Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445800 | sp|F4K4L7|TAF4B_ARATH | 42.471 | 963 | 354 | 27 | 1 | 876 | 1 | 850 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445800 | A0A396IXC6 | 94.766 | 917 | 15 | 2 | 1 | 887 | 1 | 914 | 0.0 | 1761 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030700 | Msa1445800 | 0.816602 | 5.082441e-52 | -8.615850e-47 |
| Msa0078120 | Msa1445800 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa0733010 | Msa1445800 | 0.850247 | 1.921301e-60 | -8.615850e-47 |
| Msa0773990 | Msa1445800 | 0.847477 | 1.128049e-59 | -8.615850e-47 |
| Msa0831110 | Msa1445800 | 0.800381 | 1.480175e-48 | -8.615850e-47 |
| Msa0168310 | Msa1445800 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa1225860 | Msa1445800 | -0.806637 | 7.468375e-50 | -8.615850e-47 |
| Msa1299400 | Msa1445800 | -0.826461 | 2.679212e-54 | -8.615850e-47 |
| Msa1331050 | Msa1445800 | -0.821638 | 3.629638e-53 | -8.615850e-47 |
| Msa0380930 | Msa1445800 | 0.945055 | 6.236971e-104 | -8.615850e-47 |
| Msa0430830 | Msa1445800 | 0.971284 | 6.366883e-133 | -8.615850e-47 |
| Msa0434290 | Msa1445800 | 0.818171 | 2.252961e-52 | -8.615850e-47 |
| Msa0434390 | Msa1445800 | 0.803855 | 2.856706e-49 | -8.615850e-47 |
| Msa0999680 | Msa1445800 | 0.800422 | 1.451861e-48 | -8.615850e-47 |
| Msa0282780 | Msa1445800 | 0.800044 | 1.733744e-48 | -8.615850e-47 |
| Msa1122150 | Msa1445800 | 0.812734 | 3.652703e-51 | -8.615850e-47 |
| Msa1155170 | Msa1445800 | -0.806167 | 9.381448e-50 | -8.615850e-47 |
| Msa1211230 | Msa1445800 | -0.816817 | 4.547619e-52 | -8.615850e-47 |
| Msa1213890 | Msa1445800 | 0.839340 | 1.680620e-57 | -8.615850e-47 |
| Msa0583360 | Msa1445800 | -0.805026 | 1.628236e-49 | -8.615850e-47 |
| Msa0855870 | Msa1445800 | 0.809575 | 1.768121e-50 | -8.615850e-47 |
| Msa0879930 | Msa1445800 | 0.801792 | 7.618936e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445800 | MtrunA17_Chr3g0134641 | 94.766 | 917 | 15 | 2 | 1 | 887 | 1 | 914 | 0.0 | 1761 |
| Msa1445800 | MtrunA17_Chr3g0134671 | 63.188 | 345 | 82 | 2 | 173 | 487 | 8 | 337 | 1.91e-137 | 416 |
| Msa1445800 | MtrunA17_Chr3g0134691 | 82.456 | 114 | 20 | 0 | 290 | 403 | 1 | 114 | 4.17e-59 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445800 | AT5G43130.1 | 43.390 | 938 | 352 | 26 | 1 | 876 | 1 | 821 | 0.0 | 563 |
| Msa1445800 | AT5G43130.2 | 42.471 | 963 | 354 | 27 | 1 | 876 | 1 | 850 | 0.0 | 552 |
| Msa1445800 | AT5G43130.3 | 42.938 | 885 | 330 | 25 | 1 | 823 | 1 | 772 | 8.31e-168 | 508 |
| Msa1445800 | AT1G27720.9 | 35.660 | 788 | 346 | 22 | 150 | 884 | 1 | 680 | 3.56e-108 | 348 |
| Msa1445800 | AT1G27720.5 | 37.622 | 715 | 315 | 20 | 193 | 884 | 51 | 657 | 6.27e-108 | 347 |
| Msa1445800 | AT1G27720.4 | 35.660 | 788 | 346 | 22 | 150 | 884 | 26 | 705 | 7.56e-108 | 348 |
| Msa1445800 | AT1G27720.3 | 37.622 | 715 | 315 | 20 | 193 | 884 | 56 | 662 | 1.23e-107 | 347 |
| Msa1445800 | AT1G27720.7 | 37.622 | 715 | 315 | 20 | 193 | 884 | 56 | 662 | 1.23e-107 | 347 |
| Msa1445800 | AT1G27720.1 | 37.622 | 715 | 315 | 20 | 193 | 884 | 114 | 720 | 3.95e-107 | 347 |
| Msa1445800 | AT1G27720.6 | 33.641 | 651 | 308 | 18 | 150 | 747 | 26 | 605 | 5.37e-80 | 271 |
| Msa1445800 | AT1G27720.2 | 35.813 | 578 | 277 | 16 | 193 | 747 | 56 | 562 | 7.52e-80 | 269 |
| Msa1445800 | AT1G27720.8 | 35.813 | 578 | 277 | 16 | 193 | 747 | 56 | 562 | 7.52e-80 | 269 |
Find 238 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAGCGGCTAGGAAATT+TGG | 0.161653 | tig0031177:-28274 | Msa1445800:intron |
| CTGTTAGTGGTGTTGATCTT+AGG | 0.200282 | tig0031177:-30916 | Msa1445800:CDS |
| TCAGACTTTCCTCCTCTTCT+TGG | 0.210744 | tig0031177:+30727 | None:intergenic |
| GGGTTGCCTTCTGTTAATTC+TGG | 0.221734 | tig0031177:-32326 | Msa1445800:CDS |
| CACACCAAACTTCAAATTCT+TGG | 0.235872 | tig0031177:-32463 | Msa1445800:CDS |
| GCTGCTGTTGCTGCTTATTA+AGG | 0.269901 | tig0031177:+32726 | None:intergenic |
| CGGTGGTTCCGTCAGGGTTT+AGG | 0.290502 | tig0031177:+34474 | None:intergenic |
| AACCCACATCATTTAGTTTC+CGG | 0.293138 | tig0031177:+30139 | None:intergenic |
| GCAAAATGGGAAGCAGTATT+TGG | 0.299631 | tig0031177:+32191 | None:intergenic |
| GTGCCTCAAGTGGTTTCTTC+TGG | 0.299881 | tig0031177:+31122 | None:intergenic |
| TTCCCTTTCTGCAACTCATT+CGG | 0.316834 | tig0031177:-34245 | Msa1445800:five_prime_UTR |
| AACATCAGCAGAACAAAATT+CGG | 0.318096 | tig0031177:-32438 | Msa1445800:CDS |
| GTAACAGTTGGCATCCTTAC+AGG | 0.319184 | tig0031177:+33007 | None:intergenic |
| TCGAGAAGCTTTACTATAGA+TGG | 0.322150 | tig0031177:+34113 | None:intergenic |
| CAGAAAACGGTGCGTTGTTA+TGG | 0.325198 | tig0031177:-34138 | Msa1445800:exon |
| AAAACCAATACAGGTTCTTC+TGG | 0.332997 | tig0031177:-33040 | Msa1445800:CDS |
| TCCCTTTCTGCAACTCATTC+GGG | 0.333412 | tig0031177:-34244 | Msa1445800:intron |
| GATCCACCTGGCATTCTCTT+AGG | 0.334735 | tig0031177:+32515 | None:intergenic |
| AAAAGAAAACAAATAATTTC+AGG | 0.335646 | tig0031177:+27437 | None:intergenic |
| TTGAACATTGATGTTATTGT+AGG | 0.343474 | tig0031177:-27385 | Msa1445800:three_prime_UTR |
| CCGATACAAGAGTGATGATT+TGG | 0.364244 | tig0031177:+28159 | None:intergenic |
| TTGAGGACGGTGGTTCCGTC+AGG | 0.366477 | tig0031177:+34467 | None:intergenic |
| AGCCGGACAAAATGTTCTTT+AGG | 0.366896 | tig0031177:+33208 | None:intergenic |
| GCATACTGAGATTGTTCATT+GGG | 0.368010 | tig0031177:+33546 | None:intergenic |
| CCTGCATTACTACAAGAAAA+AGG | 0.372170 | tig0031177:+27275 | None:intergenic |
| CAACAGCGGCTAGGAAATTT+GGG | 0.376940 | tig0031177:-28273 | Msa1445800:intron |
| ACTGATATCCATAGTTGAAT+AGG | 0.377720 | tig0031177:+32862 | None:intergenic |
| TTTGTGCTCCTTCCTGATGA+TGG | 0.388806 | tig0031177:+29613 | None:intergenic |
| CAGATCCCAACTAGCACTTC+TGG | 0.390772 | tig0031177:-31184 | Msa1445800:CDS |
| AACTTCTGTAGATAACATAT+CGG | 0.393159 | tig0031177:-27518 | Msa1445800:intron |
| GTAATGCATTGTAGGTGAAC+AGG | 0.394225 | tig0031177:-29816 | Msa1445800:intron |
| TGAGATTGTTGATGAGAAAC+AGG | 0.395078 | tig0031177:+33636 | None:intergenic |
