AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 95 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTCATATAGATTTA+AGG 0.126167 3_2:+71286353 Msa0422160:three_prime_UTR
CACATTACTTCCCTTGTTTC+AGG 0.156799 3_2:-71285678 None:intergenic
GGGTCATGTATTACTGTAAT+AGG 0.192711 3_2:+71290336 Msa0422160:three_prime_UTR
AAATAAGTATAATGTTAATT+TGG 0.231223 3_2:+71290256 Msa0422160:three_prime_UTR
TGGTAAGATATATATTTAAT+TGG 0.260492 3_2:+71290149 Msa0422160:three_prime_UTR
CGTGTATTCTCTATACTAAT+TGG 0.265886 3_2:-71284979 None:intergenic
AAAGATGAAGACTGAACTAT+TGG 0.311734 3_2:-71285027 None:intergenic
CTATATGAAATCAAAGTTAT+AGG 0.321947 3_2:-71286345 None:intergenic
TTACAATCAACAAAATAAAA+TGG 0.322451 3_2:-71290372 None:intergenic
AAACTGCTTCACTTCACTAA+TGG 0.340507 3_2:+71285714 Msa0422160:three_prime_UTR
TTGCAGAAGCTGTCTTGGTT+TGG 0.347682 3_2:+71290188 Msa0422160:three_prime_UTR
TTTGATCAACTTAACTTTCT+CGG 0.351595 3_2:-71289652 None:intergenic
GGAGAAGAATACCATTTGTT+AGG 0.365116 3_2:-71289631 None:intergenic
GAAACGGAAGAAGAATTTCT+TGG 0.371083 3_2:+71285988 Msa0422160:three_prime_UTR
TCAAATCCTTAACACTTGTT+TGG 0.371790 3_2:-71290102 None:intergenic
TTTGACAGGTTTGAGTGTAT+TGG 0.406027 3_2:+71286146 Msa0422160:intron
TATCTCATTGGATGCAGCTC+AGG 0.407785 3_2:+71289694 Msa0422160:three_prime_UTR
ACTTGTTTGGTAAAACTTTG+TGG 0.408299 3_2:-71290089 None:intergenic
CACCACACAATTGACCAATC+AGG 0.421193 3_2:+71284937 Msa0422160:five_prime_UTR
GGTCATGTATTACTGTAATA+GGG 0.421742 3_2:+71290337 Msa0422160:three_prime_UTR
AAGAGAGTAGAAGCACCATT+TGG 0.424350 3_2:-71290061 None:intergenic
TTTGGAATGGAAATCTGAAT+TGG 0.432372 3_2:+71290206 Msa0422160:three_prime_UTR
AGAAACACAACCATTCCTTC+TGG 0.435778 3_2:+71285114 Msa0422160:five_prime_UTR
TGTGTAATATAAGTTGCTCT+TGG 0.442101 3_2:+71290315 Msa0422160:three_prime_UTR
ATCATCGTCGGGACCGGCAT+CGG 0.456038 3_2:+71285227 Msa0422160:five_prime_UTR
ATGTCTTGCAGAAGCTGTCT+TGG 0.460844 3_2:+71290183 Msa0422160:three_prime_UTR
CTTGTTTGGTAAAACTTTGT+GGG 0.461470 3_2:-71290088 None:intergenic
GGATGAAGACGGCGAGGATG+TGG 0.464192 3_2:+71285749 Msa0422160:three_prime_UTR
TTTATCTCCATCGGAGTTGA+CGG 0.464855 3_2:-71285306 None:intergenic
ATGAGGAGGGAGGTGGTCGC+CGG 0.466074 3_2:-71285160 None:intergenic
GTGTATTCTCTATACTAATT+GGG 0.470158 3_2:-71284978 None:intergenic
TTATACTTGAGAGTGAGGTT+TGG 0.476020 3_2:-71286203 None:intergenic
AGAAGCACCATTTGGAATGC+TGG 0.476473 3_2:-71290053 None:intergenic
TCTTCTTTCATCACCGCCGC+TGG 0.484557 3_2:+71285281 Msa0422160:five_prime_UTR
TCGGGACCGGCATCGGAGTT+AGG 0.488644 3_2:+71285234 Msa0422160:five_prime_UTR
ACCGTCATCATCGTCGGGAC+CGG 0.492085 3_2:+71285221 Msa0422160:five_prime_UTR
GTGTAATATAAGTTGCTCTT+GGG 0.493169 3_2:+71290316 Msa0422160:three_prime_UTR
AGGAGGGAGGTGGTCGCCGG+TGG 0.496894 3_2:-71285157 None:intergenic
GCCATTAGGTACCTAACAAA+TGG 0.499223 3_2:+71289620 Msa0422160:intron
GACGATGATGACGGTGGCGG+TGG 0.499655 3_2:-71285213 None:intergenic
AAATGTTATACTTGAGAGTG+AGG 0.502907 3_2:-71286208 None:intergenic
TGGAGATAAATTAATGTTGT+CGG 0.510571 3_2:+71285319 Msa0422160:five_prime_UTR
TACTGTAATAGGGTGTCTAA+TGG 0.511348 3_2:+71290347 Msa0422160:three_prime_UTR
GACTGTTCCAGCATTCCAAA+TGG 0.512574 3_2:+71290046 Msa0422160:three_prime_UTR
AAGATGAAGACTGAACTATT+GGG 0.518628 3_2:-71285026 None:intergenic
GAGGATATCTCAAACCTGAT+TGG 0.519181 3_2:-71284951 None:intergenic
CAACATTAATTTATCTCCAT+CGG 0.523467 3_2:-71285315 None:intergenic
ACCGCCACCGTCATCATCGT+CGG 0.526521 3_2:+71285215 Msa0422160:five_prime_UTR
GGTTGAAGAATATGAAGAAA+CGG 0.528087 3_2:+71285972 Msa0422160:three_prime_UTR
GCAGTAAAGAAAAGCATATG+AGG 0.531890 3_2:+71289514 Msa0422160:three_prime_UTR
CCGCCACCGTCATCATCGTC+GGG 0.534818 3_2:+71285216 Msa0422160:five_prime_UTR
CAGTGAATGTTCCGCCGACA+TGG 0.536269 3_2:+71285511 Msa0422160:CDS
TGTACTTTAATCAGCGGCGA+TGG 0.537118 3_2:-71285362 None:intergenic
ATTATGTTTGCAGTGGCTCA+CGG 0.548221 3_2:+71286939 Msa0422160:intron
ATTATGTTTGCAGTGGCTCA+CGG 0.548221 3_2:+71289427 Msa0422160:intron
GCTGGATCCGTCAACTCCGA+TGG 0.548407 3_2:+71285299 Msa0422160:five_prime_UTR
GATCAACGAACCAGAAGGAA+TGG 0.553626 3_2:-71285124 None:intergenic
CAACAGCCTAACTCCGATGC+CGG 0.564596 3_2:-71285240 None:intergenic
