%
!!! ATTTTAACAAAATAACGAGA+CGG + tig0020524:18845-18864 None:intergenic 20.0%
!! AAAAAGACAATGTATATTCT+TGG - tig0020524:18998-19017 Msa1382720:intron 20.0%
!! AAAAGACAATGTATATTCTT+GGG - tig0020524:18999-19018 Msa1382720:intron 20.0%
!! TGAGTTCATATAAAATATGA+AGG + tig0020524:19149-19168 None:intergenic 20.0%
!!! TATTTTATATGAACTCACTT+AGG - tig0020524:19152-19171 Msa1382720:CDS 20.0%
!! ATCTAAATTACACTATGAAA+TGG + tig0020524:19522-19541 None:intergenic 20.0%
!! AATTAAAACTTCATCATAAG+AGG + tig0020524:20708-20727 None:intergenic 20.0%
! AGAATAAGGAAAAAAATGGT+TGG - tig0020524:14391-14410 Msa1382720:three_prime_UTR 25.0%
!!! AGTTTGATTTTTTCATGGAA+TGG - tig0020524:14961-14980 Msa1382720:intron 25.0%
! TCACAACAAATACATCAAAA+GGG + tig0020524:14989-15008 None:intergenic 25.0%
! ATCACAACAAATACATCAAA+AGG + tig0020524:14990-15009 None:intergenic 25.0%
!! ATTCTGAAAATCTTTCATGT+GGG - tig0020524:15008-15027 Msa1382720:intron 25.0%
!!! ATTCTGAAATTTTTGCCATT+TGG - tig0020524:15086-15105 Msa1382720:intron 25.0%
!!! TTCTGAAATTTTTGCCATTT+GGG - tig0020524:15087-15106 Msa1382720:intron 25.0%
!! AAAAGTGGAAGTATATAGTT+GGG - tig0020524:15361-15380 Msa1382720:intron 25.0%
! TTATAGCAGTCAAAAAGAAA+AGG + tig0020524:15399-15418 None:intergenic 25.0%
!!! ACATTATATAGAATGGGTTA+TGG - tig0020524:15418-15437 Msa1382720:intron 25.0%
! TTTACAGATATCCAAGATAT+AGG + tig0020524:15508-15527 None:intergenic 25.0%
! TTGGATATCTGTAAAAATGT+CGG - tig0020524:15513-15532 Msa1382720:intron 25.0%
! TTCATCTTGAGTATGAATAA+AGG + tig0020524:15570-15589 None:intergenic 25.0%
!! GTAATGAGTTTTCGTAATAA+TGG + tig0020524:15727-15746 None:intergenic 25.0%
!! ATTTTCGATGTGAACAATAA+TGG + tig0020524:15818-15837 None:intergenic 25.0%
! AACAGAGACAGATAAAAATT+CGG + tig0020524:16076-16095 None:intergenic 25.0%
! AAAAAAAACTTAACTGATGC+AGG + tig0020524:16128-16147 None:intergenic 25.0%
!! TTATTTCTTAGATGCATGTA+TGG + tig0020524:16417-16436 None:intergenic 25.0%
!! TGCATTGATACCTTTAAAAA+TGG + tig0020524:16449-16468 None:intergenic 25.0%
!!! TTTAAACTTGCTTTGAAAAG+GGG + tig0020524:16843-16862 None:intergenic 25.0%
!!! GTTTTAAACTTGCTTTGAAA+AGG + tig0020524:16845-16864 None:intergenic 25.0%
!! ATCCTCAATCTATTTTCTAT+TGG - tig0020524:17015-17034 Msa1382720:intron 25.0%
! AATAGAAAAAGAGCAAGTTA+AGG + tig0020524:17200-17219 None:intergenic 25.0%
!!! TTAACTTGCTCTTTTTCTAT+TGG - tig0020524:17199-17218 Msa1382720:CDS 25.0%
! AAAAACATGAAAGAAAGAAG+CGG - tig0020524:17328-17347 Msa1382720:intron 25.0%
! CTAATTATTCCATTATCTAC+TGG - tig0020524:17456-17475 Msa1382720:intron 25.0%
!!! CATGTAAATTTTGATGTTGT+AGG - tig0020524:17482-17501 Msa1382720:intron 25.0%
! AGATGTATCATATTCTAATC+AGG + tig0020524:17687-17706 None:intergenic 25.0%
! ATGATACATCTATTGGAATT+TGG - tig0020524:17696-17715 Msa1382720:intron 25.0%
!!! TAGTGATAAGTTAATTTGTC+AGG - tig0020524:18070-18089 Msa1382720:intron 25.0%
!! TGGCAATTTAGCATATTTTT+AGG - tig0020524:18126-18145 Msa1382720:intron 25.0%
!!! TTATTGAATATTGTTTTGGC+TGG - tig0020524:18247-18266 Msa1382720:intron 25.0%
! AAGATAGGAATAAAAATTGC+GGG + tig0020524:18298-18317 None:intergenic 25.0%
! AACTTTGCTTATATTCTTTC+AGG - tig0020524:18394-18413 Msa1382720:intron 25.0%
! ACAAACTTTCACATTATATG+AGG + tig0020524:18518-18537 None:intergenic 25.0%
! TTGATTTACAAACACAACAA+AGG - tig0020524:18558-18577 Msa1382720:intron 25.0%
! TGATTTACAAACACAACAAA+GGG - tig0020524:18559-18578 Msa1382720:intron 25.0%
! ACTAAAATCAAAGGAGAAAT+AGG + tig0020524:18722-18741 None:intergenic 25.0%
!!! TTTCTCCTTTGATTTTAGTT+TGG - tig0020524:18723-18742 Msa1382720:intron 25.0%
! AAAGACAATGTATATTCTTG+GGG - tig0020524:19000-19019 Msa1382720:intron 25.0%
!!! TAGGAGACATTCTTTTATTT+TGG - tig0020524:19171-19190 Msa1382720:CDS 25.0%
! GTTGTAAAGATACATTTCAA+AGG - tig0020524:19193-19212 Msa1382720:CDS 25.0%
!!! TAGTTAATAGAGTCGTTTTT+TGG - tig0020524:19333-19352 Msa1382720:intron 25.0%
! TATGAAATGGTACTAATATC+AGG + tig0020524:19509-19528 None:intergenic 25.0%
!! GATGTTATCTTTTTCTTTCT+AGG + tig0020524:19772-19791 None:intergenic 25.0%
! AAAAAGATAACATCAACTTG+TGG - tig0020524:19778-19797 Msa1382720:CDS 25.0%
! ATCTGTATTATGAGAACTTT+AGG - tig0020524:19806-19825 Msa1382720:CDS 25.0%
! ATAAGTTGTCAATCAAAACA+GGG + tig0020524:19857-19876 None:intergenic 25.0%
! AATAAGTTGTCAATCAAAAC+AGG + tig0020524:19858-19877 None:intergenic 25.0%
