Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430830 | XP_024634192.1 | 92.504 | 667 | 13 | 2 | 1 | 633 | 1 | 664 | 0.0 | 1236 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430830 | sp|F4K4L7|TAF4B_ARATH | 41.518 | 672 | 276 | 20 | 1 | 633 | 1 | 594 | 1.50e-115 | 368 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430830 | A0A396IXC6 | 92.504 | 667 | 13 | 2 | 1 | 633 | 1 | 664 | 0.0 | 1236 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0380930 | Msa0430830 | 0.917109 | 7.920989e-86 | -8.615850e-47 |
Msa0430830 | Msa0434290 | 0.824846 | 6.468862e-54 | -8.615850e-47 |
Msa0430830 | Msa0434390 | 0.824554 | 7.580295e-54 | -8.615850e-47 |
Msa0430830 | Msa0714760 | 0.802692 | 4.972217e-49 | -8.615850e-47 |
Msa0430830 | Msa0733010 | 0.820789 | 5.695923e-53 | -8.615850e-47 |
Msa0430830 | Msa0773990 | 0.817687 | 2.897374e-52 | -8.615850e-47 |
Msa0430830 | Msa0836180 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
Msa0430830 | Msa0880800 | 0.804316 | 2.290756e-49 | -8.615850e-47 |
Msa0430830 | Msa1122150 | 0.806872 | 6.659923e-50 | -8.615850e-47 |
Msa0430830 | Msa1213890 | 0.803900 | 2.795913e-49 | -8.615850e-47 |
Msa0430830 | Msa1218570 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
Msa0430830 | Msa1299400 | -0.800329 | 1.516448e-48 | -8.615850e-47 |
Msa0430830 | Msa1305530 | 0.807141 | 5.844005e-50 | -8.615850e-47 |
Msa0430830 | Msa1436590 | 0.800008 | 1.762593e-48 | -8.615850e-47 |
Msa0430830 | Msa1445800 | 0.971284 | 6.366883e-133 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430830 | MtrunA17_Chr3g0134641 | 92.504 | 667 | 13 | 2 | 1 | 633 | 1 | 664 | 0.0 | 1236 |
Msa0430830 | MtrunA17_Chr3g0134671 | 65.455 | 330 | 95 | 2 | 173 | 483 | 8 | 337 | 2.74e-140 | 415 |
Msa0430830 | MtrunA17_Chr3g0134691 | 82.456 | 114 | 20 | 0 | 320 | 433 | 1 | 114 | 4.75e-60 | 196 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430830 | AT5G43130.3 | 41.518 | 672 | 276 | 20 | 1 | 633 | 1 | 594 | 5.61e-117 | 367 |
Msa0430830 | AT5G43130.1 | 41.518 | 672 | 276 | 20 | 1 | 633 | 1 | 594 | 6.03e-117 | 368 |
Msa0430830 | AT5G43130.2 | 41.518 | 672 | 276 | 20 | 1 | 633 | 1 | 594 | 1.52e-116 | 368 |
Msa0430830 | AT1G27720.6 | 29.314 | 539 | 268 | 16 | 150 | 633 | 26 | 506 | 2.60e-41 | 159 |
Msa0430830 | AT1G27720.9 | 29.499 | 539 | 267 | 16 | 150 | 633 | 1 | 481 | 6.33e-41 | 159 |
Msa0430830 | AT1G27720.4 | 29.314 | 539 | 268 | 16 | 150 | 633 | 26 | 506 | 6.51e-41 | 159 |
Msa0430830 | AT1G27720.1 | 29.714 | 525 | 256 | 16 | 164 | 633 | 55 | 521 | 4.56e-40 | 156 |
Msa0430830 | AT1G27720.2 | 29.808 | 520 | 252 | 16 | 169 | 633 | 2 | 463 | 3.44e-39 | 152 |
Msa0430830 | AT1G27720.8 | 29.808 | 520 | 252 | 16 | 169 | 633 | 2 | 463 | 3.44e-39 | 152 |
Msa0430830 | AT1G27720.3 | 29.808 | 520 | 252 | 16 | 169 | 633 | 2 | 463 | 1.14e-38 | 152 |
Msa0430830 | AT1G27720.7 | 29.808 | 520 | 252 | 16 | 169 | 633 | 2 | 463 | 1.14e-38 | 152 |
Msa0430830 | AT1G27720.5 | 30.061 | 489 | 230 | 15 | 199 | 633 | 28 | 458 | 1.36e-37 | 149 |
Find 251 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAACAGCGGCTAGGAAATT+TGG | 0.161653 | 3_2:-82698109 | Msa0430830:intron |
CTGTTAGTGGTGTTGATCTT+AGG | 0.200282 | 3_2:-82700751 | Msa0430830:CDS |
TCAGACTTTCCTCCTCTTCT+TGG | 0.210744 | 3_2:+82700562 | None:intergenic |
CACACCAAACTTCAAATTCT+TGG | 0.235872 | 3_2:-82702293 | Msa0430830:CDS |
TGCCCTGTCCTTGGGAAGTT+GGG | 0.254860 | 3_2:+82703243 | None:intergenic |
GCTGCTGTTGCTGCTTATTA+AGG | 0.269901 | 3_2:+82702556 | None:intergenic |
CGGTGGTTCCGTCAGGGTTT+AGG | 0.290502 | 3_2:+82704307 | None:intergenic |
CCTTTCTGCAACTCATTCTT+CGG | 0.291631 | 3_2:-82704075 | Msa0430830:five_prime_UTR |
AACCCACATCATTTAGTTTC+CGG | 0.293138 | 3_2:+82699974 | None:intergenic |
GCAAAATGGGAAGCAGTATT+TGG | 0.299631 | 3_2:+82702021 | None:intergenic |
GTGCCTCAAGTGGTTTCTTC+TGG | 0.299881 | 3_2:+82700956 | None:intergenic |
GGAAGTTGGGGAATCAATAT+AGG | 0.315128 | 3_2:+82703256 | None:intergenic |
AACATCAGCAGAACAAAATT+CGG | 0.318096 | 3_2:-82702268 | Msa0430830:CDS |
GTAACAGTTGGCATCCTTAC+AGG | 0.319184 | 3_2:+82702837 | None:intergenic |
TCGAGAAGCTTTACTATAGA+TGG | 0.322150 | 3_2:+82703943 | None:intergenic |
CAGAAAACGGTGCGTTGTTA+TGG | 0.325198 | 3_2:-82703968 | Msa0430830:exon |
AAAACCAATACAGGTTCTTC+TGG | 0.332997 | 3_2:-82702870 | Msa0430830:CDS |
GATCCACCTGGCATTCTCTT+AGG | 0.334735 | 3_2:+82702345 | None:intergenic |
AAAAGAAAACAAATAATTTC+AGG | 0.335646 | 3_2:+82697272 | None:intergenic |
TTGAACATTGATGTTATTGT+AGG | 0.343474 | 3_2:-82697220 | Msa0430830:three_prime_UTR |
GACAGAGTAATGACATAAAT+AGG | 0.359210 | 3_2:+82700491 | None:intergenic |
CCGATACAAGAGTGATGATT+TGG | 0.364244 | 3_2:+82697994 | None:intergenic |
TTGAGGACGGTGGTTCCGTC+AGG | 0.366477 | 3_2:+82704300 | None:intergenic |
AGCCGGACAAAATGTTCTTT+AGG | 0.366896 | 3_2:+82703038 | None:intergenic |
GCATACTGAGATTGTTCATT+GGG | 0.368010 | 3_2:+82703376 | None:intergenic |
CTTTCTGCAACTCATTCTTC+GGG | 0.370058 | 3_2:-82704074 | Msa0430830:intron |
CCTGCATTACTACAAGAAAA+AGG | 0.372170 | 3_2:+82697110 | None:intergenic |
CAACAGCGGCTAGGAAATTT+GGG | 0.376940 | 3_2:-82698108 | Msa0430830:intron |
ACTGATATCCATAGTTGAAT+AGG | 0.377720 | 3_2:+82702692 | None:intergenic |
GACAAAATACAACAGCTATA+AGG | 0.387384 | 3_2:+82700406 | None:intergenic |
TTTGTGCTCCTTCCTGATGA+TGG | 0.388806 | 3_2:+82699448 | None:intergenic |
CAGATCCCAACTAGCACTTC+TGG | 0.390772 | 3_2:-82701018 | Msa0430830:CDS |
AACTTCTGTAGATAACATAT+CGG | 0.393159 | 3_2:-82697353 | Msa0430830:intron |
GTAATGCATTGTAGGTGAAC+AGG | 0.394225 | 3_2:-82699651 | Msa0430830:intron |
TGAGATTGTTGATGAGAAAC+AGG | 0.395078 | 3_2:+82703466 | None:intergenic |
TGAAACTCGACTGTCATCCT+TGG | 0.401173 | 3_2:+82700605 | None:intergenic |
GATCTGGTTGAGATGCAAAA+TGG | 0.404769 | 3_2:+82702007 | None:intergenic |
GAGGATGAAACTATGCATTC+AGG | 0.420773 | 3_2:-82703913 | Msa0430830:CDS |
CGTAGTAAACAGGTACCATT+TGG | 0.423941 | 3_2:-82703289 | Msa0430830:CDS |
TTCTTGTACTAATGAAGAAC+CGG | 0.426067 | 3_2:-82697178 | Msa0430830:three_prime_UTR |
TGGCAGCCCGAGCTGCTGTT+GGG | 0.426995 | 3_2:-82699591 | Msa0430830:three_prime_UTR |
TTTGCCAAGAATTTGAAGTT+TGG | 0.427441 | 3_2:+82702289 | None:intergenic |
GAAACAAAAGGTGTCATCTC+TGG | 0.429956 | 3_2:-82700807 | Msa0430830:CDS |
TCGGGATGGTGATATGCATC+AGG | 0.432266 | 3_2:-82697334 | Msa0430830:three_prime_UTR |
TGTTAGTGGTGTTGATCTTA+GGG | 0.434851 | 3_2:-82700750 | Msa0430830:intron |
CATAATTAGAATGTCAAAAC+AGG | 0.436843 | 3_2:-82700205 | Msa0430830:intron |
GGAGAGATTCGTCTTGTGAT+TGG | 0.437581 | 3_2:+82703503 | None:intergenic |
TTTAGCTCCGTTTCGGAAGA+AGG | 0.439250 | 3_2:+82703601 | None:intergenic |
TTGCCCTGTCCTTGGGAAGT+TGG | 0.442748 | 3_2:+82703242 | None:intergenic |
TTGACTAACAGCAATAGAAC+TGG | 0.444515 | 3_2:+82702611 | None:intergenic |
AATTGATGGCTGAGCAAGCC+AGG | 0.445191 | 3_2:-82699543 | Msa0430830:three_prime_UTR |
TGAGCCAACCTATTCAACTA+TGG | 0.449243 | 3_2:-82702700 | Msa0430830:CDS |
CCAAGTCAATCGTAGTAAAC+AGG | 0.449254 | 3_2:-82703299 | Msa0430830:CDS |
CCTGAGTTCCCAAGCGAAGT+TGG | 0.451526 | 3_2:+82699397 | None:intergenic |
TTCCCCAACTTCCCAAGGAC+AGG | 0.451929 | 3_2:-82703246 | Msa0430830:CDS |
CGCAAATCTTCACCATCATC+AGG | 0.452328 | 3_2:-82699460 | Msa0430830:three_prime_UTR |
AACTTATCTAGATATGTACT+TGG | 0.453204 | 3_2:-82700440 | Msa0430830:three_prime_UTR |
AACACAGTAAAGTTTGAAAC+CGG | 0.455501 | 3_2:+82697159 | None:intergenic |
AATGATGTTACGGCTGTTAG+TGG | 0.455727 | 3_2:-82700764 | Msa0430830:CDS |
ACATTTCTATGTTTGAATGC+AGG | 0.456397 | 3_2:+82697086 | None:intergenic |
GTATAGGTAGAGGGTAGTTC+CGG | 0.456726 | 3_2:-82699787 | Msa0430830:intron |
CCGGCTTATGAAAGGGATTG+TGG | 0.457315 | 3_2:-82703021 | Msa0430830:CDS |
TGCATACTGAGATTGTTCAT+TGG | 0.459463 | 3_2:+82703375 | None:intergenic |
ACATCAGCAGAACAAAATTC+GGG | 0.460150 | 3_2:-82702267 | Msa0430830:CDS |
AGAAAAGGTCCAACTTCGCT+TGG | 0.461318 | 3_2:-82699406 | Msa0430830:three_prime_UTR |
AGTTGCATTGCCCTGTCCTT+GGG | 0.462118 | 3_2:+82703235 | None:intergenic |
TGCTCTCAGATTTGTGAGAA+GGG | 0.462901 | 3_2:-82704222 | Msa0430830:five_prime_UTR |
TGACACCAGAAGTGCTAGTT+GGG | 0.464008 | 3_2:+82701013 | None:intergenic |
CGAAGAATGAGTTGCAGAAA+GGG | 0.464957 | 3_2:+82704076 | None:intergenic |
CCAGACTGACTGTCAAAATC+AGG | 0.465391 | 3_2:-82703653 | Msa0430830:CDS |
CTGCTCTCAGATTTGTGAGA+AGG | 0.465476 | 3_2:-82704223 | Msa0430830:five_prime_UTR |
AAGCCAGGCAGAAGCGTGAA+GGG | 0.465558 | 3_2:-82699528 | Msa0430830:three_prime_UTR |
ATTAACAAAAGTGCAACAAC+AGG | 0.467853 | 3_2:-82702976 | Msa0430830:intron |
AGCAAATCATGACAATGAAT+AGG | 0.467989 | 3_2:-82700044 | Msa0430830:three_prime_UTR |
AAGTTGCATTGCCCTGTCCT+TGG | 0.468973 | 3_2:+82703234 | None:intergenic |
CCTGTTTACTACGATTGACT+TGG | 0.469413 | 3_2:+82703299 | None:intergenic |
TAGGAAAGCAAGGGAAGAGT+GGG | 0.469487 | 3_2:-82700025 | Msa0430830:three_prime_UTR |
TGATCAGCTTAATGATGTTA+CGG | 0.473692 | 3_2:-82700774 | Msa0430830:CDS |
AACTTTATTTAACAAATTGA+AGG | 0.475782 | 3_2:-82703209 | Msa0430830:intron |
