AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0298940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0298940 MtrunA17_Chr2g0285501 89.358 545 20 3 1 512 1 540 0.0 936
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0298940 AT2G34640.1 67.360 481 132 7 47 512 54 524 0.0 596

Find 172 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTCTGCCATGGCTTTC+AGG 0.119391 2_3:-53209170 None:intergenic
ATTGGTCCATATTGTAATTT+TGG 0.131461 2_3:+53214563 Msa0298940:three_prime_UTR
TACAAACTTGATAAGAAATT+TGG 0.179469 2_3:+53208714 Msa0298940:CDS
AGTTATAGAACTTCGGTTTC+TGG 0.190994 2_3:+53208543 Msa0298940:CDS
TTCAGAAAAGGCAGCATATT+TGG 0.203050 2_3:-53211287 None:intergenic
GGACCCTCTTTCTTTGGTTT+TGG 0.220328 2_3:-53214106 None:intergenic
ACTGGACAAGTGAAGCTTTA+TGG 0.248269 2_3:+53209189 Msa0298940:CDS
GTCATAGGACCCTCTTTCTT+TGG 0.255328 2_3:-53214112 None:intergenic
TGGTCAGCTTGAGCCGGCCT+CGG 0.298482 2_3:+53208380 Msa0298940:CDS
AGGTCTTCTCCTTTGCCATC+TGG 0.310172 2_3:-53208844 None:intergenic
TGAACTCCTCAAAATCTTCT+TGG 0.331732 2_3:-53208641 None:intergenic
GAACTCCTCAAAATCTTCTT+GGG 0.335718 2_3:-53208640 None:intergenic
AAGACATTAATTAAATGATA+AGG 0.336185 2_3:+53207106 Msa0298940:five_prime_UTR
TAGTTCACAGTTGGATAAAC+TGG 0.336700 2_3:-53211206 None:intergenic
TTTGCACCAAAATTACAATA+TGG 0.347566 2_3:-53214569 None:intergenic
TGAAGTTTGGAACCTGAAAA+TGG 0.349145 2_3:-53207268 None:intergenic
AAGGAACTGTTGAGCAAGTC+AGG 0.349440 2_3:+53208442 Msa0298940:CDS
AAGTACATGAAGTCCTAAAA+TGG 0.349716 2_3:-53214648 None:intergenic
CTGAAAGCCATGGCAGAAAC+TGG 0.351942 2_3:+53209171 Msa0298940:CDS
GATACCCCTCTGCATTCATT+TGG 0.367850 2_3:+53214459 Msa0298940:three_prime_UTR
TACTCAGTCTCTTCTTCCTC+AGG 0.369922 2_3:-53208693 None:intergenic
AGCCAGGCGCCATCTTTATA+AGG 0.370611 2_3:+53209248 Msa0298940:CDS
AGAGGTAGTAGGAGAGGAAG+AGG 0.377843 2_3:+53213446 Msa0298940:CDS
TGAGGCTGAGCAAGAGAAAC+TGG 0.379393 2_3:+53209617 Msa0298940:CDS
CTGGACCATTGTTCTTTCTC+CGG 0.380043 2_3:-53208825 None:intergenic
CACGATACTCTCGGTCAGTT+TGG 0.387384 2_3:-53209776 None:intergenic
ACCTTTCTTCCTTATAAAGA+TGG 0.390163 2_3:-53209257 None:intergenic
AGACATTAATTAAATGATAA+GGG 0.399800 2_3:+53207107 Msa0298940:five_prime_UTR
TCAGGCCAATACTCAACTTC+AGG 0.401061 2_3:-53208420 None:intergenic
TGTTGAGGGGAATGTTGAAT+TGG 0.402287 2_3:+53208584 Msa0298940:CDS
CACTTGTCCAGTTTCTGCCA+TGG 0.404280 2_3:-53209178 None:intergenic
ATGGCTAAAGCAGTCGATAT+TGG 0.407859 2_3:+53213247 Msa0298940:CDS
GAGTCCATGTAACTATAATA+AGG 0.410808 2_3:-53208351 None:intergenic
CGGTAGTCAATCACTTCATC+TGG 0.411124 2_3:-53211239 None:intergenic
CGTTATGTTGTAGACTAAAC+AGG 0.420589 2_3:+53214263 Msa0298940:three_prime_UTR
GTGAGGAACTGTGGTGGAAT+TGG 0.423424 2_3:+53208796 Msa0298940:CDS
TGCTAGGGCGCCTACTCCGA+TGG 0.427715 2_3:+53208467 Msa0298940:CDS
CATTCTGAATAGTACGCAAT+TGG 0.430427 2_3:-53209651 None:intergenic
GAACCTCACTGATTTCCTCT+TGG 0.431695 2_3:+53214162 Msa0298940:CDS
ACTTGCTCAACAGTTCCTTC+AGG 0.432258 2_3:-53208438 None:intergenic
CTCGTAAGTGTTCCTTCTAT+CGG 0.436600 2_3:-53208774 None:intergenic
ACAGCCTCATCCAGTGTCAT+AGG 0.439222 2_3:-53214127 None:intergenic
GGTCAGCTTGAGCCGGCCTC+GGG 0.440018 2_3:+53208381 Msa0298940:CDS
AAACTAACCGTTTCAGTGTC+AGG 0.440574 2_3:-53208864 None:intergenic
CCGAGAGTATCGTGTAATGA+TGG 0.442203 2_3:+53209785 Msa0298940:CDS
TTGTAAGTTGTAAACTCTCT+TGG 0.446489 2_3:+53214669 Msa0298940:three_prime_UTR
GGACAAGTTGGGTAGAAGAT+TGG 0.453163 2_3:-53207240 None:intergenic
TTGAGCAAGTCAGGGCTGCT+AGG 0.454849 2_3:+53208451 Msa0298940:CDS
TCGCATCCGAAGGGATCCTT+TGG 0.458415 2_3:+53209818 Msa0298940:CDS
GAAAGAGGGTCCTATGACAC+TGG 0.467982 2_3:+53214117 Msa0298940:CDS
AGTAGGAGAGGAAGAGGAAG+AGG 0.468716 2_3:+53213452 Msa0298940:CDS
TTGTTGTCAAGAAGTACATA+AGG 0.472241 2_3:-53214432 None:intergenic
CTTCTTTCTGCAGTATGGGG+TGG 0.477880 2_3:+53211179 Msa0298940:intron
AAAATAACCTCCTTCAGAAA+AGG 0.478180 2_3:-53211299 None:intergenic
GTTGATGTTGAAGAGGTAGT+AGG 0.478672 2_3:+53213435 Msa0298940:CDS
CATGTAGACATCAACATACT+TGG 0.483842 2_3:+53208158 Msa0298940:intron
TCGTTAGGTTCTCCGTCATA+TGG 0.484863 2_3:+53208495 Msa0298940:CDS
GGCAATTTACAAAGTAGAGT+TGG 0.486421 2_3:+53208189 Msa0298940:CDS
TGTTGAAGAGGTAGTAGGAG+AGG 0.489920 2_3:+53213440 Msa0298940:CDS
AGTTACATGGACTCCACCTC+TGG 0.490851 2_3:+53208360 Msa0298940:CDS
TCCTCCGAGGGTAATGTTGA+GGG 0.493412 2_3:+53208570 Msa0298940:CDS
AAAATGGTTGAAGGACAAGT+TGG 0.496890 2_3:-53207252 None:intergenic
GAACTTAGAAAATATTAACT+AGG 0.498792 2_3:+53214481 Msa0298940:three_prime_UTR
CAATTGCGTACTATTCAGAA+TGG 0.504878 2_3:+53209652 Msa0298940:CDS
TTCCTCCGAGGGTAATGTTG+AGG 0.505354 2_3:+53208569 Msa0298940:CDS
AAACTGCTCTTTACCGAGCC+AGG 0.506007 2_3:+53209232 Msa0298940:CDS
ATCCTTTGGCAATGAGAATG+AGG 0.506775 2_3:+53209832 Msa0298940:CDS
TTCCTTATAAAGATGGCGCC+TGG 0.506882 2_3:-53209250 None:intergenic
GCAGAAGCTGAAACGTCGTC+CGG 0.507290 2_3:-53207187 None:intergenic
CAGAAGCACTTCGAAGAGAC+TGG 0.507894 2_3:+53209714 Msa0298940:CDS
CACCTCTGGTCAGCTTGAGC+CGG 0.515556 2_3:+53208374 Msa0298940:CDS
CTTTATTGACCAGGATGAAG+AGG 0.515558 2_3:+53213404 Msa0298940:intron
CGAGAGTATCGTGTAATGAT+GGG 0.518857 2_3:+53209786 Msa0298940:CDS
TAACTCTTCCTCCTACTACC+AGG 0.519268 2_3:-53208525 None:intergenic
TGGGGTTCAACCAAAACCTC+AGG 0.519701 2_3:-53208621 None:intergenic
GCCATCTTTATAAGGAAGAA+AGG 0.521390 2_3:+53209256 Msa0298940:CDS
AAAGGCAGCATATTTGGTGT+TGG 0.523847 2_3:-53211281 None:intergenic
AAGTGGTATACTTCAGAAGT+AGG 0.525135 2_3:+53214234 Msa0298940:three_prime_UTR
TATAAAGATGGCGCCTGGCT+CGG 0.525875 2_3:-53209245 None:intergenic
TGAGCAAGTCAGGGCTGCTA+GGG 0.527597 2_3:+53208452 Msa0298940:CDS
ACTCCGATGGGAGAATCGTT+AGG 0.529478 2_3:+53208480 Msa0298940:CDS
TTAAATGATAAGGGAGGGTG+TGG 0.529948 2_3:+53207116 Msa0298940:five_prime_UTR
GTTTCTGGTTCTTCCTCCGA+GGG 0.530417 2_3:+53208558 Msa0298940:CDS
ACCAAAACCTCAGGAAAACC+AGG 0.534846 2_3:-53208612 None:intergenic
ACGTTTCAGCTTCTGCAAAA+CGG 0.535017 2_3:+53207194 Msa0298940:five_prime_UTR
GGGTCCTATGACACTGGATG+AGG 0.535860 2_3:+53214123 Msa0298940:CDS
TCTTGAATATAGTTCACAGT+TGG 0.536657 2_3:-53211215 None:intergenic
TTCGGATCAATAAATGGATG+AGG 0.537349 2_3:-53208741 None:intergenic
TGGAACCTGAAAATGGTTGA+AGG 0.538548 2_3:-53207261 None:intergenic
GAGGAAGAGTTATAGAACTT+CGG 0.541827 2_3:+53208536 Msa0298940:CDS
GCTAGGGCGCCTACTCCGAT+GGG 0.542290 2_3:+53208468 Msa0298940:CDS
GCAGCCAAAACCAAAGAAAG+AGG 0.542396 2_3:+53214102 Msa0298940:intron
GTATTCCTGAAGTTGAGTAT+TGG 0.542969 2_3:+53208415 Msa0298940:CDS
GAGTTGAGTGAGCTTCTCTC+CGG 0.543862 2_3:+53207168 Msa0298940:five_prime_UTR
GAAGTTGAGTATTGGCCTGA+AGG 0.544418 2_3:+53208423 Msa0298940:CDS
CAAGAGAAACTGGAAAGGAT+TGG 0.544926 2_3:+53209627 Msa0298940:CDS