!! TTTTGTAGCAATATCAAACT+CGG + tig0020524:20245-20264 None:intergenic 25.0%
! AATAGCCAAAATGATAAAAG+TGG + tig0020524:20336-20355 None:intergenic 25.0%
! TGCAATATTTCTCATAATGT+GGG + tig0020524:20387-20406 None:intergenic 25.0%
! ATGCAATATTTCTCATAATG+TGG + tig0020524:20388-20407 None:intergenic 25.0%
! ATTATGAGAAATATTGCATG+TGG - tig0020524:20389-20408 Msa1382720:exon 25.0%
! TGAAATAAAAGTTTAACACG+AGG + tig0020524:20470-20489 None:intergenic 25.0%
! ATGCTTGAATAGTTAAGTAT+TGG - tig0020524:20624-20643 Msa1382720:five_prime_UTR 25.0%
! AATGAACTTGCATAACTTAA+TGG + tig0020524:20759-20778 None:intergenic 25.0%
GTTAGAAGAGATGAAGAATA+AGG - tig0020524:14377-14396 Msa1382720:three_prime_UTR 30.0%
AGATAGATTTAGATGTTGAC+AGG + tig0020524:14559-14578 None:intergenic 30.0%
TGTGAAACTGTTTACTGTAA+AGG - tig0020524:14722-14741 Msa1382720:three_prime_UTR 30.0%
! TTTGCTTGATTCTGAAAATC+TGG - tig0020524:14922-14941 Msa1382720:CDS 30.0%
!! ATTCTGAAAATCTGGCATTT+TGG - tig0020524:14930-14949 Msa1382720:CDS 30.0%
! GATTCTGAAAATCTTTCATG+TGG - tig0020524:15007-15026 Msa1382720:intron 30.0%
! TGAAAAGTTAGGCTTTTTAG+TGG - tig0020524:15113-15132 Msa1382720:intron 30.0%
!!! TGATAGTTTTTGAGTTTGTG+TGG - tig0020524:15150-15169 Msa1382720:intron 30.0%
!!! TTTTTGAGTTTGTGTGGTTA+TGG - tig0020524:15156-15175 Msa1382720:intron 30.0%
! CAAATTGTATCTGTTGTTTG+TGG - tig0020524:15308-15327 Msa1382720:intron 30.0%
! CAAAAGTGGAAGTATATAGT+TGG - tig0020524:15360-15379 Msa1382720:intron 30.0%
! AAAGTGGAAGTATATAGTTG+GGG - tig0020524:15362-15381 Msa1382720:intron 30.0%
!! TATATAGAATGGGTTATGGA+TGG - tig0020524:15422-15441 Msa1382720:intron 30.0%
TTATACTTGCACCTATATCT+TGG - tig0020524:15494-15513 Msa1382720:CDS 30.0%
AGATGAACTGAAGTTTGATT+TGG - tig0020524:15583-15602 Msa1382720:intron 30.0%
! GATGAACTGAAGTTTGATTT+GGG - tig0020524:15584-15603 Msa1382720:intron 30.0%
!! ATGAACTGAAGTTTGATTTG+GGG - tig0020524:15585-15604 Msa1382720:intron 30.0%
!! ATAATGGATCAGATACTGAA+TGG + tig0020524:15711-15730 None:intergenic 30.0%
!! ATAATGGATCAGATACTGAA+TGG + tig0020524:15711-15730 None:intergenic 30.0%
AATCCTTGTAATGCTCTAAT+AGG + tig0020524:15969-15988 None:intergenic 30.0%
! TTAGAGCATTACAAGGATTA+AGG - tig0020524:15970-15989 Msa1382720:intron 30.0%
TTCAGTAAATGGACAAGAAA+AGG + tig0020524:16252-16271 None:intergenic 30.0%
TTGTCCATTTACTGAAAGAA+GGG - tig0020524:16256-16275 Msa1382720:intron 30.0%
TAAACCCTTCTTTCAGTAAA+TGG + tig0020524:16263-16282 None:intergenic 30.0%
ATTTACTGAAAGAAGGGTTT+AGG - tig0020524:16262-16281 Msa1382720:intron 30.0%
TATCCTCACAGAATAAAACA+AGG + tig0020524:16481-16500 None:intergenic 30.0%
CTTCAATGAGTAGAGATAAA+AGG + tig0020524:16608-16627 None:intergenic 30.0%
TTATCTCTACTCATTGAAGT+TGG - tig0020524:16609-16628 Msa1382720:intron 30.0%
TATCTCTACTCATTGAAGTT+GGG - tig0020524:16610-16629 Msa1382720:intron 30.0%
! TGGAATGTTTGAATCTTTTG+TGG + tig0020524:16689-16708 None:intergenic 30.0%
ACAAAAGATTCAAACATTCC+AGG - tig0020524:16688-16707 Msa1382720:CDS 30.0%
CTAGCTAATCTAAATGTTCT+AGG + tig0020524:16944-16963 None:intergenic 30.0%
! GAACATTTAGATTAGCTAGA+TGG - tig0020524:16945-16964 Msa1382720:intron 30.0%
! CGACAATCAAAACTTTTAGA+TGG - tig0020524:16972-16991 Msa1382720:intron 30.0%
GACCAATAGAAAATAGATTG+AGG + tig0020524:17020-17039 None:intergenic 30.0%
! TTTTATGTGAGGTTTCTTTC+AGG + tig0020524:17115-17134 None:intergenic 30.0%
! GGTTAGTAATGTTTTATGTG+AGG + tig0020524:17126-17145 None:intergenic 30.0%
AAAACATGAAAGAAAGAAGC+GGG - tig0020524:17329-17348 Msa1382720:intron 30.0%
TGTACATGCATACTAATAGA+TGG - tig0020524:17842-17861 Msa1382720:intron 30.0%
GTCCTTTAATTATAAGCAGT+TGG - tig0020524:18095-18114 Msa1382720:intron 30.0%
CACCAACTGCTTATAATTAA+AGG + tig0020524:18100-18119 None:intergenic 30.0%
!!! AGCATATTTTTAGGTTGCAT+TGG - tig0020524:18135-18154 Msa1382720:intron 30.0%
!!! GCATATTTTTAGGTTGCATT+GGG - tig0020524:18136-18155 Msa1382720:intron 30.0%
!!! CATATTTTTAGGTTGCATTG+GGG - tig0020524:18137-18156 Msa1382720:intron 30.0%
GGATTAAAAACAAAACAGTG+TGG + tig0020524:18220-18239 None:intergenic 30.0%
TATCTTAGAACTTGCAAACT+GGG - tig0020524:18312-18331 Msa1382720:intron 30.0%
! CTTATATTCTTTCAGGTATC+AGG - tig0020524:18401-18420 Msa1382720:intron 30.0%
CTTGTCCAAACTAAAATCAA+AGG + tig0020524:18731-18750 None:intergenic 30.0%
!!! TGATTTTAGTTTGGACAAGT+TGG - tig0020524:18732-18751 Msa1382720:intron 30.0%
!! TATTTCTGCATGCTTTTGTT+TGG - tig0020524:18918-18937 Msa1382720:intron 30.0%