CACAAAAGATAATCAAGAAA+AGG | 0.477074 | 3_2:-82699431 | Msa0430830:three_prime_UTR |
CTGTCCAGAAGAACCTGTAT+TGG | 0.477865 | 3_2:+82702866 | None:intergenic |
TTCTGTATCGGTTCCACGAC+AGG | 0.479567 | 3_2:+82703568 | None:intergenic |
ATACATTTCCCATCGACATA+TGG | 0.479887 | 3_2:-82702531 | Msa0430830:CDS |
GAAACTCGACTGTCATCCTT+GGG | 0.480685 | 3_2:+82700606 | None:intergenic |
CGGCTTATGAAAGGGATTGT+GGG | 0.481586 | 3_2:-82703020 | Msa0430830:CDS |
CTTACAGAGACAGTTGGATC+TGG | 0.481792 | 3_2:+82701991 | None:intergenic |
GTTCTTCCCCTCCTCCTCCA+AGG | 0.485579 | 3_2:-82700930 | Msa0430830:intron |
GTGGCAGCCCGAGCTGCTGT+TGG | 0.487103 | 3_2:-82699592 | Msa0430830:three_prime_UTR |
AATCAAGAAAAGGAGAGAAA+AGG | 0.491500 | 3_2:-82699421 | Msa0430830:three_prime_UTR |
GCAGCAGATGAGTAATCAAC+AGG | 0.495484 | 3_2:-82703347 | Msa0430830:CDS |
AGTCACGATTTCCGTTCTCT+TGG | 0.495553 | 3_2:-82704101 | Msa0430830:five_prime_UTR |
GCGAATCGGTGCCGTGGAAG+CGG | 0.498023 | 3_2:+82704245 | None:intergenic |
CTGAAGAAGCATTATGAGAA+TGG | 0.503259 | 3_2:+82702739 | None:intergenic |
GAGGGTAGTTCCGGAGTTGA+TGG | 0.505527 | 3_2:-82699778 | Msa0430830:three_prime_UTR |
CTACGATTGACTTGGCCACT+CGG | 0.505916 | 3_2:+82703307 | None:intergenic |
GAAGGATGTAATTGCAGTCT+TGG | 0.506286 | 3_2:-82698035 | Msa0430830:three_prime_UTR |
CTCCTTGTCACCATCAACTC+CGG | 0.506910 | 3_2:+82699768 | None:intergenic |
CGAGAAGCTTTACTATAGAT+GGG | 0.507279 | 3_2:+82703944 | None:intergenic |
ATGACTCACCTTGGAGGAGG+AGG | 0.509496 | 3_2:+82700922 | None:intergenic |
GATGAGAAACAGGTAAAGTC+TGG | 0.511928 | 3_2:+82703476 | None:intergenic |
ATCTGGTTGAGATGCAAAAT+GGG | 0.513802 | 3_2:+82702008 | None:intergenic |
GCCAGGCAGAAGCGTGAAGG+GGG | 0.513828 | 3_2:-82699526 | Msa0430830:three_prime_UTR |
GCTGTCAAAGTGGCAATTGA+TGG | 0.514119 | 3_2:-82699557 | Msa0430830:three_prime_UTR |
ATAGGAAAGCAAGGGAAGAG+TGG | 0.515038 | 3_2:-82700026 | Msa0430830:three_prime_UTR |
GATGAGTAATCAACAGGCCT+CGG | 0.515163 | 3_2:-82703341 | Msa0430830:CDS |
GCCCTGTCCTTGGGAAGTTG+GGG | 0.516262 | 3_2:+82703244 | None:intergenic |
TCGATTCAAAGCAGCTTGGA+AGG | 0.517710 | 3_2:+82703876 | None:intergenic |
ATTTAATGATCCCCATGCAT+TGG | 0.518932 | 3_2:-82702799 | Msa0430830:CDS |
CCGAAGAATGAGTTGCAGAA+AGG | 0.521722 | 3_2:+82704075 | None:intergenic |
ATCTAGATAAGTTTGAAGAA+TGG | 0.523013 | 3_2:+82700450 | None:intergenic |
ATCCTACAGTAAGAAACAAA+AGG | 0.523762 | 3_2:-82700819 | Msa0430830:intron |
GAAAAGGTCCAACTTCGCTT+GGG | 0.524007 | 3_2:-82699405 | Msa0430830:three_prime_UTR |
CACTGCCTCCATATGTCGAT+GGG | 0.524966 | 3_2:+82702523 | None:intergenic |
GGTCAAAATGAACAGGGTAG+TGG | 0.525556 | 3_2:-82702135 | Msa0430830:intron |
CAAGCCAGGCAGAAGCGTGA+AGG | 0.525670 | 3_2:-82699529 | Msa0430830:three_prime_UTR |
TCATTAAGCTGATCAATGCT+TGG | 0.527111 | 3_2:+82700782 | None:intergenic |
CCAAATCATCACTCTTGTAT+CGG | 0.528182 | 3_2:-82697994 | Msa0430830:three_prime_UTR |
CAGGGTAGTGGCATCAATCA+AGG | 0.532553 | 3_2:-82702123 | Msa0430830:CDS |
CCAACTTCGCTTGGGAACTC+AGG | 0.532682 | 3_2:-82699397 | Msa0430830:intron |
GATACAGAATGTTGCCTCAC+AGG | 0.538041 | 3_2:-82703554 | Msa0430830:CDS |
GTGACCGAGTGTGGCTTGAA+AGG | 0.539175 | 3_2:-82700374 | Msa0430830:three_prime_UTR |
TGTCTCGACCTCCGCTTCCA+CGG | 0.539291 | 3_2:-82704256 | Msa0430830:five_prime_UTR |
GGCAGCCCGAGCTGCTGTTG+GGG | 0.539687 | 3_2:-82699590 | Msa0430830:three_prime_UTR |
ATGACACCAGAAGTGCTAGT+TGG | 0.539850 | 3_2:+82701012 | None:intergenic |
CAAATCTGAGAGCAGCGAAT+CGG | 0.540788 | 3_2:+82704231 | None:intergenic |
GAAGTTGGGGAATCAATATA+GGG | 0.541384 | 3_2:+82703257 | None:intergenic |
AAGAAACCACTTGAGGCACT+TGG | 0.542539 | 3_2:-82700952 | Msa0430830:CDS |
AATGATCCTAAGAGAATGCC+AGG | 0.542547 | 3_2:-82702351 | Msa0430830:CDS |
AGGCTGAAACAGAAAAGCTC+CGG | 0.543349 | 3_2:-82699993 | Msa0430830:three_prime_UTR |
TAACAGTTGGCATCCTTACA+GGG | 0.543436 | 3_2:+82702838 | None:intergenic |
CACCTTTCTGATTCTGACGC+AGG | 0.544987 | 3_2:-82703826 | Msa0430830:intron |
ATAGGGAGCAACAAGCCAAA+TGG | 0.545091 | 3_2:+82703274 | None:intergenic |
GGGGACAATATATATAAGAA+AGG | 0.546181 | 3_2:-82704188 | Msa0430830:five_prime_UTR |
GAATCATGAGGATGAGGTTG+TGG | 0.546439 | 3_2:+82702444 | None:intergenic |
TGAGGACGGTGGTTCCGTCA+GGG | 0.546593 | 3_2:+82704301 | None:intergenic |
CGAGGAACTAGTGGTTGTCC+CGG | 0.549173 | 3_2:+82702479 | None:intergenic |
AAGGTCTGAACTCTGAAAAG+AGG | 0.549675 | 3_2:-82704169 | Msa0430830:five_prime_UTR |
CCATCGACATATGGAGGCAG+TGG | 0.550413 | 3_2:-82702522 | Msa0430830:CDS |
TCTGATACTCCAACCGAATG+AGG | 0.551257 | 3_2:-82697953 | Msa0430830:intron |
GATGCAGTTGTGCCAATGCA+TGG | 0.551349 | 3_2:+82702787 | None:intergenic |
ATTAAGGCCTTGCATGTGAA+CGG | 0.551684 | 3_2:+82702572 | None:intergenic |
ACTTCTGTAGATAACATATC+GGG | 0.551854 | 3_2:-82697352 | Msa0430830:intron |
TGACAATGAATAGGAAAGCA+AGG | 0.552373 | 3_2:-82700035 | Msa0430830:three_prime_UTR |
CAAATTCCACATCAGAGCAT+TGG | 0.558546 | 3_2:-82702411 | Msa0430830:CDS |
AGCCAGGCAGAAGCGTGAAG+GGG | 0.558774 | 3_2:-82699527 | Msa0430830:three_prime_UTR |
CCACAATCCCTTTCATAAGC+CGG | 0.559179 | 3_2:+82703021 | None:intergenic |
ATGCAGTTGTGCCAATGCAT+GGG | 0.559800 | 3_2:+82702788 | None:intergenic |
GACTCACCTTGGAGGAGGAG+GGG | 0.560269 | 3_2:+82700924 | None:intergenic |
GGAAGCGGAGGTCGAGACAA+AGG | 0.561164 | 3_2:+82704260 | None:intergenic |
TTCTTTAGCATCCACTAGCA+TGG | 0.561413 | 3_2:-82702073 | Msa0430830:CDS |
GCTCTCAGATTTGTGAGAAG+GGG | 0.561945 | 3_2:-82704221 | Msa0430830:five_prime_UTR |
CCACTGCCTCCATATGTCGA+TGG | 0.565191 | 3_2:+82702522 | None:intergenic |
AATACTATGACTCACCTTGG+AGG | 0.566673 | 3_2:+82700916 | None:intergenic |
TGACGGAACCACCGTCCTCA+AGG | 0.566756 | 3_2:-82704298 | Msa0430830:five_prime_UTR |
AGCTCGTAGCATCTCTGTGA+AGG | 0.567233 | 3_2:-82698053 | Msa0430830:three_prime_UTR |
AGAGCAACCTTCTTCCGAAA+CGG | 0.567565 | 3_2:-82703608 | Msa0430830:CDS |
AAACAGGTAAAGTCTGGCGT+TGG | 0.568838 | 3_2:+82703482 | None:intergenic |
GAGTGTGGCTTGAAAGGCAT+GGG | 0.570129 | 3_2:-82700368 | Msa0430830:three_prime_UTR |
TTGTAACTTACAGAGACAGT+TGG | 0.570686 | 3_2:+82701985 | None:intergenic |
ATTGATTCCCCAACTTCCCA+AGG | 0.571713 | 3_2:-82703251 | Msa0430830:CDS |
AGAGCAGCGAATCGGTGCCG+TGG | 0.572019 | 3_2:+82704239 | None:intergenic |
GTTCCACTGGAAGTAACAGT+TGG | 0.572792 | 3_2:+82702825 | None:intergenic |
TGACTCACCTTGGAGGAGGA+GGG | 0.573210 | 3_2:+82700923 | None:intergenic |
CATCAATCAAGGCACTGTAA+AGG | 0.575497 | 3_2:-82702112 | Msa0430830:CDS |
ATATCCATAGTTGAATAGGT+TGG | 0.576764 | 3_2:+82702696 | None:intergenic |
GCTGCTTTGAATCGAGACAT+TGG | 0.579443 | 3_2:-82703868 | Msa0430830:CDS |
TCTTGTATCGGATGCATGAG+AGG | 0.581093 | 3_2:-82697982 | Msa0430830:three_prime_UTR |
TCTTGTTGCCAACAGCGGCT+AGG | 0.582888 | 3_2:-82698117 | Msa0430830:intron |
GCAGCCCGAGCTGCTGTTGG+GGG | 0.585228 | 3_2:-82699589 | Msa0430830:three_prime_UTR |
AGGTTGGCTCACTCTTCACT+TGG | 0.586167 | 3_2:+82702712 | None:intergenic |
GAAGCGGAGGTCGAGACAAA+GGG | 0.586256 | 3_2:+82704261 | None:intergenic |
GGCTTATGAAAGGGATTGTG+GGG | 0.586396 | 3_2:-82703019 | Msa0430830:CDS |
AGATCCGCCGTTCACATGCA+AGG | 0.588053 | 3_2:-82702579 | Msa0430830:CDS |
ATGCCAACTGTTACTTCCAG+TGG | 0.588289 | 3_2:-82702828 | Msa0430830:CDS |
GGGAAGTAGATGACAAAATG+AGG | 0.590649 | 3_2:-82699630 | Msa0430830:three_prime_UTR |
CATGCCTTTCAAGCCACACT+CGG | 0.591412 | 3_2:+82700370 | None:intergenic |
AAAACCACATGGACCTGTCG+TGG | 0.594946 | 3_2:-82703581 | Msa0430830:CDS |
AAGAGTTGTCCAAGAAGAGG+AGG | 0.596851 | 3_2:-82700571 | Msa0430830:CDS |
GGTTTCTTCTGGCCAAGAGG+AGG | 0.597345 | 3_2:+82700967 | None:intergenic |
TCGAGAAAGTGAGTCCATCA+TGG | 0.597496 | 3_2:+82697133 | None:intergenic |
TCGAAGAGTTGTCCAAGAAG+AGG | 0.598509 | 3_2:-82700574 | Msa0430830:CDS |
AATCGGTGCCGTGGAAGCGG+AGG | 0.599424 | 3_2:+82704248 | None:intergenic |
TGTGAGGCAACATTCTGTAT+CGG | 0.599712 | 3_2:+82703556 | None:intergenic |
ACTATGACTCACCTTGGAGG+AGG | 0.599837 | 3_2:+82700919 | None:intergenic |
AGTGATGATTTGGACATCTG+AGG | 0.600102 | 3_2:+82698004 | None:intergenic |
ATGTAATTGCAGTCTTGGAG+AGG | 0.600412 | 3_2:-82698030 | Msa0430830:three_prime_UTR |
GCTTTGAATCGAGACATTGG+CGG | 0.603368 | 3_2:-82703865 | Msa0430830:CDS |
TGTGGAAAGATGCTTGTCAC+TGG | 0.604950 | 3_2:-82700339 | Msa0430830:intron |
ACAGCAATAGAACTGGATGT+TGG | 0.608628 | 3_2:+82702618 | None:intergenic |
GAAAGATGACGAGGAACTAG+TGG | 0.609193 | 3_2:+82702470 | None:intergenic |
TGTCTCGATTCAAAGCAGCT+TGG | 0.610765 | 3_2:+82703872 | None:intergenic |
TCCCCAACTTCCCAAGGACA+GGG | 0.611720 | 3_2:-82703245 | Msa0430830:CDS |
GACAATGAATAGGAAAGCAA+GGG | 0.612242 | 3_2:-82700034 | Msa0430830:three_prime_UTR |
ATGTGTGAATCATGAGGATG+AGG | 0.613072 | 3_2:+82702438 | None:intergenic |
GAGGACAAATGCTGCAAATG+TGG | 0.613322 | 3_2:-82699611 | Msa0430830:three_prime_UTR |
TAATGCATTGTAGGTGAACA+GGG | 0.617187 | 3_2:-82699650 | Msa0430830:intron |
AACAGCTATAAGGTTTACAT+AGG | 0.617578 | 3_2:+82700416 | None:intergenic |