AAACATTTCAATTAGTTGAG+TGG 0.546235 2_3:-53209748 None:intergenic
CATCTTATGCAACTATATGA+AGG 0.548090 2_3:-53208237 None:intergenic
TCCACCTTATTATAGTTACA+TGG 0.548590 2_3:+53208347 Msa0298940:CDS
AAATGGTTGAAGGACAAGTT+GGG 0.548730 2_3:-53207251 None:intergenic
TCAACATACTTGGTGGGTGT+TGG 0.550157 2_3:+53208168 Msa0298940:CDS
TGTTGTCAAGAAGTACATAA+GGG 0.551290 2_3:-53214431 None:intergenic
GATACTCTCGGTCAGTTTGG+TGG 0.552011 2_3:-53209773 None:intergenic
ATGGTAGTAACCCTGGTAGT+AGG 0.556214 2_3:+53208514 Msa0298940:CDS
GACAGACATCGATGAAGCTA+TGG 0.556862 2_3:+53213228 Msa0298940:CDS
GAGAAGACCTGACACTGAAA+CGG 0.558802 2_3:+53208857 Msa0298940:CDS
ATACTCTCGGTCAGTTTGGT+GGG 0.561825 2_3:-53209772 None:intergenic
AATTGCGTACTATTCAGAAT+GGG 0.563735 2_3:+53209653 Msa0298940:CDS
GGCTTGAATTGAAGACATAA+CGG 0.566463 2_3:-53207219 None:intergenic
GGACTGATGTTCGCATCCGA+AGG 0.566579 2_3:+53209808 Msa0298940:CDS
ATTCAGAATGGGTAAAGGCA+TGG 0.569529 2_3:+53209664 Msa0298940:CDS
CATGGAACATGCGCTTCACG+AGG 0.572556 2_3:-53214209 None:intergenic
TAGTGATGTTGATGTTGAAG+AGG 0.575406 2_3:+53213428 Msa0298940:CDS
ATTAATTAAATGATAAGGGA+GGG 0.576879 2_3:+53207111 Msa0298940:five_prime_UTR
CATTAATTAAATGATAAGGG+AGG 0.582031 2_3:+53207110 Msa0298940:five_prime_UTR
CCGTCATATGGTAGTAACCC+TGG 0.586388 2_3:+53208507 Msa0298940:CDS
GCAAAAGACTGAACAAGTTG+AGG 0.586413 2_3:+53212253 Msa0298940:CDS
AGCGCATGTTCCATGAAAAG+TGG 0.586757 2_3:+53214217 Msa0298940:three_prime_UTR
TCCCTCATTCTCATTGCCAA+AGG 0.587340 2_3:-53209834 None:intergenic
TTCAGTGGCAATAACTCAAG+TGG 0.587930 2_3:-53214383 None:intergenic
AACTCTTCCTCCTACTACCA+GGG 0.587983 2_3:-53208524 None:intergenic
TCATTGCCAAAGGATCCCTT+CGG 0.589078 2_3:-53209824 None:intergenic
AAGTTCCAAATGAATGCAGA+GGG 0.591425 2_3:-53214464 None:intergenic
GGTTTCTGGTTCTTCCTCCG+AGG 0.591665 2_3:+53208557 Msa0298940:CDS
CGGCTCAAGCTGACCAGAGG+TGG 0.592856 2_3:-53208373 None:intergenic
AGAAAGAACAATGGTCCAGA+TGG 0.596412 2_3:+53208829 Msa0298940:CDS
ATAAGAATACAAACTACTTG+AGG 0.599617 2_3:-53214619 None:intergenic
GTAGACATCAACATACTTGG+TGG 0.599655 2_3:+53208161 Msa0298940:intron
GTACTATTCAGAATGGGTAA+AGG 0.599998 2_3:+53209659 Msa0298940:CDS
GGCCGGCTCAAGCTGACCAG+AGG 0.603831 2_3:-53208376 None:intergenic
GACTGATGTTCGCATCCGAA+GGG 0.605543 2_3:+53209809 Msa0298940:CDS
AGAGCAGTTTCTGTTAACGT+TGG 0.606934 2_3:-53209219 None:intergenic
CTTGCTCTAGCACCCGAGGC+CGG 0.609918 2_3:-53208393 None:intergenic
GAACCTAACGATTCTCCCAT+CGG 0.610317 2_3:-53208483 None:intergenic
GTGGTGGAATTGGAGAAAGC+CGG 0.612355 2_3:+53208806 Msa0298940:CDS
ATGAAGTGATTGACTACCGA+GGG 0.612510 2_3:+53211243 Msa0298940:CDS
AATGTTGAATTGGATGACCC+TGG 0.613925 2_3:+53208594 Msa0298940:CDS
AGAAGGAACACTTACGAGTG+AGG 0.614697 2_3:+53208779 Msa0298940:CDS
AACTCCTCAAAATCTTCTTG+GGG 0.616044 2_3:-53208639 None:intergenic
CCATCATTACACGATACTCT+CGG 0.616131 2_3:-53209785 None:intergenic
ATTCCCCTCAACATTACCCT+CGG 0.618187 2_3:-53208574 None:intergenic
GTAGTAACCCTGGTAGTAGG+AGG 0.618481 2_3:+53208517 Msa0298940:CDS
TGTTTATCAGTCTGAGCCTG+AGG 0.618831 2_3:+53208677 Msa0298940:CDS
AACGATTCTCCCATCGGAGT+AGG 0.619729 2_3:-53208477 None:intergenic
TCCTTTGGCAATGAGAATGA+GGG 0.620133 2_3:+53209833 Msa0298940:CDS
TAGACATCAACATACTTGGT+GGG 0.620442 2_3:+53208162 Msa0298940:intron
ATTCTTCTTCAAAATCCAAG+AGG 0.624158 2_3:-53214177 None:intergenic
CTGAGCAAGAGAAACTGGAA+AGG 0.626625 2_3:+53209622 Msa0298940:CDS
CAGCCAAAACCAAAGAAAGA+GGG 0.628174 2_3:+53214103 Msa0298940:intron
GTTCATGAAAATCTGCCCCT+CGG 0.630667 2_3:-53211259 None:intergenic
AGGAACTGTTGAGCAAGTCA+GGG 0.634307 2_3:+53208443 Msa0298940:CDS
AACAATGGTCCAGATGGCAA+AGG 0.635970 2_3:+53208835 Msa0298940:CDS
TAAGTTCCAAATGAATGCAG+AGG 0.637959 2_3:-53214465 None:intergenic
GGAACATGCGCTTCACGAGG+AGG 0.640899 2_3:-53214206 None:intergenic
CCTCCGAGGGTAATGTTGAG+GGG 0.643204 2_3:+53208571 Msa0298940:CDS
CACTTACGAGTGAGGAACTG+TGG 0.647512 2_3:+53208787 Msa0298940:CDS
AGACTGATAAACAACATAGT+CGG 0.650698 2_3:-53208667 None:intergenic
TCCATGTAACTATAATAAGG+TGG 0.654364 2_3:-53208348 None:intergenic
TCAGTGGCAATAACTCAAGT+GGG 0.662084 2_3:-53214382 None:intergenic
AATACTTGCTCTAGCACCCG+AGG 0.666722 2_3:-53208397 None:intergenic
ATGACACTGGATGAGGCTGT+AGG 0.670072 2_3:+53214130 Msa0298940:CDS
GAGAGTATCGTGTAATGATG+GGG 0.670714 2_3:+53209787 Msa0298940:CDS
TTTGGCAATGAGAATGAGGG+AGG 0.675932 2_3:+53209836 Msa0298940:CDS
CCAGGGTTACTACCATATGA+CGG 0.681449 2_3:-53208507 None:intergenic
CCCCTCAACATTACCCTCGG+AGG 0.683343 2_3:-53208571 None:intergenic
TTACGAGTGAGGAACTGTGG+TGG 0.692991 2_3:+53208790 Msa0298940:CDS
GATGAAGTGATTGACTACCG+AGG 0.693562 2_3:+53211242 Msa0298940:CDS
GAAAGCCGGAGAAAGAACAA+TGG 0.713371 2_3:+53208820 Msa0298940:CDS
CCAAAACCTCAGGAAAACCA+GGG 0.716482 2_3:-53208611 None:intergenic
AATCCAAGAGGAAATCAGTG+AGG 0.723459 2_3:-53214165 None:intergenic
TGAAGTGATTGACTACCGAG+GGG 0.765362 2_3:+53211244 Msa0298940:CDS
AGTTCCAAATGAATGCAGAG+GGG 0.771955 2_3:-53214463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACATTAAATAAAATATCA+AGG - chr2_3:53211011-53211030 None:intergenic 10.0%
!! ATCTTTACATAAAATAAATA+TGG + chr2_3:53211407-53211426 Msa0298940:intron 10.0%
!!! AAGTCAAATTTTTTAAAATA+TGG - chr2_3:53211612-53211631 None:intergenic 10.0%
!! ATCATAATAATTAAATTTAG+AGG - chr2_3:53211813-53211832 None:intergenic 10.0%
!! AAGACATTAATTAAATGATA+AGG + chr2_3:53207106-53207125 Msa0298940:five_prime_UTR 15.0%
!! AGACATTAATTAAATGATAA+GGG + chr2_3:53207107-53207126 Msa0298940:five_prime_UTR 15.0%
!! CTAATTGAATTTATAATGTT+TGG + chr2_3:53207816-53207835 Msa0298940:intron 15.0%
!!! AATTTCTCTATAATATTTTC+AGG + chr2_3:53209143-53209162 Msa0298940:intron 15.0%
!! GTGATTAAAATCATAAATTA+AGG + chr2_3:53209484-53209503 Msa0298940:intron 15.0%
!!! TCATTCCTTTTTTTTATATA+CGG - chr2_3:53210643-53210662 None:intergenic 15.0%
!!! AATTTTATTGAATTTTGTCT+TGG + chr2_3:53210736-53210755 Msa0298940:intron 15.0%
!! CACATATTTCATAAAAATAT+TGG - chr2_3:53212133-53212152 None:intergenic 15.0%
!!! CAATATTTTTATGAAATATG+TGG + chr2_3:53212131-53212150 Msa0298940:intron 15.0%
!! TTAACTTATAATTGAAAATC+TGG + chr2_3:53212556-53212575 Msa0298940:intron 15.0%
!! TTTCAATATCCTAAAAATAT+TGG + chr2_3:53214545-53214564 Msa0298940:three_prime_UTR 15.0%
!! ATTAATTAAATGATAAGGGA+GGG + chr2_3:53207111-53207130 Msa0298940:five_prime_UTR 20.0%
!! AAAGGTAAATAATTGAAGTT+TGG - chr2_3:53207284-53207303 None:intergenic 20.0%
!!! GTTTAAGAAATAGTATTGAA+AGG - chr2_3:53207302-53207321 None:intergenic 20.0%
!! GAATTAATGAAATGAATAGT+GGG - chr2_3:53207324-53207343 None:intergenic 20.0%
!! TGAATTAATGAAATGAATAG+TGG - chr2_3:53207325-53207344 None:intergenic 20.0%
!!! CTATATATCTTGTTTCATTA+TGG + chr2_3:53207425-53207444 Msa0298940:intron 20.0%