TCTAAACCTAGTAACATTGT+TGG - tig0020524:19077-19096 Msa1382720:intron 30.0%
CTAAACCTAGTAACATTGTT+GGG - tig0020524:19078-19097 Msa1382720:intron 30.0%
TCATAGTTGCCACAAAATAA+AGG + tig0020524:19247-19266 None:intergenic 30.0%
TCAAACACAGATCATTTATC+AGG - tig0020524:19428-19447 Msa1382720:intron 30.0%
CGGCAGAAAATATAATACAA+AGG + tig0020524:19483-19502 None:intergenic 30.0%
! GTTGTATTTTTCCCCTAAAT+AGG - tig0020524:19597-19616 Msa1382720:intron 30.0%
ACTTCTAAACTTAAGACTGA+AGG - tig0020524:19698-19717 Msa1382720:intron 30.0%
CTTCTAAACTTAAGACTGAA+GGG - tig0020524:19699-19718 Msa1382720:intron 30.0%
! ATAAACTTGTATGATTTGGC+AGG - tig0020524:20149-20168 Msa1382720:intron 30.0%
!! AGCTTCCACTTTTATCATTT+TGG - tig0020524:20328-20347 Msa1382720:CDS 30.0%
GCAATATTTCTCATAATGTG+GGG + tig0020524:20386-20405 None:intergenic 30.0%
! TTTCTCTACTTTCTTTTCCT+TGG + tig0020524:20520-20539 None:intergenic 30.0%
GGAAAAGAAAGTAGAGAAAT+AGG - tig0020524:20521-20540 Msa1382720:five_prime_UTR 30.0%
!! AAATGGTTGGTGATGATGTT+TGG - tig0020524:14404-14423 Msa1382720:three_prime_UTR 35.0%
ACAATGTGCATTCAATGTGT+GGG + tig0020524:14440-14459 None:intergenic 35.0%
AACAATGTGCATTCAATGTG+TGG + tig0020524:14441-14460 None:intergenic 35.0%
TAGATTTAGATGTTGACAGG+TGG + tig0020524:14556-14575 None:intergenic 35.0%
AAAAGACGAGAGAAGAGTTT+GGG + tig0020524:14584-14603 None:intergenic 35.0%
ATGTCAGAGAGAACAGTAAT+GGG + tig0020524:14609-14628 None:intergenic 35.0%
! CAGCAGATATAAGAAGTACA+CGG + tig0020524:14798-14817 None:intergenic 35.0%
! CTAACTTTTCACAACCCAAA+TGG + tig0020524:15104-15123 None:intergenic 35.0%
!! CATTTGGGTTGTGAAAAGTT+AGG - tig0020524:15102-15121 Msa1382720:intron 35.0%
!! AGTTAGGCTTTTTAGTGGAA+TGG - tig0020524:15118-15137 Msa1382720:intron 35.0%
TGCTTATTCAGAGTCAAAAG+TGG - tig0020524:15346-15365 Msa1382720:intron 35.0%
!! TGAACTGAAGTTTGATTTGG+GGG - tig0020524:15586-15605 Msa1382720:intron 35.0%
AGGATAAAGCAAATTGCTTG+CGG - tig0020524:15990-16009 Msa1382720:intron 35.0%
CTTGTCCATTTACTGAAAGA+AGG - tig0020524:16255-16274 Msa1382720:intron 35.0%
AGAGTCTGTCACAAAAATCT+AGG + tig0020524:16329-16348 None:intergenic 35.0%
!!! AGTCCTTGTTTTATTCTGTG+AGG - tig0020524:16475-16494 Msa1382720:intron 35.0%
AGGATAAATCAGTCTTCCAT+CGG - tig0020524:16495-16514 Msa1382720:intron 35.0%
ATCTGCATCATGAAATCAGT+TGG - tig0020524:16544-16563 Msa1382720:intron 35.0%
ATCTCTACTCATTGAAGTTG+GGG - tig0020524:16611-16630 Msa1382720:intron 35.0%
! TTGAATCTTTTGTGGCACAA+GGG + tig0020524:16681-16700 None:intergenic 35.0%
! TTTGAATCTTTTGTGGCACA+AGG + tig0020524:16682-16701 None:intergenic 35.0%
! AACATTCCAGGTACTCTTTT+CGG - tig0020524:16700-16719 Msa1382720:CDS 35.0%
TACTTTCACCGTATACCTAA+TGG - tig0020524:16803-16822 Msa1382720:intron 35.0%
TGGACAAACACACATTATGA+CGG + tig0020524:17147-17166 None:intergenic 35.0%
! ATGTGTGTTTGTCCATTTTG+AGG - tig0020524:17152-17171 Msa1382720:CDS 35.0%
AAAAAGAGCAAGTTAAGGCA+GGG + tig0020524:17195-17214 None:intergenic 35.0%
! TTTCTATTGGCTAAGAGTCT+TGG - tig0020524:17212-17231 Msa1382720:intron 35.0%
ACATCAACAGAAACTTTCTC+TGG + tig0020524:17639-17658 None:intergenic 35.0%
AAGCAAGACTTAGACAATGA+GGG + tig0020524:17884-17903 None:intergenic 35.0%
ACAATATCTGTTTCATCGTC+TGG - tig0020524:17957-17976 Msa1382720:intron 35.0%
TCTGGTGAACTATACACATA+TGG - tig0020524:17975-17994 Msa1382720:intron 35.0%
GTGAACTATACACATATGGA+TGG - tig0020524:17979-17998 Msa1382720:intron 35.0%
ACATATGGATGGAGCAAATA+TGG - tig0020524:17990-18009 Msa1382720:intron 35.0%
AAATATGCTAAATTGCCACC+CGG + tig0020524:18124-18143 None:intergenic 35.0%
!! CAGTTTGCAAGTTCTAAGAT+AGG + tig0020524:18313-18332 None:intergenic 35.0%
CTATCTTAGAACTTGCAAAC+TGG - tig0020524:18311-18330 Msa1382720:intron 35.0%
! ATATTCTTTCAGGTATCAGG+TGG - tig0020524:18404-18423 Msa1382720:intron 35.0%
ACACAACAAAGGGTTACATT+CGG - tig0020524:18569-18588 Msa1382720:intron 35.0%
! GTAATGGAGTTTCAACTTTC+AGG + tig0020524:18819-18838 None:intergenic 35.0%
AATAACGAGACGGATAGTAA+TGG + tig0020524:18835-18854 None:intergenic 35.0%
AAAGTAGCTCAAATCTCATG+TGG - tig0020524:18949-18968 Msa1382720:intron 35.0%
AATGTATATTCTTGGGGAAG+AGG - tig0020524:19006-19025 Msa1382720:intron 35.0%
TAGAAGCAATTACCAGTCAA+TGG + tig0020524:19061-19080 None:intergenic 35.0%
ATACTCCCAACAATGTTACT+AGG + tig0020524:19086-19105 None:intergenic 35.0%