TCGACATATGGAGGCAGTGG+TGG | 0.618314 | 3_2:-82702519 | Msa0430830:CDS |
CGGGATGGTGATATGCATCA+GGG | 0.619936 | 3_2:-82697333 | Msa0430830:three_prime_UTR |
TGTTGTATGTGCCATGCTAG+TGG | 0.619948 | 3_2:+82702062 | None:intergenic |
TGGTTGTCGTGACTCGAAGT+CGG | 0.622100 | 3_2:+82703673 | None:intergenic |
TGTAATTGCAGTCTTGGAGA+GGG | 0.622189 | 3_2:-82698029 | Msa0430830:three_prime_UTR |
AGTGGTTTCTTCTGGCCAAG+AGG | 0.622436 | 3_2:+82700964 | None:intergenic |
CAGAAAGGGAACCAAGAGAA+CGG | 0.623251 | 3_2:+82704090 | None:intergenic |
TACCTGCGTCAGAATCAGAA+AGG | 0.624319 | 3_2:+82703824 | None:intergenic |
CAGTGGAAGCTCCTTGAGGA+CGG | 0.625702 | 3_2:+82704287 | None:intergenic |
ACTTATCTAGATATGTACTT+GGG | 0.625908 | 3_2:-82700439 | Msa0430830:three_prime_UTR |
TTCCGGAGTTGATGGTGACA+AGG | 0.629596 | 3_2:-82699770 | Msa0430830:three_prime_UTR |
CATTTCCCATCGACATATGG+AGG | 0.629878 | 3_2:-82702528 | Msa0430830:CDS |
CAGGGTTTAGGATAACTTCG+CGG | 0.631806 | 3_2:+82704319 | None:intergenic |
GGTGACAAGGAGAAAGATGA+GGG | 0.632650 | 3_2:-82699757 | Msa0430830:three_prime_UTR |
TTTAGACCAATGCTCTGATG+TGG | 0.636526 | 3_2:+82702405 | None:intergenic |
ACTCGGTTGTTCATTGACCG+AGG | 0.640052 | 3_2:+82703324 | None:intergenic |
AGCATTGGTCTAAATCACTT+AGG | 0.640112 | 3_2:-82702396 | Msa0430830:CDS |
GAGATGACATGCTGTCAAAG+TGG | 0.640207 | 3_2:-82699567 | Msa0430830:three_prime_UTR |
TGGTGACAAGGAGAAAGATG+AGG | 0.641020 | 3_2:-82699758 | Msa0430830:three_prime_UTR |
GTCGAGACAAAGGGAAACAG+TGG | 0.643365 | 3_2:+82704270 | None:intergenic |
GGGTCGTAATAAAGCAACAA+AGG | 0.644402 | 3_2:-82699737 | Msa0430830:intron |
CCAGGCAGAAGCGTGAAGGG+GGG | 0.644805 | 3_2:-82699525 | Msa0430830:three_prime_UTR |
AATCTTCACCATCATCAGGA+AGG | 0.645878 | 3_2:-82699456 | Msa0430830:three_prime_UTR |
ATCCTCATGATTCACACATG+AGG | 0.646639 | 3_2:-82702434 | Msa0430830:CDS |
CTGTAGATAACATATCGGGA+TGG | 0.651021 | 3_2:-82697348 | Msa0430830:intron |
AACAGTTGGCATCCTTACAG+GGG | 0.656796 | 3_2:+82702839 | None:intergenic |
CGAGTGTGGCTTGAAAGGCA+TGG | 0.656819 | 3_2:-82700369 | Msa0430830:three_prime_UTR |
GAAGAACCAAGTGCCTCAAG+TGG | 0.657729 | 3_2:+82700946 | None:intergenic |
GAAAGGCATGGGTAATGATG+TGG | 0.658786 | 3_2:-82700357 | Msa0430830:three_prime_UTR |
TGCAGTTGTGCCAATGCATG+GGG | 0.662938 | 3_2:+82702789 | None:intergenic |
ACTCGAACATCATGTTCCTG+AGG | 0.664605 | 3_2:+82702660 | None:intergenic |
AAAGCTTCTCGAAGACGATG+AGG | 0.666719 | 3_2:-82703932 | Msa0430830:CDS |
ATGTTGGCAGTGACCGAGTG+TGG | 0.669170 | 3_2:-82700383 | Msa0430830:three_prime_UTR |
TGGCCAGAAGAAACCACTTG+AGG | 0.672577 | 3_2:-82700959 | Msa0430830:CDS |
GAAACAGTGGAAGCTCCTTG+AGG | 0.674497 | 3_2:+82704283 | None:intergenic |
AAGATTACTTGCATCCTGTG+AGG | 0.677122 | 3_2:+82703540 | None:intergenic |
ACAGTCGACACAGATCCACC+TGG | 0.678732 | 3_2:+82702333 | None:intergenic |
GAAACGGAGCTAAAACCACA+TGG | 0.687322 | 3_2:-82703592 | Msa0430830:CDS |
AATTAATGTTCAGTGTGTGG+AGG | 0.687983 | 3_2:-82700253 | Msa0430830:intron |
TGACTCGAAGTCGGCCACGT+TGG | 0.691017 | 3_2:+82703682 | None:intergenic |
ACAGTTGGCATCCTTACAGG+GGG | 0.692028 | 3_2:+82702840 | None:intergenic |
GAAGTTATCCTAAACCCTGA+CGG | 0.692113 | 3_2:-82704315 | Msa0430830:five_prime_UTR |
TTGTGGTCTGAAAGATGACG+AGG | 0.696332 | 3_2:+82702461 | None:intergenic |
AGGTGGATCTGTGTCGACTG+TGG | 0.697165 | 3_2:-82702331 | Msa0430830:CDS |
TGGAAGCTCCTTGAGGACGG+TGG | 0.700442 | 3_2:+82704290 | None:intergenic |
TGTGTGGAGGAAAGAATGCG+TGG | 0.701022 | 3_2:-82700240 | Msa0430830:three_prime_UTR |
AAGGCCTTGCATGTGAACGG+CGG | 0.702296 | 3_2:+82702575 | None:intergenic |
GGTTCCACGACAGGTCCATG+TGG | 0.713859 | 3_2:+82703577 | None:intergenic |
TGCCTCATGTGTGAATCATG+AGG | 0.714630 | 3_2:+82702432 | None:intergenic |
ATATTGAGAAAACAAGACAT+CGG | 0.724469 | 3_2:-82700092 | Msa0430830:three_prime_UTR |
GCTTATGAAAGGGATTGTGG+GGG | 0.734401 | 3_2:-82703018 | Msa0430830:CDS |
GATCCTAAGAGAATGCCAGG+TGG | 0.746632 | 3_2:-82702348 | Msa0430830:CDS |
TCGGTCAATGAACAACCGAG+TGG | 0.755898 | 3_2:-82703322 | Msa0430830:CDS |
TCAGTCAATCATTACCAACG+TGG | 0.781874 | 3_2:-82703696 | Msa0430830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCATATTACTAAAAATTT+TGG | - | chr3_2:82698278-82698297 | Msa0430830:intron | 10.0% |
!! | TATTAAGATATCATTAAAAA+CGG | + | chr3_2:82700289-82700308 | None:intergenic | 10.0% |
!! | TAAATATAAATAACTAAATG+TGG | - | chr3_2:82702976-82702995 | Msa0430830:intron | 10.0% |
!!! | ATTGCTTCATTTTTTTTTTA+AGG | - | chr3_2:82697648-82697667 | Msa0430830:intron | 15.0% |
!!! | AACTTTATTTAACAAATTGA+AGG | - | chr3_2:82698172-82698191 | Msa0430830:intron | 15.0% |
!! | TATATTATCAGATCTAAATA+GGG | - | chr3_2:82699908-82699927 | Msa0430830:intron | 15.0% |
!! | TGTAACAAATATTGAAATAT+GGG | + | chr3_2:82701078-82701097 | None:intergenic | 15.0% |
!! | TTGTAACAAATATTGAAATA+TGG | + | chr3_2:82701079-82701098 | None:intergenic | 15.0% |
!! | AAATTTACAAATTGACATAA+AGG | + | chr3_2:82701235-82701254 | None:intergenic | 15.0% |
!! | ACTTACTAAATTTGAATATT+AGG | + | chr3_2:82702191-82702210 | None:intergenic | 15.0% |
!!! | ATATTTTATTTTACCTCATT+CGG | + | chr3_2:82703444-82703463 | None:intergenic | 15.0% |
!! | AAAAGAAAACAAATAATTTC+AGG | + | chr3_2:82704112-82704131 | None:intergenic | 15.0% |
!! | ATAAATATAAATCACAACAG+AGG | + | chr3_2:82697359-82697378 | None:intergenic | 20.0% |
!! | TGAATGTGATTAAGAATTTA+TGG | + | chr3_2:82697611-82697630 | None:intergenic | 20.0% |
!! | TTTATTTAACAAATTGAAGG+TGG | - | chr3_2:82698175-82698194 | Msa0430830:intron | 20.0% |
!! | TTATTTAACAAATTGAAGGT+GGG | - | chr3_2:82698176-82698195 | Msa0430830:intron | 20.0% |
!!! | AGAATAGATGTTTTTTCTTA+AGG | - | chr3_2:82698433-82698452 | Msa0430830:intron | 20.0% |
!! | ATGAAACAAAAAAGAACATT+TGG | + | chr3_2:82699484-82699503 | None:intergenic | 20.0% |
!!! | AAATGTTCTTTTTTGTTTCA+TGG | - | chr3_2:82699483-82699502 | Msa0430830:three_prime_UTR | 20.0% |
!! | TTCACAAAATTATAACGATA+GGG | + | chr3_2:82699569-82699588 | None:intergenic | 20.0% |
!! | TTTCACAAAATTATAACGAT+AGG | + | chr3_2:82699570-82699589 | None:intergenic | 20.0% |
!! | AAAGAAAACAAAACAAGAAA+AGG | + | chr3_2:82699644-82699663 | None:intergenic | 20.0% |
!!! | TTTTTGTTCTTTTGATTTAG+AGG | - | chr3_2:82699662-82699681 | Msa0430830:intron | 20.0% |
!! | AATAATCAAGAGTCAATTTA+TGG | - | chr3_2:82699882-82699901 | Msa0430830:intron | 20.0% |
!! | CTATATTATCAGATCTAAAT+AGG | - | chr3_2:82699907-82699926 | Msa0430830:intron | 20.0% |
!! | CTAACCTAATAAAATTGAAA+AGG | + | chr3_2:82700339-82700358 | None:intergenic | 20.0% |
!!! | CTTGTTCATTTTTTTTTTCT+GGG | - | chr3_2:82700491-82700510 | Msa0430830:three_prime_UTR | 20.0% |
!!! | CTTTTCTGTTTTAAAATTTC+AGG | - | chr3_2:82700700-82700719 | Msa0430830:intron | 20.0% |
!!! | TTTTTGTGTTCTCTTTTTAT+AGG | - | chr3_2:82700726-82700745 | Msa0430830:intron | 20.0% |
!!! | TTTCAATATTTGTTACAAGT+AGG | - | chr3_2:82701081-82701100 | Msa0430830:intron | 20.0% |
!!! | GGAATTTAATTTTTGTATAG+TGG | - | chr3_2:82701447-82701466 | Msa0430830:intron | 20.0% |
!!! | TAATGCTATTTTTTGAGTAT+AGG | - | chr3_2:82701578-82701597 | Msa0430830:intron | 20.0% |
!! | TAAGTTAGTTCAATATATAC+TGG | + | chr3_2:82702329-82702348 | None:intergenic | 20.0% |
!!! | AACTAACTTATAAGTTGTTT+TGG | - | chr3_2:82702339-82702358 | Msa0430830:CDS | 20.0% |
!! | AAAAAATTGAGGAAGAAAAT+TGG | - | chr3_2:82702883-82702902 | Msa0430830:intron | 20.0% |
!! | AAACTGTTGTTAAACAAAAA+AGG | + | chr3_2:82703015-82703034 | None:intergenic | 20.0% |
!! | ATGAGGTAAAATAAAATATC+TGG | - | chr3_2:82703445-82703464 | Msa0430830:CDS | 20.0% |
!! | TGAGGTAAAATAAAATATCT+GGG | - | chr3_2:82703446-82703465 | Msa0430830:CDS | 20.0% |
!!! | GTTTTCTTTATAATATAACC+TGG | - | chr3_2:82703660-82703679 | Msa0430830:CDS | 20.0% |
!! | AAATATAATTGGAAATATCC+AGG | + | chr3_2:82703681-82703700 | None:intergenic | 20.0% |
!! | TGGATATTTCCAATTATATT+TGG | - | chr3_2:82703680-82703699 | Msa0430830:CDS | 20.0% |
!! | TTTCCAATTATATTTGGATT+TGG | - | chr3_2:82703686-82703705 | Msa0430830:CDS | 20.0% |
!!! | TAATTTCTTTGAAGCTAATT+AGG | + | chr3_2:82703720-82703739 | None:intergenic | 20.0% |
! | AAATTCTGAATTGCAGAAAA+CGG | - | chr3_2:82697400-82697419 | Msa0430830:intron | 25.0% |
! | TTAATCACATTCATACATAG+TGG | - | chr3_2:82697618-82697637 | Msa0430830:intron | 25.0% |
!!! | ATAGATGTTTTTTCTTAAGG+TGG | - | chr3_2:82698436-82698455 | Msa0430830:intron | 25.0% |
!! | ATCATTAAATTTTGTTCCAC+TGG | + | chr3_2:82698572-82698591 | None:intergenic | 25.0% |
!!! | CTTTTTTACATATGAAGTAG+AGG | + | chr3_2:82699148-82699167 | None:intergenic | 25.0% |
! | CTCTACTTCATATGTAAAAA+AGG | - | chr3_2:82699146-82699165 | Msa0430830:intron | 25.0% |
! | ATCATTTATCTAAGTTGCAT+GGG | - | chr3_2:82699205-82699224 | Msa0430830:intron | 25.0% |
!! | TATTTGATCCCCAAAATTTT+AGG | + | chr3_2:82699457-82699476 | None:intergenic | 25.0% |
! | TCACAAAATTATAACGATAG+GGG | + | chr3_2:82699568-82699587 | None:intergenic | 25.0% |
! | GTTACTCTCTATTAAAGAAT+AGG | + | chr3_2:82700118-82700137 | None:intergenic | 25.0% |