!! AATATGGAATGACATAAAAA+AGG + chr2_3:53207866-53207885 Msa0298940:intron 20.0%
!!! TTTTTTCAATTAAGATAGCA+AGG + chr2_3:53207908-53207927 Msa0298940:intron 20.0%
!! AAAGTAATAAAACATAGGAT+CGG - chr2_3:53208092-53208111 None:intergenic 20.0%
!! GCTATAAAGTAATAAAACAT+AGG - chr2_3:53208097-53208116 None:intergenic 20.0%
!! TTACTTTATAGCATGTAATA+TGG + chr2_3:53208105-53208124 Msa0298940:intron 20.0%
!! TACAAACTTGATAAGAAATT+TGG + chr2_3:53208714-53208733 Msa0298940:CDS 20.0%
!!! TTAATTTTCGGATCAATAAA+TGG - chr2_3:53208750-53208769 None:intergenic 20.0%
!! AAGGTTATGCATTATTTAAA+TGG + chr2_3:53209017-53209036 Msa0298940:intron 20.0%
!! ATCAAGTAATACTAGAATTA+AGG - chr2_3:53209464-53209483 None:intergenic 20.0%
!! GTTACTTGAAAAAATTTACT+TGG + chr2_3:53209562-53209581 Msa0298940:intron 20.0%
!! TCCAATATTTAATGTAGTTA+TGG + chr2_3:53210543-53210562 Msa0298940:intron 20.0%
!! ACCATAACTACATTAAATAT+TGG - chr2_3:53210547-53210566 None:intergenic 20.0%
!! TTTGTCCGTATATAAAAAAA+AGG + chr2_3:53210635-53210654 Msa0298940:intron 20.0%
!!! TGTTTTTTCTCTGAAAAAAA+AGG - chr2_3:53210716-53210735 None:intergenic 20.0%
!!! ACTAATATATGAAGAGTTTT+GGG + chr2_3:53210869-53210888 Msa0298940:intron 20.0%
!!! AAATTTAACAATTGCTATTC+TGG - chr2_3:53211157-53211176 None:intergenic 20.0%
!! TATATATATAAGTGTCTTGT+AGG - chr2_3:53211723-53211742 None:intergenic 20.0%
!!! TAATAATGATAGTGAAGATA+TGG + chr2_3:53212307-53212326 Msa0298940:intron 20.0%
!! TGAAATACAGACATTATATA+TGG + chr2_3:53212440-53212459 Msa0298940:intron 20.0%
!!! TGATTTCATTGATTATGTTA+AGG + chr2_3:53212748-53212767 Msa0298940:intron 20.0%
!!! GATTTCATTGATTATGTTAA+GGG + chr2_3:53212749-53212768 Msa0298940:intron 20.0%
!! GTGAAGTTATTATAAAAAGT+TGG - chr2_3:53212926-53212945 None:intergenic 20.0%
!! GTAATAATTCCACAAAAAAT+TGG - chr2_3:53213114-53213133 None:intergenic 20.0%
!!! TTTTTTGTGGAATTATTACT+TGG + chr2_3:53213115-53213134 Msa0298940:intron 20.0%
!!! ACCTTTTATTATTTGCAATA+TGG + chr2_3:53213200-53213219 Msa0298940:intron 20.0%
!! AAGTTAGAAAAGTAAAAAGA+TGG - chr2_3:53213298-53213317 None:intergenic 20.0%
!! AATAAAGTAAGAAATGAAAC+AGG - chr2_3:53213391-53213410 None:intergenic 20.0%
!! AATCAAAGATTAATCGTAAT+TGG + chr2_3:53213511-53213530 Msa0298940:intron 20.0%
!! TAGCTCATATAAAAATTGTT+TGG + chr2_3:53213751-53213770 Msa0298940:intron 20.0%
!! ATTAAGTTATTTATCCAAAC+TGG + chr2_3:53213930-53213949 Msa0298940:intron 20.0%
!! TTAAGTTATTTATCCAAACT+GGG + chr2_3:53213931-53213950 Msa0298940:intron 20.0%
!! GAACTTAGAAAATATTAACT+AGG + chr2_3:53214481-53214500 Msa0298940:three_prime_UTR 20.0%
!! AAATATTAACTAGGTGAATT+TGG + chr2_3:53214490-53214509 Msa0298940:intron 20.0%
!! GAACTTAGAAAATATTAACT+AGG + chr2_3:53214481-53214500 Msa0298940:three_prime_UTR 20.0%
!!! TTCTTATTTATTGCCATTTT+AGG + chr2_3:53214635-53214654 Msa0298940:three_prime_UTR 20.0%
! CATTAATTAAATGATAAGGG+AGG + chr2_3:53207110-53207129 Msa0298940:five_prime_UTR 25.0%
! TAGCTGATAAGTTATCTTAT+AGG + chr2_3:53207471-53207490 Msa0298940:intron 25.0%
! AATTCAATTAGCTACCTTAT+CGG - chr2_3:53207807-53207826 None:intergenic 25.0%
!! TGACTAAAAAAAGACTTGTT+TGG - chr2_3:53208019-53208038 None:intergenic 25.0%
!!! TCTATCGGCTTTTTAATTTT+CGG - chr2_3:53208762-53208781 None:intergenic 25.0%
! AAAATTAAAAAGCCGATAGA+AGG + chr2_3:53208762-53208781 Msa0298940:CDS 25.0%
!! TAGTTTGCATTAAATTGTCT+TGG + chr2_3:53208881-53208900 Msa0298940:intron 25.0%
! GTAAAGGTGAATAAATTTGT+AGG - chr2_3:53208997-53209016 None:intergenic 25.0%
! CAAATTTATTCACCTTTACA+AGG + chr2_3:53208998-53209017 Msa0298940:intron 25.0%
! AATAATGCATAACCTTGTAA+AGG - chr2_3:53209013-53209032 None:intergenic 25.0%
!! ATGGTAATGTTACTAAAGAA+AGG - chr2_3:53209064-53209083 None:intergenic 25.0%
! TCTGATTAGAATTAAGAAAG+TGG + chr2_3:53209309-53209328 Msa0298940:intron 25.0%
! AAACAAGAAACTCAATAGAA+AGG + chr2_3:53209385-53209404 Msa0298940:intron 25.0%
! AGAATGAGTAAATTCGTTAA+AGG + chr2_3:53209427-53209446 Msa0298940:intron 25.0%
! AAACATTTCAATTAGTTGAG+TGG - chr2_3:53209751-53209770 None:intergenic 25.0%
! TTAAAAACTAACTATCAAGG+GGG - chr2_3:53210477-53210496 None:intergenic 25.0%
! CTTAAAAACTAACTATCAAG+GGG - chr2_3:53210478-53210497 None:intergenic 25.0%
! CCTTAAAAACTAACTATCAA+GGG - chr2_3:53210479-53210498 None:intergenic 25.0%
!!! CCTTGATAGTTAGTTTTTAA+GGG + chr2_3:53210477-53210496 Msa0298940:intron 25.0%
!! CAGTAATGTTATTTACTAGA+AGG - chr2_3:53210576-53210595 None:intergenic 25.0%
!! GACTAATATATGAAGAGTTT+TGG + chr2_3:53210868-53210887 Msa0298940:intron 25.0%
!! CTAATATATGAAGAGTTTTG+GGG + chr2_3:53210870-53210889 Msa0298940:intron 25.0%
! TGTTTCTTCATATATTATCC+AGG - chr2_3:53210921-53210940 None:intergenic 25.0%
!!! TCATATATTTAGTTTTGTCC+TGG + chr2_3:53210964-53210983 Msa0298940:intron 25.0%
! ACATCTTATGTTCAAATACT+TGG + chr2_3:53211104-53211123 Msa0298940:intron 25.0%
!! AGATTATTTAGAATCTAGAG+TGG - chr2_3:53211130-53211149 None:intergenic 25.0%
! TGAAAATTTCGATTGCTAAA+GGG + chr2_3:53211364-53211383 Msa0298940:intron 25.0%
! TAAATATGGAACATATCTTC+AGG + chr2_3:53211421-53211440 Msa0298940:intron 25.0%
! ATATATTTGAGCTTATCTAC+TGG + chr2_3:53211529-53211548 Msa0298940:intron 25.0%
! TTATAAGTAAAGACTAGAGA+TGG + chr2_3:53211931-53211950 Msa0298940:intron 25.0%
! TACAGACATTATATATGGTT+TGG + chr2_3:53212445-53212464 Msa0298940:intron 25.0%
! GACTTTCGTTTCATTATATA+TGG + chr2_3:53212478-53212497 Msa0298940:intron 25.0%
!! TTTCGTTTCATTTTATGACT+CGG + chr2_3:53212519-53212538 Msa0298940:intron 25.0%
!! ACTTTTATTAGAGTATAGCT+AGG - chr2_3:53212948-53212967 None:intergenic 25.0%
! AATATTAAGGATTGAATGAC+AGG - chr2_3:53213013-53213032 None:intergenic 25.0%
! ACTGTGGTAACAAAATATTA+AGG - chr2_3:53213026-53213045 None:intergenic 25.0%
!!! CATTAACAACCAATTTTTTG+TGG + chr2_3:53213102-53213121 Msa0298940:intron 25.0%
! AGTTCAGGTAAAATAATCAA+CGG - chr2_3:53213154-53213173 None:intergenic 25.0%
! GCCATATTGCAAATAATAAA+AGG - chr2_3:53213204-53213223 None:intergenic 25.0%
! TTTATTATTTGCAATATGGC+AGG + chr2_3:53213204-53213223 Msa0298940:intron 25.0%
!! TTACTCAAAATCAACCATTT+TGG - chr2_3:53213363-53213382 None:intergenic 25.0%
! AACAACACATAACATTAACA+GGG - chr2_3:53213611-53213630 None:intergenic 25.0%
! AAACAACACATAACATTAAC+AGG - chr2_3:53213612-53213631 None:intergenic 25.0%
!! TTTTCATAACTTATCCTAGA+TGG - chr2_3:53213724-53213743 None:intergenic 25.0%
!!! AGCTATAGTTATGTTTTGAT+AGG + chr2_3:53213805-53213824 Msa0298940:intron 25.0%
! CAGCTCATATAAAAATTGTT+TGG + chr2_3:53213844-53213863 Msa0298940:intron 25.0%
!!! TCTTTTTTATATCTCCTACT+GGG + chr2_3:53213990-53214009 Msa0298940:intron 25.0%
!! AGCATATTTTCTTACTTCAT+CGG + chr2_3:53214053-53214072 Msa0298940:intron 25.0%
!! CAATATGGACCAATATTTTT+AGG - chr2_3:53214557-53214576 None:intergenic 25.0%