| TAATTCTGGTCAAAATGAAC+AGG | 0.399230 | tig0031177:-32312 | Msa1445800:CDS |
| TGAAACTCGACTGTCATCCT+TGG | 0.401173 | tig0031177:+30770 | None:intergenic |
| GATCTGGTTGAGATGCAAAA+TGG | 0.404769 | tig0031177:+32177 | None:intergenic |
| GAGGATGAAACTATGCATTC+AGG | 0.420773 | tig0031177:-34083 | Msa1445800:CDS |
| TTCTTGTACTAATGAAGAAC+CGG | 0.426067 | tig0031177:-27343 | Msa1445800:three_prime_UTR |
| TGGCAGCCCGAGCTGCTGTT+GGG | 0.426995 | tig0031177:-29756 | Msa1445800:CDS |
| TTTGCCAAGAATTTGAAGTT+TGG | 0.427441 | tig0031177:+32459 | None:intergenic |
| GAAACAAAAGGTGTCATCTC+TGG | 0.429956 | tig0031177:-30972 | Msa1445800:CDS |
| TCGGGATGGTGATATGCATC+AGG | 0.432266 | tig0031177:-27499 | Msa1445800:three_prime_UTR |
| TGTTAGTGGTGTTGATCTTA+GGG | 0.434851 | tig0031177:-30915 | Msa1445800:intron |
| CATAATTAGAATGTCAAAAC+AGG | 0.436843 | tig0031177:-30370 | Msa1445800:intron |
| GGAGAGATTCGTCTTGTGAT+TGG | 0.437581 | tig0031177:+33673 | None:intergenic |
| TTTAGCTCCGTTTCGGAAGA+AGG | 0.439250 | tig0031177:+33771 | None:intergenic |
| CATCATTTATCTAAGTTGCA+TGG | 0.441846 | tig0031177:-32347 | Msa1445800:CDS |
| TGCTCAATAGAAAGGTCATT+AGG | 0.442499 | tig0031177:+32380 | None:intergenic |
| TTGACTAACAGCAATAGAAC+TGG | 0.444515 | tig0031177:+32781 | None:intergenic |
| AATTGATGGCTGAGCAAGCC+AGG | 0.445191 | tig0031177:-29708 | Msa1445800:CDS |
| TGAGCCAACCTATTCAACTA+TGG | 0.449243 | tig0031177:-32870 | Msa1445800:CDS |
| CCAAGTCAATCGTAGTAAAC+AGG | 0.449254 | tig0031177:-33469 | Msa1445800:intron |
| CCTGAGTTCCCAAGCGAAGT+TGG | 0.451526 | tig0031177:+29562 | None:intergenic |
| CGCAAATCTTCACCATCATC+AGG | 0.452328 | tig0031177:-29625 | Msa1445800:CDS |
| AACACAGTAAAGTTTGAAAC+CGG | 0.455501 | tig0031177:+27324 | None:intergenic |
| AATGATGTTACGGCTGTTAG+TGG | 0.455727 | tig0031177:-30929 | Msa1445800:CDS |
| ACATTTCTATGTTTGAATGC+AGG | 0.456397 | tig0031177:+27251 | None:intergenic |
| GTATAGGTAGAGGGTAGTTC+CGG | 0.456726 | tig0031177:-29952 | Msa1445800:intron |
| CCGGCTTATGAAAGGGATTG+TGG | 0.457315 | tig0031177:-33191 | Msa1445800:CDS |
| TGCATACTGAGATTGTTCAT+TGG | 0.459463 | tig0031177:+33545 | None:intergenic |
| ACATCAGCAGAACAAAATTC+GGG | 0.460150 | tig0031177:-32437 | Msa1445800:CDS |
| AGAAAAGGTCCAACTTCGCT+TGG | 0.461318 | tig0031177:-29571 | Msa1445800:CDS |
| TGCTCTCAGATTTGTGAGAA+GGG | 0.462901 | tig0031177:-34389 | Msa1445800:five_prime_UTR |
| TGACACCAGAAGTGCTAGTT+GGG | 0.464008 | tig0031177:+31179 | None:intergenic |
| CCAGACTGACTGTCAAAATC+AGG | 0.465391 | tig0031177:-33823 | Msa1445800:CDS |
| CTGCTCTCAGATTTGTGAGA+AGG | 0.465476 | tig0031177:-34390 | Msa1445800:five_prime_UTR |
| AAGCCAGGCAGAAGCGTGAA+GGG | 0.465558 | tig0031177:-29693 | Msa1445800:CDS |
| ATTAACAAAAGTGCAACAAC+AGG | 0.467853 | tig0031177:-33146 | Msa1445800:intron |
| AGCAAATCATGACAATGAAT+AGG | 0.467989 | tig0031177:-30209 | Msa1445800:CDS |
| CCTGTTTACTACGATTGACT+TGG | 0.469413 | tig0031177:+33469 | None:intergenic |
| TAGGAAAGCAAGGGAAGAGT+GGG | 0.469487 | tig0031177:-30190 | Msa1445800:CDS |
| TGATCAGCTTAATGATGTTA+CGG | 0.473692 | tig0031177:-30939 | Msa1445800:CDS |
| ATCATTTATCTAAGTTGCAT+GGG | 0.476789 | tig0031177:-32346 | Msa1445800:CDS |
| CACAAAAGATAATCAAGAAA+AGG | 0.477074 | tig0031177:-29596 | Msa1445800:CDS |
| CTGTCCAGAAGAACCTGTAT+TGG | 0.477865 | tig0031177:+33036 | None:intergenic |
| TTCTGTATCGGTTCCACGAC+AGG | 0.479567 | tig0031177:+33738 | None:intergenic |
| ATACATTTCCCATCGACATA+TGG | 0.479887 | tig0031177:-32701 | Msa1445800:CDS |
| GAAACTCGACTGTCATCCTT+GGG | 0.480685 | tig0031177:+30771 | None:intergenic |
| CGGCTTATGAAAGGGATTGT+GGG | 0.481586 | tig0031177:-33190 | Msa1445800:CDS |
| CTTACAGAGACAGTTGGATC+TGG | 0.481792 | tig0031177:+32161 | None:intergenic |
| GTTCTTCCCCTCCTCCTCCA+AGG | 0.485579 | tig0031177:-31096 | Msa1445800:intron |
| GTGGCAGCCCGAGCTGCTGT+TGG | 0.487103 | tig0031177:-29757 | Msa1445800:CDS |
| AATCAAGAAAAGGAGAGAAA+AGG | 0.491500 | tig0031177:-29586 | Msa1445800:CDS |
| ACCCGAATGAGTTGCAGAAA+GGG | 0.493430 | tig0031177:+34243 | None:intergenic |
| GCAGCAGATGAGTAATCAAC+AGG | 0.495484 | tig0031177:-33517 | Msa1445800:CDS |
| AGTCACGATTTCCGTTCTCT+TGG | 0.495553 | tig0031177:-34268 | Msa1445800:five_prime_UTR |
| GCGAATCGGTGCCGTGGAAG+CGG | 0.498023 | tig0031177:+34412 | None:intergenic |
| CTGAAGAAGCATTATGAGAA+TGG | 0.503259 | tig0031177:+32909 | None:intergenic |
| GAGGGTAGTTCCGGAGTTGA+TGG | 0.505527 | tig0031177:-29943 | Msa1445800:CDS |
| CTACGATTGACTTGGCCACT+CGG | 0.505916 | tig0031177:+33477 | None:intergenic |
| GAAGGATGTAATTGCAGTCT+TGG | 0.506286 | tig0031177:-28200 | Msa1445800:CDS |
| CTCCTTGTCACCATCAACTC+CGG | 0.506910 | tig0031177:+29933 | None:intergenic |
| CGAGAAGCTTTACTATAGAT+GGG | 0.507279 | tig0031177:+34114 | None:intergenic |
| ATGACTCACCTTGGAGGAGG+AGG | 0.509496 | tig0031177:+31088 | None:intergenic |
| TATGTTGCTGCTCAATAGAA+AGG | 0.510539 | tig0031177:+32372 | None:intergenic |
| GATGAGAAACAGGTAAAGTC+TGG | 0.511928 | tig0031177:+33646 | None:intergenic |
| ATCTGGTTGAGATGCAAAAT+GGG | 0.513802 | tig0031177:+32178 | None:intergenic |
| GCCAGGCAGAAGCGTGAAGG+GGG | 0.513828 | tig0031177:-29691 | Msa1445800:CDS |
| GCTGTCAAAGTGGCAATTGA+TGG | 0.514119 | tig0031177:-29722 | Msa1445800:CDS |
| ATAGGAAAGCAAGGGAAGAG+TGG | 0.515038 | tig0031177:-30191 | Msa1445800:CDS |
| GATGAGTAATCAACAGGCCT+CGG | 0.515163 | tig0031177:-33511 | Msa1445800:CDS |
| TCGATTCAAAGCAGCTTGGA+AGG | 0.517710 | tig0031177:+34046 | None:intergenic |
| ATTTAATGATCCCCATGCAT+TGG | 0.518932 | tig0031177:-32969 | Msa1445800:CDS |
| ATCCTACAGTAAGAAACAAA+AGG | 0.523762 | tig0031177:-30984 | Msa1445800:intron |
| GAAAAGGTCCAACTTCGCTT+GGG | 0.524007 | tig0031177:-29570 | Msa1445800:CDS |
| CACTGCCTCCATATGTCGAT+GGG | 0.524966 | tig0031177:+32693 | None:intergenic |
| GGTCAAAATGAACAGGGTAG+TGG | 0.525556 | tig0031177:-32305 | Msa1445800:CDS |
| CAAGCCAGGCAGAAGCGTGA+AGG | 0.525670 | tig0031177:-29694 | Msa1445800:CDS |
| TCATTAAGCTGATCAATGCT+TGG | 0.527111 | tig0031177:+30947 | None:intergenic |