!! | CTTTAAAAAGTAGCATGAAA+TGG | + | chr3_2:82700165-82700184 | None:intergenic | 25.0% |
!!! | ATGCTACTTTTTAAAGCATT+TGG | - | chr3_2:82700169-82700188 | Msa0430830:intron | 25.0% |
! | ACCTAATAAAATTGAAAAGG+AGG | + | chr3_2:82700336-82700355 | None:intergenic | 25.0% |
!!! | GCTTGTTCATTTTTTTTTTC+TGG | - | chr3_2:82700490-82700509 | Msa0430830:three_prime_UTR | 25.0% |
! | ATATTGAAGAAAACCATAGT+TGG | - | chr3_2:82700668-82700687 | Msa0430830:intron | 25.0% |
! | TATTGAAGAAAACCATAGTT+GGG | - | chr3_2:82700669-82700688 | Msa0430830:intron | 25.0% |
! | ATCTAGATAAGTTTGAAGAA+TGG | + | chr3_2:82700934-82700953 | None:intergenic | 25.0% |
! | AACTTATCTAGATATGTACT+TGG | - | chr3_2:82700941-82700960 | Msa0430830:CDS | 25.0% |
! | ACTTATCTAGATATGTACTT+GGG | - | chr3_2:82700942-82700961 | Msa0430830:CDS | 25.0% |
! | CATAATTAGAATGTCAAAAC+AGG | - | chr3_2:82701176-82701195 | Msa0430830:intron | 25.0% |
! | ATATTGAGAAAACAAGACAT+CGG | - | chr3_2:82701289-82701308 | Msa0430830:intron | 25.0% |
!!! | GTTTTAAATGATAAGCACAT+AGG | + | chr3_2:82701554-82701573 | None:intergenic | 25.0% |
!!! | TATTTTTTGAGTATAGGTAG+AGG | - | chr3_2:82701584-82701603 | Msa0430830:intron | 25.0% |
!!! | ATTTTTTGAGTATAGGTAGA+GGG | - | chr3_2:82701585-82701604 | Msa0430830:intron | 25.0% |
! | ATGACTTTCCACATATATAA+AGG | + | chr3_2:82701700-82701719 | None:intergenic | 25.0% |
!!! | TTTTATTGGTAATGCATTGT+AGG | - | chr3_2:82701722-82701741 | Msa0430830:intron | 25.0% |
! | CACAAAAGATAATCAAGAAA+AGG | - | chr3_2:82701950-82701969 | Msa0430830:intron | 25.0% |
! | TATATTCAAACTAGTTAGTC+AGG | - | chr3_2:82702081-82702100 | Msa0430830:CDS | 25.0% |
!!! | CAATATATACTGGTTGATTT+TGG | + | chr3_2:82702319-82702338 | None:intergenic | 25.0% |
! | GTGCTGTGATATTTATAATA+GGG | + | chr3_2:82702592-82702611 | None:intergenic | 25.0% |
! | TGTGCTGTGATATTTATAAT+AGG | + | chr3_2:82702593-82702612 | None:intergenic | 25.0% |
!!! | CTTTTTTAAACACTTGCATT+CGG | - | chr3_2:82702707-82702726 | Msa0430830:CDS | 25.0% |
! | AATTGCAAAATAGATTCTTG+AGG | - | chr3_2:82702857-82702876 | Msa0430830:CDS | 25.0% |
! | GTGATGATCAATTGTATAAA+TGG | - | chr3_2:82702910-82702929 | Msa0430830:intron | 25.0% |
!!! | GCTCTTGTTAATATGTTTTT+TGG | - | chr3_2:82702944-82702963 | Msa0430830:intron | 25.0% |
!! | AAGACTTTTTATGCATGTTT+AGG | + | chr3_2:82703117-82703136 | None:intergenic | 25.0% |
! | GATTGATCAATGACATTAAT+TGG | - | chr3_2:82703615-82703634 | Msa0430830:CDS | 25.0% |
!! | TTTGAAGCTAATTAGGAAAT+GGG | + | chr3_2:82703713-82703732 | None:intergenic | 25.0% |
!! | TTTTGACAGTGAAATTAAGA+TGG | + | chr3_2:82703895-82703914 | None:intergenic | 25.0% |
! | AACTTCTGTAGATAACATAT+CGG | - | chr3_2:82704028-82704047 | Msa0430830:intron | 25.0% |
! | TTGAACATTGATGTTATTGT+AGG | - | chr3_2:82704161-82704180 | Msa0430830:five_prime_UTR | 25.0% |
! | CATTAGTACAAGAAAAAAGT+TGG | + | chr3_2:82704197-82704216 | None:intergenic | 25.0% |
GGGGACAATATATATAAGAA+AGG | - | chr3_2:82697193-82697212 | Msa0430830:three_prime_UTR | 30.0% | |
!!! | TCTTGCTGTTGTTCAATTTT+AGG | + | chr3_2:82697756-82697775 | None:intergenic | 30.0% |
ATTGCCTCGTTGTTAAAAAT+GGG | + | chr3_2:82697972-82697991 | None:intergenic | 30.0% | |
CAAACTTTAGTAGTTTAGCA+CGG | + | chr3_2:82698245-82698264 | None:intergenic | 30.0% | |
! | TACCTAAAGAACATTTTGTC+CGG | - | chr3_2:82698341-82698360 | Msa0430830:intron | 30.0% |
! | ATTAACAAAAGTGCAACAAC+AGG | - | chr3_2:82698405-82698424 | Msa0430830:intron | 30.0% |
ATATCCATAGTTGAATAGGT+TGG | + | chr3_2:82698688-82698707 | None:intergenic | 30.0% | |
ACTGATATCCATAGTTGAAT+AGG | + | chr3_2:82698692-82698711 | None:intergenic | 30.0% | |
! | TTTGCCAAGAATTTGAAGTT+TGG | + | chr3_2:82699095-82699114 | None:intergenic | 30.0% |
AACATCAGCAGAACAAAATT+CGG | - | chr3_2:82699113-82699132 | Msa0430830:intron | 30.0% | |
CATCATTTATCTAAGTTGCA+TGG | - | chr3_2:82699204-82699223 | Msa0430830:intron | 30.0% | |
! | TTTTGACCAGAATTAACAGA+AGG | + | chr3_2:82699234-82699253 | None:intergenic | 30.0% |
TAATTCTGGTCAAAATGAAC+AGG | - | chr3_2:82699239-82699258 | Msa0430830:intron | 30.0% | |
AATTCTGGTCAAAATGAACA+GGG | - | chr3_2:82699240-82699259 | Msa0430830:intron | 30.0% | |
!! | GTAAAGGATGAATTTTCAAG+AGG | - | chr3_2:82699285-82699304 | Msa0430830:intron | 30.0% |
! | AGAAGTAGTGCCTAAAATTT+TGG | - | chr3_2:82699444-82699463 | Msa0430830:three_prime_UTR | 30.0% |
! | GAAGTAGTGCCTAAAATTTT+GGG | - | chr3_2:82699445-82699464 | Msa0430830:three_prime_UTR | 30.0% |
! | AAGTAGTGCCTAAAATTTTG+GGG | - | chr3_2:82699446-82699465 | Msa0430830:three_prime_UTR | 30.0% |
CAAGCAGATTAATACTGTTT+GGG | + | chr3_2:82699525-82699544 | None:intergenic | 30.0% | |
TCAAGCAGATTAATACTGTT+TGG | + | chr3_2:82699526-82699545 | None:intergenic | 30.0% | |
CACAAAATTATAACGATAGG+GGG | + | chr3_2:82699567-82699586 | None:intergenic | 30.0% | |
!! | GATTAGTTTCAATCAGTTCT+TGG | + | chr3_2:82699844-82699863 | None:intergenic | 30.0% |
! | CAAGCCTATAATTTTACGTT+AGG | - | chr3_2:82700137-82700156 | Msa0430830:intron | 30.0% |
GGAACCTAACGTAAAATTAT+AGG | + | chr3_2:82700144-82700163 | None:intergenic | 30.0% | |
! | GCCTCCTTTTCAATTTTATT+AGG | - | chr3_2:82700332-82700351 | Msa0430830:intron | 30.0% |
ATCCTACAGTAAGAAACAAA+AGG | - | chr3_2:82700562-82700581 | Msa0430830:CDS | 30.0% | |
TGATCAGCTTAATGATGTTA+CGG | - | chr3_2:82700607-82700626 | Msa0430830:CDS | 30.0% | |
! | TTGTGTTCTCTTTTTATAGG+AGG | - | chr3_2:82700729-82700748 | Msa0430830:intron | 30.0% |
!! | AGGAAGAACAGTTATTTTCT+GGG | - | chr3_2:82700752-82700771 | Msa0430830:CDS | 30.0% |
! | TCAATCAATTTTCTCTGCAA+TGG | + | chr3_2:82700859-82700878 | None:intergenic | 30.0% |
GACAGAGTAATGACATAAAT+AGG | + | chr3_2:82700893-82700912 | None:intergenic | 30.0% | |
ATGGCAAAAACAAAATCAGA+TGG | + | chr3_2:82700915-82700934 | None:intergenic | 30.0% | |
AACAGCTATAAGGTTTACAT+AGG | + | chr3_2:82700968-82700987 | None:intergenic | 30.0% | |
GACAAAATACAACAGCTATA+AGG | + | chr3_2:82700978-82700997 | None:intergenic | 30.0% | |
TAGGATTCCATGTAATCTAA+CGG | - | chr3_2:82701100-82701119 | Msa0430830:intron | 30.0% | |
GAAAATTAATGTTCAGTGTG+TGG | - | chr3_2:82701125-82701144 | Msa0430830:intron | 30.0% | |
AGCAAATCATGACAATGAAT+AGG | - | chr3_2:82701337-82701356 | Msa0430830:intron | 30.0% | |
GCAATTCACCTTTATATATG+TGG | - | chr3_2:82701689-82701708 | Msa0430830:intron | 30.0% | |
!! | GTGGAAAGTCATGTTTTTAT+TGG | - | chr3_2:82701708-82701727 | Msa0430830:intron | 30.0% |
AATCAAGAAAAGGAGAGAAA+AGG | - | chr3_2:82701960-82701979 | Msa0430830:intron | 30.0% | |
CAGAAAAGAAAAAACAACAC+TGG | - | chr3_2:82702438-82702457 | Msa0430830:CDS | 30.0% | |
!!! | AATATGTTTTTTGGCTCAAG+TGG | - | chr3_2:82702953-82702972 | Msa0430830:intron | 30.0% |
AATAAAACTTTATAGCCCCA+TGG | - | chr3_2:82703156-82703175 | Msa0430830:intron | 30.0% | |
CACACATATTGTATTGTATC+TGG | + | chr3_2:82703185-82703204 | None:intergenic | 30.0% | |
TTTGGGAAAAATCATTCTCA+TGG | - | chr3_2:82703290-82703309 | Msa0430830:CDS | 30.0% | |
!!! | TTTATTTTACCTCATTCGGT+TGG | + | chr3_2:82703440-82703459 | None:intergenic | 30.0% |
AGCACAATGGTAATATAAAC+AGG | + | chr3_2:82703481-82703500 | None:intergenic | 30.0% | |
GGACCAAATCCAAATATAAT+TGG | + | chr3_2:82703692-82703711 | None:intergenic | 30.0% | |
!! | CTTTGAAGCTAATTAGGAAA+TGG | + | chr3_2:82703714-82703733 | None:intergenic | 30.0% |
TCTTGTATGCATTTCACTAT+AGG | - | chr3_2:82703769-82703788 | Msa0430830:intron | 30.0% | |
CTTGTATGCATTTCACTATA+GGG | - | chr3_2:82703770-82703789 | Msa0430830:intron | 30.0% | |
TGTTTCAATCTCCAAATGTT+TGG | - | chr3_2:82703958-82703977 | Msa0430830:exon | 30.0% | |
ATGTTATCTACAGAAGTTTG+AGG | + | chr3_2:82704026-82704045 | None:intergenic | 30.0% | |
ACTTCTGTAGATAACATATC+GGG | - | chr3_2:82704029-82704048 | Msa0430830:intron | 30.0% | |
AAGAAAAAAGTTGGAAAAGC+AGG | + | chr3_2:82704188-82704207 | None:intergenic | 30.0% | |
TTCTTGTACTAATGAAGAAC+CGG | - | chr3_2:82704203-82704222 | Msa0430830:five_prime_UTR | 30.0% | |
! | AACACAGTAAAGTTTGAAAC+CGG | + | chr3_2:82704225-82704244 | None:intergenic | 30.0% |
ACATTTCTATGTTTGAATGC+AGG | + | chr3_2:82704298-82704317 | None:intergenic | 30.0% | |
ATAAATCACAACAGAGGAAC+AGG | + | chr3_2:82697353-82697372 | None:intergenic | 35.0% | |
CGAGAAGCTTTACTATAGAT+GGG | + | chr3_2:82697440-82697459 | None:intergenic | 35.0% | |
TCGAGAAGCTTTACTATAGA+TGG | + | chr3_2:82697441-82697460 | None:intergenic | 35.0% | |
! | TGAGATTGTTGATGAGAAAC+AGG | + | chr3_2:82697918-82697937 | None:intergenic | 35.0% |
!! | AGATCCCATTTTTAACAACG+AGG | - | chr3_2:82697965-82697984 | Msa0430830:three_prime_UTR | 35.0% |
GATTGCCTCGTTGTTAAAAA+TGG | + | chr3_2:82697973-82697992 | None:intergenic | 35.0% | |
GCATACTGAGATTGTTCATT+GGG | + | chr3_2:82698008-82698027 | None:intergenic | 35.0% | |
TGCATACTGAGATTGTTCAT+TGG | + | chr3_2:82698009-82698028 | None:intergenic | 35.0% | |
GAAGTTGGGGAATCAATATA+GGG | + | chr3_2:82698127-82698146 | None:intergenic | 35.0% | |