!! ATTGGTCCATATTGTAATTT+TGG + chr2_3:53214563-53214582 Msa0298940:three_prime_UTR 25.0%
! TTTGCACCAAAATTACAATA+TGG - chr2_3:53214572-53214591 None:intergenic 25.0%
! ATAAGAATACAAACTACTTG+AGG - chr2_3:53214622-53214641 None:intergenic 25.0%
TAAGCTATAAGCTCAAAATC+TGG - chr2_3:53207512-53207531 None:intergenic 30.0%
!! TATAGTGGATGAACTTATAG+CGG - chr2_3:53207752-53207771 None:intergenic 30.0%
! GTTGATAAGCTAACTTATAG+TGG - chr2_3:53207767-53207786 None:intergenic 30.0%
ATATTTACAAGCTAGTTCAG+CGG - chr2_3:53207851-53207870 None:intergenic 30.0%
TAAGATAGCAAGGATAAAAC+TGG + chr2_3:53207918-53207937 Msa0298940:intron 30.0%
AAGATAGCAAGGATAAAACT+GGG + chr2_3:53207919-53207938 Msa0298940:intron 30.0%
AAGGATAAAACTGGGAAAAA+TGG + chr2_3:53207927-53207946 Msa0298940:intron 30.0%
AATAAAACATAGGATCGGTT+TGG - chr2_3:53208087-53208106 None:intergenic 30.0%
CATCTTATGCAACTATATGA+AGG - chr2_3:53208240-53208259 None:intergenic 30.0%
TCCACCTTATTATAGTTACA+TGG + chr2_3:53208347-53208366 Msa0298940:CDS 30.0%
TCCATGTAACTATAATAAGG+TGG - chr2_3:53208351-53208370 None:intergenic 30.0%
GAGTCCATGTAACTATAATA+AGG - chr2_3:53208354-53208373 None:intergenic 30.0%
AGACTGATAAACAACATAGT+CGG - chr2_3:53208670-53208689 None:intergenic 30.0%
TCAATCATAAAGCACAAAAC+CGG - chr2_3:53208964-53208983 None:intergenic 30.0%
TAAAGAAAGGACTTATGAAC+TGG - chr2_3:53209051-53209070 None:intergenic 30.0%
ACTATCAACAATGTGAGAAA+AGG - chr2_3:53209101-53209120 None:intergenic 30.0%
TATAGAGAAATTCAGACACA+AGG - chr2_3:53209135-53209154 None:intergenic 30.0%
ACCTTTCTTCCTTATAAAGA+TGG - chr2_3:53209260-53209279 None:intergenic 30.0%
TATGTTGTGAGCATAAAAGT+CGG - chr2_3:53209287-53209306 None:intergenic 30.0%
AAGAAACTCAATAGAAAGGT+TGG + chr2_3:53209389-53209408 Msa0298940:intron 30.0%
! TGAAAATTTCCGATTTTTGC+AGG + chr2_3:53209592-53209611 Msa0298940:intron 30.0%
AATTGCGTACTATTCAGAAT+GGG + chr2_3:53209653-53209672 Msa0298940:CDS 30.0%
! ATCCTTTCATCTTCCTTTTT+AGG + chr2_3:53209946-53209965 Msa0298940:intron 30.0%
ATCCTAAAAAGGAAGATGAA+AGG - chr2_3:53209951-53209970 None:intergenic 30.0%
ATGGTCATAGAATCCTAAAA+AGG - chr2_3:53209962-53209981 None:intergenic 30.0%
CAATGCTAAATACAGTTGAA+TGG - chr2_3:53209981-53210000 None:intergenic 30.0%
AAGTTTAAGCAGTTAGAGAA+GGG + chr2_3:53210033-53210052 Msa0298940:intron 30.0%
TAGTAGACTTTCATGTGTAT+AGG - chr2_3:53210091-53210110 None:intergenic 30.0%
TATACACATGAAAGTCTACT+AGG + chr2_3:53210090-53210109 Msa0298940:intron 30.0%
TGACTATCAACTAAGCAATA+GGG - chr2_3:53210130-53210149 None:intergenic 30.0%
TTGACTATCAACTAAGCAAT+AGG - chr2_3:53210131-53210150 None:intergenic 30.0%
!! TAGTTGATAGTCAACTTGAT+AGG + chr2_3:53210137-53210156 Msa0298940:intron 30.0%
!! AGTTGATAGTCAACTTGATA+GGG + chr2_3:53210138-53210157 Msa0298940:intron 30.0%
AACCACTTAAATACTCCATT+GGG - chr2_3:53210182-53210201 None:intergenic 30.0%
AAACCACTTAAATACTCCAT+TGG - chr2_3:53210183-53210202 None:intergenic 30.0%
TTAGCAATTGCAATTAGAAC+TGG + chr2_3:53210259-53210278 Msa0298940:intron 30.0%
TTAGGGACTTGGATATTATA+GGG + chr2_3:53210393-53210412 Msa0298940:intron 30.0%
!!! CCCTTGATAGTTAGTTTTTA+AGG + chr2_3:53210476-53210495 Msa0298940:intron 30.0%
CCCTTAAAAACTAACTATCA+AGG - chr2_3:53210480-53210499 None:intergenic 30.0%
!!! TGATAGTTAGTTTTTAAGGG+TGG + chr2_3:53210480-53210499 Msa0298940:intron 30.0%
!!! GATAGTTAGTTTTTAAGGGT+GGG + chr2_3:53210481-53210500 Msa0298940:intron 30.0%
AGTATTACTGTGCTCTTATT+AGG + chr2_3:53210606-53210625 Msa0298940:intron 30.0%
! TCTCTGAAAAAAAAGGCATA+TGG - chr2_3:53210709-53210728 None:intergenic 30.0%
! ATATTTTCCAGGACAAAACT+CGG - chr2_3:53210788-53210807 None:intergenic 30.0%
!! TGTTTCTGCATATATTTTCC+AGG - chr2_3:53210799-53210818 None:intergenic 30.0%
GTTGTCCTGTTAATATTAAC+AGG + chr2_3:53210837-53210856 Msa0298940:intron 30.0%
GTTGTCCTGTTAATATTAAC+AGG - chr2_3:53210837-53210856 None:intergenic 30.0%
ATATTATCCAGGACAAAACT+CGG - chr2_3:53210910-53210929 None:intergenic 30.0%
GGTTTAAGAAAGATACTTAG+AGG - chr2_3:53211044-53211063 None:intergenic 30.0%
TCTTGAATATAGTTCACAGT+TGG - chr2_3:53211218-53211237 None:intergenic 30.0%
AAAATAACCTCCTTCAGAAA+AGG - chr2_3:53211302-53211321 None:intergenic 30.0%
CTGAAAATTTCGATTGCTAA+AGG + chr2_3:53211363-53211382 Msa0298940:intron 30.0%
!! CTAACTTATATTTTGGACAG+AGG - chr2_3:53211761-53211780 None:intergenic 30.0%
TCCAAAATATAAGTTAGCTG+TGG + chr2_3:53211764-53211783 Msa0298940:intron 30.0%
! ACCACAGCTAACTTATATTT+TGG - chr2_3:53211768-53211787 None:intergenic 30.0%
TCTTTACTTATAAAGCAACG+AGG - chr2_3:53211924-53211943 None:intergenic 30.0%
TTGTTACACTTACATCGATA+AGG + chr2_3:53212007-53212026 Msa0298940:intron 30.0%
AAAACATATCATGTGCTCTT+GGG - chr2_3:53212038-53212057 None:intergenic 30.0%
TTTCCATGCTGATCATATAA+TGG - chr2_3:53212194-53212213 None:intergenic 30.0%
AGCATGGAAAAATCATTTCA+AGG + chr2_3:53212204-53212223 Msa0298940:intron 30.0%
GCATGGAAAAATCATTTCAA+GGG + chr2_3:53212205-53212224 Msa0298940:intron 30.0%
!! CAAATAGATGACTTGTTTGT+TGG + chr2_3:53212348-53212367 Msa0298940:intron 30.0%
! ATCTATTGTTGAGCTTTGTA+TGG + chr2_3:53212393-53212412 Msa0298940:intron 30.0%
!!! AATGGTGAAGAAGCATTTTA+AGG + chr2_3:53212645-53212664 Msa0298940:intron 30.0%
!! CGATTTGTTAGAACTTAGAA+CGG - chr2_3:53212802-53212821 None:intergenic 30.0%
AGAACACTATTATGAAGTTC+AGG - chr2_3:53213169-53213188 None:intergenic 30.0%
!! CAAAATCAACCATTTTGGAA+TGG - chr2_3:53213358-53213377 None:intergenic 30.0%
CATTTCTTACTTTATTGACC+AGG + chr2_3:53213395-53213414 Msa0298940:intron 30.0%
TGAGCTCATATAAGTTATGA+AGG + chr2_3:53213645-53213664 Msa0298940:intron 30.0%
!!! AGTATTTGTTTTGTCCATCT+AGG + chr2_3:53213707-53213726 Msa0298940:intron 30.0%
!!! GTCTTTTTTATATCTCCTAC+TGG + chr2_3:53213989-53214008 Msa0298940:intron 30.0%
ATTCTTCTTCAAAATCCAAG+AGG - chr2_3:53214180-53214199 None:intergenic 30.0%
! TGTTGTCAAGAAGTACATAA+GGG - chr2_3:53214434-53214453 None:intergenic 30.0%
! TTGTTGTCAAGAAGTACATA+AGG - chr2_3:53214435-53214454 None:intergenic 30.0%
AAGTACATGAAGTCCTAAAA+TGG - chr2_3:53214651-53214670 None:intergenic 30.0%
TTGTAAGTTGTAAACTCTCT+TGG + chr2_3:53214669-53214688 Msa0298940:three_prime_UTR 30.0%
GGCTTGAATTGAAGACATAA+CGG - chr2_3:53207222-53207241 None:intergenic 35.0%
AAATGGTTGAAGGACAAGTT+GGG - chr2_3:53207254-53207273 None:intergenic 35.0%
AAAATGGTTGAAGGACAAGT+TGG - chr2_3:53207255-53207274 None:intergenic 35.0%
! TGAAGTTTGGAACCTGAAAA+TGG - chr2_3:53207271-53207290 None:intergenic 35.0%
ATAAGCTCAAAATCTGGCAT+TGG - chr2_3:53207506-53207525 None:intergenic 35.0%
! GCTGAACTAGCTTGTAAATA+TGG + chr2_3:53207850-53207869 Msa0298940:intron 35.0%
ACTATAACCTCGTGAGAAAA+TGG + chr2_3:53207987-53208006 Msa0298940:intron 35.0%
CAAGTATGTTGATGTCTACA+TGG - chr2_3:53208160-53208179 None:intergenic 35.0%