GAAGCTGTCTTGGTTTGGAA+TGG 0.567149 3_2:+71290193 Msa0422160:three_prime_UTR
TCGGCGGACATCAGAGAAGA+AGG 0.568449 3_2:+71285475 Msa0422160:CDS
CATACAAATGAGGAGGGAGG+TGG 0.570234 3_2:-71285167 None:intergenic
CCCGACGATGATGACGGTGG+CGG 0.576884 3_2:-71285216 None:intergenic
ACGAAATTCGTCGACGACGG+CGG 0.581665 3_2:+71285426 Msa0422160:five_prime_UTR
TTTACGAAATTCGTCGACGA+CGG 0.585253 3_2:+71285423 Msa0422160:five_prime_UTR
TTTGATTGTACTTTAATCAG+CGG 0.589145 3_2:-71285368 None:intergenic
AGAAAACAGTTGATGATGGT+CGG 0.590020 3_2:+71285456 Msa0422160:exon
AAATGACTGTCATACAAATG+AGG 0.592160 3_2:-71285177 None:intergenic
ATTGAGCAACTCCTGAAACA+AGG 0.592296 3_2:+71285667 Msa0422160:CDS
TTGAGCAACTCCTGAAACAA+GGG 0.592522 3_2:+71285668 Msa0422160:CDS
GACTGTCATACAAATGAGGA+GGG 0.598788 3_2:-71285173 None:intergenic
GTATAGAAAACAGTTGATGA+TGG 0.601792 3_2:+71285452 Msa0422160:exon
TCTATACTAATTGGGAGGAG+AGG 0.605679 3_2:-71284970 None:intergenic
TTGTTTAAATTAGGACTCTG+AGG 0.606909 3_2:+71285951 Msa0422160:intron
CATTGGATGCAGCTCAGGAG+CGG 0.610072 3_2:+71288635 Msa0422160:intron
CATTGGATGCAGCTCAGGAG+CGG 0.610072 3_2:+71289699 Msa0422160:three_prime_UTR
CACTAATGGAGATGAAGTAG+AGG 0.611633 3_2:+71285728 Msa0422160:three_prime_UTR
TGACTGTCATACAAATGAGG+AGG 0.612985 3_2:-71285174 None:intergenic
TAATGAGACTATATAAGAGT+CGG 0.613653 3_2:+71290392 Msa0422160:three_prime_UTR
GCCGGTCCCGACGATGATGA+CGG 0.616076 3_2:-71285222 None:intergenic
AGTTATAGGATATGAATGCA+CGG 0.631860 3_2:-71286331 None:intergenic
CTGAAACAAGGGAAGTAATG+TGG 0.631916 3_2:+71285679 Msa0422160:exon
ATCGGAGTTGACGGATCCAG+CGG 0.632959 3_2:-71285297 None:intergenic
GTGAACAATATAACTCGCGA+TGG 0.655757 3_2:+71286961 Msa0422160:three_prime_UTR
GATGAAGTAGAGGATGAAGA+CGG 0.655937 3_2:+71285738 Msa0422160:three_prime_UTR
CTGATTGGTCAATTGTGTGG+TGG 0.657391 3_2:-71284936 None:intergenic
ATGAAGACTGAACTATTGGG+AGG 0.658700 3_2:-71285023 None:intergenic
TATTCTCTATACTAATTGGG+AGG 0.664675 3_2:-71284975 None:intergenic
AACCTGATTGGTCAATTGTG+TGG 0.669078 3_2:-71284939 None:intergenic
GGAGTTGACGGATCCAGCGG+CGG 0.672445 3_2:-71285294 None:intergenic
GGTGACAATATAACTCGCGA+TGG 0.687358 3_2:+71289448 Msa0422160:three_prime_UTR
AAACAGTTGATGATGGTCGG+CGG 0.701472 3_2:+71285459 Msa0422160:exon
AGTAGAGGATGAAGACGGCG+AGG 0.703240 3_2:+71285743 Msa0422160:three_prime_UTR
TGTCATACAAATGAGGAGGG+AGG 0.710866 3_2:-71285170 None:intergenic
GGTCCCGACGATGATGACGG+TGG 0.722934 3_2:-71285219 None:intergenic
TGACTCTCAAGATTACGATG+AGG 0.745857 3_2:+71285785 Msa0422160:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGACTTTAATTTATTTATT+GGG + chr3_2:71285614-71285633 Msa0422160:intron 10.0%
!! AAATTCAAAACATAAAAAAT+GGG - chr3_2:71286415-71286434 None:intergenic 10.0%
!! AAAATTCAAAACATAAAAAA+TGG - chr3_2:71286416-71286435 None:intergenic 10.0%
!! AAAAAAAATTAAGTTTGAAA+TGG + chr3_2:71286804-71286823 Msa0422160:intron 10.0%
!! TAAAAAAATTAAGTTTGAAA+TGG + chr3_2:71289291-71289310 Msa0422160:intron 10.0%
!! AAATAAGTATAATGTTAATT+TGG + chr3_2:71290256-71290275 Msa0422160:three_prime_UTR 10.0%
!!! TTTTATTTCAAAAAAATAGG+AGG - chr3_2:71285077-71285096 None:intergenic 15.0%
!!! ATTTTCTGTTTTTTTCATAT+GGG - chr3_2:71285395-71285414 None:intergenic 15.0%
!!! TATTTTCTGTTTTTTTCATA+TGG - chr3_2:71285396-71285415 None:intergenic 15.0%
!! CAATAAATAAATTAAAGTCA+TGG - chr3_2:71285615-71285634 None:intergenic 15.0%
!!! CATGACTTTAATTTATTTAT+TGG + chr3_2:71285613-71285632 Msa0422160:intron 15.0%
!! TCAAATCTTGAAATTTATAT+TGG + chr3_2:71286077-71286096 Msa0422160:intron 15.0%
!!! TTTGATTTCATATAGATTTA+AGG + chr3_2:71286353-71286372 Msa0422160:three_prime_UTR 15.0%
!! AATTCAAAACATAAAAAATG+GGG - chr3_2:71286414-71286433 None:intergenic 15.0%
!! CTTAAAAAAAATCATACAAA+AGG - chr3_2:71286652-71286671 None:intergenic 15.0%
!!! CATTTAAAAACATTTTCAAA+GGG - chr3_2:71287080-71287099 None:intergenic 15.0%
!!! TCATTTAAAAACATTTTCAA+AGG - chr3_2:71287081-71287100 None:intergenic 15.0%
!! AATTAGAGAATGATAATATT+AGG - chr3_2:71288490-71288509 None:intergenic 15.0%
!! AATTTGATTAGTAACTAATT+TGG + chr3_2:71288701-71288720 Msa0422160:intron 15.0%
!! AAAATAGCATAAACAAATAT+CGG + chr3_2:71288730-71288749 Msa0422160:intron 15.0%