! | AAAGGACATGATAGTGAAAC+TGG | + | chr3_2:82698211-82698230 | None:intergenic | 35.0% |
!! | CTACTAAAGTTTGTTGTGCA+AGG | - | chr3_2:82698252-82698271 | Msa0430830:intron | 35.0% |
! | ATTTTGTCCGGCTTATGAAA+GGG | - | chr3_2:82698353-82698372 | Msa0430830:intron | 35.0% |
TTTGTCTGCAAGAAAAAGGA+CGG | + | chr3_2:82698493-82698512 | None:intergenic | 35.0% | |
! | GGTTTTTGTCTGCAAGAAAA+AGG | + | chr3_2:82698497-82698516 | None:intergenic | 35.0% |
TTGCAGACAAAAACCAATAC+AGG | - | chr3_2:82698502-82698521 | Msa0430830:intron | 35.0% | |
AAAACCAATACAGGTTCTTC+TGG | - | chr3_2:82698511-82698530 | Msa0430830:intron | 35.0% | |
ATTTAATGATCCCCATGCAT+TGG | - | chr3_2:82698582-82698601 | Msa0430830:intron | 35.0% | |
!! | CTGAAGAAGCATTATGAGAA+TGG | + | chr3_2:82698645-82698664 | None:intergenic | 35.0% |
TATCAGTGCTAAAAAACCTC+AGG | - | chr3_2:82698705-82698724 | Msa0430830:intron | 35.0% | |
TTGACTAACAGCAATAGAAC+TGG | + | chr3_2:82698773-82698792 | None:intergenic | 35.0% | |
ATACATTTCCCATCGACATA+TGG | - | chr3_2:82698850-82698869 | Msa0430830:intron | 35.0% | |
!! | AGCATTGGTCTAAATCACTT+AGG | - | chr3_2:82698985-82699004 | Msa0430830:intron | 35.0% |
CACACCAAACTTCAAATTCT+TGG | - | chr3_2:82699088-82699107 | Msa0430830:intron | 35.0% | |
ACATCAGCAGAACAAAATTC+GGG | - | chr3_2:82699114-82699133 | Msa0430830:intron | 35.0% | |
TGCTCAATAGAAAGGTCATT+AGG | + | chr3_2:82699174-82699193 | None:intergenic | 35.0% | |
TATGTTGCTGCTCAATAGAA+AGG | + | chr3_2:82699182-82699201 | None:intergenic | 35.0% | |
ATCTGGTTGAGATGCAAAAT+GGG | + | chr3_2:82699376-82699395 | None:intergenic | 35.0% | |
TTGTAACTTACAGAGACAGT+TGG | + | chr3_2:82699399-82699418 | None:intergenic | 35.0% | |
!! | AAGACGTCTTTTTGAGAGAT+TGG | - | chr3_2:82699594-82699613 | Msa0430830:three_prime_UTR | 35.0% |
!! | AGACGTCTTTTTGAGAGATT+GGG | - | chr3_2:82699595-82699614 | Msa0430830:three_prime_UTR | 35.0% |
CTAGGATTTGTAGCTTCTAA+CGG | - | chr3_2:82699934-82699953 | Msa0430830:intron | 35.0% | |
TAATACTCTCTCCACATGAA+GGG | + | chr3_2:82699968-82699987 | None:intergenic | 35.0% | |
TTAATACTCTCTCCACATGA+AGG | + | chr3_2:82699969-82699988 | None:intergenic | 35.0% | |
!! | TCATGTGGAGAGAGTATTAA+AGG | - | chr3_2:82699969-82699988 | Msa0430830:intron | 35.0% |
!! | TGGAGAGAGTATTAAAGGAT+AGG | - | chr3_2:82699974-82699993 | Msa0430830:intron | 35.0% |
GGAATCAACTAACTTTCAGT+TGG | + | chr3_2:82700097-82700116 | None:intergenic | 35.0% | |
CAAAATACTATGACTCACCT+TGG | + | chr3_2:82700471-82700490 | None:intergenic | 35.0% | |
!! | CACCTTTTGTTTCTTACTGT+AGG | + | chr3_2:82700567-82700586 | None:intergenic | 35.0% |
TCATTAAGCTGATCAATGCT+TGG | + | chr3_2:82700602-82700621 | None:intergenic | 35.0% | |
!! | TGTTAGTGGTGTTGATCTTA+GGG | - | chr3_2:82700631-82700650 | Msa0430830:CDS | 35.0% |
AAAGTATGTGTTCCCAACTA+TGG | + | chr3_2:82700684-82700703 | None:intergenic | 35.0% | |
! | TGTTCTCTTTTTATAGGAGG+AGG | - | chr3_2:82700732-82700751 | Msa0430830:intron | 35.0% |
!! | GAGGAAGAACAGTTATTTTC+TGG | - | chr3_2:82700751-82700770 | Msa0430830:CDS | 35.0% |
! | GCTGTTGTATTTTGTCATGT+TGG | - | chr3_2:82700982-82701001 | Msa0430830:CDS | 35.0% |
! | TTTTCAGCCGTTAGATTACA+TGG | + | chr3_2:82701110-82701129 | None:intergenic | 35.0% |
AATTAATGTTCAGTGTGTGG+AGG | - | chr3_2:82701128-82701147 | Msa0430830:intron | 35.0% | |
TGACAATGAATAGGAAAGCA+AGG | - | chr3_2:82701346-82701365 | Msa0430830:intron | 35.0% | |
GACAATGAATAGGAAAGCAA+GGG | - | chr3_2:82701347-82701366 | Msa0430830:intron | 35.0% | |
! | AACCCACATCATTTAGTTTC+CGG | + | chr3_2:82701410-82701429 | None:intergenic | 35.0% |
AATTCCACAAAGCGACAAAA+TGG | + | chr3_2:82701433-82701452 | None:intergenic | 35.0% | |
! | TTTTGTCCTTGCACATTTCT+TGG | - | chr3_2:82701485-82701504 | Msa0430830:intron | 35.0% |
TTTGTCCTTGCACATTTCTT+GGG | - | chr3_2:82701486-82701505 | Msa0430830:intron | 35.0% | |
TAATGCATTGTAGGTGAACA+GGG | - | chr3_2:82701731-82701750 | Msa0430830:intron | 35.0% | |
ACACTTTCCTTGCATAAAAG+CGG | - | chr3_2:82702234-82702253 | Msa0430830:intron | 35.0% | |
ACCAAAGTCTGAATGAAACT+AGG | - | chr3_2:82702265-82702284 | Msa0430830:CDS | 35.0% | |
TCCTAGTTTCATTCAGACTT+TGG | + | chr3_2:82702269-82702288 | None:intergenic | 35.0% | |
TCTTGAGGCAGAAAAAATTG+AGG | - | chr3_2:82702872-82702891 | Msa0430830:CDS | 35.0% | |
ACAATGTAATCAGAACATGG+GGG | + | chr3_2:82703212-82703231 | None:intergenic | 35.0% | |
CACAATGTAATCAGAACATG+GGG | + | chr3_2:82703213-82703232 | None:intergenic | 35.0% | |
GCACAATGTAATCAGAACAT+GGG | + | chr3_2:82703214-82703233 | None:intergenic | 35.0% | |
TGCACAATGTAATCAGAACA+TGG | + | chr3_2:82703215-82703234 | None:intergenic | 35.0% | |
CCAAATCATCACTCTTGTAT+CGG | - | chr3_2:82703387-82703406 | Msa0430830:CDS | 35.0% | |
! | TAAGATGAGAGAAAGCACAA+TGG | + | chr3_2:82703494-82703513 | None:intergenic | 35.0% |
GACATTAATTGGTCACAAGT+TGG | - | chr3_2:82703626-82703645 | Msa0430830:CDS | 35.0% | |
CATTTCACTATAGGGTAACA+TGG | - | chr3_2:82703778-82703797 | Msa0430830:intron | 35.0% | |
! | GAAATTTGAGGTTTGAAGCT+GGG | - | chr3_2:82703835-82703854 | Msa0430830:CDS | 35.0% |
! | TTGTTACATGCTGCAGTTTT+TGG | + | chr3_2:82704141-82704160 | None:intergenic | 35.0% |
! | TTTACTGTGTTTTGCCATGA+TGG | - | chr3_2:82704234-82704253 | Msa0430830:five_prime_UTR | 35.0% |
CCTGCATTACTACAAGAAAA+AGG | + | chr3_2:82704274-82704293 | None:intergenic | 35.0% | |
! | CCTTTTTCTTGTAGTAATGC+AGG | - | chr3_2:82704271-82704290 | Msa0430830:five_prime_UTR | 35.0% |
GAAGTTATCCTAAACCCTGA+CGG | - | chr3_2:82697066-82697085 | Msa0430830:three_prime_UTR | 40.0% | |
TGCTCTCAGATTTGTGAGAA+GGG | - | chr3_2:82697159-82697178 | Msa0430830:three_prime_UTR | 40.0% | |
! | AAGGTCTGAACTCTGAAAAG+AGG | - | chr3_2:82697212-82697231 | Msa0430830:three_prime_UTR | 40.0% |
! | GTGACTTTTGTGTGTGTATC+TGG | + | chr3_2:82697266-82697285 | None:intergenic | 40.0% |
CGAAGAATGAGTTGCAGAAA+GGG | + | chr3_2:82697308-82697327 | None:intergenic | 40.0% | |
CCTTTCTGCAACTCATTCTT+CGG | - | chr3_2:82697306-82697325 | Msa0430830:three_prime_UTR | 40.0% | |
CTTTCTGCAACTCATTCTTC+GGG | - | chr3_2:82697307-82697326 | Msa0430830:three_prime_UTR | 40.0% | |
GAGGATGAAACTATGCATTC+AGG | - | chr3_2:82697468-82697487 | Msa0430830:intron | 40.0% | |
TCAGTCAATCATTACCAACG+TGG | - | chr3_2:82697685-82697704 | Msa0430830:intron | 40.0% | |
!!! | ATGTGGTTTTAGCTCCGTTT+CGG | + | chr3_2:82697790-82697809 | None:intergenic | 40.0% |
TGTGAGGCAACATTCTGTAT+CGG | + | chr3_2:82697828-82697847 | None:intergenic | 40.0% | |
AAGATTACTTGCATCCTGTG+AGG | + | chr3_2:82697844-82697863 | None:intergenic | 40.0% | |
GATGAGAAACAGGTAAAGTC+TGG | + | chr3_2:82697908-82697927 | None:intergenic | 40.0% | |
CCTGTTTACTACGATTGACT+TGG | + | chr3_2:82698085-82698104 | None:intergenic | 40.0% | |
CCAAGTCAATCGTAGTAAAC+AGG | - | chr3_2:82698082-82698101 | Msa0430830:three_prime_UTR | 40.0% | |
CGTAGTAAACAGGTACCATT+TGG | - | chr3_2:82698092-82698111 | Msa0430830:three_prime_UTR | 40.0% | |
GGAAGTTGGGGAATCAATAT+AGG | + | chr3_2:82698128-82698147 | None:intergenic | 40.0% | |
AGCCGGACAAAATGTTCTTT+AGG | + | chr3_2:82698346-82698365 | None:intergenic | 40.0% | |
! | CATTTTGTCCGGCTTATGAA+AGG | - | chr3_2:82698352-82698371 | Msa0430830:intron | 40.0% |
! | ACAAAAGTGCAACAACAGGT+AGG | - | chr3_2:82698409-82698428 | Msa0430830:intron | 40.0% |
TAACAGTTGGCATCCTTACA+GGG | + | chr3_2:82698546-82698565 | None:intergenic | 40.0% | |
TGAGCCAACCTATTCAACTA+TGG | - | chr3_2:82698681-82698700 | Msa0430830:intron | 40.0% | |
ACAGCAATAGAACTGGATGT+TGG | + | chr3_2:82698766-82698785 | None:intergenic | 40.0% | |
ATTAAGGCCTTGCATGTGAA+CGG | + | chr3_2:82698812-82698831 | None:intergenic | 40.0% | |
!!! | GGTAACTACAGCCATTTTTC+CGG | - | chr3_2:82698883-82698902 | Msa0430830:intron | 40.0% |
!!! | GTAACTACAGCCATTTTTCC+GGG | - | chr3_2:82698884-82698903 | Msa0430830:intron | 40.0% |
ATGTGTGAATCATGAGGATG+AGG | + | chr3_2:82698946-82698965 | None:intergenic | 40.0% | |
ATCCTCATGATTCACACATG+AGG | - | chr3_2:82698947-82698966 | Msa0430830:intron | 40.0% | |
CAAATTCCACATCAGAGCAT+TGG | - | chr3_2:82698970-82698989 | Msa0430830:intron | 40.0% | |
TTTAGACCAATGCTCTGATG+TGG | + | chr3_2:82698979-82698998 | None:intergenic | 40.0% | |
AATGATCCTAAGAGAATGCC+AGG | - | chr3_2:82699030-82699049 | Msa0430830:intron | 40.0% | |
!! | CATCAATCAAGGCACTGTAA+AGG | - | chr3_2:82699269-82699288 | Msa0430830:intron | 40.0% |
TTCTTTAGCATCCACTAGCA+TGG | - | chr3_2:82699308-82699327 | Msa0430830:intron | 40.0% | |
GCAAAATGGGAAGCAGTATT+TGG | + | chr3_2:82699363-82699382 | None:intergenic | 40.0% | |
GATCTGGTTGAGATGCAAAA+TGG | + | chr3_2:82699377-82699396 | None:intergenic | 40.0% | |
TCAGTCTCTCACAAAACAGT+TGG | - | chr3_2:82700068-82700087 | Msa0430830:three_prime_UTR | 40.0% | |
AAGCCATTGTTCTGTTTGCA+AGG | - | chr3_2:82700251-82700270 | Msa0430830:intron | 40.0% | |
AGCCATTGTTCTGTTTGCAA+GGG | - | chr3_2:82700252-82700271 | Msa0430830:intron | 40.0% | |
!!! | CCAAGAGGAGGTTTTTTTAG+TGG | + | chr3_2:82700405-82700424 | None:intergenic | 40.0% |