CATGTAGACATCAACATACT+TGG + chr2_3:53208158-53208177 Msa0298940:intron 35.0%
TAGACATCAACATACTTGGT+GGG + chr2_3:53208162-53208181 Msa0298940:intron 35.0%
GGCAATTTACAAAGTAGAGT+TGG + chr2_3:53208189-53208208 Msa0298940:CDS 35.0%
GTATTCCTGAAGTTGAGTAT+TGG + chr2_3:53208415-53208434 Msa0298940:CDS 35.0%
GAGGAAGAGTTATAGAACTT+CGG + chr2_3:53208536-53208555 Msa0298940:CDS 35.0%
AGTTATAGAACTTCGGTTTC+TGG + chr2_3:53208543-53208562 Msa0298940:CDS 35.0%
AACTCCTCAAAATCTTCTTG+GGG - chr2_3:53208642-53208661 None:intergenic 35.0%
GAACTCCTCAAAATCTTCTT+GGG - chr2_3:53208643-53208662 None:intergenic 35.0%
TGAACTCCTCAAAATCTTCT+TGG - chr2_3:53208644-53208663 None:intergenic 35.0%
TTCGGATCAATAAATGGATG+AGG - chr2_3:53208744-53208763 None:intergenic 35.0%
GCATTATTTAAATGGTCGTG+TGG + chr2_3:53209025-53209044 Msa0298940:intron 35.0%
! AAAGGCTTTGATTGTCGATA+TGG - chr2_3:53209083-53209102 None:intergenic 35.0%
GCCATCTTTATAAGGAAGAA+AGG + chr2_3:53209256-53209275 Msa0298940:CDS 35.0%
AAGTTTACCACAATATGCCA+TGG + chr2_3:53209521-53209540 Msa0298940:intron 35.0%
AGTTTACCACAATATGCCAT+GGG + chr2_3:53209522-53209541 Msa0298940:intron 35.0%
CATTCTGAATAGTACGCAAT+TGG - chr2_3:53209654-53209673 None:intergenic 35.0%
CAATTGCGTACTATTCAGAA+TGG + chr2_3:53209652-53209671 Msa0298940:CDS 35.0%
GTACTATTCAGAATGGGTAA+AGG + chr2_3:53209659-53209678 Msa0298940:CDS 35.0%
TGCTTAAACTTCTAGGTGTA+GGG - chr2_3:53210024-53210043 None:intergenic 35.0%
CTCTAACTGCTTAAACTTCT+AGG - chr2_3:53210031-53210050 None:intergenic 35.0%
GAAGTTTAAGCAGTTAGAGA+AGG + chr2_3:53210032-53210051 Msa0298940:intron 35.0%
TTAAAAGCTAGCTACCAAAG+GGG - chr2_3:53210213-53210232 None:intergenic 35.0%
CTTAAAAGCTAGCTACCAAA+GGG - chr2_3:53210214-53210233 None:intergenic 35.0%
!!! CTTTGGTAGCTAGCTTTTAA+GGG + chr2_3:53210213-53210232 Msa0298940:intron 35.0%
!!! TTTGGTAGCTAGCTTTTAAG+GGG + chr2_3:53210214-53210233 Msa0298940:intron 35.0%
TTGCAATTAGAACTGGTTGT+TGG + chr2_3:53210266-53210285 Msa0298940:intron 35.0%
GTTAGGGACTTGGATATTAT+AGG + chr2_3:53210392-53210411 Msa0298940:intron 35.0%
ACTGAGCATATTACTAGATG+GGG - chr2_3:53210429-53210448 None:intergenic 35.0%
CACTGAGCATATTACTAGAT+GGG - chr2_3:53210430-53210449 None:intergenic 35.0%
GTGATAAGTATCTAAGCACA+TGG - chr2_3:53210511-53210530 None:intergenic 35.0%
TGGAAACCTTAATATTGTCC+TGG + chr2_3:53210756-53210775 Msa0298940:intron 35.0%
CCATTTCCAGGACAATATTA+AGG - chr2_3:53210765-53210784 None:intergenic 35.0%
CCTTAATATTGTCCTGGAAA+TGG + chr2_3:53210762-53210781 Msa0298940:intron 35.0%
!! AATGTTAGTCTGAGTTTTCC+AGG - chr2_3:53210985-53211004 None:intergenic 35.0%
TAGTTCACAGTTGGATAAAC+TGG - chr2_3:53211209-53211228 None:intergenic 35.0%
TTCAGAAAAGGCAGCATATT+TGG - chr2_3:53211290-53211309 None:intergenic 35.0%
! AAATATGCTGCCTTTTCTGA+AGG + chr2_3:53211289-53211308 Msa0298940:CDS 35.0%
TATGGAACATATCTTCAGGA+TGG + chr2_3:53211425-53211444 Msa0298940:intron 35.0%
TGCATAAGCATTTGTCACAT+AGG - chr2_3:53211675-53211694 None:intergenic 35.0%
ATACCTAAGAAGCTAGAACA+AGG - chr2_3:53211847-53211866 None:intergenic 35.0%
GAAAACATATCATGTGCTCT+TGG - chr2_3:53212039-53212058 None:intergenic 35.0%
TTGCCATTATATGATCAGCA+TGG + chr2_3:53212188-53212207 Msa0298940:intron 35.0%
TGGAAAAATCATTTCAAGGG+AGG + chr2_3:53212208-53212227 Msa0298940:CDS 35.0%
TGTGTAGTAGAACCAGTAAA+TGG + chr2_3:53212627-53212646 Msa0298940:intron 35.0%
AATGCTTCTTCACCATTTAC+TGG - chr2_3:53212642-53212661 None:intergenic 35.0%
TTAAGGATTGAATGACAGGT+CGG - chr2_3:53213009-53213028 None:intergenic 35.0%
! ACATGATACAGCTTTTGATG+AGG - chr2_3:53213071-53213090 None:intergenic 35.0%
TAGTGATGTTGATGTTGAAG+AGG + chr2_3:53213428-53213447 Msa0298940:CDS 35.0%
! TCTGATTTTATAGTCCCAGT+AGG - chr2_3:53214007-53214026 None:intergenic 35.0%
!! CTGAAGTATACCACTTTTCA+TGG - chr2_3:53214230-53214249 None:intergenic 35.0%
AAGTGGTATACTTCAGAAGT+AGG + chr2_3:53214234-53214253 Msa0298940:three_prime_UTR 35.0%
CGTTATGTTGTAGACTAAAC+AGG + chr2_3:53214263-53214282 Msa0298940:three_prime_UTR 35.0%
ATGTTGTAGACTAAACAGGA+AGG + chr2_3:53214267-53214286 Msa0298940:intron 35.0%
TGTTGTAGACTAAACAGGAA+GGG + chr2_3:53214268-53214287 Msa0298940:intron 35.0%
AAGTTCCAAATGAATGCAGA+GGG - chr2_3:53214467-53214486 None:intergenic 35.0%
TAAGTTCCAAATGAATGCAG+AGG - chr2_3:53214468-53214487 None:intergenic 35.0%
TTAAATGATAAGGGAGGGTG+TGG + chr2_3:53207116-53207135 Msa0298940:five_prime_UTR 40.0%
ACGTTTCAGCTTCTGCAAAA+CGG + chr2_3:53207194-53207213 Msa0298940:five_prime_UTR 40.0%
! CTTGTCCTTCAACCATTTTC+AGG + chr2_3:53207256-53207275 Msa0298940:CDS 40.0%
TGGAACCTGAAAATGGTTGA+AGG - chr2_3:53207264-53207283 None:intergenic 40.0%
!! CAGTTAGTTGATAGCCGATA+AGG + chr2_3:53207790-53207809 Msa0298940:intron 40.0%
! GTAACTACCATTTTCTCACG+AGG - chr2_3:53207997-53208016 None:intergenic 40.0%
GTAGACATCAACATACTTGG+TGG + chr2_3:53208161-53208180 Msa0298940:intron 40.0%
TGTTGAGGGGAATGTTGAAT+TGG + chr2_3:53208584-53208603 Msa0298940:CDS 40.0%
AATGTTGAATTGGATGACCC+TGG + chr2_3:53208594-53208613 Msa0298940:CDS 40.0%
! TGAACCCCAAGAAGATTTTG+AGG + chr2_3:53208635-53208654 Msa0298940:CDS 40.0%
CTCGTAAGTGTTCCTTCTAT+CGG - chr2_3:53208777-53208796 None:intergenic 40.0%
AGAAAGAACAATGGTCCAGA+TGG + chr2_3:53208829-53208848 Msa0298940:CDS 40.0%
AAACTAACCGTTTCAGTGTC+AGG - chr2_3:53208867-53208886 None:intergenic 40.0%
ACTGGACAAGTGAAGCTTTA+TGG + chr2_3:53209189-53209208 Msa0298940:CDS 40.0%
AGAGCAGTTTCTGTTAACGT+TGG - chr2_3:53209222-53209241 None:intergenic 40.0%
!! TGCCATGGGAACTTGTTATA+AGG + chr2_3:53209536-53209555 Msa0298940:intron 40.0%
CTCCTTATAACAAGTTCCCA+TGG - chr2_3:53209541-53209560 None:intergenic 40.0%
CAAGAGAAACTGGAAAGGAT+TGG + chr2_3:53209627-53209646 Msa0298940:CDS 40.0%
ATTCAGAATGGGTAAAGGCA+TGG + chr2_3:53209664-53209683 Msa0298940:CDS 40.0%
CCATCATTACACGATACTCT+CGG - chr2_3:53209788-53209807 None:intergenic 40.0%
!! CGAGAGTATCGTGTAATGAT+GGG + chr2_3:53209786-53209805 Msa0298940:CDS 40.0%
!! GAGAGTATCGTGTAATGATG+GGG + chr2_3:53209787-53209806 Msa0298940:CDS 40.0%
ATCCTTTGGCAATGAGAATG+AGG + chr2_3:53209832-53209851 Msa0298940:CDS 40.0%
TCCTTTGGCAATGAGAATGA+GGG + chr2_3:53209833-53209852 Msa0298940:CDS 40.0%
CTGCTTAAACTTCTAGGTGT+AGG - chr2_3:53210025-53210044 None:intergenic 40.0%
TAGTCAACTTGATAGGGACT+TGG + chr2_3:53210144-53210163 Msa0298940:intron 40.0%
AGTCAACTTGATAGGGACTT+GGG + chr2_3:53210145-53210164 Msa0298940:intron 40.0%
TGATAGGGACTTGGGTATTA+TGG + chr2_3:53210153-53210172 Msa0298940:intron 40.0%
GATAGGGACTTGGGTATTAT+GGG + chr2_3:53210154-53210173 Msa0298940:intron 40.0%
! TGCCCAATGGAGTATTTAAG+TGG + chr2_3:53210177-53210196 Msa0298940:intron 40.0%
CCTTAAAAGCTAGCTACCAA+AGG - chr2_3:53210215-53210234 None:intergenic 40.0%