!! GTAACATTGTTGGGAGTATT+AGG - tig0020524:19087-19106 Msa1382720:CDS 35.0%
!! TGAAACAGTTGATTTGTTCG+CGG - tig0020524:19216-19235 Msa1382720:intron 35.0%
! ATAGCCTTAGACTCAAGTAT+TGG - tig0020524:19290-19309 Msa1382720:intron 35.0%
! TAGCCTTAGACTCAAGTATT+GGG - tig0020524:19291-19310 Msa1382720:intron 35.0%
!!! GAGTCGTTTTTTGGATTTGT+AGG - tig0020524:19342-19361 Msa1382720:intron 35.0%
GAATTCTCCTAAGATTATCG+AGG - tig0020524:19364-19383 Msa1382720:intron 35.0%
ATGGTACTAATATCAGGTCA+CGG + tig0020524:19503-19522 None:intergenic 35.0%
! CCAAGGTTTTTCCTATTTAG+GGG + tig0020524:19611-19630 None:intergenic 35.0%
! GCCAAGGTTTTTCCTATTTA+GGG + tig0020524:19612-19631 None:intergenic 35.0%
! GAGAACTTTAGGAGTATACA+TGG - tig0020524:19817-19836 Msa1382720:CDS 35.0%
GTATACATGGTCATTTGAGT+TGG - tig0020524:19830-19849 Msa1382720:CDS 35.0%
AAGATATCTCAGAGAGCTTA+TGG - tig0020524:19978-19997 Msa1382720:intron 35.0%
AAGTCAATTGAAACATGCCT+TGG - tig0020524:20098-20117 Msa1382720:intron 35.0%
GATGCATCATTCTTGTCAAA+TGG + tig0020524:20271-20290 None:intergenic 35.0%
! TTTCTTTTCCTTGGAACACA+AGG + tig0020524:20511-20530 None:intergenic 35.0%
!! GTTAAGTATTGGCAAGATCT+TGG - tig0020524:20635-20654 Msa1382720:five_prime_UTR 35.0%
!! TTGGTGATGATGTTTGGCAT+GGG - tig0020524:14410-14429 Msa1382720:three_prime_UTR 40.0%
AATGTGCATTCAATGTGTGG+GGG + tig0020524:14438-14457 None:intergenic 40.0%
CAATGTGCATTCAATGTGTG+GGG + tig0020524:14439-14458 None:intergenic 40.0%
GCTGAATTGAGCATAGGTTT+GGG + tig0020524:14521-14540 None:intergenic 40.0%
TGCTGAATTGAGCATAGGTT+TGG + tig0020524:14522-14541 None:intergenic 40.0%
GAGAATGCTGAATTGAGCAT+AGG + tig0020524:14527-14546 None:intergenic 40.0%
TTTAGATGTTGACAGGTGGA+AGG + tig0020524:14552-14571 None:intergenic 40.0%
GAAAAGACGAGAGAAGAGTT+TGG + tig0020524:14585-14604 None:intergenic 40.0%
GATGTCAGAGAGAACAGTAA+TGG + tig0020524:14610-14629 None:intergenic 40.0%
TCTCTATCTATACAACCAGG+TGG + tig0020524:14685-14704 None:intergenic 40.0%
CTCTCTCTATCTATACAACC+AGG + tig0020524:14688-14707 None:intergenic 40.0%
ACTGTAAAGGACAATCATGC+AGG - tig0020524:14735-14754 Msa1382720:three_prime_UTR 40.0%
! AGATATAAGAAGTACACGGC+GGG + tig0020524:14794-14813 None:intergenic 40.0%
! CAGATATAAGAAGTACACGG+CGG + tig0020524:14795-14814 None:intergenic 40.0%
CGTGTACTTCTTATATCTGC+TGG - tig0020524:14796-14815 Msa1382720:three_prime_UTR 40.0%
GTACTTCTTATATCTGCTGG+TGG - tig0020524:14799-14818 Msa1382720:three_prime_UTR 40.0%
TACAGATAAGAGCAACAGAG+TGG + tig0020524:14828-14847 None:intergenic 40.0%
!! GGCTTTTTAGTGGAATGGAT+AGG - tig0020524:15123-15142 Msa1382720:intron 40.0%
! GATGTTGATCTTTTTGCAGC+TGG - tig0020524:15182-15201 Msa1382720:intron 40.0%
! TGGAAATGTTGTTTGCTCGT+GGG - tig0020524:15202-15221 Msa1382720:intron 40.0%
! TGGAAGTATATAGTTGGGGA+TGG - tig0020524:15366-15385 Msa1382720:intron 40.0%
!! GAACTGAAGTTTGATTTGGG+GGG - tig0020524:15587-15606 Msa1382720:intron 40.0%
!!! GATTTTTTCAGGGGTGACTT+TGG - tig0020524:15900-15919 Msa1382720:intron 40.0%
TGTAATGCTCTAATAGGCTG+AGG + tig0020524:15963-15982 None:intergenic 40.0%
! CAGCCTATTAGAGCATTACA+AGG - tig0020524:15963-15982 Msa1382720:intron 40.0%
GTTCAGAGGTTTGTAGTTCT+TGG - tig0020524:16050-16069 Msa1382720:intron 40.0%
! CTGTAGCTTGCAGTAGAAAA+TGG + tig0020524:16211-16230 None:intergenic 40.0%
! CATTTTCTACTGCAAGCTAC+AGG - tig0020524:16209-16228 Msa1382720:intron 40.0%
TAGTACTTCCAAACAACCGA+TGG + tig0020524:16514-16533 None:intergenic 40.0%
TTCATGATGCAGATGACTTG+TGG + tig0020524:16538-16557 None:intergenic 40.0%
TCTCTACTCATTGAAGTTGG+GGG - tig0020524:16612-16631 Msa1382720:intron 40.0%
CGGAATCAAAATGGTCAACT+TGG - tig0020524:16635-16654 Msa1382720:intron 40.0%
CAAAATGGTCAACTTGGACT+TGG - tig0020524:16641-16660 Msa1382720:intron 40.0%
! CTTTTCGGAGATGTTCATCA+AGG - tig0020524:16715-16734 Msa1382720:intron 40.0%
!! TTGCTTTGAAAAGGGGAGAT+GGG + tig0020524:16836-16855 None:intergenic 40.0%
TTGGTCACATAAGTCCTTTG+TGG - tig0020524:17034-17053 Msa1382720:intron 40.0%
! GTTTAAATAGCCAGTGGACT+AGG + tig0020524:17081-17100 None:intergenic 40.0%
GCACATGTTTAAATAGCCAG+TGG + tig0020524:17087-17106 None:intergenic 40.0%
AAAAGAGCAAGTTAAGGCAG+GGG + tig0020524:17194-17213 None:intergenic 40.0%
GAAAAAGAGCAAGTTAAGGC+AGG + tig0020524:17196-17215 None:intergenic 40.0%
CTAAGAGTCTTGGAACTGAA+TGG - tig0020524:17222-17241 Msa1382720:intron 40.0%
TACATGAGCCCAGTAGATAA+TGG + tig0020524:17468-17487 None:intergenic 40.0%