!! AATTAGAGAATGATAATATT+AGG - chr3_2:71288490-71288509 None:intergenic 15.0%
!! AATTTGATTAGTAACTAATT+TGG + chr3_2:71288701-71288720 Msa0422160:intron 15.0%
!! AAAATAGCATAAACAAATAT+CGG + chr3_2:71288730-71288749 Msa0422160:intron 15.0%
!! TAGATTAAAACAAATAGATA+TGG - chr3_2:71289829-71289848 None:intergenic 15.0%
!! ATTAAAGATTAACAATTCTA+TGG - chr3_2:71289852-71289871 None:intergenic 15.0%
!! TGGTAAGATATATATTTAAT+TGG + chr3_2:71290149-71290168 Msa0422160:three_prime_UTR 15.0%
!!! TATATATTTAATTGGTTTTG+TGG + chr3_2:71290157-71290176 Msa0422160:three_prime_UTR 15.0%
!!! CATTATACTTATTTTAGAAT+TGG - chr3_2:71290250-71290269 None:intergenic 15.0%
!! TTACAATCAACAAAATAAAA+TGG - chr3_2:71290375-71290394 None:intergenic 15.0%
!!! AATTTATATTGGTTGAAATG+AGG + chr3_2:71286088-71286107 Msa0422160:intron 20.0%
!!! ATTTATATTGGTTGAAATGA+GGG + chr3_2:71286089-71286108 Msa0422160:intron 20.0%
!! CTATATGAAATCAAAGTTAT+AGG - chr3_2:71286348-71286367 None:intergenic 20.0%
!!! TTTATTATTGTTTTCAACAG+TGG + chr3_2:71286434-71286453 Msa0422160:intron 20.0%
!! AATTCATTATTGATCAAGAA+AGG + chr3_2:71287318-71287337 Msa0422160:intron 20.0%
!! TTAATAAAGCAAAATCACAA+AGG + chr3_2:71287341-71287360 Msa0422160:intron 20.0%
!!! TTTAATTATTTTAGCACACT+TGG - chr3_2:71287509-71287528 None:intergenic 20.0%
!! TCAAAATAAGATTTGATGTT+TGG - chr3_2:71288035-71288054 None:intergenic 20.0%
!!! AAAGCACGATAAATTTTAAA+GGG + chr3_2:71288414-71288433 Msa0422160:intron 20.0%
!!! TGATTATTCTTTTATCTCAT+TGG + chr3_2:71288618-71288637 Msa0422160:intron 20.0%
!! AAATTTGTCAAAAAAGAGAA+AGG - chr3_2:71288686-71288705 None:intergenic 20.0%
!! TAGATTAAAACAGATAGATA+TGG - chr3_2:71288765-71288784 None:intergenic 20.0%
!! TATACAACAACAGATATAAA+TGG - chr3_2:71288788-71288807 None:intergenic 20.0%
!!! CAATGCTAATTAATATGTTT+TGG + chr3_2:71288847-71288866 Msa0422160:intron 20.0%
!!! TGATTATTCTTTTATCTCAT+TGG + chr3_2:71288618-71288637 Msa0422160:intron 20.0%
!! AAATTTGTCAAAAAAGAGAA+AGG - chr3_2:71288686-71288705 None:intergenic 20.0%
! GTGTATTCTCTATACTAATT+GGG - chr3_2:71284981-71285000 None:intergenic 25.0%
! CAACATTAATTTATCTCCAT+CGG - chr3_2:71285318-71285337 None:intergenic 25.0%
! TGGAGATAAATTAATGTTGT+CGG + chr3_2:71285319-71285338 Msa0422160:five_prime_UTR 25.0%
! TTTGATTGTACTTTAATCAG+CGG - chr3_2:71285371-71285390 None:intergenic 25.0%
! TTTAACAGTTCTTAATCTTG+TGG + chr3_2:71285926-71285945 Msa0422160:intron 25.0%
! TTAACAGTTCTTAATCTTGT+GGG + chr3_2:71285927-71285946 Msa0422160:intron 25.0%
! TTTCTTGGTATGATGTTATA+TGG + chr3_2:71286003-71286022 Msa0422160:intron 25.0%
! TTCTTGGTATGATGTTATAT+GGG + chr3_2:71286004-71286023 Msa0422160:intron 25.0%
!!! TTTTGAAACTATTTGAGTTG+TGG + chr3_2:71286031-71286050 Msa0422160:intron 25.0%
!!! TGATGATTTTGAAATTGACT+TGG + chr3_2:71286501-71286520 Msa0422160:intron 25.0%
!!! AGTGTGATTATTTTGAGATT+GGG + chr3_2:71286536-71286555 Msa0422160:intron 25.0%
! ATTAGTATCCAACAATGATT+TGG + chr3_2:71286620-71286639 Msa0422160:intron 25.0%
! TCTAATATAGGTTCAAAAAG+TGG - chr3_2:71286675-71286694 None:intergenic 25.0%
! GCACATAACTAATCTAATAT+AGG - chr3_2:71286687-71286706 None:intergenic 25.0%
!! GTTTGAAATGGAAAGAATAT+TGG + chr3_2:71286816-71286835 Msa0422160:intron 25.0%
! ACTGTATAACTTGAATTCAT+TGG + chr3_2:71286852-71286871 Msa0422160:intron 25.0%
!! TTTTTCTATTATGTTTGCAG+TGG + chr3_2:71286932-71286951 Msa0422160:intron 25.0%
!! CTCTTGAGTGAATTTTATTA+AGG + chr3_2:71287159-71287178 Msa0422160:intron 25.0%
!! GAGTGAATTTTATTAAGGAT+AGG + chr3_2:71287164-71287183 Msa0422160:intron 25.0%
! TATCTTAAAGAAACAAGACT+TGG + chr3_2:71287480-71287499 Msa0422160:intron 25.0%
!! ACAGTACCAAATCATATTTT+CGG + chr3_2:71287939-71287958 Msa0422160:intron 25.0%
!!! CTTTAAAATTTATCGTGCTT+TGG - chr3_2:71288415-71288434 None:intergenic 25.0%
!! CAAAGCACGATAAATTTTAA+AGG + chr3_2:71288413-71288432 Msa0422160:intron 25.0%
! TTTGATCAACTTAACTTTCT+CGG - chr3_2:71288591-71288610 None:intergenic 25.0%
!!! TTAATATGTTTTGGTTCTGA+TGG + chr3_2:71288856-71288875 Msa0422160:intron 25.0%
! GCACAAAAAAATAATTCCTA+TGG - chr3_2:71288890-71288909 None:intergenic 25.0%
!!! TAGGAATTATTTTTTTGTGC+TGG + chr3_2:71288890-71288909 Msa0422160:intron 25.0%
! AAAAATCTGACACAAATATG+TGG - chr3_2:71288963-71288982 None:intergenic 25.0%