!!! CCTTTGGTAGCTAGCTTTTA+AGG + chr2_3:53210212-53210231 Msa0298940:intron 40.0%
!!! TTGGTAGCTAGCTTTTAAGG+GGG + chr2_3:53210215-53210234 Msa0298940:intron 40.0%
CAATTAGAACTGGTTGTTGG+TGG + chr2_3:53210269-53210288 Msa0298940:intron 40.0%
TCAATGGCAGTGCTATGTTA+GGG + chr2_3:53210376-53210395 Msa0298940:intron 40.0%
TATTACTAGATGGGGGACTT+GGG - chr2_3:53210421-53210440 None:intergenic 40.0%
ATATTACTAGATGGGGGACT+TGG - chr2_3:53210422-53210441 None:intergenic 40.0%
CTGAGCATATTACTAGATGG+GGG - chr2_3:53210428-53210447 None:intergenic 40.0%
CCACTGAGCATATTACTAGA+TGG - chr2_3:53210431-53210450 None:intergenic 40.0%
CCATCTAGTAATATGCTCAG+TGG + chr2_3:53210428-53210447 Msa0298940:intron 40.0%
! AGTGGAGTACTTAAGTTTCC+TGG + chr2_3:53210446-53210465 Msa0298940:intron 40.0%
TTTCCCTTCTTTCTGCAGTA+TGG + chr2_3:53211174-53211193 Msa0298940:intron 40.0%
TTCCCTTCTTTCTGCAGTAT+GGG + chr2_3:53211175-53211194 Msa0298940:intron 40.0%
ATGAAGTGATTGACTACCGA+GGG + chr2_3:53211243-53211262 Msa0298940:CDS 40.0%
!! AAAGGCAGCATATTTGGTGT+TGG - chr2_3:53211284-53211303 None:intergenic 40.0%
TCACTCTATGATTGATGTGC+TGG + chr2_3:53211478-53211497 Msa0298940:intron 40.0%
TGTGCTGGAATATCAAGCAT+AGG + chr2_3:53211493-53211512 Msa0298940:intron 40.0%
CTGGAATATCAAGCATAGGT+CGG + chr2_3:53211497-53211516 Msa0298940:intron 40.0%
ATATCAAGCATAGGTCGGTT+TGG + chr2_3:53211502-53211521 Msa0298940:intron 40.0%
!! TTGAGCTTATCTACTGGCTT+AGG + chr2_3:53211535-53211554 Msa0298940:intron 40.0%
!! GTTCCTTGTTCTAGCTTCTT+AGG + chr2_3:53211841-53211860 Msa0298940:intron 40.0%
GGAGGAGCTAGAAAAAATTC+TGG + chr2_3:53212226-53212245 Msa0298940:CDS 40.0%
GCAAAAGACTGAACAAGTTG+AGG + chr2_3:53212253-53212272 Msa0298940:CDS 40.0%
! AGACTGAACAAGTTGAGGTA+AGG + chr2_3:53212258-53212277 Msa0298940:intron 40.0%
!! GCACATTCTGGAATTCATTG+AGG - chr2_3:53212869-53212888 None:intergenic 40.0%
! AATTCCAGAATGTGCTGACA+CGG + chr2_3:53212874-53212893 Msa0298940:intron 40.0%
ATGGTCACATGTCTATACTG+TGG - chr2_3:53213042-53213061 None:intergenic 40.0%
! GCTTTTGATGAGGTCGAAAA+TGG - chr2_3:53213061-53213080 None:intergenic 40.0%
ATGGCTAAAGCAGTCGATAT+TGG + chr2_3:53213247-53213266 Msa0298940:CDS 40.0%
CTTTATTGACCAGGATGAAG+AGG + chr2_3:53213404-53213423 Msa0298940:intron 40.0%
GTTGATGTTGAAGAGGTAGT+AGG + chr2_3:53213435-53213454 Msa0298940:CDS 40.0%
!! TACCTTTGATTTGCGAAGCT+GGG - chr2_3:53213556-53213575 None:intergenic 40.0%
!! ATACCTTTGATTTGCGAAGC+TGG - chr2_3:53213557-53213576 None:intergenic 40.0%
TTTGAACGCTTAACCCAGTT+TGG - chr2_3:53213947-53213966 None:intergenic 40.0%
GTTAAGCGTTCAAATCATGC+TGG + chr2_3:53213953-53213972 Msa0298940:intron 40.0%
!! AAATCATGCTGGCTTGACTA+TGG + chr2_3:53213964-53213983 Msa0298940:intron 40.0%
!! TTTGGCTGCATGTTTTGGAT+AGG - chr2_3:53214091-53214110 None:intergenic 40.0%
!!! TTGGTTTTGGCTGCATGTTT+TGG - chr2_3:53214096-53214115 None:intergenic 40.0%
CAGCCAAAACCAAAGAAAGA+GGG + chr2_3:53214103-53214122 Msa0298940:intron 40.0%
AATCCAAGAGGAAATCAGTG+AGG - chr2_3:53214168-53214187 None:intergenic 40.0%
AGACTAAACAGGAAGGGAAA+AGG + chr2_3:53214274-53214293 Msa0298940:intron 40.0%
TCAGTGGCAATAACTCAAGT+GGG - chr2_3:53214385-53214404 None:intergenic 40.0%
TTCAGTGGCAATAACTCAAG+TGG - chr2_3:53214386-53214405 None:intergenic 40.0%
TACATAAGGGACTGTTTCAG+TGG - chr2_3:53214421-53214440 None:intergenic 40.0%
AGTTCCAAATGAATGCAGAG+GGG - chr2_3:53214466-53214485 None:intergenic 40.0%
! GGACAAGTTGGGTAGAAGAT+TGG - chr2_3:53207243-53207262 None:intergenic 45.0%
! TCAACATACTTGGTGGGTGT+TGG + chr2_3:53208168-53208187 Msa0298940:CDS 45.0%
TCAGGCCAATACTCAACTTC+AGG - chr2_3:53208423-53208442 None:intergenic 45.0%
!! GAAGTTGAGTATTGGCCTGA+AGG + chr2_3:53208423-53208442 Msa0298940:CDS 45.0%
ACTTGCTCAACAGTTCCTTC+AGG - chr2_3:53208441-53208460 None:intergenic 45.0%
AAGGAACTGTTGAGCAAGTC+AGG + chr2_3:53208442-53208461 Msa0298940:CDS 45.0%
AGGAACTGTTGAGCAAGTCA+GGG + chr2_3:53208443-53208462 Msa0298940:CDS 45.0%
GAACCTAACGATTCTCCCAT+CGG - chr2_3:53208486-53208505 None:intergenic 45.0%
TCGTTAGGTTCTCCGTCATA+TGG + chr2_3:53208495-53208514 Msa0298940:CDS 45.0%
CCAGGGTTACTACCATATGA+CGG - chr2_3:53208510-53208529 None:intergenic 45.0%
ATGGTAGTAACCCTGGTAGT+AGG + chr2_3:53208514-53208533 Msa0298940:CDS 45.0%
AACTCTTCCTCCTACTACCA+GGG - chr2_3:53208527-53208546 None:intergenic 45.0%
TAACTCTTCCTCCTACTACC+AGG - chr2_3:53208528-53208547 None:intergenic 45.0%
ATTCCCCTCAACATTACCCT+CGG - chr2_3:53208577-53208596 None:intergenic 45.0%
CCAAAACCTCAGGAAAACCA+GGG - chr2_3:53208614-53208633 None:intergenic 45.0%
ACCAAAACCTCAGGAAAACC+AGG - chr2_3:53208615-53208634 None:intergenic 45.0%
TGTTTATCAGTCTGAGCCTG+AGG + chr2_3:53208677-53208696 Msa0298940:CDS 45.0%
TACTCAGTCTCTTCTTCCTC+AGG - chr2_3:53208696-53208715 None:intergenic 45.0%
AGAAGGAACACTTACGAGTG+AGG + chr2_3:53208779-53208798 Msa0298940:CDS 45.0%
GAAAGCCGGAGAAAGAACAA+TGG + chr2_3:53208820-53208839 Msa0298940:CDS 45.0%
CTGGACCATTGTTCTTTCTC+CGG - chr2_3:53208828-53208847 None:intergenic 45.0%
AACAATGGTCCAGATGGCAA+AGG + chr2_3:53208835-53208854 Msa0298940:CDS 45.0%
GAGAAGACCTGACACTGAAA+CGG + chr2_3:53208857-53208876 Msa0298940:CDS 45.0%
GTGTCTGTGTATGCATTTGC+CGG + chr2_3:53208942-53208961 Msa0298940:intron 45.0%
! TCAGGTTTTCCTGAAAGCCA+TGG + chr2_3:53209161-53209180 Msa0298940:intron 45.0%
TTCCTTATAAAGATGGCGCC+TGG - chr2_3:53209253-53209272 None:intergenic 45.0%
CAAGTTCCCATGGCATATTG+TGG - chr2_3:53209531-53209550 None:intergenic 45.0%
! TTCCGATTTTTGCAGGCTTG+AGG + chr2_3:53209599-53209618 Msa0298940:intron 45.0%
AGCCTCAAGCCTGCAAAAAT+CGG - chr2_3:53209604-53209623 None:intergenic 45.0%
CTGAGCAAGAGAAACTGGAA+AGG + chr2_3:53209622-53209641 Msa0298940:CDS 45.0%
ATACTCTCGGTCAGTTTGGT+GGG - chr2_3:53209775-53209794 None:intergenic 45.0%
!! CCGAGAGTATCGTGTAATGA+TGG + chr2_3:53209785-53209804 Msa0298940:CDS 45.0%
TCATTGCCAAAGGATCCCTT+CGG - chr2_3:53209827-53209846 None:intergenic 45.0%
TCCCTCATTCTCATTGCCAA+AGG - chr2_3:53209837-53209856 None:intergenic 45.0%
TTTGGCAATGAGAATGAGGG+AGG + chr2_3:53209836-53209855 Msa0298940:CDS 45.0%
TGTAGGGTCAAGAGGTTGTT+TGG - chr2_3:53210008-53210027 None:intergenic 45.0%
GTGGTTTGATTCTTCCCCTT+TGG + chr2_3:53210196-53210215 Msa0298940:intron 45.0%
!!! TGGTAGCTAGCTTTTAAGGG+GGG + chr2_3:53210216-53210235 Msa0298940:intron 45.0%
GCATTCTACGACGCTTTACT+CGG - chr2_3:53210335-53210354 None:intergenic 45.0%
CTCAATGGCAGTGCTATGTT+AGG + chr2_3:53210375-53210394 Msa0298940:intron 45.0%
!!! TGAAGAGTTTTGGGGCTGAT+TGG + chr2_3:53210878-53210897 Msa0298940:intron 45.0%
!!! GTTTTGGGGCTGATTGGAAA+TGG + chr2_3:53210884-53210903 Msa0298940:intron 45.0%
TCATCAGTGCAAATCGTGAG+TGG - chr2_3:53211065-53211084 None:intergenic 45.0%