GTAGGGACTACCTATCAAAA+TGG - tig0020524:17500-17519 Msa1382720:CDS 40.0%
ACTGAAAAAGGAGAGCTGTA+CGG - tig0020524:17555-17574 Msa1382720:CDS 40.0%
AGCAAGACTTAGACAATGAG+GGG + tig0020524:17883-17902 None:intergenic 40.0%
CAAGCAAGACTTAGACAATG+AGG + tig0020524:17885-17904 None:intergenic 40.0%
AAAGTTGCAGTGTGACAAGA+TGG - tig0020524:17908-17927 Msa1382720:intron 40.0%
! AATTATAAGCAGTTGGTGCC+CGG - tig0020524:18102-18121 Msa1382720:intron 40.0%
AATATGCTAAATTGCCACCC+GGG + tig0020524:18123-18142 None:intergenic 40.0%
TAAGACCAACTGAACAACCA+GGG + tig0020524:18173-18192 None:intergenic 40.0%
ATAAGACCAACTGAACAACC+AGG + tig0020524:18174-18193 None:intergenic 40.0%
AAAACAAAACAGTGTGGCAC+TGG + tig0020524:18214-18233 None:intergenic 40.0%
CAAACTGGGTGCAATGTATT+TGG - tig0020524:18326-18345 Msa1382720:intron 40.0%
! TAGTTTGGACAAGTTGGAGT+TGG - tig0020524:18738-18757 Msa1382720:intron 40.0%
AGTGAAATTTCCCCATGATC+AGG - tig0020524:18791-18810 Msa1382720:intron 40.0%
! ACTTTCAGGTACCTGATCAT+GGG + tig0020524:18805-18824 None:intergenic 40.0%
! AACTTTCAGGTACCTGATCA+TGG + tig0020524:18806-18825 None:intergenic 40.0%
TAGCTCAAATCTCATGTGGT+TGG - tig0020524:18953-18972 Msa1382720:intron 40.0%
ACAAATGGGCAACTTGGAAT+TGG - tig0020524:19030-19049 Msa1382720:intron 40.0%
CAAATGGGCAACTTGGAATT+GGG - tig0020524:19031-19050 Msa1382720:intron 40.0%
AAATGGGCAACTTGGAATTG+GGG - tig0020524:19032-19051 Msa1382720:intron 40.0%
CTCAAAGCCTCGATAATCTT+AGG + tig0020524:19374-19393 None:intergenic 40.0%
!! TTGAGTGTTGATGGATCTTG+TGG - tig0020524:19389-19408 Msa1382720:intron 40.0%
!! TGAGTGTTGATGGATCTTGT+GGG - tig0020524:19390-19409 Msa1382720:intron 40.0%
CCCCTAAATAGGAAAAACCT+TGG - tig0020524:19608-19627 Msa1382720:intron 40.0%
! GGCCAAGGTTTTTCCTATTT+AGG + tig0020524:19613-19632 None:intergenic 40.0%
AACTGCATATCTCTCAGCTA+AGG + tig0020524:19637-19656 None:intergenic 40.0%
GAAATGTGTCTCTCATACCA+AGG + tig0020524:20118-20137 None:intergenic 40.0%
CTAACTCAGGCAGTTTAGAT+AGG - tig0020524:20181-20200 Msa1382720:intron 40.0%
TGATTATGCCTTGTGTTCCA+AGG - tig0020524:20500-20519 Msa1382720:five_prime_UTR 40.0%
GGTTTATCTGTCTGCATTCT+AGG + tig0020524:20567-20586 None:intergenic 40.0%
ATGCAGACAGATAAACCAGT+TGG - tig0020524:20570-20589 Msa1382720:five_prime_UTR 40.0%
TGCAGACAGATAAACCAGTT+GGG - tig0020524:20571-20590 Msa1382720:five_prime_UTR 40.0%
! GTTGCTGTCTGTTGTTTAAG+TGG - tig0020524:20595-20614 Msa1382720:five_prime_UTR 40.0%
!! GTTGGTGATGATGTTTGGCA+TGG - tig0020524:14409-14428 Msa1382720:three_prime_UTR 45.0%
ATGTGCATTCAATGTGTGGG+GGG + tig0020524:14437-14456 None:intergenic 45.0%
GTAAAGGACAATCATGCAGG+AGG - tig0020524:14738-14757 Msa1382720:three_prime_UTR 45.0%
! GATATAAGAAGTACACGGCG+GGG + tig0020524:14793-14812 None:intergenic 45.0%
! CTGGAAATGTTGTTTGCTCG+TGG - tig0020524:15201-15220 Msa1382720:intron 45.0%
! GGAAATGTTGTTTGCTCGTG+GGG - tig0020524:15203-15222 Msa1382720:intron 45.0%
AGAGGAGAGGATGGACAATT+AGG - tig0020524:15227-15246 Msa1382720:intron 45.0%
GAGGATGGACAATTAGGTCA+TGG - tig0020524:15233-15252 Msa1382720:intron 45.0%
! TCCAATGCACTGAGTTGAGT+AGG + tig0020524:15281-15300 None:intergenic 45.0%
!! TTTTCAGGGGTGACTTTGGA+CGG - tig0020524:15904-15923 Msa1382720:intron 45.0%
TGTTTGGCAGTTACCATGGA+AGG - tig0020524:16023-16042 Msa1382720:intron 45.0%
AACCGACAGTGCAAGCTTAT+AGG - tig0020524:16184-16203 Msa1382720:intron 45.0%
ACCGACAGTGCAAGCTTATA+GGG - tig0020524:16185-16204 Msa1382720:intron 45.0%
AGATGCATGTATGGTGTGCA+AGG + tig0020524:16408-16427 None:intergenic 45.0%
! TCAGTCTTCCATCGGTTGTT+TGG - tig0020524:16503-16522 Msa1382720:intron 45.0%
!! ACATCTCCGAAAAGAGTACC+TGG + tig0020524:16709-16728 None:intergenic 45.0%
GCGAGAAGCCATTAGGTATA+CGG + tig0020524:16814-16833 None:intergenic 45.0%
!! CTTGCTTTGAAAAGGGGAGA+TGG + tig0020524:16837-16856 None:intergenic 45.0%
CTCTGTCTTTGATGAGATCG+TGG - tig0020524:16878-16897 Msa1382720:intron 45.0%
GTCTTTGATGAGATCGTGGA+TGG - tig0020524:16882-16901 Msa1382720:intron 45.0%
TTGATGAGATCGTGGATGGA+TGG - tig0020524:16886-16905 Msa1382720:intron 45.0%
AGATCGTGGATGGATGGAAA+AGG - tig0020524:16892-16911 Msa1382720:intron 45.0%
GATCGTGGATGGATGGAAAA+GGG - tig0020524:16893-16912 Msa1382720:intron 45.0%
! GTATTTTGTCTCGCTCCTGT+CGG + tig0020524:16922-16941 None:intergenic 45.0%
GTCACATAAGTCCTTTGTGG+AGG - tig0020524:17037-17056 Msa1382720:intron 45.0%