!! TTTTAATATGCAGGTTACTT+TGG - chr3_2:71289032-71289051 None:intergenic 25.0%
!!! ATAAGCAAGTTTTAATATGC+AGG - chr3_2:71289041-71289060 None:intergenic 25.0%
! TAACTTTATCATATTTGCCA+AGG + chr3_2:71289149-71289168 Msa0422160:intron 25.0%
! AGCGTAAATTTCAAACTTAT+CGG - chr3_2:71289195-71289214 None:intergenic 25.0%
!! GTTTGAAATGGAAAGAATAT+TGG + chr3_2:71286816-71286835 Msa0422160:intron 25.0%
! ACTGTATAACATGAATTCAT+TGG + chr3_2:71289339-71289358 Msa0422160:intron 25.0%
!! TTTTTCTATTATGTTTGCAG+TGG + chr3_2:71286932-71286951 Msa0422160:intron 25.0%
! TTTGATCAACTTAACTTTCT+CGG - chr3_2:71288591-71288610 None:intergenic 25.0%
! TTAATGTGTTACAATAATGC+TGG + chr3_2:71289867-71289886 Msa0422160:intron 25.0%
!!! ATGTGTCTATTCCATTTTTA+TGG + chr3_2:71289993-71290012 Msa0422160:intron 25.0%
! TAATGAGACTATATAAGAGT+CGG + chr3_2:71290392-71290411 Msa0422160:three_prime_UTR 25.0%
TATTCTCTATACTAATTGGG+AGG - chr3_2:71284978-71284997 None:intergenic 30.0%
CGTGTATTCTCTATACTAAT+TGG - chr3_2:71284982-71285001 None:intergenic 30.0%
AAGATGAAGACTGAACTATT+GGG - chr3_2:71285029-71285048 None:intergenic 30.0%
AAAGATGAAGACTGAACTAT+TGG - chr3_2:71285030-71285049 None:intergenic 30.0%
TCAAAAAAATAGGAGGAGAT+GGG - chr3_2:71285070-71285089 None:intergenic 30.0%
TTCAAAAAAATAGGAGGAGA+TGG - chr3_2:71285071-71285090 None:intergenic 30.0%
AAATGACTGTCATACAAATG+AGG - chr3_2:71285180-71285199 None:intergenic 30.0%
!! GTATAGAAAACAGTTGATGA+TGG + chr3_2:71285452-71285471 Msa0422160:exon 30.0%
GTGAAAAAATTGAACCATGT+CGG - chr3_2:71285528-71285547 None:intergenic 30.0%
!!! ACATGGTTCAATTTTTTCAC+AGG + chr3_2:71285528-71285547 Msa0422160:CDS 30.0%
!! TATTGGGTGAATTTTAGTGA+TGG + chr3_2:71285630-71285649 Msa0422160:intron 30.0%
! TATATCTCCTTTTGTCTACA+AGG + chr3_2:71285860-71285879 Msa0422160:intron 30.0%
! CTTGTGGGTTTGTTTAAATT+AGG + chr3_2:71285942-71285961 Msa0422160:intron 30.0%
TTGTTTAAATTAGGACTCTG+AGG + chr3_2:71285951-71285970 Msa0422160:intron 30.0%
GGTTGAAGAATATGAAGAAA+CGG + chr3_2:71285972-71285991 Msa0422160:three_prime_UTR 30.0%
AAATGTTATACTTGAGAGTG+AGG - chr3_2:71286211-71286230 None:intergenic 30.0%
TGCACAAAATAGTGAATACA+TGG - chr3_2:71286241-71286260 None:intergenic 30.0%
! AATTATGTCCCATTTTCTTC+TGG + chr3_2:71286288-71286307 Msa0422160:intron 30.0%
CTGAAAAACCAGAAGAAAAT+GGG - chr3_2:71286299-71286318 None:intergenic 30.0%
AGTTATAGGATATGAATGCA+CGG - chr3_2:71286334-71286353 None:intergenic 30.0%
AGTGGTAATAACAACTAGAT+AGG + chr3_2:71286452-71286471 Msa0422160:intron 30.0%
ACAACTAGATAGGATTAACT+TGG + chr3_2:71286462-71286481 Msa0422160:intron 30.0%
!!! GAGTGTGATTATTTTGAGAT+TGG + chr3_2:71286535-71286554 Msa0422160:intron 30.0%
!!! GTGTGATTATTTTGAGATTG+GGG + chr3_2:71286537-71286556 Msa0422160:intron 30.0%
ACATTAACAACAATGCATCT+TGG + chr3_2:71287561-71287580 Msa0422160:intron 30.0%
! TGATGAATTTGCTTGTTTGT+AGG - chr3_2:71287891-71287910 None:intergenic 30.0%
GATGATCCGAAAATATGATT+TGG - chr3_2:71287948-71287967 None:intergenic 30.0%
!! TTGTTTTGCACATTGCAAAA+AGG + chr3_2:71288225-71288244 Msa0422160:intron 30.0%
TGAAGTAAATGTCACTAGAA+GGG - chr3_2:71288454-71288473 None:intergenic 30.0%
TTGAAGTAAATGTCACTAGA+AGG - chr3_2:71288455-71288474 None:intergenic 30.0%
! ACTATTTGTTAGGTACCTAA+TGG - chr3_2:71288560-71288579 None:intergenic 30.0%
GGAGAAGAATACTATTTGTT+AGG - chr3_2:71288570-71288589 None:intergenic 30.0%
CATATAAGTTTGTCTAGTAC+TGG - chr3_2:71289086-71289105 None:intergenic 30.0%
AAATCAGACATCTTACGTAT+TGG - chr3_2:71289126-71289145 None:intergenic 30.0%
AATACGTAAGATGTCTGATT+TGG + chr3_2:71289125-71289144 Msa0422160:intron 30.0%
AACAATAGTTTCTTGATCCT+TGG - chr3_2:71289169-71289188 None:intergenic 30.0%
CTTGTTTGGTAAAACTTTGT+GGG - chr3_2:71290091-71290110 None:intergenic 30.0%
ACTTGTTTGGTAAAACTTTG+TGG - chr3_2:71290092-71290111 None:intergenic 30.0%
! GTTTTACCAAACAAGTGTTA+AGG + chr3_2:71290096-71290115 Msa0422160:three_prime_UTR 30.0%
TCAAATCCTTAACACTTGTT+TGG - chr3_2:71290105-71290124 None:intergenic 30.0%
! TTTGGAATGGAAATCTGAAT+TGG + chr3_2:71290206-71290225 Msa0422160:three_prime_UTR 30.0%
TGTGTAATATAAGTTGCTCT+TGG + chr3_2:71290315-71290334 Msa0422160:three_prime_UTR 30.0%