| CCAAATCATCACTCTTGTAT+CGG | 0.528182 | tig0031177:-28159 | Msa1445800:CDS |
| CAGGGTAGTGGCATCAATCA+AGG | 0.532553 | tig0031177:-32293 | Msa1445800:CDS |
| CCAACTTCGCTTGGGAACTC+AGG | 0.532682 | tig0031177:-29562 | Msa1445800:intron |
| GATACAGAATGTTGCCTCAC+AGG | 0.538041 | tig0031177:-33724 | Msa1445800:CDS |
| GTGACCGAGTGTGGCTTGAA+AGG | 0.539175 | tig0031177:-30539 | Msa1445800:CDS |
| TGTCTCGACCTCCGCTTCCA+CGG | 0.539291 | tig0031177:-34423 | Msa1445800:five_prime_UTR |
| GGCAGCCCGAGCTGCTGTTG+GGG | 0.539687 | tig0031177:-29755 | Msa1445800:CDS |
| ATGACACCAGAAGTGCTAGT+TGG | 0.539850 | tig0031177:+31178 | None:intergenic |
| CAAATCTGAGAGCAGCGAAT+CGG | 0.540788 | tig0031177:+34398 | None:intergenic |
| TACCCGAATGAGTTGCAGAA+AGG | 0.542529 | tig0031177:+34242 | None:intergenic |
| AAGAAACCACTTGAGGCACT+TGG | 0.542539 | tig0031177:-31118 | Msa1445800:CDS |
| AATGATCCTAAGAGAATGCC+AGG | 0.542547 | tig0031177:-32521 | Msa1445800:CDS |
| AGGCTGAAACAGAAAAGCTC+CGG | 0.543349 | tig0031177:-30158 | Msa1445800:CDS |
| TAACAGTTGGCATCCTTACA+GGG | 0.543436 | tig0031177:+33008 | None:intergenic |
| CACCTTTCTGATTCTGACGC+AGG | 0.544987 | tig0031177:-33996 | Msa1445800:intron |
| GGGGACAATATATATAAGAA+AGG | 0.546181 | tig0031177:-34355 | Msa1445800:five_prime_UTR |
| GAATCATGAGGATGAGGTTG+TGG | 0.546439 | tig0031177:+32614 | None:intergenic |
| TGAGGACGGTGGTTCCGTCA+GGG | 0.546593 | tig0031177:+34468 | None:intergenic |
| CGAGGAACTAGTGGTTGTCC+CGG | 0.549173 | tig0031177:+32649 | None:intergenic |
| AAGGTCTGAACTCTGAAAAG+AGG | 0.549675 | tig0031177:-34336 | Msa1445800:five_prime_UTR |
| CCATCGACATATGGAGGCAG+TGG | 0.550413 | tig0031177:-32692 | Msa1445800:CDS |
| TCTGATACTCCAACCGAATG+AGG | 0.551257 | tig0031177:-28118 | Msa1445800:intron |
| GATGCAGTTGTGCCAATGCA+TGG | 0.551349 | tig0031177:+32957 | None:intergenic |
| ATTAAGGCCTTGCATGTGAA+CGG | 0.551684 | tig0031177:+32742 | None:intergenic |
| ACTTCTGTAGATAACATATC+GGG | 0.551854 | tig0031177:-27517 | Msa1445800:intron |
| TGACAATGAATAGGAAAGCA+AGG | 0.552373 | tig0031177:-30200 | Msa1445800:CDS |
| CAAATTCCACATCAGAGCAT+TGG | 0.558546 | tig0031177:-32581 | Msa1445800:CDS |
| AGCCAGGCAGAAGCGTGAAG+GGG | 0.558774 | tig0031177:-29692 | Msa1445800:CDS |
| CCACAATCCCTTTCATAAGC+CGG | 0.559179 | tig0031177:+33191 | None:intergenic |
| ATGCAGTTGTGCCAATGCAT+GGG | 0.559800 | tig0031177:+32958 | None:intergenic |
| GACTCACCTTGGAGGAGGAG+GGG | 0.560269 | tig0031177:+31090 | None:intergenic |
| GGAAGCGGAGGTCGAGACAA+AGG | 0.561164 | tig0031177:+34427 | None:intergenic |
| TTCTTTAGCATCCACTAGCA+TGG | 0.561413 | tig0031177:-32243 | Msa1445800:CDS |
| GCTCTCAGATTTGTGAGAAG+GGG | 0.561945 | tig0031177:-34388 | Msa1445800:five_prime_UTR |
| CCACTGCCTCCATATGTCGA+TGG | 0.565191 | tig0031177:+32692 | None:intergenic |
| AATACTATGACTCACCTTGG+AGG | 0.566673 | tig0031177:+31082 | None:intergenic |
| TGACGGAACCACCGTCCTCA+AGG | 0.566756 | tig0031177:-34465 | Msa1445800:five_prime_UTR |
| AGCTCGTAGCATCTCTGTGA+AGG | 0.567233 | tig0031177:-28218 | Msa1445800:CDS |
| AGAGCAACCTTCTTCCGAAA+CGG | 0.567565 | tig0031177:-33778 | Msa1445800:CDS |
| AAACAGGTAAAGTCTGGCGT+TGG | 0.568838 | tig0031177:+33652 | None:intergenic |
| GAGTGTGGCTTGAAAGGCAT+GGG | 0.570129 | tig0031177:-30533 | Msa1445800:CDS |
| TTGTAACTTACAGAGACAGT+TGG | 0.570686 | tig0031177:+32155 | None:intergenic |
| AGAGCAGCGAATCGGTGCCG+TGG | 0.572019 | tig0031177:+34406 | None:intergenic |
| GTTCCACTGGAAGTAACAGT+TGG | 0.572792 | tig0031177:+32995 | None:intergenic |
| TGACTCACCTTGGAGGAGGA+GGG | 0.573210 | tig0031177:+31089 | None:intergenic |
| CATCAATCAAGGCACTGTAA+AGG | 0.575497 | tig0031177:-32282 | Msa1445800:CDS |
| ATATCCATAGTTGAATAGGT+TGG | 0.576764 | tig0031177:+32866 | None:intergenic |
| GCTGCTTTGAATCGAGACAT+TGG | 0.579443 | tig0031177:-34038 | Msa1445800:CDS |
| TCTTGTATCGGATGCATGAG+AGG | 0.581093 | tig0031177:-28147 | Msa1445800:CDS |
| TCTTGTTGCCAACAGCGGCT+AGG | 0.582888 | tig0031177:-28282 | Msa1445800:intron |
| GCAGCCCGAGCTGCTGTTGG+GGG | 0.585228 | tig0031177:-29754 | Msa1445800:CDS |
| AGGTTGGCTCACTCTTCACT+TGG | 0.586167 | tig0031177:+32882 | None:intergenic |
| GAAGCGGAGGTCGAGACAAA+GGG | 0.586256 | tig0031177:+34428 | None:intergenic |
| GGCTTATGAAAGGGATTGTG+GGG | 0.586396 | tig0031177:-33189 | Msa1445800:CDS |
| AGATCCGCCGTTCACATGCA+AGG | 0.588053 | tig0031177:-32749 | Msa1445800:CDS |
| ATGCCAACTGTTACTTCCAG+TGG | 0.588289 | tig0031177:-32998 | Msa1445800:CDS |
| GGGAAGTAGATGACAAAATG+AGG | 0.590649 | tig0031177:-29795 | Msa1445800:CDS |
| CATGCCTTTCAAGCCACACT+CGG | 0.591412 | tig0031177:+30535 | None:intergenic |
| AAGAGTTGTCCAAGAAGAGG+AGG | 0.596851 | tig0031177:-30736 | Msa1445800:CDS |
| GGTTTCTTCTGGCCAAGAGG+AGG | 0.597345 | tig0031177:+31133 | None:intergenic |
| TCGAGAAAGTGAGTCCATCA+TGG | 0.597496 | tig0031177:+27298 | None:intergenic |
| TCGAAGAGTTGTCCAAGAAG+AGG | 0.598509 | tig0031177:-30739 | Msa1445800:CDS |
| AAAACCACAAGCACCTGTCG+TGG | 0.599323 | tig0031177:-33751 | Msa1445800:CDS |
| AATCGGTGCCGTGGAAGCGG+AGG | 0.599424 | tig0031177:+34415 | None:intergenic |
| TGTGAGGCAACATTCTGTAT+CGG | 0.599712 | tig0031177:+33726 | None:intergenic |
| ACTATGACTCACCTTGGAGG+AGG | 0.599837 | tig0031177:+31085 | None:intergenic |
| AGTGATGATTTGGACATCTG+AGG | 0.600102 | tig0031177:+28169 | None:intergenic |
| ATGTAATTGCAGTCTTGGAG+AGG | 0.600412 | tig0031177:-28195 | Msa1445800:CDS |
| GCTTTGAATCGAGACATTGG+CGG | 0.603368 | tig0031177:-34035 | Msa1445800:CDS |
| GGTTCCACGACAGGTGCTTG+TGG | 0.603738 | tig0031177:+33747 | None:intergenic |
| TGTGGAAAGATGCTTGTCAC+TGG | 0.604950 | tig0031177:-30504 | Msa1445800:intron |
| ACAGCAATAGAACTGGATGT+TGG | 0.608628 | tig0031177:+32788 | None:intergenic |
| GAAAGATGACGAGGAACTAG+TGG | 0.609193 | tig0031177:+32640 | None:intergenic |
| TGTCTCGATTCAAAGCAGCT+TGG | 0.610765 | tig0031177:+34042 | None:intergenic |
| GACAATGAATAGGAAAGCAA+GGG | 0.612242 | tig0031177:-30199 | Msa1445800:CDS |
| ATGTGTGAATCATGAGGATG+AGG | 0.613072 | tig0031177:+32608 | None:intergenic |