ATCATGCTACTCCTCCACAA+AGG + tig0020524:17051-17070 None:intergenic 45.0%
TTGTGGAGGAGTAGCATGAT+AGG - tig0020524:17051-17070 Msa1382720:CDS 45.0%
GGGAGTTGCAAACCTCAAAA+TGG + tig0020524:17167-17186 None:intergenic 45.0%
CTGAAGACTGAGAGATCAGT+TGG + tig0020524:17260-17279 None:intergenic 45.0%
CAACTGATCTCTCAGTCTTC+AGG - tig0020524:17258-17277 Msa1382720:intron 45.0%
!! CCAGCAGCAACCATTTTGAT+AGG + tig0020524:17513-17532 None:intergenic 45.0%
CCTATCAAAATGGTTGCTGC+TGG - tig0020524:17510-17529 Msa1382720:CDS 45.0%
AGTGTGGCCATCACTGAAAA+AGG - tig0020524:17543-17562 Msa1382720:CDS 45.0%
!!! CAGCTCTCCTTTTTCAGTGA+TGG + tig0020524:17553-17572 None:intergenic 45.0%
AAAAAGGAGAGCTGTACGGA+TGG - tig0020524:17559-17578 Msa1382720:CDS 45.0%
AAAAGGAGAGCTGTACGGAT+GGG - tig0020524:17560-17579 Msa1382720:CDS 45.0%
ACGATACGGAAACTTGGGAT+TGG - tig0020524:17590-17609 Msa1382720:CDS 45.0%
CGATACGGAAACTTGGGATT+GGG - tig0020524:17591-17610 Msa1382720:CDS 45.0%
GTTGATGTATGTCCTCAGAC+TGG - tig0020524:17651-17670 Msa1382720:intron 45.0%
! AAGATGGTCTTGGTTGCTTG+TGG - tig0020524:17924-17943 Msa1382720:intron 45.0%
ATGGAGCAAATATGGCCAAC+TGG - tig0020524:17998-18017 Msa1382720:intron 45.0%
TGGAGCAAATATGGCCAACT+GGG - tig0020524:17999-18018 Msa1382720:intron 45.0%
AAATATGGCCAACTGGGACA+TGG - tig0020524:18005-18024 Msa1382720:intron 45.0%
! ATTATAAGCAGTTGGTGCCC+GGG - tig0020524:18103-18122 Msa1382720:intron 45.0%
! TCTTTCAGGTATCAGGTGGT+TGG - tig0020524:18408-18427 Msa1382720:intron 45.0%
CATACTATGGCACTCACAAC+CGG - tig0020524:18434-18453 Msa1382720:CDS 45.0%
! AAAGGGTTACATTCGGTGAC+TGG - tig0020524:18576-18595 Msa1382720:intron 45.0%
TGGGGAAATTTCACTTGCAC+AGG + tig0020524:18786-18805 None:intergenic 45.0%
! CTTTCAGGTACCTGATCATG+GGG + tig0020524:18804-18823 None:intergenic 45.0%
GCACCCAATACTTGAGTCTA+AGG + tig0020524:19297-19316 None:intergenic 45.0%
!! ATCGAGGCTTTGAGTGTTGA+TGG - tig0020524:19380-19399 Msa1382720:intron 45.0%
TGCATATCTCTCAGCTAAGG+AGG + tig0020524:19634-19653 None:intergenic 45.0%
GAGACACTTACAGCTTCATC+TGG + tig0020524:19663-19682 None:intergenic 45.0%
TCCCAGAAAGCGATGTCAAA+CGG - tig0020524:20217-20236 Msa1382720:intron 45.0%
TCCGTTTGACATCGCTTTCT+GGG + tig0020524:20221-20240 None:intergenic 45.0%
ATCCGTTTGACATCGCTTTC+TGG + tig0020524:20222-20241 None:intergenic 45.0%
GATGAGGCAGAGACATTGAT+TGG + tig0020524:20293-20312 None:intergenic 45.0%
!!! CATTCTAGGCAGCTGCTTTT+TGG + tig0020524:20553-20572 None:intergenic 45.0%
!!! CATTAATTTTTATTTATTAT+TGG + tig0020524:16744-16763 None:intergenic 5.0%
! CAACTGTGGTGGTGAGGAAT+TGG - tig0020524:14355-14374 Msa1382720:three_prime_UTR 50.0%
CTCTCAACAACATCACCACC+TGG - tig0020524:14667-14686 Msa1382720:three_prime_UTR 50.0%
GCCTACTCAACTCAGTGCAT+TGG - tig0020524:15277-15296 Msa1382720:intron 50.0%
TTGCGGTGATAGCCACTGTT+TGG - tig0020524:16007-16026 Msa1382720:intron 50.0%
CCATGGTAACTGCCAAACAG+TGG + tig0020524:16022-16041 None:intergenic 50.0%
CCACTGTTTGGCAGTTACCA+TGG - tig0020524:16019-16038 Msa1382720:intron 50.0%
GCCCTATAAGCTTGCACTGT+CGG + tig0020524:16189-16208 None:intergenic 50.0%
CTACTCATTGAAGTTGGGGG+CGG - tig0020524:16615-16634 Msa1382720:intron 50.0%
AGTTGGGGGCGGAATCAAAA+TGG - tig0020524:16626-16645 Msa1382720:intron 50.0%
GATAGGCAAACCTAGTCCAC+TGG - tig0020524:17068-17087 Msa1382720:CDS 50.0%
CAAGTTAAGGCAGGGGAAGT+GGG + tig0020524:17187-17206 None:intergenic 50.0%
! TGCTGGTGCTGAACATAGTG+TGG - tig0020524:17527-17546 Msa1382720:CDS 50.0%
AAAGGAGAGCTGTACGGATG+GGG - tig0020524:17561-17580 Msa1382720:CDS 50.0%
TGGGGACGATACGGAAACTT+GGG - tig0020524:17585-17604 Msa1382720:CDS 50.0%
GGCAAGATGATACCAGTCTG+AGG + tig0020524:17666-17685 None:intergenic 50.0%
GCAGTGTGACAAGATGGTCT+TGG - tig0020524:17914-17933 Msa1382720:intron 50.0%
! TGGTCTTGGTTGCTTGTGGA+TGG - tig0020524:17928-17947 Msa1382720:intron 50.0%
TCTTGGTTGCTTGTGGATGG+CGG - tig0020524:17931-17950 Msa1382720:intron 50.0%
CACAATCTCCATGTCCCAGT+TGG + tig0020524:18016-18035 None:intergenic 50.0%
ACTGGGACATGGAGATTGTG+AGG - tig0020524:18016-18035 Msa1382720:intron 50.0%
TCTTGTGCCTCACAAGCTTC+AGG - tig0020524:18043-18062 Msa1382720:intron 50.0%
CTAAAGGCCTGAAGCTTGTG+AGG + tig0020524:18053-18072 None:intergenic 50.0%
AACTGAACAACCAGGGCGAA+GGG + tig0020524:18166-18185 None:intergenic 50.0%
!! GTGTGGCACTGGCACATATT+CGG + tig0020524:18203-18222 None:intergenic 50.0%