GTGTAATATAAGTTGCTCTT+GGG + chr3_2:71290316-71290335 Msa0422160:three_prime_UTR 30.0%
GGTCATGTATTACTGTAATA+GGG + chr3_2:71290337-71290356 Msa0422160:three_prime_UTR 30.0%
AAAAAGATCAACGAACCAGA+AGG - chr3_2:71285132-71285151 None:intergenic 35.0%
!! TTGATCTTTTTCACTTCCAC+CGG + chr3_2:71285141-71285160 Msa0422160:five_prime_UTR 35.0%
!! AGAAAACAGTTGATGATGGT+CGG + chr3_2:71285456-71285475 Msa0422160:exon 35.0%
AAAAAATTGAACCATGTCGG+CGG - chr3_2:71285525-71285544 None:intergenic 35.0%
AAACTGCTTCACTTCACTAA+TGG + chr3_2:71285714-71285733 Msa0422160:three_prime_UTR 35.0%
GAAACGGAAGAAGAATTTCT+TGG + chr3_2:71285988-71286007 Msa0422160:three_prime_UTR 35.0%
!! TCATTGGATGTGATTTTGAC+AGG + chr3_2:71286132-71286151 Msa0422160:intron 35.0%
TTTGACAGGTTTGAGTGTAT+TGG + chr3_2:71286146-71286165 Msa0422160:intron 35.0%
TTATACTTGAGAGTGAGGTT+TGG - chr3_2:71286206-71286225 None:intergenic 35.0%
TGGGACATAATTCAGTCAAA+TGG - chr3_2:71286280-71286299 None:intergenic 35.0%
CCTGAAAAACCAGAAGAAAA+TGG - chr3_2:71286300-71286319 None:intergenic 35.0%
!!! CCATTTTCTTCTGGTTTTTC+AGG + chr3_2:71286297-71286316 Msa0422160:intron 35.0%
! ATTTTCGTTCAAACCACCAT+TGG - chr3_2:71286602-71286621 None:intergenic 35.0%
CTCTCAACAATGCTTTCATT+CGG + chr3_2:71286706-71286725 Msa0422160:intron 35.0%
TTGACCATCTCAATTTGCAT+GGG - chr3_2:71286894-71286913 None:intergenic 35.0%
ATTGACCATCTCAATTTGCA+TGG - chr3_2:71286895-71286914 None:intergenic 35.0%
! CAGCATTTTGTAAGCATCAA+CGG - chr3_2:71287011-71287030 None:intergenic 35.0%
! GCTGTAAAGAAAAGCATATG+AGG + chr3_2:71287027-71287046 Msa0422160:intron 35.0%
TCTTAACAATGTGTGAGAGT+TGG - chr3_2:71287195-71287214 None:intergenic 35.0%
AGTTTGAGCATAATCATCCA+TGG - chr3_2:71287218-71287237 None:intergenic 35.0%
CCAAATGATTAGCACATGAT+TGG - chr3_2:71287401-71287420 None:intergenic 35.0%
CCAATCATGTGCTAATCATT+TGG + chr3_2:71287398-71287417 Msa0422160:intron 35.0%
CTCATCAAGATTCAACTCTA+GGG - chr3_2:71287447-71287466 None:intergenic 35.0%
CTTAGAGACTAAGAAATGCA+AGG + chr3_2:71287538-71287557 Msa0422160:intron 35.0%
GCTCTTAGTGTTAAAAGTTG+AGG + chr3_2:71287681-71287700 Msa0422160:intron 35.0%
AAGCTCAACGTACAAAAGTA+TGG + chr3_2:71287721-71287740 Msa0422160:intron 35.0%
! AGCTCAACGTACAAAAGTAT+GGG + chr3_2:71287722-71287741 Msa0422160:intron 35.0%
! CTCAAGATTTTACAGTCAAG+AGG - chr3_2:71288066-71288085 None:intergenic 35.0%
TAATATCAGTTGTGTAAGCC+TGG + chr3_2:71288112-71288131 Msa0422160:intron 35.0%
! TTTTGCACATTGCAAAAAGG+AGG + chr3_2:71288228-71288247 Msa0422160:intron 35.0%
ATCACACAGAAAAGTTATCC+TGG - chr3_2:71288324-71288343 None:intergenic 35.0%
AAGTAAATGTCACTAGAAGG+GGG - chr3_2:71288452-71288471 None:intergenic 35.0%
GAAGTAAATGTCACTAGAAG+GGG - chr3_2:71288453-71288472 None:intergenic 35.0%
CAATTCAGTTCGTTTCCATT+AGG + chr3_2:71288542-71288561 Msa0422160:intron 35.0%
GCATAAACAAATATCGGACA+TGG + chr3_2:71288736-71288755 Msa0422160:intron 35.0%
!!! GTTTTGGTTCTGATGGTAAA+AGG + chr3_2:71288863-71288882 Msa0422160:intron 35.0%
!! TGTGTCAGATTTTTGTTTGC+AGG + chr3_2:71288969-71288988 Msa0422160:intron 35.0%
AGACATCTTACGTATTGGAA+TGG - chr3_2:71289121-71289140 None:intergenic 35.0%
TATACCCATGCAAATTGAGA+TGG + chr3_2:71289374-71289393 Msa0422160:intron 35.0%
TTGACCATCTCAATTTGCAT+GGG - chr3_2:71286894-71286913 None:intergenic 35.0%
ATTGACCATCTCAATTTGCA+TGG - chr3_2:71286895-71286914 None:intergenic 35.0%
! CTGCATTTTGTAAGCATCAA+CGG - chr3_2:71289498-71289517 None:intergenic 35.0%
! GCAGTAAAGAAAAGCATATG+AGG + chr3_2:71289514-71289533 Msa0422160:three_prime_UTR 35.0%
! ACCATTTGTTAGGTACCTAA+TGG - chr3_2:71289624-71289643 None:intergenic 35.0%
GGAGAAGAATACCATTTGTT+AGG - chr3_2:71289634-71289653 None:intergenic 35.0%
GCATAAACAAATATCGGACA+TGG + chr3_2:71288736-71288755 Msa0422160:intron 35.0%
ATGTGTTACAATAATGCTGG+TGG + chr3_2:71289870-71289889 Msa0422160:intron 35.0%
TGTGTTACAATAATGCTGGT+GGG + chr3_2:71289871-71289890 Msa0422160:intron 35.0%
TGCTGCAAAAGCCATAAAAA+TGG - chr3_2:71290007-71290026 None:intergenic 35.0%
! TTGACAACCTCTGATGTTTT+TGG + chr3_2:71290121-71290140 Msa0422160:three_prime_UTR 35.0%
CAAATTGCCAAAAACATCAG+AGG - chr3_2:71290131-71290150 None:intergenic 35.0%
!!! CTCTGATGTTTTTGGCAATT+TGG + chr3_2:71290129-71290148 Msa0422160:three_prime_UTR 35.0%