| GAGGACAAATGCTGCAAATG+TGG | 0.613322 | tig0031177:-29776 | Msa1445800:CDS |
| TAATGCATTGTAGGTGAACA+GGG | 0.617187 | tig0031177:-29815 | Msa1445800:intron |
| TCGACATATGGAGGCAGTGG+TGG | 0.618314 | tig0031177:-32689 | Msa1445800:CDS |
| CGGGATGGTGATATGCATCA+GGG | 0.619936 | tig0031177:-27498 | Msa1445800:three_prime_UTR |
| TGTTGTATGTGCCATGCTAG+TGG | 0.619948 | tig0031177:+32232 | None:intergenic |
| TGGTTGTCGTGACTCGAAGT+CGG | 0.622100 | tig0031177:+33843 | None:intergenic |
| TGTAATTGCAGTCTTGGAGA+GGG | 0.622189 | tig0031177:-28194 | Msa1445800:CDS |
| AGTGGTTTCTTCTGGCCAAG+AGG | 0.622436 | tig0031177:+31130 | None:intergenic |
| CAGAAAGGGAACCAAGAGAA+CGG | 0.623251 | tig0031177:+34257 | None:intergenic |
| TACCTGCGTCAGAATCAGAA+AGG | 0.624319 | tig0031177:+33994 | None:intergenic |
| CAGTGGAAGCTCCTTGAGGA+CGG | 0.625702 | tig0031177:+34454 | None:intergenic |
| TTCCGGAGTTGATGGTGACA+AGG | 0.629596 | tig0031177:-29935 | Msa1445800:CDS |
| CATTTCCCATCGACATATGG+AGG | 0.629878 | tig0031177:-32698 | Msa1445800:CDS |
| CAGGGTTTAGGATAACTTCG+CGG | 0.631806 | tig0031177:+34486 | None:intergenic |
| GGTGACAAGGAGAAAGATGA+GGG | 0.632650 | tig0031177:-29922 | Msa1445800:CDS |
| TTTAGACCAATGCTCTGATG+TGG | 0.636526 | tig0031177:+32575 | None:intergenic |
| ACTCGGTTGTTCATTGACCG+AGG | 0.640052 | tig0031177:+33494 | None:intergenic |
| AGCATTGGTCTAAATCACTT+AGG | 0.640112 | tig0031177:-32566 | Msa1445800:CDS |
| GAGATGACATGCTGTCAAAG+TGG | 0.640207 | tig0031177:-29732 | Msa1445800:CDS |
| TGGTGACAAGGAGAAAGATG+AGG | 0.641020 | tig0031177:-29923 | Msa1445800:CDS |
| GTCGAGACAAAGGGAAACAG+TGG | 0.643365 | tig0031177:+34437 | None:intergenic |
| GGGTCGTAATAAAGCAACAA+AGG | 0.644402 | tig0031177:-29902 | Msa1445800:intron |
| CCAGGCAGAAGCGTGAAGGG+GGG | 0.644805 | tig0031177:-29690 | Msa1445800:CDS |
| AATCTTCACCATCATCAGGA+AGG | 0.645878 | tig0031177:-29621 | Msa1445800:CDS |
| ATCCTCATGATTCACACATG+AGG | 0.646639 | tig0031177:-32604 | Msa1445800:CDS |
| CTGTAGATAACATATCGGGA+TGG | 0.651021 | tig0031177:-27513 | Msa1445800:intron |
| AACAGTTGGCATCCTTACAG+GGG | 0.656796 | tig0031177:+33009 | None:intergenic |
| CGAGTGTGGCTTGAAAGGCA+TGG | 0.656819 | tig0031177:-30534 | Msa1445800:CDS |
| GAAGAACCAAGTGCCTCAAG+TGG | 0.657729 | tig0031177:+31112 | None:intergenic |
| GAAAGGCATGGGTAATGATG+TGG | 0.658786 | tig0031177:-30522 | Msa1445800:CDS |
| TGCAGTTGTGCCAATGCATG+GGG | 0.662938 | tig0031177:+32959 | None:intergenic |
| ACTCGAACATCATGTTCCTG+AGG | 0.664605 | tig0031177:+32830 | None:intergenic |
| AAAGCTTCTCGAAGACGATG+AGG | 0.666719 | tig0031177:-34102 | Msa1445800:CDS |
| ATGTTGGCAGTGACCGAGTG+TGG | 0.669170 | tig0031177:-30548 | Msa1445800:intron |
| TGGCCAGAAGAAACCACTTG+AGG | 0.672577 | tig0031177:-31125 | Msa1445800:CDS |
| GAAACAGTGGAAGCTCCTTG+AGG | 0.674497 | tig0031177:+34450 | None:intergenic |
| AAGATTACTTGCATCCTGTG+AGG | 0.677122 | tig0031177:+33710 | None:intergenic |
| ACAGTCGACACAGATCCACC+TGG | 0.678732 | tig0031177:+32503 | None:intergenic |
| AATTCTGGTCAAAATGAACA+GGG | 0.683557 | tig0031177:-32311 | Msa1445800:CDS |
| AATTAATGTTCAGTGTGTGG+AGG | 0.687983 | tig0031177:-30418 | Msa1445800:intron |
| TGACTCGAAGTCGGCCACGT+TGG | 0.691017 | tig0031177:+33852 | None:intergenic |
| ACAGTTGGCATCCTTACAGG+GGG | 0.692028 | tig0031177:+33010 | None:intergenic |
| GAAGTTATCCTAAACCCTGA+CGG | 0.692113 | tig0031177:-34482 | Msa1445800:five_prime_UTR |
| TTGTGGTCTGAAAGATGACG+AGG | 0.696332 | tig0031177:+32631 | None:intergenic |
| AGGTGGATCTGTGTCGACTG+TGG | 0.697165 | tig0031177:-32501 | Msa1445800:CDS |
| TGGAAGCTCCTTGAGGACGG+TGG | 0.700442 | tig0031177:+34457 | None:intergenic |
| TGTGTGGAGGAAAGAATGCG+TGG | 0.701022 | tig0031177:-30405 | Msa1445800:CDS |
| AAGGCCTTGCATGTGAACGG+CGG | 0.702296 | tig0031177:+32745 | None:intergenic |
| TGCCTCATGTGTGAATCATG+AGG | 0.714630 | tig0031177:+32602 | None:intergenic |
| ATATTGAGAAAACAAGACAT+CGG | 0.724469 | tig0031177:-30257 | Msa1445800:CDS |
| GCTTATGAAAGGGATTGTGG+GGG | 0.734401 | tig0031177:-33188 | Msa1445800:CDS |
| GATCCTAAGAGAATGCCAGG+TGG | 0.746632 | tig0031177:-32518 | Msa1445800:CDS |
| TCGGTCAATGAACAACCGAG+TGG | 0.755898 | tig0031177:-33492 | Msa1445800:CDS |
| TCAGTCAATCATTACCAACG+TGG | 0.781874 | tig0031177:-33866 | Msa1445800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCATATTACTAAAAATTT+TGG | - | tig0031177:28440-28459 | Msa1445800:intron | 10.0% |
| !! | TATTAAGATATCATTAAAAA+CGG | + | tig0031177:30455-30474 | None:intergenic | 10.0% |
| !! | TAAATATAAATAACTAAATG+TGG | - | tig0031177:33143-33162 | Msa1445800:intron | 10.0% |
| !!! | ATTGCTTCATTTTTTTTTTA+AGG | - | tig0031177:27810-27829 | Msa1445800:intron | 15.0% |
| !!! | AACTTTATTTAACAAATTGA+AGG | - | tig0031177:28334-28353 | Msa1445800:intron | 15.0% |
| !! | TATATTATCAGATCTAAATA+GGG | - | tig0031177:30074-30093 | Msa1445800:intron | 15.0% |
| !!! | TTGTTCATTTTTTTTTTTCT+GGG | - | tig0031177:30658-30677 | Msa1445800:intron | 15.0% |
| !! | TGTAACAAATATTGAAATAT+GGG | + | tig0031177:31245-31264 | None:intergenic | 15.0% |
| !! | TTGTAACAAATATTGAAATA+TGG | + | tig0031177:31246-31265 | None:intergenic | 15.0% |
| !! | AAATTTACAAATTGACATAA+AGG | + | tig0031177:31402-31421 | None:intergenic | 15.0% |
| !! | ACTTACTAAATTTGAATATT+AGG | + | tig0031177:32358-32377 | None:intergenic | 15.0% |
| !!! | ATATTTTATTTTACCTCATT+CGG | + | tig0031177:33611-33630 | None:intergenic | 15.0% |
| !! | AAAAGAAAACAAATAATTTC+AGG | + | tig0031177:34279-34298 | None:intergenic | 15.0% |
| !! | ATAAATATAAATCACAACAG+AGG | + | tig0031177:27521-27540 | None:intergenic | 20.0% |
| !! | TTTATTTAACAAATTGAAGG+TGG | - | tig0031177:28337-28356 | Msa1445800:intron | 20.0% |
| !! | TTATTTAACAAATTGAAGGT+GGG | - | tig0031177:28338-28357 | Msa1445800:intron | 20.0% |
| !!! | AGAATAGATGTTTTTTCTTA+AGG | - | tig0031177:28595-28614 | Msa1445800:intron | 20.0% |
| !! | ATGAAACAAAAAAGAACATT+TGG | + | tig0031177:29646-29665 | None:intergenic | 20.0% |
| !!! | AAATGTTCTTTTTTGTTTCA+TGG | - | tig0031177:29645-29664 | Msa1445800:CDS | 20.0% |