TTCAGGTATCAGGTGGTTGG+AGG - tig0020524:18411-18430 Msa1382720:intron 50.0%
! AGGTGGTTGGAGGCATACTA+TGG - tig0020524:18421-18440 Msa1382720:intron 50.0%
ACAACCGGTGGACAGCTTTA+TGG - tig0020524:18449-18468 Msa1382720:CDS 50.0%
! CAACCGGTGGACAGCTTTAT+GGG - tig0020524:18450-18469 Msa1382720:CDS 50.0%
TTATGGGTGGGGCTGGAATA+AGG - tig0020524:18466-18485 Msa1382720:CDS 50.0%
! TCTTGGGGAAGAGGCACAAA+TGG - tig0020524:19015-19034 Msa1382720:intron 50.0%
! CTTGGGGAAGAGGCACAAAT+GGG - tig0020524:19016-19035 Msa1382720:intron 50.0%
! AGAGGCACAAATGGGCAACT+TGG - tig0020524:19024-19043 Msa1382720:intron 50.0%
GAATTGGGGACACCATTGAC+TGG - tig0020524:19046-19065 Msa1382720:intron 50.0%
!!! GCGGCGCTACCTTTATTTTG+TGG - tig0020524:19235-19254 Msa1382720:intron 50.0%
! TTGTATGATTTGGCAGGCGC+CGG - tig0020524:20155-20174 Msa1382720:intron 50.0%
AAACTGCCTGAGTTAGCCAC+CGG + tig0020524:20177-20196 None:intergenic 50.0%
CTCAGGCAGTTTAGATAGGC+TGG - tig0020524:20185-20204 Msa1382720:intron 50.0%
!! CATCGCTTTCTGGGACACTA+AGG + tig0020524:20212-20231 None:intergenic 50.0%
AAGTGGAAGCTCATCCCCAT+GGG + tig0020524:20319-20338 None:intergenic 50.0%
AAAGTGGAAGCTCATCCCCA+TGG + tig0020524:20320-20339 None:intergenic 50.0%
AACAGACAGCAACTCCCAAC+TGG + tig0020524:20588-20607 None:intergenic 50.0%
! ATAAGAAGTACACGGCGGGG+TGG + tig0020524:14790-14809 None:intergenic 55.0%
GTTGTTTGCTCGTGGGGTAG+AGG - tig0020524:15209-15228 Msa1382720:intron 55.0%
TTTGGGGGGCAGAAAGAGAC+TGG - tig0020524:15601-15620 Msa1382720:intron 55.0%
AGGGGTGACTTTGGACGGTT+GGG - tig0020524:15909-15928 Msa1382720:intron 55.0%
GACTTTGGACGGTTGGGTCA+TGG - tig0020524:15915-15934 Msa1382720:intron 55.0%
ACTTGGACTTGGCACCACAG+AGG - tig0020524:16652-16671 Msa1382720:intron 55.0%
GAGATGGGCGAGAAGCCATT+AGG + tig0020524:16821-16840 None:intergenic 55.0%
GATGGAAAAGGGAAGCCGAC+AGG - tig0020524:16904-16923 Msa1382720:intron 55.0%
GCAAGTTAAGGCAGGGGAAG+TGG + tig0020524:17188-17207 None:intergenic 55.0%
CTGGGGACGATACGGAAACT+TGG - tig0020524:17584-17603 Msa1382720:CDS 55.0%
CAACTGAACAACCAGGGCGA+AGG + tig0020524:18167-18186 None:intergenic 55.0%
CTTCGCCCTGGTTGTTCAGT+TGG - tig0020524:18165-18184 Msa1382720:intron 55.0%
!! TGGCACTGGCACATATTCGG+TGG + tig0020524:18200-18219 None:intergenic 55.0%
ACTATGGCACTCACAACCGG+TGG - tig0020524:18437-18456 Msa1382720:CDS 55.0%
CCACCCATAAAGCTGTCCAC+CGG + tig0020524:18456-18475 None:intergenic 55.0%
! CGGTGGACAGCTTTATGGGT+GGG - tig0020524:18454-18473 Msa1382720:CDS 55.0%
! GGTGGACAGCTTTATGGGTG+GGG - tig0020524:18455-18474 Msa1382720:CDS 55.0%
TCTCTCAGCTAAGGAGGCCA+AGG + tig0020524:19628-19647 None:intergenic 55.0%
TCTCTGCCTCATCAGTCCCA+TGG - tig0020524:20300-20319 Msa1382720:CDS 55.0%
CTCTGCCTCATCAGTCCCAT+GGG - tig0020524:20301-20320 Msa1382720:CDS 55.0%
TCTGCCTCATCAGTCCCATG+GGG - tig0020524:20302-20321 Msa1382720:CDS 55.0%
TCATCCCCATGGGACTGATG+AGG + tig0020524:20309-20328 None:intergenic 55.0%
TTGCTCGTGGGGTAGAGGAG+AGG - tig0020524:15214-15233 Msa1382720:intron 60.0%
TCGTGGGGTAGAGGAGAGGA+TGG - tig0020524:15218-15237 Msa1382720:intron 60.0%
CAGGGGTGACTTTGGACGGT+TGG - tig0020524:15908-15927 Msa1382720:intron 60.0%
GGCAGTTACCATGGAAGGCG+AGG - tig0020524:16028-16047 Msa1382720:intron 60.0%
CCTCTGAACCTCGCCTTCCA+TGG + tig0020524:16039-16058 None:intergenic 60.0%
CCATGGAAGGCGAGGTTCAG+AGG - tig0020524:16036-16055 Msa1382720:intron 60.0%
TGGCACAAGGGAGTCCTCTG+TGG + tig0020524:16669-16688 None:intergenic 60.0%
AGAGCTGTACGGATGGGGCT+GGG - tig0020524:17566-17585 Msa1382720:CDS 60.0%
! ATAAGCAGTTGGTGCCCGGG+TGG - tig0020524:18106-18125 Msa1382720:intron 60.0%
ATTGGGGTTTCCCTTCGCCC+TGG - tig0020524:18153-18172 Msa1382720:intron 60.0%
! CCGGTGGACAGCTTTATGGG+TGG - tig0020524:18453-18472 Msa1382720:CDS 60.0%
! GACAGCTTTATGGGTGGGGC+TGG - tig0020524:18459-18478 Msa1382720:CDS 60.0%
!! TATGATTTGGCAGGCGCCGG+TGG - tig0020524:20158-20177 Msa1382720:intron 60.0%
TGGAGGTGGAGAAGCGGTGG+TGG + tig0020524:14770-14789 None:intergenic 65.0%
! AGAAGTACACGGCGGGGTGG+AGG + tig0020524:14787-14806 None:intergenic 65.0%
GAGAGCTGTACGGATGGGGC+TGG - tig0020524:17565-17584 Msa1382720:CDS 65.0%
GAGCTGTACGGATGGGGCTG+GGG - tig0020524:17567-17586 Msa1382720:CDS 65.0%
GGATGGGGCTGGGGACGATA+CGG - tig0020524:17576-17595 Msa1382720:CDS 65.0%
GGGTGGAGGTGGAGAAGCGG+TGG + tig0020524:14773-14792 None:intergenic 70.0%