CCACTAAAAAAACCTCCTCT+TGG | - | chr3_2:82700402-82700421 | Msa0430830:three_prime_UTR | 40.0% | |
AATACTATGACTCACCTTGG+AGG | + | chr3_2:82700468-82700487 | None:intergenic | 40.0% | |
!! | GAAACAAAAGGTGTCATCTC+TGG | - | chr3_2:82700574-82700593 | Msa0430830:CDS | 40.0% |
AATGATGTTACGGCTGTTAG+TGG | - | chr3_2:82700617-82700636 | Msa0430830:CDS | 40.0% | |
!! | CTGTTAGTGGTGTTGATCTT+AGG | - | chr3_2:82700630-82700649 | Msa0430830:CDS | 40.0% |
! | TCCGATAATTTTCCTACCAG+CGG | - | chr3_2:82701262-82701281 | Msa0430830:intron | 40.0% |
! | TTTTCTCAATATCAACCCGC+TGG | + | chr3_2:82701281-82701300 | None:intergenic | 40.0% |
CTCCGGAAACTAAATGATGT+GGG | - | chr3_2:82701405-82701424 | Msa0430830:intron | 40.0% | |
! | TTTTGCACCGCAGATTCAAA+CGG | - | chr3_2:82701527-82701546 | Msa0430830:intron | 40.0% |
GGGTCGTAATAAAGCAACAA+AGG | - | chr3_2:82701644-82701663 | Msa0430830:intron | 40.0% | |
GTAATGCATTGTAGGTGAAC+AGG | - | chr3_2:82701730-82701749 | Msa0430830:intron | 40.0% | |
GGGAAGTAGATGACAAAATG+AGG | - | chr3_2:82701751-82701770 | Msa0430830:intron | 40.0% | |
AATCTTCACCATCATCAGGA+AGG | - | chr3_2:82701925-82701944 | Msa0430830:intron | 40.0% | |
! | AACTCAGGTGCGTTTCTTTT+TGG | - | chr3_2:82701999-82702018 | Msa0430830:CDS | 40.0% |
! | GCTTTTATGCAAGGAAAGTG+TGG | + | chr3_2:82702235-82702254 | None:intergenic | 40.0% |
!! | TGCTTTACCGCTTTTATGCA+AGG | + | chr3_2:82702244-82702263 | None:intergenic | 40.0% |
AGTCTGAATGAAACTAGGAG+AGG | - | chr3_2:82702270-82702289 | Msa0430830:CDS | 40.0% | |
!! | TACTGGTTGATTTTGGACGA+AGG | + | chr3_2:82702312-82702331 | None:intergenic | 40.0% |
!! | TGGTTGATTTTGGATGAAGG+CGG | - | chr3_2:82702369-82702388 | Msa0430830:CDS | 40.0% |
! | CAGCACAGTACTGAAAAGAT+TGG | - | chr3_2:82702606-82702625 | Msa0430830:CDS | 40.0% |
GAAATCCAGTCGGAAGTAAT+TGG | - | chr3_2:82702647-82702666 | Msa0430830:CDS | 40.0% | |
AATAAAAACAAACCCCCTGC+TGG | + | chr3_2:82702820-82702839 | None:intergenic | 40.0% | |
TTCCCTGTGATCAAATTGTC+TGG | - | chr3_2:82703065-82703084 | Msa0430830:intron | 40.0% | |
CTCCAGACAATTTGATCACA+GGG | + | chr3_2:82703070-82703089 | None:intergenic | 40.0% | |
ACTCCAGACAATTTGATCAC+AGG | + | chr3_2:82703071-82703090 | None:intergenic | 40.0% | |
TATTGTATCTGGAGACCATG+GGG | + | chr3_2:82703174-82703193 | None:intergenic | 40.0% | |
GTATTGTATCTGGAGACCAT+GGG | + | chr3_2:82703175-82703194 | None:intergenic | 40.0% | |
TGTATTGTATCTGGAGACCA+TGG | + | chr3_2:82703176-82703195 | None:intergenic | 40.0% | |
GAAGGATGTAATTGCAGTCT+TGG | - | chr3_2:82703346-82703365 | Msa0430830:CDS | 40.0% | |
ATGTAATTGCAGTCTTGGAG+AGG | - | chr3_2:82703351-82703370 | Msa0430830:CDS | 40.0% | |
TGTAATTGCAGTCTTGGAGA+GGG | - | chr3_2:82703352-82703371 | Msa0430830:CDS | 40.0% | |
! | AGTGATGATTTGGACATCTG+AGG | + | chr3_2:82703380-82703399 | None:intergenic | 40.0% |
CCGATACAAGAGTGATGATT+TGG | + | chr3_2:82703390-82703409 | None:intergenic | 40.0% | |
TGCATACAAGAGAATGCAGA+GGG | + | chr3_2:82703760-82703779 | None:intergenic | 40.0% | |
ATGCATACAAGAGAATGCAG+AGG | + | chr3_2:82703761-82703780 | None:intergenic | 40.0% | |
TAAACTGAAACTCGTCACTG+AGG | - | chr3_2:82703813-82703832 | Msa0430830:intron | 40.0% | |
! | GGAAATTTGAGGTTTGAAGC+TGG | - | chr3_2:82703834-82703853 | Msa0430830:CDS | 40.0% |
GTGAAATTAAGATGGAGCCA+GGG | + | chr3_2:82703887-82703906 | None:intergenic | 40.0% | |
AGTGAAATTAAGATGGAGCC+AGG | + | chr3_2:82703888-82703907 | None:intergenic | 40.0% | |
AATCTCCAAATGTTTGGTCG+AGG | - | chr3_2:82703964-82703983 | Msa0430830:exon | 40.0% | |
CTGTAGATAACATATCGGGA+TGG | - | chr3_2:82704033-82704052 | Msa0430830:intron | 40.0% | |
! | CAGGGTTTAGGATAACTTCG+CGG | + | chr3_2:82697065-82697084 | None:intergenic | 45.0% |
CAAATCTGAGAGCAGCGAAT+CGG | + | chr3_2:82697153-82697172 | None:intergenic | 45.0% | |
CTGCTCTCAGATTTGTGAGA+AGG | - | chr3_2:82697158-82697177 | Msa0430830:three_prime_UTR | 45.0% | |
GCTCTCAGATTTGTGAGAAG+GGG | - | chr3_2:82697160-82697179 | Msa0430830:three_prime_UTR | 45.0% | |
!!! | TGTGAGAAGGGGTTTTGAGT+TGG | - | chr3_2:82697171-82697190 | Msa0430830:three_prime_UTR | 45.0% |
!!! | GTGAGAAGGGGTTTTGAGTT+GGG | - | chr3_2:82697172-82697191 | Msa0430830:three_prime_UTR | 45.0% |
!!! | TGAGAAGGGGTTTTGAGTTG+GGG | - | chr3_2:82697173-82697192 | Msa0430830:three_prime_UTR | 45.0% |
AGTCACGATTTCCGTTCTCT+TGG | - | chr3_2:82697280-82697299 | Msa0430830:three_prime_UTR | 45.0% | |
CAGAAAGGGAACCAAGAGAA+CGG | + | chr3_2:82697294-82697313 | None:intergenic | 45.0% | |
CCGAAGAATGAGTTGCAGAA+AGG | + | chr3_2:82697309-82697328 | None:intergenic | 45.0% | |
CAGAAAACGGTGCGTTGTTA+TGG | - | chr3_2:82697413-82697432 | Msa0430830:intron | 45.0% | |
AAAGCTTCTCGAAGACGATG+AGG | - | chr3_2:82697449-82697468 | Msa0430830:intron | 45.0% | |
TCGATTCAAAGCAGCTTGGA+AGG | + | chr3_2:82697508-82697527 | None:intergenic | 45.0% | |
TGTCTCGATTCAAAGCAGCT+TGG | + | chr3_2:82697512-82697531 | None:intergenic | 45.0% | |
! | GCTGCTTTGAATCGAGACAT+TGG | - | chr3_2:82697513-82697532 | Msa0430830:intron | 45.0% |
! | GCTTTGAATCGAGACATTGG+CGG | - | chr3_2:82697516-82697535 | Msa0430830:intron | 45.0% |
TACCTGCGTCAGAATCAGAA+AGG | + | chr3_2:82697560-82697579 | None:intergenic | 45.0% | |
!! | CCTGATTTTGACAGTCAGTC+TGG | + | chr3_2:82697731-82697750 | None:intergenic | 45.0% |
CCAGACTGACTGTCAAAATC+AGG | - | chr3_2:82697728-82697747 | Msa0430830:intron | 45.0% | |
AGAGCAACCTTCTTCCGAAA+CGG | - | chr3_2:82697773-82697792 | Msa0430830:intron | 45.0% | |
! | TTTAGCTCCGTTTCGGAAGA+AGG | + | chr3_2:82697783-82697802 | None:intergenic | 45.0% |
GAAACGGAGCTAAAACCACA+TGG | - | chr3_2:82697789-82697808 | Msa0430830:intron | 45.0% | |
GATACAGAATGTTGCCTCAC+AGG | - | chr3_2:82697827-82697846 | Msa0430830:intron | 45.0% | |
GGAGAGATTCGTCTTGTGAT+TGG | + | chr3_2:82697881-82697900 | None:intergenic | 45.0% | |
AAACAGGTAAAGTCTGGCGT+TGG | + | chr3_2:82697902-82697921 | None:intergenic | 45.0% | |
GCAGCAGATGAGTAATCAAC+AGG | - | chr3_2:82698034-82698053 | Msa0430830:three_prime_UTR | 45.0% | |
GATGAGTAATCAACAGGCCT+CGG | - | chr3_2:82698040-82698059 | Msa0430830:three_prime_UTR | 45.0% | |
ATAGGGAGCAACAAGCCAAA+TGG | + | chr3_2:82698110-82698129 | None:intergenic | 45.0% | |
! | ATTGATTCCCCAACTTCCCA+AGG | - | chr3_2:82698130-82698149 | Msa0430830:intron | 45.0% |
GTAGTTTAGCACGGCATAGA+GGG | + | chr3_2:82698236-82698255 | None:intergenic | 45.0% | |
AGTAGTTTAGCACGGCATAG+AGG | + | chr3_2:82698237-82698256 | None:intergenic | 45.0% | |
CCACAATCCCTTTCATAAGC+CGG | + | chr3_2:82698363-82698382 | None:intergenic | 45.0% | |
CGGCTTATGAAAGGGATTGT+GGG | - | chr3_2:82698361-82698380 | Msa0430830:intron | 45.0% | |
GGCTTATGAAAGGGATTGTG+GGG | - | chr3_2:82698362-82698381 | Msa0430830:intron | 45.0% | |
GCTTATGAAAGGGATTGTGG+GGG | - | chr3_2:82698363-82698382 | Msa0430830:intron | 45.0% | |
CTGTCCAGAAGAACCTGTAT+TGG | + | chr3_2:82698518-82698537 | None:intergenic | 45.0% | |
AACAGTTGGCATCCTTACAG+GGG | + | chr3_2:82698545-82698564 | None:intergenic | 45.0% | |
GTAACAGTTGGCATCCTTAC+AGG | + | chr3_2:82698547-82698566 | None:intergenic | 45.0% | |
! | ATGCCAACTGTTACTTCCAG+TGG | - | chr3_2:82698553-82698572 | Msa0430830:intron | 45.0% |
GTTCCACTGGAAGTAACAGT+TGG | + | chr3_2:82698559-82698578 | None:intergenic | 45.0% | |
ATGCAGTTGTGCCAATGCAT+GGG | + | chr3_2:82698596-82698615 | None:intergenic | 45.0% | |
ACTCGAACATCATGTTCCTG+AGG | + | chr3_2:82698724-82698743 | None:intergenic | 45.0% | |
! | GCTGCTGTTGCTGCTTATTA+AGG | + | chr3_2:82698828-82698847 | None:intergenic | 45.0% |
CATTTCCCATCGACATATGG+AGG | - | chr3_2:82698853-82698872 | Msa0430830:intron | 45.0% | |
TAGTGGTTGTCCCGGAAAAA+TGG | + | chr3_2:82698897-82698916 | None:intergenic | 45.0% | |
GAAAGATGACGAGGAACTAG+TGG | + | chr3_2:82698914-82698933 | None:intergenic | 45.0% | |
TTGTGGTCTGAAAGATGACG+AGG | + | chr3_2:82698923-82698942 | None:intergenic | 45.0% | |
GAATCATGAGGATGAGGTTG+TGG | + | chr3_2:82698940-82698959 | None:intergenic | 45.0% | |
TGCCTCATGTGTGAATCATG+AGG | + | chr3_2:82698952-82698971 | None:intergenic | 45.0% | |
GGGTTGCCTTCTGTTAATTC+TGG | - | chr3_2:82699225-82699244 | Msa0430830:intron | 45.0% | |
GGTCAAAATGAACAGGGTAG+TGG | - | chr3_2:82699246-82699265 | Msa0430830:intron | 45.0% | |
TGTTGTATGTGCCATGCTAG+TGG | + | chr3_2:82699322-82699341 | None:intergenic | 45.0% | |
CTTACAGAGACAGTTGGATC+TGG | + | chr3_2:82699393-82699412 | None:intergenic | 45.0% | |
CAGATCTAAATAGGGCTGCT+AGG | - | chr3_2:82699916-82699935 | Msa0430830:intron | 45.0% | |
TGCCCTTGCAAACAGAACAA+TGG | + | chr3_2:82700257-82700276 | None:intergenic | 45.0% | |
!! | TGACACCAGAAGTGCTAGTT+GGG | + | chr3_2:82700371-82700390 | None:intergenic | 45.0% |
!! | ATGACACCAGAAGTGCTAGT+TGG | + | chr3_2:82700372-82700391 | None:intergenic | 45.0% |
! | AAGAAACCACTTGAGGCACT+TGG | - | chr3_2:82700429-82700448 | Msa0430830:three_prime_UTR | 45.0% |
!! | ACAGTTATTTTCTGGGCCCA+AGG | - | chr3_2:82700759-82700778 | Msa0430830:CDS | 45.0% |