GGGTCATGTATTACTGTAAT+AGG + chr3_2:71290336-71290355 Msa0422160:three_prime_UTR 35.0%
! TACTGTAATAGGGTGTCTAA+TGG + chr3_2:71290347-71290366 Msa0422160:three_prime_UTR 35.0%
! AACCTGATTGGTCAATTGTG+TGG - chr3_2:71284942-71284961 None:intergenic 40.0%
GAGGATATCTCAAACCTGAT+TGG - chr3_2:71284954-71284973 None:intergenic 40.0%
TCTATACTAATTGGGAGGAG+AGG - chr3_2:71284973-71284992 None:intergenic 40.0%
! TGGGAGGAGATGATTTTGTA+TGG - chr3_2:71285010-71285029 None:intergenic 40.0%
ATGAAGACTGAACTATTGGG+AGG - chr3_2:71285026-71285045 None:intergenic 40.0%
AGAAACACAACCATTCCTTC+TGG + chr3_2:71285114-71285133 Msa0422160:five_prime_UTR 40.0%
GACTGTCATACAAATGAGGA+GGG - chr3_2:71285176-71285195 None:intergenic 40.0%
TGACTGTCATACAAATGAGG+AGG - chr3_2:71285177-71285196 None:intergenic 40.0%
TTTATCTCCATCGGAGTTGA+CGG - chr3_2:71285309-71285328 None:intergenic 40.0%
TTTACGAAATTCGTCGACGA+CGG + chr3_2:71285423-71285442 Msa0422160:five_prime_UTR 40.0%
!! GTGAATTTTAGTGATGGCAC+TGG + chr3_2:71285636-71285655 Msa0422160:intron 40.0%
ATTGAGCAACTCCTGAAACA+AGG + chr3_2:71285667-71285686 Msa0422160:CDS 40.0%
TTGAGCAACTCCTGAAACAA+GGG + chr3_2:71285668-71285687 Msa0422160:CDS 40.0%
! CACATTACTTCCCTTGTTTC+AGG - chr3_2:71285681-71285700 None:intergenic 40.0%
CTGAAACAAGGGAAGTAATG+TGG + chr3_2:71285679-71285698 Msa0422160:exon 40.0%
CACTAATGGAGATGAAGTAG+AGG + chr3_2:71285728-71285747 Msa0422160:three_prime_UTR 40.0%
GATGAAGTAGAGGATGAAGA+CGG + chr3_2:71285738-71285757 Msa0422160:three_prime_UTR 40.0%
TGACTCTCAAGATTACGATG+AGG + chr3_2:71285785-71285804 Msa0422160:three_prime_UTR 40.0%
CACAGAACCTTGTAGACAAA+AGG - chr3_2:71285870-71285889 None:intergenic 40.0%
ATGAGGGTAAAGCATAGCAT+AGG + chr3_2:71286105-71286124 Msa0422160:intron 40.0%
! CACAGGGCACTATATAAGTA+AGG - chr3_2:71286384-71286403 None:intergenic 40.0%
GGAGAGTTCCAAATCATTGT+TGG - chr3_2:71286631-71286650 None:intergenic 40.0%
TAGACCCATGCAAATTGAGA+TGG + chr3_2:71286887-71286906 Msa0422160:intron 40.0%
ATTATGTTTGCAGTGGCTCA+CGG + chr3_2:71286939-71286958 Msa0422160:intron 40.0%
GTGAACAATATAACTCGCGA+TGG + chr3_2:71286961-71286980 Msa0422160:three_prime_UTR 40.0%
CTCACACATTGTTAAGACCA+TGG + chr3_2:71287198-71287217 Msa0422160:intron 40.0%
GCTCTCATAAGCATTAGAGT+TGG + chr3_2:71287294-71287313 Msa0422160:intron 40.0%
AAAGCCATGCGCTAATACAA+GGG + chr3_2:71287364-71287383 Msa0422160:intron 40.0%
! TTTTCCCTTGTATTAGCGCA+TGG - chr3_2:71287371-71287390 None:intergenic 40.0%
GCTCATCAAGATTCAACTCT+AGG - chr3_2:71287448-71287467 None:intergenic 40.0%
TAAGAGCTTGAGCTTGTCTT+TGG - chr3_2:71287668-71287687 None:intergenic 40.0%
AGTGTTAAAAGTTGAGGTCG+AGG + chr3_2:71287687-71287706 Msa0422160:intron 40.0%
! CGTACAAAAGTATGGGACAA+TGG + chr3_2:71287729-71287748 Msa0422160:intron 40.0%
!! TAAAGACCCTTGCTGTTGAT+GGG - chr3_2:71287768-71287787 None:intergenic 40.0%
TGAACAGCTGCAGATATTGA+AGG + chr3_2:71287796-71287815 Msa0422160:intron 40.0%
CTGCAGATATTGAAGGATGA+AGG + chr3_2:71287803-71287822 Msa0422160:intron 40.0%
AGATATTGAAGGATGAAGGC+TGG + chr3_2:71287807-71287826 Msa0422160:intron 40.0%
AAGAAACTCCTGACAACTAG+TGG + chr3_2:71288251-71288270 Msa0422160:intron 40.0%
GAGATTATCCACTAGTTGTC+AGG - chr3_2:71288262-71288281 None:intergenic 40.0%
TGGATAATCTCACAAAGCTG+TGG + chr3_2:71288271-71288290 Msa0422160:intron 40.0%
GGATAATCTCACAAAGCTGT+GGG + chr3_2:71288272-71288291 Msa0422160:intron 40.0%
GATAATCTCACAAAGCTGTG+GGG + chr3_2:71288273-71288292 Msa0422160:intron 40.0%
AGTAAATGTCACTAGAAGGG+GGG - chr3_2:71288451-71288470 None:intergenic 40.0%
TAACATTAACAGAGCAGCCA+TGG - chr3_2:71288827-71288846 None:intergenic 40.0%
TCTGATGGTAAAAGGTCCAT+AGG + chr3_2:71288871-71288890 Msa0422160:intron 40.0%
TGGTGTAATGTGTGAGTAGA+TGG + chr3_2:71288910-71288929 Msa0422160:intron 40.0%
ATTATGTTTGCAGTGGCTCA+CGG + chr3_2:71286939-71286958 Msa0422160:intron 40.0%
GCCATTAGGTACCTAACAAA+TGG + chr3_2:71289620-71289639 Msa0422160:intron 40.0%
GTGTTACAATAATGCTGGTG+GGG + chr3_2:71289872-71289891 Msa0422160:intron 40.0%
!! AAGAGAGTAGAAGCACCATT+TGG - chr3_2:71290064-71290083 None:intergenic 40.0%
! CTGATTGGTCAATTGTGTGG+TGG - chr3_2:71284939-71284958 None:intergenic 45.0%