GCGGGGTGGAGGTGGAGAAG+CGG + tig0020524:14776-14795 None:intergenic 70.0%
AGTACACGGCGGGGTGGAGG+TGG + tig0020524:14784-14803 None:intergenic 70.0%
!! CAGGCGCCGGTGGCTAACTC+AGG - tig0020524:20168-20187 Msa1382720:intron 70.0%
Chromosome Type Strat End Strand Name
tig0020524 gene 14351 20790 14351 ID=Msa1382720;Name=Msa1382720
tig0020524 mRNA 14351 20790 14351 ID=Msa1382720-mRNA-1;Parent=Msa1382720;Name=Msa1382720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=400|1|1|1|1|1|12|539|439
tig0020524 exon 14351 14970 14351 ID=Msa1382720-mRNA-1:exon:8324;Parent=Msa1382720-mRNA-1
tig0020524 exon 15470 15522 15470 ID=Msa1382720-mRNA-1:exon:8323;Parent=Msa1382720-mRNA-1
tig0020524 exon 15692 15777 15692 ID=Msa1382720-mRNA-1:exon:8322;Parent=Msa1382720-mRNA-1
tig0020524 exon 16074 16192 16074 ID=Msa1382720-mRNA-1:exon:8321;Parent=Msa1382720-mRNA-1
tig0020524 exon 16329 16400 16329 ID=Msa1382720-mRNA-1:exon:8320;Parent=Msa1382720-mRNA-1
tig0020524 exon 16654 16725 16654 ID=Msa1382720-mRNA-1:exon:8319;Parent=Msa1382720-mRNA-1
tig0020524 exon 17050 17223 17050 ID=Msa1382720-mRNA-1:exon:8318;Parent=Msa1382720-mRNA-1
tig0020524 exon 17485 17637 17485 ID=Msa1382720-mRNA-1:exon:8317;Parent=Msa1382720-mRNA-1
tig0020524 exon 18432 18513 18432 ID=Msa1382720-mRNA-1:exon:8316;Parent=Msa1382720-mRNA-1
tig0020524 exon 19084 19230 19084 ID=Msa1382720-mRNA-1:exon:8315;Parent=Msa1382720-mRNA-1
tig0020524 exon 19754 19940 19754 ID=Msa1382720-mRNA-1:exon:8314;Parent=Msa1382720-mRNA-1
tig0020524 exon 20297 20790 20297 ID=Msa1382720-mRNA-1:exon:8313;Parent=Msa1382720-mRNA-1
tig0020524 five_prime_UTR 20391 20790 20391 ID=Msa1382720-mRNA-1:five_prime_utr;Parent=Msa1382720-mRNA-1
tig0020524 CDS 20297 20390 20297 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 19754 19940 19754 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 19084 19230 19084 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 18432 18513 18432 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 17485 17637 17485 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 17050 17223 17050 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 16654 16725 16654 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 16329 16400 16329 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 16074 16192 16074 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 15692 15777 15692 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 15470 15522 15470 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 CDS 14890 14970 14890 ID=Msa1382720-mRNA-1:cds;Parent=Msa1382720-mRNA-1
tig0020524 three_prime_UTR 14351 14889 14351 ID=Msa1382720-mRNA-1:three_prime_utr;Parent=Msa1382720-mRNA-1
Gene Sequence

>Msa1382720

ATGCAGGAGGTTGAAGCCACCACCGCTTCTCCACCTCCACCCCGCCGTGTACTTCTTATATCTGCTGGTGGTAGCCACTCTGTTGCTCTTATCTCTGGAAATGTTGTTTGCTCGTGGGGTAGAGGAGAGGATGGACAATTAGGTCATGGTGATACTGATGATAGACTTTTGCCTACTCAACTCAGTGCATTGGATGCTCAACAAATTGTATCTGTTGTTTGTGGAGCTGATCATACTCTTGCTTATTCAGAGTCAAAAGTGGAAGTATATAGTTGGGGATGGGGTGACTTTGGACGGTTGGGTCATGGTAATTCTAGTGATTTGTTCATTCCTCAGCCTATTAGAGCATTACAAGGATTAAGGATAAAGCAAATTGCTTGCGGTGATAGCCACTGTTTGGCAGTTACCATGGAAGGCGAGGTTCAGAGTTGGGGGCGGAATCAAAATGGTCAACTTGGACTTGGCACCACAGAGGACTCCCTTGTGCCACAAAAGATTCAAACATTCCAGGGACTACCTATCAAAATGGTTGCTGCTGGTGCTGAACATAGTGTGGCCATCACTGAAAAAGGAGAGCTGTACGGATGGGGCTGGGGACGATACGGAAACTTGGGATTGGGAGATAGAAATGATCGATGTATTCCAGAGAAAGTTTCTGTTGATTGTGACAAGATGGTCTTGGTTGCTTGTGGATGGCGGCATACAATATCTGTTTCATCGTCTGGTGAACTATACACATATGGATGGAGCAAATATGGCCAACTGGGACATGGAGATTGTGAGGATCATCTTGTGCCTCACAAGCTTCAGGCCTTTAGTGATAAGTTAATTTGTCAGGTATCAGGTGGTTGGAGGCATACTATGGCACTCACAACCGGTGGACAGCTTTATGGGTGGGGCTGGAATAAGTTTGGACAAGTTGGAGTTGGTGACAATGTTGATCGCTGCTCTCCTGTGCAAGTGAAATTTCCCCATGATCAGAAAGTAGCTCAAATCTCATGTGGTTGGAGACACACAATTGCTGTTACTGAAAAAGACAATGTATATTCTTGGGGAAGAGGCACAAATGGGCAACTTGGAATTGGGGACACCATTGACTGGAATTCTCCTAAGATTATCGAGGCTTTGAGTGTTGATGGATCTTGTGGGCAGCACATAGAATCTTCAAACACAGATCATTTATCAGGAAAAACCTTGGCCTCCTTAGCTGAGAGATATGCAGTTGTACCAGATGAAGCTGCGCCGGTGGCTAACTCAGGCAGTTTAGATAGGCTGGACCTTAGTGTCCCAGAAAGCGATGTCAAACGGATCCGAGTTTGA
Protein sequence

>Msa1382720

MQEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGLPIKMVAAGAEHSVAITEKGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCEDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNSPKIIEALSVDGSCGQHIESSNTDHLSGKTLASLAERYAVVPDEAAPVANSGSLDRLDLSVPESDVKRIRV*