GAAACTCGACTGTCATCCTT+GGG | + | chr3_2:82700778-82700797 | None:intergenic | 45.0% | |
TGAAACTCGACTGTCATCCT+TGG | + | chr3_2:82700779-82700798 | None:intergenic | 45.0% | |
TCGAAGAGTTGTCCAAGAAG+AGG | - | chr3_2:82700807-82700826 | Msa0430830:CDS | 45.0% | |
AAGAGTTGTCCAAGAAGAGG+AGG | - | chr3_2:82700810-82700829 | Msa0430830:CDS | 45.0% | |
TCAGACTTTCCTCCTCTTCT+TGG | + | chr3_2:82700822-82700841 | None:intergenic | 45.0% | |
! | GAAAGGCATGGGTAATGATG+TGG | - | chr3_2:82701024-82701043 | Msa0430830:CDS | 45.0% |
TGTGGAAAGATGCTTGTCAC+TGG | - | chr3_2:82701042-82701061 | Msa0430830:intron | 45.0% | |
CCCGCTGGTAGGAAAATTAT+CGG | + | chr3_2:82701266-82701285 | None:intergenic | 45.0% | |
! | CCGATAATTTTCCTACCAGC+GGG | - | chr3_2:82701263-82701282 | Msa0430830:intron | 45.0% |
ATAGGAAAGCAAGGGAAGAG+TGG | - | chr3_2:82701355-82701374 | Msa0430830:intron | 45.0% | |
TAGGAAAGCAAGGGAAGAGT+GGG | - | chr3_2:82701356-82701375 | Msa0430830:intron | 45.0% | |
GGAAGAGTGGGAGAAAAAAC+AGG | - | chr3_2:82701368-82701387 | Msa0430830:intron | 45.0% | |
AGGCTGAAACAGAAAAGCTC+CGG | - | chr3_2:82701388-82701407 | Msa0430830:intron | 45.0% | |
GCTCCGGAAACTAAATGATG+TGG | - | chr3_2:82701404-82701423 | Msa0430830:intron | 45.0% | |
!!! | GGTTCCATTTTGTCGCTTTG+TGG | - | chr3_2:82701426-82701445 | Msa0430830:intron | 45.0% |
CATAGGTCCGTTTGAATCTG+CGG | + | chr3_2:82701537-82701556 | None:intergenic | 45.0% | |
GTATAGGTAGAGGGTAGTTC+CGG | - | chr3_2:82701594-82701613 | Msa0430830:intron | 45.0% | |
TGGTGACAAGGAGAAAGATG+AGG | - | chr3_2:82701623-82701642 | Msa0430830:intron | 45.0% | |
GGTGACAAGGAGAAAGATGA+GGG | - | chr3_2:82701624-82701643 | Msa0430830:intron | 45.0% | |
GAGGACAAATGCTGCAAATG+TGG | - | chr3_2:82701770-82701789 | Msa0430830:intron | 45.0% | |
GAGATGACATGCTGTCAAAG+TGG | - | chr3_2:82701814-82701833 | Msa0430830:intron | 45.0% | |
GCTGTCAAAGTGGCAATTGA+TGG | - | chr3_2:82701824-82701843 | Msa0430830:intron | 45.0% | |
CGCAAATCTTCACCATCATC+AGG | - | chr3_2:82701921-82701940 | Msa0430830:intron | 45.0% | |
TTTGTGCTCCTTCCTGATGA+TGG | + | chr3_2:82701936-82701955 | None:intergenic | 45.0% | |
AGAAAAGGTCCAACTTCGCT+TGG | - | chr3_2:82701975-82701994 | Msa0430830:intron | 45.0% | |
GAAAAGGTCCAACTTCGCTT+GGG | - | chr3_2:82701976-82701995 | Msa0430830:intron | 45.0% | |
!! | GGTTGATTTTGGACGAAGGT+GGG | + | chr3_2:82702308-82702327 | None:intergenic | 45.0% |
!! | TGGTTGATTTTGGACGAAGG+TGG | + | chr3_2:82702309-82702328 | None:intergenic | 45.0% |
!!! | TAAGTTGTTTTGGAGCTCGC+TGG | - | chr3_2:82702349-82702368 | Msa0430830:CDS | 45.0% |
!! | CGCTGGTTGATTTTGGATGA+AGG | - | chr3_2:82702366-82702385 | Msa0430830:CDS | 45.0% |
!! | GGTTGATTTTGGATGAAGGC+GGG | - | chr3_2:82702370-82702389 | Msa0430830:CDS | 45.0% |
TAGGAAGTTGGGCTCACTAA+TGG | - | chr3_2:82702411-82702430 | Msa0430830:CDS | 45.0% | |
! | CAGAAGCACAGAAATCCAGT+CGG | - | chr3_2:82702637-82702656 | Msa0430830:CDS | 45.0% |
TACAGCCAATTACTTCCGAC+TGG | + | chr3_2:82702655-82702674 | None:intergenic | 45.0% | |
ATATCACACATGTGCCAGCA+GGG | - | chr3_2:82702803-82702822 | Msa0430830:CDS | 45.0% | |
CTGTTGGCAACAAGAACACA+GGG | + | chr3_2:82703259-82703278 | None:intergenic | 45.0% | |
TGTGTTCTTGTTGCCAACAG+CGG | - | chr3_2:82703259-82703278 | Msa0430830:CDS | 45.0% | |
CAACAGCGGCTAGGAAATTT+GGG | - | chr3_2:82703273-82703292 | Msa0430830:CDS | 45.0% | |
TCTTGTATCGGATGCATGAG+AGG | - | chr3_2:82703399-82703418 | Msa0430830:CDS | 45.0% | |
TCTGATACTCCAACCGAATG+AGG | - | chr3_2:82703428-82703447 | Msa0430830:CDS | 45.0% | |
ATACAAGAGAATGCAGAGGG+TGG | + | chr3_2:82703757-82703776 | None:intergenic | 45.0% | |
CTCGTCACTGAGGAAATTTG+AGG | - | chr3_2:82703823-82703842 | Msa0430830:intron | 45.0% | |
TCCAAATGTTTGGTCGAGGT+GGG | - | chr3_2:82703968-82703987 | Msa0430830:exon | 45.0% | |
TCGAGAAAGTGAGTCCATCA+TGG | + | chr3_2:82704251-82704270 | None:intergenic | 45.0% | |
GAAACAGTGGAAGCTCCTTG+AGG | + | chr3_2:82697101-82697120 | None:intergenic | 50.0% | |
GTCGAGACAAAGGGAAACAG+TGG | + | chr3_2:82697114-82697133 | None:intergenic | 50.0% | |
!!! | GAGAAGGGGTTTTGAGTTGG+GGG | - | chr3_2:82697174-82697193 | Msa0430830:three_prime_UTR | 50.0% |
CACCTTTCTGATTCTGACGC+AGG | - | chr3_2:82697555-82697574 | Msa0430830:intron | 50.0% | |
TGGTTGTCGTGACTCGAAGT+CGG | + | chr3_2:82697711-82697730 | None:intergenic | 50.0% | |
AAAACCACATGGACCTGTCG+TGG | - | chr3_2:82697800-82697819 | Msa0430830:intron | 50.0% | |
!! | TTCTGTATCGGTTCCACGAC+AGG | + | chr3_2:82697816-82697835 | None:intergenic | 50.0% |
ACTCGGTTGTTCATTGACCG+AGG | + | chr3_2:82698060-82698079 | None:intergenic | 50.0% | |
TCGGTCAATGAACAACCGAG+TGG | - | chr3_2:82698059-82698078 | Msa0430830:three_prime_UTR | 50.0% | |
!! | CTACGATTGACTTGGCCACT+CGG | + | chr3_2:82698077-82698096 | None:intergenic | 50.0% |
AGTTGCATTGCCCTGTCCTT+GGG | + | chr3_2:82698149-82698168 | None:intergenic | 50.0% | |
AAGTTGCATTGCCCTGTCCT+TGG | + | chr3_2:82698150-82698169 | None:intergenic | 50.0% | |
AGCACGGCATAGAGGGAAAA+AGG | + | chr3_2:82698229-82698248 | None:intergenic | 50.0% | |
CCGGCTTATGAAAGGGATTG+TGG | - | chr3_2:82698360-82698379 | Msa0430830:intron | 50.0% | |
TTGTGGGGGATCAGATGCTT+AGG | - | chr3_2:82698377-82698396 | Msa0430830:intron | 50.0% | |
ACAGTTGGCATCCTTACAGG+GGG | + | chr3_2:82698544-82698563 | None:intergenic | 50.0% | |
TGCAGTTGTGCCAATGCATG+GGG | + | chr3_2:82698595-82698614 | None:intergenic | 50.0% | |
GATGCAGTTGTGCCAATGCA+TGG | + | chr3_2:82698597-82698616 | None:intergenic | 50.0% | |
! | AGGTTGGCTCACTCTTCACT+TGG | + | chr3_2:82698672-82698691 | None:intergenic | 50.0% |
CACTGCCTCCATATGTCGAT+GGG | + | chr3_2:82698861-82698880 | None:intergenic | 50.0% | |
GATCCTAAGAGAATGCCAGG+TGG | - | chr3_2:82699033-82699052 | Msa0430830:intron | 50.0% | |
GATCCACCTGGCATTCTCTT+AGG | + | chr3_2:82699039-82699058 | None:intergenic | 50.0% | |
! | CAGGGTAGTGGCATCAATCA+AGG | - | chr3_2:82699258-82699277 | Msa0430830:intron | 50.0% |
CAGATCCCAACTAGCACTTC+TGG | - | chr3_2:82700363-82700382 | Msa0430830:three_prime_UTR | 50.0% | |
AGTGGTTTCTTCTGGCCAAG+AGG | + | chr3_2:82700420-82700439 | None:intergenic | 50.0% | |
TGGCCAGAAGAAACCACTTG+AGG | - | chr3_2:82700422-82700441 | Msa0430830:three_prime_UTR | 50.0% | |
GTGCCTCAAGTGGTTTCTTC+TGG | + | chr3_2:82700428-82700447 | None:intergenic | 50.0% | |
GAAGAACCAAGTGCCTCAAG+TGG | + | chr3_2:82700438-82700457 | None:intergenic | 50.0% | |
ACTATGACTCACCTTGGAGG+AGG | + | chr3_2:82700465-82700484 | None:intergenic | 50.0% | |
CATGCCTTTCAAGCCACACT+CGG | + | chr3_2:82701014-82701033 | None:intergenic | 50.0% | |
! | GAGTGTGGCTTGAAAGGCAT+GGG | - | chr3_2:82701013-82701032 | Msa0430830:CDS | 50.0% |
TGTGTGGAGGAAAGAATGCG+TGG | - | chr3_2:82701141-82701160 | Msa0430830:intron | 50.0% | |
CTCAATATCAACCCGCTGGT+AGG | + | chr3_2:82701277-82701296 | None:intergenic | 50.0% | |
GCATGCCCAAGAAATGTGCA+AGG | + | chr3_2:82701494-82701513 | None:intergenic | 50.0% | |
!! | TTCCGGAGTTGATGGTGACA+AGG | - | chr3_2:82701611-82701630 | Msa0430830:intron | 50.0% |
CTCCTTGTCACCATCAACTC+CGG | + | chr3_2:82701616-82701635 | None:intergenic | 50.0% | |
! | AATTGATGGCTGAGCAAGCC+AGG | - | chr3_2:82701838-82701857 | Msa0430830:intron | 50.0% |
TGTAGACAGCTGCAAGTAGC+AGG | + | chr3_2:82702031-82702050 | None:intergenic | 50.0% | |
!! | TGGAGCTCGCTGGTTGATTT+TGG | - | chr3_2:82702359-82702378 | Msa0430830:CDS | 50.0% |
AGAAGCCAGGAGTAGGAAGT+TGG | - | chr3_2:82702399-82702418 | Msa0430830:CDS | 50.0% | |
GAAGCCAGGAGTAGGAAGTT+GGG | - | chr3_2:82702400-82702419 | Msa0430830:CDS | 50.0% | |
CATATCACACATGTGCCAGC+AGG | - | chr3_2:82702802-82702821 | Msa0430830:CDS | 50.0% | |
TATCACACATGTGCCAGCAG+GGG | - | chr3_2:82702804-82702823 | Msa0430830:CDS | 50.0% | |
TGATCACAGGGAACACACGA+GGG | + | chr3_2:82703058-82703077 | None:intergenic | 50.0% | |
TTGATCACAGGGAACACACG+AGG | + | chr3_2:82703059-82703078 | None:intergenic | 50.0% | |
GCTGTTGGCAACAAGAACAC+AGG | + | chr3_2:82703260-82703279 | None:intergenic | 50.0% | |
CCAAATTTCCTAGCCGCTGT+TGG | + | chr3_2:82703275-82703294 | None:intergenic | 50.0% | |
CCAACAGCGGCTAGGAAATT+TGG | - | chr3_2:82703272-82703291 | Msa0430830:CDS | 50.0% | |
AGCTCGTAGCATCTCTGTGA+AGG | - | chr3_2:82703328-82703347 | Msa0430830:CDS | 50.0% | |
AGGGATGCAACAGTGTCAAG+GGG | + | chr3_2:82703868-82703887 | None:intergenic | 50.0% | |
CAGGGATGCAACAGTGTCAA+GGG | + | chr3_2:82703869-82703888 | None:intergenic | 50.0% | |
CTCCAAATGTTTGGTCGAGG+TGG | - | chr3_2:82703967-82703986 | Msa0430830:exon | 50.0% | |
ACCCACCTCGACCAAACATT+TGG | + | chr3_2:82703972-82703991 | None:intergenic | 50.0% | |
TCGGGATGGTGATATGCATC+AGG | - | chr3_2:82704047-82704066 | Msa0430830:intron | 50.0% | |
CGGGATGGTGATATGCATCA+GGG | - | chr3_2:82704048-82704067 | Msa0430830:intron | 50.0% | |
CAGTGGAAGCTCCTTGAGGA+CGG | + | chr3_2:82697097-82697116 | None:intergenic | 55.0% | |
GAAGCGGAGGTCGAGACAAA+GGG | + | chr3_2:82697123-82697142 | None:intergenic | 55.0% | |
TTCCCCAACTTCCCAAGGAC+AGG | - | chr3_2:82698135-82698154 | Msa0430830:intron | 55.0% | |