| !! | TTCACAAAATTATAACGATA+GGG | + | tig0031177:29731-29750 | None:intergenic | 20.0% |
| !! | TTTCACAAAATTATAACGAT+AGG | + | tig0031177:29732-29751 | None:intergenic | 20.0% |
| !! | AAAGAAAACAAAACAAGAAA+AGG | + | tig0031177:29806-29825 | None:intergenic | 20.0% |
| !!! | TTTTTGTTCTTTTGATTTAG+AGG | - | tig0031177:29824-29843 | Msa1445800:intron | 20.0% |
| !! | AATAATCAAGAGTCAATTTA+TGG | - | tig0031177:30048-30067 | Msa1445800:intron | 20.0% |
| !! | CTATATTATCAGATCTAAAT+AGG | - | tig0031177:30073-30092 | Msa1445800:intron | 20.0% |
| !! | CTAACCTAATAAAATTGAAA+AGG | + | tig0031177:30505-30524 | None:intergenic | 20.0% |
| !!! | CTTGTTCATTTTTTTTTTTC+TGG | - | tig0031177:30657-30676 | Msa1445800:intron | 20.0% |
| !!! | CTTTTCTGTTTTAAAATTTC+AGG | - | tig0031177:30867-30886 | Msa1445800:intron | 20.0% |
| !!! | TTTTTGTGTTCTCTTTTTAT+AGG | - | tig0031177:30893-30912 | Msa1445800:intron | 20.0% |
| !!! | TTTCAATATTTGTTACAAGT+AGG | - | tig0031177:31248-31267 | Msa1445800:intron | 20.0% |
| !!! | GGAATTTAATTTTTGTATAG+TGG | - | tig0031177:31614-31633 | Msa1445800:intron | 20.0% |
| !!! | TAATGCTATTTTTTGAGTAT+AGG | - | tig0031177:31745-31764 | Msa1445800:intron | 20.0% |
| !! | TAAGTTAGTTCAATATATAC+TGG | + | tig0031177:32496-32515 | None:intergenic | 20.0% |
| !!! | AACTAACTTATAAGTTGTTT+TGG | - | tig0031177:32506-32525 | Msa1445800:CDS | 20.0% |
| !! | AAAAAATTGAGGAAGAAAAT+TGG | - | tig0031177:33050-33069 | Msa1445800:intron | 20.0% |
| !! | AAACTGTTGTTAAACAAAAA+AGG | + | tig0031177:33182-33201 | None:intergenic | 20.0% |
| !! | ATGAGGTAAAATAAAATATC+TGG | - | tig0031177:33612-33631 | Msa1445800:CDS | 20.0% |
| !! | TGAGGTAAAATAAAATATCT+GGG | - | tig0031177:33613-33632 | Msa1445800:CDS | 20.0% |
| !!! | GTTTTCTTTATAATATAACC+TGG | - | tig0031177:33827-33846 | Msa1445800:CDS | 20.0% |
| !! | AAATATAATTGGAAATATCC+AGG | + | tig0031177:33848-33867 | None:intergenic | 20.0% |
| !! | TGGATATTTCCAATTATATT+TGG | - | tig0031177:33847-33866 | Msa1445800:CDS | 20.0% |
| !! | TTTCCAATTATATTTGGATT+TGG | - | tig0031177:33853-33872 | Msa1445800:CDS | 20.0% |
| !!! | TAATTTCTTTGAAGCTAATT+AGG | + | tig0031177:33887-33906 | None:intergenic | 20.0% |
| ! | AAATTCTGAATTGCAGAAAA+CGG | - | tig0031177:27562-27581 | Msa1445800:intron | 25.0% |
| ! | TTAATCACATTCATACATAG+TGG | - | tig0031177:27780-27799 | Msa1445800:intron | 25.0% |
| !!! | ATAGATGTTTTTTCTTAAGG+TGG | - | tig0031177:28598-28617 | Msa1445800:intron | 25.0% |
| !! | ATCATTAAATTTTGTTCCAC+TGG | + | tig0031177:28734-28753 | None:intergenic | 25.0% |
| !!! | CTTTTTTACATATGAAGTAG+AGG | + | tig0031177:29310-29329 | None:intergenic | 25.0% |
| ! | CTCTACTTCATATGTAAAAA+AGG | - | tig0031177:29308-29327 | Msa1445800:intron | 25.0% |
| ! | ATCATTTATCTAAGTTGCAT+GGG | - | tig0031177:29367-29386 | Msa1445800:intron | 25.0% |
| !! | TATTTGATCCCCAAAATTTT+AGG | + | tig0031177:29619-29638 | None:intergenic | 25.0% |
| ! | TCACAAAATTATAACGATAG+GGG | + | tig0031177:29730-29749 | None:intergenic | 25.0% |
| ! | GTTACTCTCTATTAAAGAAT+AGG | + | tig0031177:30284-30303 | None:intergenic | 25.0% |
| !! | CTTTAAAAAGTAGCATGAAA+TGG | + | tig0031177:30331-30350 | None:intergenic | 25.0% |
| !!! | ATGCTACTTTTTAAAGCATT+TGG | - | tig0031177:30335-30354 | Msa1445800:intron | 25.0% |
| ! | ACCTAATAAAATTGAAAAGG+AGG | + | tig0031177:30502-30521 | None:intergenic | 25.0% |
| ! | ATATTGAAGAAAACCATAGT+TGG | - | tig0031177:30835-30854 | Msa1445800:intron | 25.0% |
| ! | TATTGAAGAAAACCATAGTT+GGG | - | tig0031177:30836-30855 | Msa1445800:intron | 25.0% |
| ! | ATCTAGATAAGTTTGAAGAA+TGG | + | tig0031177:31101-31120 | None:intergenic | 25.0% |
| ! | AACTTATCTAGATATGTACT+TGG | - | tig0031177:31108-31127 | Msa1445800:CDS | 25.0% |
| ! | ACTTATCTAGATATGTACTT+GGG | - | tig0031177:31109-31128 | Msa1445800:CDS | 25.0% |
| ! | CATAATTAGAATGTCAAAAC+AGG | - | tig0031177:31343-31362 | Msa1445800:intron | 25.0% |
| ! | ATATTGAGAAAACAAGACAT+CGG | - | tig0031177:31456-31475 | Msa1445800:intron | 25.0% |
| !!! | GTTTTAAATGATAAGCACAT+AGG | + | tig0031177:31721-31740 | None:intergenic | 25.0% |
| !!! | TATTTTTTGAGTATAGGTAG+AGG | - | tig0031177:31751-31770 | Msa1445800:intron | 25.0% |
| !!! | ATTTTTTGAGTATAGGTAGA+GGG | - | tig0031177:31752-31771 | Msa1445800:intron | 25.0% |
| ! | ATGACTTTCCACATATATAA+AGG | + | tig0031177:31867-31886 | None:intergenic | 25.0% |
| !!! | TTTTATTGGTAATGCATTGT+AGG | - | tig0031177:31889-31908 | Msa1445800:intron | 25.0% |
| ! | CACAAAAGATAATCAAGAAA+AGG | - | tig0031177:32117-32136 | Msa1445800:intron | 25.0% |
| ! | TATATTCAAACTAGTTAGTC+AGG | - | tig0031177:32248-32267 | Msa1445800:CDS | 25.0% |
| !!! | CAATATATACTGGTTGATTT+TGG | + | tig0031177:32486-32505 | None:intergenic | 25.0% |
| ! | GTGCTGTGATATTTATAATA+GGG | + | tig0031177:32759-32778 | None:intergenic | 25.0% |
| ! | TGTGCTGTGATATTTATAAT+AGG | + | tig0031177:32760-32779 | None:intergenic | 25.0% |
| !!! | CTTTTTTAAACACTTGCATT+CGG | - | tig0031177:32874-32893 | Msa1445800:CDS | 25.0% |
| ! | AATTGCAAAATAGATTCTTG+AGG | - | tig0031177:33024-33043 | Msa1445800:CDS | 25.0% |
| ! | GTGATGATCAATTGTATAAA+TGG | - | tig0031177:33077-33096 | Msa1445800:intron | 25.0% |
| !!! | GCTCTTGTTAATATGTTTTT+TGG | - | tig0031177:33111-33130 | Msa1445800:intron | 25.0% |
| !! | AAGACTTTTTATGCATGTTT+AGG | + | tig0031177:33284-33303 | None:intergenic | 25.0% |
| ! | GATTGATCAATGACATTAAT+TGG | - | tig0031177:33782-33801 | Msa1445800:CDS | 25.0% |
| !! | TTTGAAGCTAATTAGGAAAT+GGG | + | tig0031177:33880-33899 | None:intergenic | 25.0% |
| !! | TTTTGACAGTGAAATTAAGA+TGG | + | tig0031177:34062-34081 | None:intergenic | 25.0% |
| ! | AACTTCTGTAGATAACATAT+CGG | - | tig0031177:34195-34214 | Msa1445800:intron | 25.0% |
| ! | TTGAACATTGATGTTATTGT+AGG | - | tig0031177:34328-34347 | Msa1445800:five_prime_UTR | 25.0% |
| ! | CATTAGTACAAGAAAAAAGT+TGG | + | tig0031177:34364-34383 | None:intergenic | 25.0% |
| GGGGACAATATATATAAGAA+AGG | - | tig0031177:27358-27377 | Msa1445800:three_prime_UTR | 30.0% | |