CACCACACAATTGACCAATC+AGG + chr3_2:71284937-71284956 Msa0422160:five_prime_UTR 45.0%
GATCAACGAACCAGAAGGAA+TGG - chr3_2:71285127-71285146 None:intergenic 45.0%
TGTCATACAAATGAGGAGGG+AGG - chr3_2:71285173-71285192 None:intergenic 45.0%
TGTACTTTAATCAGCGGCGA+TGG - chr3_2:71285365-71285384 None:intergenic 45.0%
!! AAACAGTTGATGATGGTCGG+CGG + chr3_2:71285459-71285478 Msa0422160:exon 45.0%
GCATAGCATAGGAGCTTCAT+TGG + chr3_2:71286116-71286135 Msa0422160:intron 45.0%
AAAATGGGGCGCAAATCACA+GGG - chr3_2:71286400-71286419 None:intergenic 45.0%
AAAAATGGGGCGCAAATCAC+AGG - chr3_2:71286401-71286420 None:intergenic 45.0%
!!! ATTTTGAGATTGGGGCTGCT+TGG + chr3_2:71286545-71286564 Msa0422160:intron 45.0%
GTAGCCATATTGCCAACCAA+TGG + chr3_2:71286583-71286602 Msa0422160:intron 45.0%
! ACCACCATTGGTTGGCAATA+TGG - chr3_2:71286590-71286609 None:intergenic 45.0%
TCGTTCAAACCACCATTGGT+TGG - chr3_2:71286598-71286617 None:intergenic 45.0%
GAAAGCCATGCGCTAATACA+AGG + chr3_2:71287363-71287382 Msa0422160:intron 45.0%
TGCAATTCCCATCAACAGCA+AGG + chr3_2:71287758-71287777 Msa0422160:intron 45.0%
GCAATTCCCATCAACAGCAA+GGG + chr3_2:71287759-71287778 Msa0422160:intron 45.0%
!! GTAAAGACCCTTGCTGTTGA+TGG - chr3_2:71287769-71287788 None:intergenic 45.0%
TGTATTCTCTTAGCCTCACC+AGG - chr3_2:71288133-71288152 None:intergenic 45.0%
! TCAAGCTCGAGCTTTTACAG+AGG - chr3_2:71288173-71288192 None:intergenic 45.0%
TGTATTCTCTAAGCCTCACC+AGG - chr3_2:71288203-71288222 None:intergenic 45.0%
GGACTGGACTAACCCATATT+GGG + chr3_2:71288294-71288313 Msa0422160:intron 45.0%
GACTGGACTAACCCATATTG+GGG + chr3_2:71288295-71288314 Msa0422160:intron 45.0%
ACTGGACTAACCCATATTGG+GGG + chr3_2:71288296-71288315 Msa0422160:intron 45.0%
TATCCTGGTTCCCCCAATAT+GGG - chr3_2:71288309-71288328 None:intergenic 45.0%
TTATCCTGGTTCCCCCAATA+TGG - chr3_2:71288310-71288329 None:intergenic 45.0%
TATCTCATTGGATGCAGCTC+AGG + chr3_2:71288630-71288649 Msa0422160:intron 45.0%
GGTGACAATATAACTCGCGA+TGG + chr3_2:71289448-71289467 Msa0422160:three_prime_UTR 45.0%
CGATTCAGTTCGTTGCCATT+AGG + chr3_2:71289606-71289625 Msa0422160:intron 45.0%
TATCTCATTGGATGCAGCTC+AGG + chr3_2:71288630-71288649 Msa0422160:intron 45.0%
GACTGTTCCAGCATTCCAAA+TGG + chr3_2:71290046-71290065 Msa0422160:three_prime_UTR 45.0%
!! AGAAGCACCATTTGGAATGC+TGG - chr3_2:71290056-71290075 None:intergenic 45.0%
ATGTCTTGCAGAAGCTGTCT+TGG + chr3_2:71290183-71290202 Msa0422160:three_prime_UTR 45.0%
TTGCAGAAGCTGTCTTGGTT+TGG + chr3_2:71290188-71290207 Msa0422160:three_prime_UTR 45.0%
!! GAAGCTGTCTTGGTTTGGAA+TGG + chr3_2:71290193-71290212 Msa0422160:three_prime_UTR 45.0%
!!! ATTTTTTATTTCAAAAAAAT+AGG - chr3_2:71285080-71285099 None:intergenic 5.0%
!!! ATTAAGATTATAATTTTATT+TGG + chr3_2:71287122-71287141 Msa0422160:intron 5.0%
CATACAAATGAGGAGGGAGG+TGG - chr3_2:71285170-71285189 None:intergenic 50.0%
GCCATATTGCCAACCAATGG+TGG + chr3_2:71286586-71286605 Msa0422160:intron 50.0%
CTTGAGCTTGTCTTTGGACC+AGG - chr3_2:71287662-71287681 None:intergenic 50.0%
TCAGTTGTGTAAGCCTGGTG+AGG + chr3_2:71288117-71288136 Msa0422160:intron 50.0%
GGGACTGGACTAACCCATAT+TGG + chr3_2:71288293-71288312 Msa0422160:intron 50.0%
TAACCCATATTGGGGGAACC+AGG + chr3_2:71288303-71288322 Msa0422160:intron 50.0%
GAGCGGAGTTTGAACACGTA+AGG + chr3_2:71288652-71288671 Msa0422160:intron 50.0%
ATTCCCTGCATAGACTGCCA+TGG + chr3_2:71288807-71288826 Msa0422160:intron 50.0%
GAGCGGAGTTTGAACACGTA+AGG + chr3_2:71288652-71288671 Msa0422160:intron 50.0%
CAACAGCCTAACTCCGATGC+CGG - chr3_2:71285243-71285262 None:intergenic 55.0%
TCTTCTTTCATCACCGCCGC+TGG + chr3_2:71285281-71285300 Msa0422160:five_prime_UTR 55.0%
! ATCGGAGTTGACGGATCCAG+CGG - chr3_2:71285300-71285319 None:intergenic 55.0%
ACGAAATTCGTCGACGACGG+CGG + chr3_2:71285426-71285445 Msa0422160:five_prime_UTR 55.0%
TCGGCGGACATCAGAGAAGA+AGG + chr3_2:71285475-71285494 Msa0422160:CDS 55.0%
CAGTGAATGTTCCGCCGACA+TGG + chr3_2:71285511-71285530 Msa0422160:CDS 55.0%
AGTAGAGGATGAAGACGGCG+AGG + chr3_2:71285743-71285762 Msa0422160:three_prime_UTR 55.0%
TCACTGTTCACACACGCTCC+TGG + chr3_2:71287641-71287660 Msa0422160:intron 55.0%
CTCGAGCTTGAGTGTAAGCC+TGG + chr3_2:71288182-71288201 Msa0422160:intron 55.0%
GCTTGAGTGTAAGCCTGGTG+AGG + chr3_2:71288187-71288206 Msa0422160:intron 55.0%