TCCCCAACTTCCCAAGGACA+GGG | - | chr3_2:82698136-82698155 | Msa0430830:intron | 55.0% | |
TGCCCTGTCCTTGGGAAGTT+GGG | + | chr3_2:82698141-82698160 | None:intergenic | 55.0% | |
TTGCCCTGTCCTTGGGAAGT+TGG | + | chr3_2:82698142-82698161 | None:intergenic | 55.0% | |
AGATCCGCCGTTCACATGCA+AGG | - | chr3_2:82698802-82698821 | Msa0430830:intron | 55.0% | |
AAGGCCTTGCATGTGAACGG+CGG | + | chr3_2:82698809-82698828 | None:intergenic | 55.0% | |
CCACTGCCTCCATATGTCGA+TGG | + | chr3_2:82698862-82698881 | None:intergenic | 55.0% | |
CCATCGACATATGGAGGCAG+TGG | - | chr3_2:82698859-82698878 | Msa0430830:intron | 55.0% | |
TCGACATATGGAGGCAGTGG+TGG | - | chr3_2:82698862-82698881 | Msa0430830:intron | 55.0% | |
CGAGGAACTAGTGGTTGTCC+CGG | + | chr3_2:82698905-82698924 | None:intergenic | 55.0% | |
ACAGTCGACACAGATCCACC+TGG | + | chr3_2:82699051-82699070 | None:intergenic | 55.0% | |
!! | AGGTGGATCTGTGTCGACTG+TGG | - | chr3_2:82699050-82699069 | Msa0430830:intron | 55.0% |
CGGCATTCTCTCCCTTCATG+TGG | - | chr3_2:82699954-82699973 | Msa0430830:intron | 55.0% | |
GGTTTCTTCTGGCCAAGAGG+AGG | + | chr3_2:82700417-82700436 | None:intergenic | 55.0% | |
TGACTCACCTTGGAGGAGGA+GGG | + | chr3_2:82700461-82700480 | None:intergenic | 55.0% | |
ATGACTCACCTTGGAGGAGG+AGG | + | chr3_2:82700462-82700481 | None:intergenic | 55.0% | |
ATGTTGGCAGTGACCGAGTG+TGG | - | chr3_2:82700998-82701017 | Msa0430830:CDS | 55.0% | |
GTGACCGAGTGTGGCTTGAA+AGG | - | chr3_2:82701007-82701026 | Msa0430830:CDS | 55.0% | |
CGAGTGTGGCTTGAAAGGCA+TGG | - | chr3_2:82701012-82701031 | Msa0430830:CDS | 55.0% | |
GAGGGTAGTTCCGGAGTTGA+TGG | - | chr3_2:82701603-82701622 | Msa0430830:intron | 55.0% | |
! | AAGCCAGGCAGAAGCGTGAA+GGG | - | chr3_2:82701853-82701872 | Msa0430830:intron | 55.0% |
CCTGAGTTCCCAAGCGAAGT+TGG | + | chr3_2:82701987-82702006 | None:intergenic | 55.0% | |
CCAACTTCGCTTGGGAACTC+AGG | - | chr3_2:82701984-82702003 | Msa0430830:intron | 55.0% | |
GCAGTAGAGAAGCCAGGAGT+AGG | - | chr3_2:82702392-82702411 | Msa0430830:CDS | 55.0% | |
TGAGCCCAACTTCCTACTCC+TGG | + | chr3_2:82702407-82702426 | None:intergenic | 55.0% | |
ATCACACATGTGCCAGCAGG+GGG | - | chr3_2:82702805-82702824 | Msa0430830:CDS | 55.0% | |
TCTTGTTGCCAACAGCGGCT+AGG | - | chr3_2:82703264-82703283 | Msa0430830:CDS | 55.0% | |
CCAGGGATGCAACAGTGTCA+AGG | + | chr3_2:82703870-82703889 | None:intergenic | 55.0% | |
CCTTGACACTGTTGCATCCC+TGG | - | chr3_2:82703867-82703886 | Msa0430830:CDS | 55.0% | |
CGGTGGTTCCGTCAGGGTTT+AGG | + | chr3_2:82697077-82697096 | None:intergenic | 60.0% | |
TGAGGACGGTGGTTCCGTCA+GGG | + | chr3_2:82697083-82697102 | None:intergenic | 60.0% | |
TTGAGGACGGTGGTTCCGTC+AGG | + | chr3_2:82697084-82697103 | None:intergenic | 60.0% | |
TGACGGAACCACCGTCCTCA+AGG | - | chr3_2:82697083-82697102 | Msa0430830:three_prime_UTR | 60.0% | |
TGGAAGCTCCTTGAGGACGG+TGG | + | chr3_2:82697094-82697113 | None:intergenic | 60.0% | |
GGAAGCGGAGGTCGAGACAA+AGG | + | chr3_2:82697124-82697143 | None:intergenic | 60.0% | |
TGTCTCGACCTCCGCTTCCA+CGG | - | chr3_2:82697125-82697144 | Msa0430830:three_prime_UTR | 60.0% | |
TGACTCGAAGTCGGCCACGT+TGG | + | chr3_2:82697702-82697721 | None:intergenic | 60.0% | |
GGTTCCACGACAGGTCCATG+TGG | + | chr3_2:82697807-82697826 | None:intergenic | 60.0% | |
GCCCTGTCCTTGGGAAGTTG+GGG | + | chr3_2:82698140-82698159 | None:intergenic | 60.0% | |
GTTCTTCCCCTCCTCCTCCA+AGG | - | chr3_2:82700451-82700470 | Msa0430830:three_prime_UTR | 60.0% | |
GACTCACCTTGGAGGAGGAG+GGG | + | chr3_2:82700460-82700479 | None:intergenic | 60.0% | |
ATCTCCCCCAACAGCAGCTC+GGG | + | chr3_2:82701799-82701818 | None:intergenic | 60.0% | |
CATCTCCCCCAACAGCAGCT+CGG | + | chr3_2:82701800-82701819 | None:intergenic | 60.0% | |
! | CAAGCCAGGCAGAAGCGTGA+AGG | - | chr3_2:82701852-82701871 | Msa0430830:intron | 60.0% |
! | AGCCAGGCAGAAGCGTGAAG+GGG | - | chr3_2:82701854-82701873 | Msa0430830:intron | 60.0% |
TTTGGTCGAGGTGGGTGCGT+TGG | - | chr3_2:82703976-82703995 | Msa0430830:intron | 60.0% | |
!! | AATCGGTGCCGTGGAAGCGG+AGG | + | chr3_2:82697136-82697155 | None:intergenic | 65.0% |
!! | GCGAATCGGTGCCGTGGAAG+CGG | + | chr3_2:82697139-82697158 | None:intergenic | 65.0% |
!! | AGAGCAGCGAATCGGTGCCG+TGG | + | chr3_2:82697145-82697164 | None:intergenic | 65.0% |
CTGGACAGCAGCCCCCTGTA+AGG | - | chr3_2:82698530-82698549 | Msa0430830:intron | 65.0% | |
TGGCAGCCCGAGCTGCTGTT+GGG | - | chr3_2:82701790-82701809 | Msa0430830:intron | 65.0% | |
! | GCCAGGCAGAAGCGTGAAGG+GGG | - | chr3_2:82701855-82701874 | Msa0430830:intron | 65.0% |
! | CCAGGCAGAAGCGTGAAGGG+GGG | - | chr3_2:82701856-82701875 | Msa0430830:intron | 65.0% |
! | GCAGAAGCGTGAAGGGGGGA+CGG | - | chr3_2:82701860-82701879 | Msa0430830:intron | 65.0% |
AGGCGGGCAGTAGAGAAGCC+AGG | - | chr3_2:82702386-82702405 | Msa0430830:CDS | 65.0% | |
GTGGCAGCCCGAGCTGCTGT+TGG | - | chr3_2:82701789-82701808 | Msa0430830:intron | 70.0% | |
GGCAGCCCGAGCTGCTGTTG+GGG | - | chr3_2:82701791-82701810 | Msa0430830:intron | 70.0% | |
GCAGCCCGAGCTGCTGTTGG+GGG | - | chr3_2:82701792-82701811 | Msa0430830:intron | 70.0% | |
CCCCCCTTCACGCTTCTGCC+TGG | + | chr3_2:82701859-82701878 | None:intergenic | 70.0% | |
GGGGGGACGGACACTGCATC+TGG | - | chr3_2:82701873-82701892 | Msa0430830:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 82697051 | 82704352 | 82697051 | ID=Msa0430830;Name=Msa0430830 |
chr3_2 | mRNA | 82697051 | 82704352 | 82697051 | ID=Msa0430830-mRNA-1;Parent=Msa0430830;Name=Msa0430830-mRNA-1;_AED=0.13;_eAED=0.13;_QI=294|1|1|1|0.85|0.66|15|1186|634 |
chr3_2 | exon | 82697051 | 82697364 | 82697051 | ID=Msa0430830-mRNA-1:exon:23044;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82697954 | 82698124 | 82697954 | ID=Msa0430830-mRNA-1:exon:23043;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82699398 | 82699659 | 82699398 | ID=Msa0430830-mRNA-1:exon:23042;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82699738 | 82699803 | 82699738 | ID=Msa0430830-mRNA-1:exon:23041;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82699981 | 82700121 | 82699981 | ID=Msa0430830-mRNA-1:exon:23040;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82700206 | 82700262 | 82700206 | ID=Msa0430830-mRNA-1:exon:23039;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82700340 | 82700655 | 82700340 | ID=Msa0430830-mRNA-1:exon:23038;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82700751 | 82700832 | 82700751 | ID=Msa0430830-mRNA-1:exon:23037;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82700931 | 82701049 | 82700931 | ID=Msa0430830-mRNA-1:exon:23036;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82701996 | 82702142 | 82701996 | ID=Msa0430830-mRNA-1:exon:23035;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82702245 | 82702895 | 82702245 | ID=Msa0430830-mRNA-1:exon:23034;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82702977 | 82703072 | 82702977 | ID=Msa0430830-mRNA-1:exon:23033;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82703210 | 82703733 | 82703210 | ID=Msa0430830-mRNA-1:exon:23032;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82703827 | 82703987 | 82703827 | ID=Msa0430830-mRNA-1:exon:23031;Parent=Msa0430830-mRNA-1 |
chr3_2 | exon | 82704075 | 82704352 | 82704075 | ID=Msa0430830-mRNA-1:exon:23030;Parent=Msa0430830-mRNA-1 |
chr3_2 | five_prime_UTR | 82704075 | 82704352 | 82704075 | ID=Msa0430830-mRNA-1:five_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | five_prime_UTR | 82703972 | 82703987 | 82703972 | ID=Msa0430830-mRNA-1:five_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82703827 | 82703971 | 82703827 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82703210 | 82703733 | 82703210 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82702977 | 82703072 | 82702977 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82702245 | 82702895 | 82702245 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82701996 | 82702142 | 82701996 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82700931 | 82701049 | 82700931 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82700751 | 82700832 | 82700751 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | CDS | 82700515 | 82700655 | 82700515 | ID=Msa0430830-mRNA-1:cds;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82700340 | 82700514 | 82700340 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82700206 | 82700262 | 82700206 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82699981 | 82700121 | 82699981 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82699738 | 82699803 | 82699738 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82699398 | 82699659 | 82699398 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82697954 | 82698124 | 82697954 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
chr3_2 | three_prime_UTR | 82697051 | 82697364 | 82697051 | ID=Msa0430830-mRNA-1:three_prime_utr;Parent=Msa0430830-mRNA-1 |
Gene Sequence |
Protein sequence |