| !!! | TCTTGCTGTTGTTCAATTTT+AGG | + | tig0031177:27918-27937 | None:intergenic | 30.0% |
| ATTGCCTCGTTGTTAAAAAT+GGG | + | tig0031177:28134-28153 | None:intergenic | 30.0% | |
| CAAACTTTAGTAGTTTAGCA+CGG | + | tig0031177:28407-28426 | None:intergenic | 30.0% | |
| ! | TACCTAAAGAACATTTTGTC+CGG | - | tig0031177:28503-28522 | Msa1445800:intron | 30.0% |
| ! | ATTAACAAAAGTGCAACAAC+AGG | - | tig0031177:28567-28586 | Msa1445800:intron | 30.0% |
| ATATCCATAGTTGAATAGGT+TGG | + | tig0031177:28850-28869 | None:intergenic | 30.0% | |
| ACTGATATCCATAGTTGAAT+AGG | + | tig0031177:28854-28873 | None:intergenic | 30.0% | |
| ! | TTTGCCAAGAATTTGAAGTT+TGG | + | tig0031177:29257-29276 | None:intergenic | 30.0% |
| AACATCAGCAGAACAAAATT+CGG | - | tig0031177:29275-29294 | Msa1445800:intron | 30.0% | |
| CATCATTTATCTAAGTTGCA+TGG | - | tig0031177:29366-29385 | Msa1445800:intron | 30.0% | |
| ! | TTTTGACCAGAATTAACAGA+AGG | + | tig0031177:29396-29415 | None:intergenic | 30.0% |
| TAATTCTGGTCAAAATGAAC+AGG | - | tig0031177:29401-29420 | Msa1445800:intron | 30.0% | |
| AATTCTGGTCAAAATGAACA+GGG | - | tig0031177:29402-29421 | Msa1445800:intron | 30.0% | |
| !! | GTAAAGGATGAATTTTCAAG+AGG | - | tig0031177:29447-29466 | Msa1445800:intron | 30.0% |
| ! | AGAAGTAGTGCCTAAAATTT+TGG | - | tig0031177:29606-29625 | Msa1445800:CDS | 30.0% |
| ! | GAAGTAGTGCCTAAAATTTT+GGG | - | tig0031177:29607-29626 | Msa1445800:CDS | 30.0% |
| ! | AAGTAGTGCCTAAAATTTTG+GGG | - | tig0031177:29608-29627 | Msa1445800:CDS | 30.0% |
| CAAGCAGATTAATACTGTTT+GGG | + | tig0031177:29687-29706 | None:intergenic | 30.0% | |
| TCAAGCAGATTAATACTGTT+TGG | + | tig0031177:29688-29707 | None:intergenic | 30.0% | |
| CACAAAATTATAACGATAGG+GGG | + | tig0031177:29729-29748 | None:intergenic | 30.0% | |
| !! | GATTAGTTTCAATCAGTTCT+TGG | + | tig0031177:30010-30029 | None:intergenic | 30.0% |
| ! | CAAGCCTATAATTTTACGTT+AGG | - | tig0031177:30303-30322 | Msa1445800:intron | 30.0% |
| GGAACCTAACGTAAAATTAT+AGG | + | tig0031177:30310-30329 | None:intergenic | 30.0% | |
| ! | GCCTCCTTTTCAATTTTATT+AGG | - | tig0031177:30498-30517 | Msa1445800:intron | 30.0% |
| ATCCTACAGTAAGAAACAAA+AGG | - | tig0031177:30729-30748 | Msa1445800:CDS | 30.0% | |
| TGATCAGCTTAATGATGTTA+CGG | - | tig0031177:30774-30793 | Msa1445800:CDS | 30.0% | |
| ! | TTGTGTTCTCTTTTTATAGG+AGG | - | tig0031177:30896-30915 | Msa1445800:intron | 30.0% |
| !! | AGGAAGAACAGTTATTTTCT+GGG | - | tig0031177:30919-30938 | Msa1445800:CDS | 30.0% |
| ! | TCAATCAATTTTCTCTGCAA+TGG | + | tig0031177:31026-31045 | None:intergenic | 30.0% |
| GACAGAGTAATGACATAAAT+AGG | + | tig0031177:31060-31079 | None:intergenic | 30.0% | |
| ATGGCAAAAACAAAATCAGA+TGG | + | tig0031177:31082-31101 | None:intergenic | 30.0% | |
| AACAGCTATAAGGTTTACAT+AGG | + | tig0031177:31135-31154 | None:intergenic | 30.0% | |
| GACAAAATACAACAGCTATA+AGG | + | tig0031177:31145-31164 | None:intergenic | 30.0% | |
| TAGGATTCCATGTAATCTAA+CGG | - | tig0031177:31267-31286 | Msa1445800:intron | 30.0% | |
| GAAAATTAATGTTCAGTGTG+TGG | - | tig0031177:31292-31311 | Msa1445800:intron | 30.0% | |
| AGCAAATCATGACAATGAAT+AGG | - | tig0031177:31504-31523 | Msa1445800:intron | 30.0% | |
| GCAATTCACCTTTATATATG+TGG | - | tig0031177:31856-31875 | Msa1445800:intron | 30.0% | |
| !! | GTGGAAAGTCATGTTTTTAT+TGG | - | tig0031177:31875-31894 | Msa1445800:intron | 30.0% |
| AATCAAGAAAAGGAGAGAAA+AGG | - | tig0031177:32127-32146 | Msa1445800:intron | 30.0% | |
| CAGAAAAGAAAAAACAACAC+TGG | - | tig0031177:32605-32624 | Msa1445800:CDS | 30.0% | |
| !!! | AATATGTTTTTTGGCTCAAG+TGG | - | tig0031177:33120-33139 | Msa1445800:intron | 30.0% |
| AATAAAACTTTATAGCCCCA+TGG | - | tig0031177:33323-33342 | Msa1445800:intron | 30.0% | |
| CACACATATTGTATTGTATC+TGG | + | tig0031177:33352-33371 | None:intergenic | 30.0% | |
| TTTGGGAAAAATCATTCTCA+TGG | - | tig0031177:33457-33476 | Msa1445800:intron | 30.0% | |
| !!! | TTTATTTTACCTCATTCGGT+TGG | + | tig0031177:33607-33626 | None:intergenic | 30.0% |
| AGCACAATGGTAATATAAAC+AGG | + | tig0031177:33648-33667 | None:intergenic | 30.0% | |
| GGACCAAATCCAAATATAAT+TGG | + | tig0031177:33859-33878 | None:intergenic | 30.0% | |
| !! | CTTTGAAGCTAATTAGGAAA+TGG | + | tig0031177:33881-33900 | None:intergenic | 30.0% |
| TCTTGTATGCATTTCACTAT+AGG | - | tig0031177:33936-33955 | Msa1445800:intron | 30.0% | |
| CTTGTATGCATTTCACTATA+GGG | - | tig0031177:33937-33956 | Msa1445800:intron | 30.0% | |
| TGTTTCAATCTCCAAATGTT+TGG | - | tig0031177:34125-34144 | Msa1445800:exon | 30.0% | |
| ATGTTATCTACAGAAGTTTG+AGG | + | tig0031177:34193-34212 | None:intergenic | 30.0% | |
| ACTTCTGTAGATAACATATC+GGG | - | tig0031177:34196-34215 | Msa1445800:intron | 30.0% | |
| AAGAAAAAAGTTGGAAAAGC+AGG | + | tig0031177:34355-34374 | None:intergenic | 30.0% | |
| TTCTTGTACTAATGAAGAAC+CGG | - | tig0031177:34370-34389 | Msa1445800:five_prime_UTR | 30.0% | |
| ! | AACACAGTAAAGTTTGAAAC+CGG | + | tig0031177:34392-34411 | None:intergenic | 30.0% |
| ACATTTCTATGTTTGAATGC+AGG | + | tig0031177:34465-34484 | None:intergenic | 30.0% | |
| ATAAATCACAACAGAGGAAC+AGG | + | tig0031177:27515-27534 | None:intergenic | 35.0% | |
| CGAGAAGCTTTACTATAGAT+GGG | + | tig0031177:27602-27621 | None:intergenic | 35.0% | |
| TCGAGAAGCTTTACTATAGA+TGG | + | tig0031177:27603-27622 | None:intergenic | 35.0% | |
| ! | TGAGATTGTTGATGAGAAAC+AGG | + | tig0031177:28080-28099 | None:intergenic | 35.0% |
| !! | AGATCCCATTTTTAACAACG+AGG | - | tig0031177:28127-28146 | Msa1445800:CDS | 35.0% |
| GATTGCCTCGTTGTTAAAAA+TGG | + | tig0031177:28135-28154 | None:intergenic | 35.0% | |
| GCATACTGAGATTGTTCATT+GGG | + | tig0031177:28170-28189 | None:intergenic | 35.0% | |
| TGCATACTGAGATTGTTCAT+TGG | + | tig0031177:28171-28190 | None:intergenic | 35.0% | |
| GAAGTTGGGGAATCAATATA+GGG | + | tig0031177:28289-28308 | None:intergenic | 35.0% | |
| ! | AAAGGACATGATAGTGAAAC+TGG | + | tig0031177:28373-28392 | None:intergenic | 35.0% |
| !! | CTACTAAAGTTTGTTGTGCA+AGG | - | tig0031177:28414-28433 | Msa1445800:intron | 35.0% |