TCCCTTCTTTCTGCAGTATG+GGG + chr2_3:53211176-53211195 Msa0298940:intron 45.0%
ACCCCATACTGCAGAAAGAA+GGG - chr2_3:53211180-53211199 None:intergenic 45.0%
CGGTAGTCAATCACTTCATC+TGG - chr2_3:53211242-53211261 None:intergenic 45.0%
GATGAAGTGATTGACTACCG+AGG + chr2_3:53211242-53211261 Msa0298940:CDS 45.0%
TGAAGTGATTGACTACCGAG+GGG + chr2_3:53211244-53211263 Msa0298940:CDS 45.0%
GTTCATGAAAATCTGCCCCT+CGG - chr2_3:53211262-53211281 None:intergenic 45.0%
!! TATGCTGCCTTTTCTGAAGG+AGG + chr2_3:53211292-53211311 Msa0298940:CDS 45.0%
CTTTGTATGGTTCACCAGCT+CGG + chr2_3:53212406-53212425 Msa0298940:intron 45.0%
TTTGTATGGTTCACCAGCTC+GGG + chr2_3:53212407-53212426 Msa0298940:intron 45.0%
CGCACACTGAAAATGTGCAA+AGG + chr2_3:53212680-53212699 Msa0298940:intron 45.0%
GAACGGTAAGTCGCTATATG+AGG - chr2_3:53212785-53212804 None:intergenic 45.0%
GACAGACATCGATGAAGCTA+TGG + chr2_3:53213228-53213247 Msa0298940:CDS 45.0%
TGGCGAGTTCCATTCCAAAA+TGG + chr2_3:53213346-53213365 Msa0298940:intron 45.0%
CATCACTATCCTCTTCATCC+TGG - chr2_3:53213416-53213435 None:intergenic 45.0%
TGTTGAAGAGGTAGTAGGAG+AGG + chr2_3:53213440-53213459 Msa0298940:CDS 45.0%
!! ACCTTTGATTTGCGAAGCTG+GGG - chr2_3:53213555-53213574 None:intergenic 45.0%
GCAGCCAAAACCAAAGAAAG+AGG + chr2_3:53214102-53214121 Msa0298940:intron 45.0%
!! GGACCCTCTTTCTTTGGTTT+TGG - chr2_3:53214109-53214128 None:intergenic 45.0%
GTCATAGGACCCTCTTTCTT+TGG - chr2_3:53214115-53214134 None:intergenic 45.0%
!! GAACCTCACTGATTTCCTCT+TGG + chr2_3:53214162-53214181 Msa0298940:CDS 45.0%
AGCGCATGTTCCATGAAAAG+TGG + chr2_3:53214217-53214236 Msa0298940:three_prime_UTR 45.0%
GATACCCCTCTGCATTCATT+TGG + chr2_3:53214459-53214478 Msa0298940:three_prime_UTR 45.0%
GAGTTGAGTGAGCTTCTCTC+CGG + chr2_3:53207168-53207187 Msa0298940:five_prime_UTR 50.0%
AGTTACATGGACTCCACCTC+TGG + chr2_3:53208360-53208379 Msa0298940:CDS 50.0%
AATACTTGCTCTAGCACCCG+AGG - chr2_3:53208400-53208419 None:intergenic 50.0%
AACGATTCTCCCATCGGAGT+AGG - chr2_3:53208480-53208499 None:intergenic 50.0%
ACTCCGATGGGAGAATCGTT+AGG + chr2_3:53208480-53208499 Msa0298940:CDS 50.0%
CCGTCATATGGTAGTAACCC+TGG + chr2_3:53208507-53208526 Msa0298940:CDS 50.0%
GTAGTAACCCTGGTAGTAGG+AGG + chr2_3:53208517-53208536 Msa0298940:CDS 50.0%
!! GTTTCTGGTTCTTCCTCCGA+GGG + chr2_3:53208558-53208577 Msa0298940:CDS 50.0%
TTCCTCCGAGGGTAATGTTG+AGG + chr2_3:53208569-53208588 Msa0298940:CDS 50.0%
TCCTCCGAGGGTAATGTTGA+GGG + chr2_3:53208570-53208589 Msa0298940:CDS 50.0%
!! CCCTGGTTTTCCTGAGGTTT+TGG + chr2_3:53208611-53208630 Msa0298940:CDS 50.0%
TGGGGTTCAACCAAAACCTC+AGG - chr2_3:53208624-53208643 None:intergenic 50.0%
CACTTACGAGTGAGGAACTG+TGG + chr2_3:53208787-53208806 Msa0298940:CDS 50.0%
TTACGAGTGAGGAACTGTGG+TGG + chr2_3:53208790-53208809 Msa0298940:CDS 50.0%
! GTGAGGAACTGTGGTGGAAT+TGG + chr2_3:53208796-53208815 Msa0298940:CDS 50.0%
! GTGGTGGAATTGGAGAAAGC+CGG + chr2_3:53208806-53208825 Msa0298940:CDS 50.0%
AGGTCTTCTCCTTTGCCATC+TGG - chr2_3:53208847-53208866 None:intergenic 50.0%
CAGTTTCTGCCATGGCTTTC+AGG - chr2_3:53209173-53209192 None:intergenic 50.0%
CTGAAAGCCATGGCAGAAAC+TGG + chr2_3:53209171-53209190 Msa0298940:CDS 50.0%
CACTTGTCCAGTTTCTGCCA+TGG - chr2_3:53209181-53209200 None:intergenic 50.0%
AAACTGCTCTTTACCGAGCC+AGG + chr2_3:53209232-53209251 Msa0298940:CDS 50.0%
TATAAAGATGGCGCCTGGCT+CGG - chr2_3:53209248-53209267 None:intergenic 50.0%
AGCCAGGCGCCATCTTTATA+AGG + chr2_3:53209248-53209267 Msa0298940:CDS 50.0%
TGAGGCTGAGCAAGAGAAAC+TGG + chr2_3:53209617-53209636 Msa0298940:CDS 50.0%
!! CAGAAGCACTTCGAAGAGAC+TGG + chr2_3:53209714-53209733 Msa0298940:CDS 50.0%
GATACTCTCGGTCAGTTTGG+TGG - chr2_3:53209776-53209795 None:intergenic 50.0%
CACGATACTCTCGGTCAGTT+TGG - chr2_3:53209779-53209798 None:intergenic 50.0%
GACTGATGTTCGCATCCGAA+GGG + chr2_3:53209809-53209828 Msa0298940:CDS 50.0%
CTTCTAGGTGTAGGGTCAAG+AGG - chr2_3:53210016-53210035 None:intergenic 50.0%
TGGGTATTATGGGTGCCCAA+TGG + chr2_3:53210164-53210183 Msa0298940:intron 50.0%
!! AGAACTGGTTGTTGGTGGCT+CGG + chr2_3:53210274-53210293 Msa0298940:intron 50.0%
AATGCCAGTCGCTGAGATGT+CGG + chr2_3:53210350-53210369 Msa0298940:intron 50.0%
GCAGTGCTATGTTAGGGACT+TGG + chr2_3:53210382-53210401 Msa0298940:intron 50.0%
ACTATCAAGGGGGAAGAACC+AGG - chr2_3:53210467-53210486 None:intergenic 50.0%
GACAAAACTCGGCCATTTCC+AGG - chr2_3:53210777-53210796 None:intergenic 50.0%
!! GAAATGGCCGAGTTTTGTCC+TGG + chr2_3:53210778-53210797 Msa0298940:intron 50.0%
!! GAAATGGCCGAGTTTTGTCC+TGG + chr2_3:53210778-53210797 Msa0298940:intron 50.0%
CACCCCATACTGCAGAAAGA+AGG - chr2_3:53211181-53211200 None:intergenic 50.0%
CTTCTTTCTGCAGTATGGGG+TGG + chr2_3:53211179-53211198 Msa0298940:intron 50.0%
TCGGACTGCTTGAGAGCTTA+TGG + chr2_3:53211564-53211583 Msa0298940:intron 50.0%
CAACTTCGCATGTCGTTGTC+TGG + chr2_3:53213326-53213345 Msa0298940:intron 50.0%
AGAGGTAGTAGGAGAGGAAG+AGG + chr2_3:53213446-53213465 Msa0298940:CDS 50.0%
AGTAGGAGAGGAAGAGGAAG+AGG + chr2_3:53213452-53213471 Msa0298940:CDS 50.0%
AGAGGAAGAGGAAGAGGTAG+AGG + chr2_3:53213458-53213477 Msa0298940:intron 50.0%
AGAGGGAGATGAAGAGGAAG+AGG + chr2_3:53213482-53213501 Msa0298940:intron 50.0%
TCCCCAGCTTCGCAAATCAA+AGG + chr2_3:53213551-53213570 Msa0298940:intron 50.0%
GAAAGAGGGTCCTATGACAC+TGG + chr2_3:53214117-53214136 Msa0298940:CDS 50.0%
ACAGCCTCATCCAGTGTCAT+AGG - chr2_3:53214130-53214149 None:intergenic 50.0%
ATGACACTGGATGAGGCTGT+AGG + chr2_3:53214130-53214149 Msa0298940:CDS 50.0%
TGGCTAAGGGACTGTTTCAG+TGG - chr2_3:53214401-53214420 None:intergenic 50.0%
GGGACTGTTTCAGTGGCTAA+GGG - chr2_3:53214414-53214433 None:intergenic 50.0%
AGGGACTGTTTCAGTGGCTA+AGG - chr2_3:53214415-53214434 None:intergenic 50.0%
GCAGAAGCTGAAACGTCGTC+CGG - chr2_3:53207190-53207209 None:intergenic 55.0%
TTGAGCAAGTCAGGGCTGCT+AGG + chr2_3:53208451-53208470 Msa0298940:CDS 55.0%
TGAGCAAGTCAGGGCTGCTA+GGG + chr2_3:53208452-53208471 Msa0298940:CDS 55.0%
!! GGTTTCTGGTTCTTCCTCCG+AGG + chr2_3:53208557-53208576 Msa0298940:CDS 55.0%
CCTCCGAGGGTAATGTTGAG+GGG + chr2_3:53208571-53208590 Msa0298940:CDS 55.0%
!! GGATGACCCTGGTTTTCCTG+AGG + chr2_3:53208605-53208624 Msa0298940:CDS 55.0%
GGACTGATGTTCGCATCCGA+AGG + chr2_3:53209808-53209827 Msa0298940:CDS 55.0%
TCGCATCCGAAGGGATCCTT+TGG + chr2_3:53209818-53209837 Msa0298940:CDS 55.0%
!! TGGTTGTTGGTGGCTCGGAA+AGG + chr2_3:53210279-53210298 Msa0298940:intron 55.0%
GGCTCGGAAAGGATTACCTG+CGG + chr2_3:53210290-53210309 Msa0298940:intron 55.0%
TCGGAAAGGATTACCTGCGG+AGG + chr2_3:53210293-53210312 Msa0298940:intron 55.0%
CGGAAAGGATTACCTGCGGA+GGG + chr2_3:53210294-53210313 Msa0298940:intron 55.0%
GGAAAGGATTACCTGCGGAG+GGG + chr2_3:53210295-53210314 Msa0298940:intron 55.0%
!! GCTGAGATGTCGGCTCTCAA+TGG + chr2_3:53210360-53210379 Msa0298940:intron 55.0%