TCTCACAAAGCTGTGGGGAC+TGG + chr3_2:71288278-71288297 Msa0422160:intron 55.0%
CATTGGATGCAGCTCAGGAG+CGG + chr3_2:71288635-71288654 Msa0422160:intron 55.0%
CAGCCATGGCAGTCTATGCA+GGG - chr3_2:71288813-71288832 None:intergenic 55.0%
CATTGGATGCAGCTCAGGAG+CGG + chr3_2:71288635-71288654 Msa0422160:intron 55.0%
TGCTGGTGGGGTTGTAAGCA+AGG + chr3_2:71289884-71289903 Msa0422160:intron 55.0%
ACCGCCACCGTCATCATCGT+CGG + chr3_2:71285215-71285234 Msa0422160:five_prime_UTR 60.0%
ACCGTCATCATCGTCGGGAC+CGG + chr3_2:71285221-71285240 Msa0422160:five_prime_UTR 60.0%
ATCATCGTCGGGACCGGCAT+CGG + chr3_2:71285227-71285246 Msa0422160:five_prime_UTR 60.0%
GCTGGATCCGTCAACTCCGA+TGG + chr3_2:71285299-71285318 Msa0422160:five_prime_UTR 60.0%
GGATGAAGACGGCGAGGATG+TGG + chr3_2:71285749-71285768 Msa0422160:three_prime_UTR 60.0%
GCAGCCATGGCAGTCTATGC+AGG - chr3_2:71288814-71288833 None:intergenic 60.0%
ATGAGGAGGGAGGTGGTCGC+CGG - chr3_2:71285163-71285182 None:intergenic 65.0%
!! GACGATGATGACGGTGGCGG+TGG - chr3_2:71285216-71285235 None:intergenic 65.0%
!! CCCGACGATGATGACGGTGG+CGG - chr3_2:71285219-71285238 None:intergenic 65.0%
CCGCCACCGTCATCATCGTC+GGG + chr3_2:71285216-71285235 Msa0422160:five_prime_UTR 65.0%
!! GGTCCCGACGATGATGACGG+TGG - chr3_2:71285222-71285241 None:intergenic 65.0%
GCCGGTCCCGACGATGATGA+CGG - chr3_2:71285225-71285244 None:intergenic 65.0%
! TCGGGACCGGCATCGGAGTT+AGG + chr3_2:71285234-71285253 Msa0422160:five_prime_UTR 65.0%
! GGAGTTGACGGATCCAGCGG+CGG - chr3_2:71285297-71285316 None:intergenic 65.0%
AGGAGGGAGGTGGTCGCCGG+TGG - chr3_2:71285160-71285179 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 71284926 71290433 71284926 ID=Msa0422160;Name=Msa0422160
chr3_2 mRNA 71284926 71290433 71284926 ID=Msa0422160-mRNA-1;Parent=Msa0422160;Name=Msa0422160-mRNA-1;_AED=0.27;_eAED=0.27;_QI=542|0.88|0.8|1|0.55|0.6|10|941|43
chr3_2 exon 71284926 71285549 71284926 ID=Msa0422160-mRNA-1:exon:17423;Parent=Msa0422160-mRNA-1
chr3_2 exon 71285647 71285806 71285647 ID=Msa0422160-mRNA-1:exon:17424;Parent=Msa0422160-mRNA-1
chr3_2 exon 71285964 71286009 71285964 ID=Msa0422160-mRNA-1:exon:17425;Parent=Msa0422160-mRNA-1
chr3_2 exon 71286154 71286219 71286154 ID=Msa0422160-mRNA-1:exon:17426;Parent=Msa0422160-mRNA-1
chr3_2 exon 71286319 71286374 71286319 ID=Msa0422160-mRNA-1:exon:17427;Parent=Msa0422160-mRNA-1
chr3_2 exon 71286952 71286982 71286952 ID=Msa0422160-mRNA-1:exon:17428;Parent=Msa0422160-mRNA-1
chr3_2 exon 71288647 71288668 71288647 ID=Msa0422160-mRNA-1:exon:17429;Parent=Msa0422160-mRNA-1
chr3_2 exon 71289440 71289535 71289440 ID=Msa0422160-mRNA-1:exon:17430;Parent=Msa0422160-mRNA-1
chr3_2 exon 71289628 71289732 71289628 ID=Msa0422160-mRNA-1:exon:17431;Parent=Msa0422160-mRNA-1
chr3_2 exon 71290025 71290433 71290025 ID=Msa0422160-mRNA-1:exon:17432;Parent=Msa0422160-mRNA-1
chr3_2 five_prime_UTR 71284926 71285467 71284926 ID=Msa0422160-mRNA-1:five_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 CDS 71285468 71285549 71285468 ID=Msa0422160-mRNA-1:cds;Parent=Msa0422160-mRNA-1
chr3_2 CDS 71285647 71285696 71285647 ID=Msa0422160-mRNA-1:cds;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71285697 71285806 71285697 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71285964 71286009 71285964 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71286154 71286219 71286154 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71286319 71286374 71286319 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71286952 71286982 71286952 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71288647 71288668 71288647 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71289440 71289535 71289440 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71289628 71289732 71289628 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
chr3_2 three_prime_UTR 71290025 71290433 71290025 ID=Msa0422160-mRNA-1:three_prime_utr;Parent=Msa0422160-mRNA-1
Gene Sequence

>Msa0422160

ATGATGGTCGGCGGACATCAGAGAAGAAGGATGATGATTGCAGCAGTGAATGTTCCGCCGACATGGTTCAATTTTTTCACAGTGATGGCACTGGCTCGATTGATTGAGCAACTCCTGAAACAAGGGAAGTAA
Protein sequence

>Msa0422160

MMVGGHQRRRMMIAAVNVPPTWFNFFTVMALARLIEQLLKQGK*