| ! | ATTTTGTCCGGCTTATGAAA+GGG | - | tig0031177:28515-28534 | Msa1445800:intron | 35.0% |
| TTTGTCTGCAAGAAAAAGGA+CGG | + | tig0031177:28655-28674 | None:intergenic | 35.0% | |
| ! | GGTTTTTGTCTGCAAGAAAA+AGG | + | tig0031177:28659-28678 | None:intergenic | 35.0% |
| TTGCAGACAAAAACCAATAC+AGG | - | tig0031177:28664-28683 | Msa1445800:intron | 35.0% | |
| AAAACCAATACAGGTTCTTC+TGG | - | tig0031177:28673-28692 | Msa1445800:intron | 35.0% | |
| ATTTAATGATCCCCATGCAT+TGG | - | tig0031177:28744-28763 | Msa1445800:intron | 35.0% | |
| !! | CTGAAGAAGCATTATGAGAA+TGG | + | tig0031177:28807-28826 | None:intergenic | 35.0% |
| TATCAGTGCTAAAAAACCTC+AGG | - | tig0031177:28867-28886 | Msa1445800:intron | 35.0% | |
| TTGACTAACAGCAATAGAAC+TGG | + | tig0031177:28935-28954 | None:intergenic | 35.0% | |
| ATACATTTCCCATCGACATA+TGG | - | tig0031177:29012-29031 | Msa1445800:intron | 35.0% | |
| !! | AGCATTGGTCTAAATCACTT+AGG | - | tig0031177:29147-29166 | Msa1445800:intron | 35.0% |
| CACACCAAACTTCAAATTCT+TGG | - | tig0031177:29250-29269 | Msa1445800:intron | 35.0% | |
| ACATCAGCAGAACAAAATTC+GGG | - | tig0031177:29276-29295 | Msa1445800:intron | 35.0% | |
| TGCTCAATAGAAAGGTCATT+AGG | + | tig0031177:29336-29355 | None:intergenic | 35.0% | |
| TATGTTGCTGCTCAATAGAA+AGG | + | tig0031177:29344-29363 | None:intergenic | 35.0% | |
| ATCTGGTTGAGATGCAAAAT+GGG | + | tig0031177:29538-29557 | None:intergenic | 35.0% | |
| TTGTAACTTACAGAGACAGT+TGG | + | tig0031177:29561-29580 | None:intergenic | 35.0% | |
| !! | AAGACGTCTTTTTGAGAGAT+TGG | - | tig0031177:29756-29775 | Msa1445800:CDS | 35.0% |
| !! | AGACGTCTTTTTGAGAGATT+GGG | - | tig0031177:29757-29776 | Msa1445800:CDS | 35.0% |
| CTAGGATTTGTAGCTTCTAA+CGG | - | tig0031177:30100-30119 | Msa1445800:intron | 35.0% | |
| TAATACTCTCTCCACATGAA+GGG | + | tig0031177:30134-30153 | None:intergenic | 35.0% | |
| TTAATACTCTCTCCACATGA+AGG | + | tig0031177:30135-30154 | None:intergenic | 35.0% | |
| !! | TCATGTGGAGAGAGTATTAA+AGG | - | tig0031177:30135-30154 | Msa1445800:intron | 35.0% |
| !! | TGGAGAGAGTATTAAAGGAT+AGG | - | tig0031177:30140-30159 | Msa1445800:intron | 35.0% |
| GGAATCAACTAACTTTCAGT+TGG | + | tig0031177:30263-30282 | None:intergenic | 35.0% | |
| CAAAATACTATGACTCACCT+TGG | + | tig0031177:30637-30656 | None:intergenic | 35.0% | |
| !! | CACCTTTTGTTTCTTACTGT+AGG | + | tig0031177:30734-30753 | None:intergenic | 35.0% |
| TCATTAAGCTGATCAATGCT+TGG | + | tig0031177:30769-30788 | None:intergenic | 35.0% | |
| !! | TGTTAGTGGTGTTGATCTTA+GGG | - | tig0031177:30798-30817 | Msa1445800:CDS | 35.0% |
| AAAGTATGTGTTCCCAACTA+TGG | + | tig0031177:30851-30870 | None:intergenic | 35.0% | |
| ! | TGTTCTCTTTTTATAGGAGG+AGG | - | tig0031177:30899-30918 | Msa1445800:intron | 35.0% |
| !! | GAGGAAGAACAGTTATTTTC+TGG | - | tig0031177:30918-30937 | Msa1445800:CDS | 35.0% |
| ! | GCTGTTGTATTTTGTCATGT+TGG | - | tig0031177:31149-31168 | Msa1445800:CDS | 35.0% |
| ! | TTTTCAGCCGTTAGATTACA+TGG | + | tig0031177:31277-31296 | None:intergenic | 35.0% |
| AATTAATGTTCAGTGTGTGG+AGG | - | tig0031177:31295-31314 | Msa1445800:intron | 35.0% | |
| TGACAATGAATAGGAAAGCA+AGG | - | tig0031177:31513-31532 | Msa1445800:intron | 35.0% | |
| GACAATGAATAGGAAAGCAA+GGG | - | tig0031177:31514-31533 | Msa1445800:intron | 35.0% | |
| ! | AACCCACATCATTTAGTTTC+CGG | + | tig0031177:31577-31596 | None:intergenic | 35.0% |
| AATTCCACAAAGCGACAAAA+TGG | + | tig0031177:31600-31619 | None:intergenic | 35.0% | |
| ! | TTTTGTCCTTGCACATTTCT+TGG | - | tig0031177:31652-31671 | Msa1445800:intron | 35.0% |
| TTTGTCCTTGCACATTTCTT+GGG | - | tig0031177:31653-31672 | Msa1445800:intron | 35.0% | |
| TAATGCATTGTAGGTGAACA+GGG | - | tig0031177:31898-31917 | Msa1445800:intron | 35.0% | |
| ACACTTTCCTTGCATAAAAG+CGG | - | tig0031177:32401-32420 | Msa1445800:CDS | 35.0% | |
| ACCAAAGTCTGAATGAAACT+AGG | - | tig0031177:32432-32451 | Msa1445800:CDS | 35.0% | |
| TCCTAGTTTCATTCAGACTT+TGG | + | tig0031177:32436-32455 | None:intergenic | 35.0% | |
| TCTTGAGGCAGAAAAAATTG+AGG | - | tig0031177:33039-33058 | Msa1445800:CDS | 35.0% | |
| ACAATGTAATCAGAACATGG+GGG | + | tig0031177:33379-33398 | None:intergenic | 35.0% | |
| CACAATGTAATCAGAACATG+GGG | + | tig0031177:33380-33399 | None:intergenic | 35.0% | |
| GCACAATGTAATCAGAACAT+GGG | + | tig0031177:33381-33400 | None:intergenic | 35.0% | |
| TGCACAATGTAATCAGAACA+TGG | + | tig0031177:33382-33401 | None:intergenic | 35.0% | |
| CCAAATCATCACTCTTGTAT+CGG | - | tig0031177:33554-33573 | Msa1445800:CDS | 35.0% | |
| ! | TAAGATGAGAGAAAGCACAA+TGG | + | tig0031177:33661-33680 | None:intergenic | 35.0% |
| GACATTAATTGGTCACAAGT+TGG | - | tig0031177:33793-33812 | Msa1445800:CDS | 35.0% | |
| CATTTCACTATAGGGTAACA+TGG | - | tig0031177:33945-33964 | Msa1445800:intron | 35.0% | |
| ! | GAAATTTGAGGTTTGAAGCT+GGG | - | tig0031177:34002-34021 | Msa1445800:CDS | 35.0% |
| ! | TTGTTACATGCTGCAGTTTT+TGG | + | tig0031177:34308-34327 | None:intergenic | 35.0% |
| ! | TTTACTGTGTTTTGCCATGA+TGG | - | tig0031177:34401-34420 | Msa1445800:five_prime_UTR | 35.0% |
| CCTGCATTACTACAAGAAAA+AGG | + | tig0031177:34441-34460 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTTGTAGTAATGC+AGG | - | tig0031177:34438-34457 | Msa1445800:five_prime_UTR | 35.0% |
| GAAGTTATCCTAAACCCTGA+CGG | - | tig0031177:27231-27250 | Msa1445800:three_prime_UTR | 40.0% | |
| TGCTCTCAGATTTGTGAGAA+GGG | - | tig0031177:27324-27343 | Msa1445800:three_prime_UTR | 40.0% | |
| ! | AAGGTCTGAACTCTGAAAAG+AGG | - | tig0031177:27377-27396 | Msa1445800:three_prime_UTR | 40.0% |
| ! | GTGACTTTTGTGTGTGTATC+TGG | + | tig0031177:27431-27450 | None:intergenic | 40.0% |
| TTCCCTTTCTGCAACTCATT+CGG | - | tig0031177:27468-27487 | Msa1445800:three_prime_UTR | 40.0% | |
| GAGGATGAAACTATGCATTC+AGG | - | tig0031177:27630-27649 | Msa1445800:intron | 40.0% | |
| TCAGTCAATCATTACCAACG+TGG | - | tig0031177:27847-27866 | Msa1445800:intron | 40.0% | |
| !!! | TTGTGGTTTTAGCTCCGTTT+CGG | + | tig0031177:27952-27971 | None:intergenic | 40.0% |