!! CTACTGGCTTAGGCACCTGT+CGG + chr2_3:53211545-53211564 Msa0298940:intron 55.0%
AAGCTCTCAAGCAGTCCGAC+AGG - chr2_3:53211563-53211582 None:intergenic 55.0%
TCACTTTCTGACACCCGAGC+TGG - chr2_3:53212423-53212442 None:intergenic 55.0%
TGTGCCGTGTCAGCACATTC+TGG - chr2_3:53212881-53212900 None:intergenic 55.0%
AGAGGAAGAGGTAGAGGCAG+AGG + chr2_3:53213464-53213483 Msa0298940:intron 55.0%
GAGGAAGAGGTAGAGGCAGA+GGG + chr2_3:53213465-53213484 Msa0298940:intron 55.0%
AGAGGCAGAGGGAGATGAAG+AGG + chr2_3:53213476-53213495 Msa0298940:intron 55.0%
GGGTCCTATGACACTGGATG+AGG + chr2_3:53214123-53214142 Msa0298940:CDS 55.0%
CATGGAACATGCGCTTCACG+AGG - chr2_3:53214212-53214231 None:intergenic 55.0%
CACCTCTGGTCAGCTTGAGC+CGG + chr2_3:53208374-53208393 Msa0298940:CDS 60.0%
CCCCTCAACATTACCCTCGG+AGG - chr2_3:53208574-53208593 None:intergenic 60.0%
TTACCTGCGGAGGGGCAGAT+TGG + chr2_3:53210303-53210322 Msa0298940:intron 60.0%
TTTCCAATCTGCCCCTCCGC+AGG - chr2_3:53210309-53210328 None:intergenic 60.0%
GCGGAGGGGCAGATTGGAAA+TGG + chr2_3:53210309-53210328 Msa0298940:intron 60.0%
AGAGCCGACATCTCAGCGAC+TGG - chr2_3:53210357-53210376 None:intergenic 60.0%
GGAACATGCGCTTCACGAGG+AGG - chr2_3:53214209-53214228 None:intergenic 60.0%
CGGCTCAAGCTGACCAGAGG+TGG - chr2_3:53208376-53208395 None:intergenic 65.0%
TGGTCAGCTTGAGCCGGCCT+CGG + chr2_3:53208380-53208399 Msa0298940:CDS 65.0%
CTTGCTCTAGCACCCGAGGC+CGG - chr2_3:53208396-53208415 None:intergenic 65.0%
! TGCTAGGGCGCCTACTCCGA+TGG + chr2_3:53208467-53208486 Msa0298940:CDS 65.0%
! GCTAGGGCGCCTACTCCGAT+GGG + chr2_3:53208468-53208487 Msa0298940:CDS 65.0%
! GGCCGGCTCAAGCTGACCAG+AGG - chr2_3:53208379-53208398 None:intergenic 70.0%
GGTCAGCTTGAGCCGGCCTC+GGG + chr2_3:53208381-53208400 Msa0298940:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 53207086 53214705 53207086 ID=Msa0298940;Name=Msa0298940
chr2_3 mRNA 53207086 53214705 53207086 ID=Msa0298940-mRNA-1;Parent=Msa0298940;Name=Msa0298940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=138|0.90|0.91|1|0.63|0.58|12|430|512
chr2_3 exon 53207086 53207277 53207086 ID=Msa0298940-mRNA-1:exon:17085;Parent=Msa0298940-mRNA-1
chr2_3 exon 53208165 53208878 53208165 ID=Msa0298940-mRNA-1:exon:17086;Parent=Msa0298940-mRNA-1
chr2_3 exon 53209165 53209277 53209165 ID=Msa0298940-mRNA-1:exon:17087;Parent=Msa0298940-mRNA-1
chr2_3 exon 53209614 53209873 53209614 ID=Msa0298940-mRNA-1:exon:17088;Parent=Msa0298940-mRNA-1
chr2_3 exon 53211192 53211313 53211192 ID=Msa0298940-mRNA-1:exon:17089;Parent=Msa0298940-mRNA-1
chr2_3 exon 53212206 53212274 53212206 ID=Msa0298940-mRNA-1:exon:17090;Parent=Msa0298940-mRNA-1
chr2_3 exon 53213226 53213279 53213226 ID=Msa0298940-mRNA-1:exon:17091;Parent=Msa0298940-mRNA-1
chr2_3 exon 53213417 53213473 53213417 ID=Msa0298940-mRNA-1:exon:17092;Parent=Msa0298940-mRNA-1
chr2_3 exon 53214106 53214284 53214106 ID=Msa0298940-mRNA-1:exon:17093;Parent=Msa0298940-mRNA-1
chr2_3 exon 53214308 53214403 53214308 ID=Msa0298940-mRNA-1:exon:17094;Parent=Msa0298940-mRNA-1
chr2_3 exon 53214424 53214502 53214424 ID=Msa0298940-mRNA-1:exon:17095;Parent=Msa0298940-mRNA-1
chr2_3 exon 53214534 53214705 53214534 ID=Msa0298940-mRNA-1:exon:17096;Parent=Msa0298940-mRNA-1
chr2_3 five_prime_UTR 53207086 53207223 53207086 ID=Msa0298940-mRNA-1:five_prime_utr;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53207224 53207277 53207224 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53208165 53208878 53208165 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53209165 53209277 53209165 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53209614 53209873 53209614 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53211192 53211313 53211192 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53212206 53212274 53212206 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53213226 53213279 53213226 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53213417 53213473 53213417 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 CDS 53214106 53214201 53214106 ID=Msa0298940-mRNA-1:cds;Parent=Msa0298940-mRNA-1
chr2_3 three_prime_UTR 53214202 53214284 53214202 ID=Msa0298940-mRNA-1:three_prime_utr;Parent=Msa0298940-mRNA-1
chr2_3 three_prime_UTR 53214308 53214403 53214308 ID=Msa0298940-mRNA-1:three_prime_utr;Parent=Msa0298940-mRNA-1
chr2_3 three_prime_UTR 53214424 53214502 53214424 ID=Msa0298940-mRNA-1:three_prime_utr;Parent=Msa0298940-mRNA-1
chr2_3 three_prime_UTR 53214534 53214705 53214534 ID=Msa0298940-mRNA-1:three_prime_utr;Parent=Msa0298940-mRNA-1
Gene Sequence

>Msa0298940

ATGTCTTCAATTCAAGCCAATCTTCTACCCAACTTGTCCTTCAACCATTTTCAGACATCAACATACTTGGTGGGTGTTGGCAATTTACAAAGTAGAGTTGGTTTCAGAAAATCAAGAAAGAAGTTACCTTCATATAGTTGCATAAGATGTGAAAAGAATGATGAAATAAAGAAAGATGAAGTAAACAAAGATGAAGAAAATAAAGATGAAGTTATTGATTATGTGACAGTTGAACGTCCACCTTATTATAGTTACATGGACTCCACCTCTGGTCAGCTTGAGCCGGCCTCGGGTGCTAGAGCAAGTATTCCTGAAGTTGAGTATTGGCCTGAAGGAACTGTTGAGCAAGTCAGGGCTGCTAGGGCGCCTACTCCGATGGGAGAATCGTTAGGTTCTCCGTCATATGGTAGTAACCCTGGTAGTAGGAGGAAGAGTTATAGAACTTCGGTTTCTGGTTCTTCCTCCGAGGGTAATGTTGAGGGGAATGTTGAATTGGATGACCCTGGTTTTCCTGAGGTTTTGGTTGAACCCCAAGAAGATTTTGAGGAGTTCACGTCCGACTATGTTGTTTATCAGTCTGAGCCTGAGGAAGAAGAGACTGAGTACAAACTTGATAAGAAATTTGGAGCTCCTCATCCATTTATTGATCCGAAAATTAAAAAGCCGATAGAAGGAACACTTACGAGTGAGGAACTGTGGTGGAATTGGAGAAAGCCGGAGAAAGAACAATGGTCCAGATGGCAAAGGAGAAGACCTGACACTGAAACGGTTTTCCTGAAAGCCATGGCAGAAACTGGACAAGTGAAGCTTTATGGTGAAGAGCCAACGTTAACAGAAACTGCTCTTTACCGAGCCAGGCGCCATCTTTATAAGGAAGAAAGGCTTGAGGCTGAGCAAGAGAAACTGGAAAGGATTGGTCCAATTGCGTACTATTCAGAATGGGTAAAGGCATGGAAGAGAGACACATCTCGTGAAGCTATTCAGAAGCACTTCGAAGAGACTGGTGAAGATGAAACCACTCAACTAATTGAAATGTTTTCCCACCAAACTGACCGAGAGTATCGTGTAATGATGGGGACTGATGTTCGCATCCGAAGGGATCCTTTGGCAATGAGAATGAGGGAGGATCAGATAAAGCAAATATGGGGTGGAGATCCAGTTTATCCAACTGTGAACTATATTCAAGATCCAGATGAAGTGATTGACTACCGAGGGGCAGATTTTCATGAACCAACACCAAATATGCTGCCTTTTCTGAAGGAGCATGGAAAAATCATTTCAAGGGAGGAGCTAGAAAAAATTCTGGAAAAGCAAAAGACTGAACAAGTTGAGGTGACAGACATCGATGAAGCTATGGCTAAAGCAGTCGATATTGGTGAAAATGATGATGAAGAGGATAGTGATGTTGATGTTGAAGAGGTAGTAGGAGAGGAAGAGGAAGAGCCAAAACCAAAGAAAGAGGGTCCTATGACACTGGATGAGGCTGTAGGTGATTCTGAGAACCTCACTGATTTCCTCTTGGATTTTGAAGAAGAATGA

Protein sequence

>Msa0298940

MSSIQANLLPNLSFNHFQTSTYLVGVGNLQSRVGFRKSRKKLPSYSCIRCEKNDEIKKDEVNKDEENKDEVIDYVTVERPPYYSYMDSTSGQLEPASGARASIPEVEYWPEGTVEQVRAARAPTPMGESLGSPSYGSNPGSRRKSYRTSVSGSSSEGNVEGNVELDDPGFPEVLVEPQEDFEEFTSDYVVYQSEPEEEETEYKLDKKFGAPHPFIDPKIKKPIEGTLTSEELWWNWRKPEKEQWSRWQRRRPDTETVFLKAMAETGQVKLYGEEPTLTETALYRARRHLYKEERLEAEQEKLERIGPIAYYSEWVKAWKRDTSREAIQKHFEETGEDETTQLIEMFSHQTDREYRVMMGTDVRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGADFHEPTPNMLPFLKEHGKIISREELEKILEKQKTEQVEVTDIDEAMAKAVDIGENDDEEDSDVDVEEVVGEEEEEPKPKKEGPMTLDEAVGDSENLTDFLLDFEEE*