| TGTGAGGCAACATTCTGTAT+CGG | + | tig0031177:27990-28009 | None:intergenic | 40.0% | |
| AAGATTACTTGCATCCTGTG+AGG | + | tig0031177:28006-28025 | None:intergenic | 40.0% | |
| GATGAGAAACAGGTAAAGTC+TGG | + | tig0031177:28070-28089 | None:intergenic | 40.0% | |
| CCTGTTTACTACGATTGACT+TGG | + | tig0031177:28247-28266 | None:intergenic | 40.0% | |
| CCAAGTCAATCGTAGTAAAC+AGG | - | tig0031177:28244-28263 | Msa1445800:CDS | 40.0% | |
| CGTAGTAAACAGGTACCATT+TGG | - | tig0031177:28254-28273 | Msa1445800:CDS | 40.0% | |
| GGAAGTTGGGGAATCAATAT+AGG | + | tig0031177:28290-28309 | None:intergenic | 40.0% | |
| AGCCGGACAAAATGTTCTTT+AGG | + | tig0031177:28508-28527 | None:intergenic | 40.0% | |
| ! | CATTTTGTCCGGCTTATGAA+AGG | - | tig0031177:28514-28533 | Msa1445800:intron | 40.0% |
| ! | ACAAAAGTGCAACAACAGGT+AGG | - | tig0031177:28571-28590 | Msa1445800:intron | 40.0% |
| TAACAGTTGGCATCCTTACA+GGG | + | tig0031177:28708-28727 | None:intergenic | 40.0% | |
| TGAGCCAACCTATTCAACTA+TGG | - | tig0031177:28843-28862 | Msa1445800:intron | 40.0% | |
| ACAGCAATAGAACTGGATGT+TGG | + | tig0031177:28928-28947 | None:intergenic | 40.0% | |
| ATTAAGGCCTTGCATGTGAA+CGG | + | tig0031177:28974-28993 | None:intergenic | 40.0% | |
| !!! | GGTAACTACAGCCATTTTTC+CGG | - | tig0031177:29045-29064 | Msa1445800:intron | 40.0% |
| !!! | GTAACTACAGCCATTTTTCC+GGG | - | tig0031177:29046-29065 | Msa1445800:intron | 40.0% |
| ATGTGTGAATCATGAGGATG+AGG | + | tig0031177:29108-29127 | None:intergenic | 40.0% | |
| ATCCTCATGATTCACACATG+AGG | - | tig0031177:29109-29128 | Msa1445800:intron | 40.0% | |
| CAAATTCCACATCAGAGCAT+TGG | - | tig0031177:29132-29151 | Msa1445800:intron | 40.0% | |
| TTTAGACCAATGCTCTGATG+TGG | + | tig0031177:29141-29160 | None:intergenic | 40.0% | |
| AATGATCCTAAGAGAATGCC+AGG | - | tig0031177:29192-29211 | Msa1445800:intron | 40.0% | |
| !! | CATCAATCAAGGCACTGTAA+AGG | - | tig0031177:29431-29450 | Msa1445800:intron | 40.0% |
| TTCTTTAGCATCCACTAGCA+TGG | - | tig0031177:29470-29489 | Msa1445800:intron | 40.0% | |
| GCAAAATGGGAAGCAGTATT+TGG | + | tig0031177:29525-29544 | None:intergenic | 40.0% | |
| GATCTGGTTGAGATGCAAAA+TGG | + | tig0031177:29539-29558 | None:intergenic | 40.0% | |
| TCAGTCTCTCACAAAACAGT+TGG | - | tig0031177:30234-30253 | Msa1445800:CDS | 40.0% | |
| AAGCCATTGTTCTGTTTGCA+AGG | - | tig0031177:30417-30436 | Msa1445800:intron | 40.0% | |
| AGCCATTGTTCTGTTTGCAA+GGG | - | tig0031177:30418-30437 | Msa1445800:intron | 40.0% | |
| !!! | CCAAGAGGAGGTTTTTTTAG+TGG | + | tig0031177:30571-30590 | None:intergenic | 40.0% |
| CCACTAAAAAAACCTCCTCT+TGG | - | tig0031177:30568-30587 | Msa1445800:intron | 40.0% | |
| AATACTATGACTCACCTTGG+AGG | + | tig0031177:30634-30653 | None:intergenic | 40.0% | |
| !! | GAAACAAAAGGTGTCATCTC+TGG | - | tig0031177:30741-30760 | Msa1445800:CDS | 40.0% |
| AATGATGTTACGGCTGTTAG+TGG | - | tig0031177:30784-30803 | Msa1445800:CDS | 40.0% | |
| !! | CTGTTAGTGGTGTTGATCTT+AGG | - | tig0031177:30797-30816 | Msa1445800:CDS | 40.0% |
| ! | TCCGATAATTTTCCTACCAG+CGG | - | tig0031177:31429-31448 | Msa1445800:intron | 40.0% |
| ! | TTTTCTCAATATCAACCCGC+TGG | + | tig0031177:31448-31467 | None:intergenic | 40.0% |
| CTCCGGAAACTAAATGATGT+GGG | - | tig0031177:31572-31591 | Msa1445800:intron | 40.0% | |
| ! | TTTTGCACCGCAGATTCAAA+CGG | - | tig0031177:31694-31713 | Msa1445800:intron | 40.0% |
| GGGTCGTAATAAAGCAACAA+AGG | - | tig0031177:31811-31830 | Msa1445800:intron | 40.0% | |
| GTAATGCATTGTAGGTGAAC+AGG | - | tig0031177:31897-31916 | Msa1445800:intron | 40.0% | |
| GGGAAGTAGATGACAAAATG+AGG | - | tig0031177:31918-31937 | Msa1445800:intron | 40.0% | |
| AATCTTCACCATCATCAGGA+AGG | - | tig0031177:32092-32111 | Msa1445800:intron | 40.0% | |
| ! | AACTCAGGTGCGTTTCTTTT+TGG | - | tig0031177:32166-32185 | Msa1445800:CDS | 40.0% |
| ! | GCTTTTATGCAAGGAAAGTG+TGG | + | tig0031177:32402-32421 | None:intergenic | 40.0% |
| !! | TGCTTTACCGCTTTTATGCA+AGG | + | tig0031177:32411-32430 | None:intergenic | 40.0% |
| AGTCTGAATGAAACTAGGAG+AGG | - | tig0031177:32437-32456 | Msa1445800:CDS | 40.0% | |
| !! | TACTGGTTGATTTTGGACGA+AGG | + | tig0031177:32479-32498 | None:intergenic | 40.0% |
| !! | TGGTTGATTTTGGATGAAGG+CGG | - | tig0031177:32536-32555 | Msa1445800:CDS | 40.0% |
| ! | CAGCACAGTACTGAAAAGAT+TGG | - | tig0031177:32773-32792 | Msa1445800:CDS | 40.0% |
| GAAATCCAGTCGGAAGTAAT+TGG | - | tig0031177:32814-32833 | Msa1445800:CDS | 40.0% | |
| AATAAAAACAAACCCCCTGC+TGG | + | tig0031177:32987-33006 | None:intergenic | 40.0% | |
| TTCCCTGTGATCAAATTGTC+TGG | - | tig0031177:33232-33251 | Msa1445800:intron | 40.0% | |
| CTCCAGACAATTTGATCACA+GGG | + | tig0031177:33237-33256 | None:intergenic | 40.0% | |
| ACTCCAGACAATTTGATCAC+AGG | + | tig0031177:33238-33257 | None:intergenic | 40.0% | |
| TATTGTATCTGGAGACCATG+GGG | + | tig0031177:33341-33360 | None:intergenic | 40.0% | |
| GTATTGTATCTGGAGACCAT+GGG | + | tig0031177:33342-33361 | None:intergenic | 40.0% | |
| TGTATTGTATCTGGAGACCA+TGG | + | tig0031177:33343-33362 | None:intergenic | 40.0% | |
| GAAGGATGTAATTGCAGTCT+TGG | - | tig0031177:33513-33532 | Msa1445800:CDS | 40.0% | |
| ATGTAATTGCAGTCTTGGAG+AGG | - | tig0031177:33518-33537 | Msa1445800:CDS | 40.0% | |
| TGTAATTGCAGTCTTGGAGA+GGG | - | tig0031177:33519-33538 | Msa1445800:CDS | 40.0% | |
| ! | AGTGATGATTTGGACATCTG+AGG | + | tig0031177:33547-33566 | None:intergenic | 40.0% |
| CCGATACAAGAGTGATGATT+TGG | + | tig0031177:33557-33576 | None:intergenic | 40.0% | |
| TGCATACAAGAGAATGCAGA+GGG | + | tig0031177:33927-33946 | None:intergenic | 40.0% | |
| ATGCATACAAGAGAATGCAG+AGG | + | tig0031177:33928-33947 | None:intergenic | 40.0% | |
| TAAACTGAAACTCGTCACTG+AGG | - | tig0031177:33980-33999 | Msa1445800:intron | 40.0% | |
| ! | GGAAATTTGAGGTTTGAAGC+TGG | - | tig0031177:34001-34020 | Msa1445800:CDS | 40.0% |
| GTGAAATTAAGATGGAGCCA+GGG | + | tig0031177:34054-34073 | None:intergenic | 40.0% | |
| AGTGAAATTAAGATGGAGCC+AGG | + | tig0031177:34055-34074 | None:intergenic | 40.0% | |
| AATCTCCAAATGTTTGGTCG+AGG | - | tig0031177:34131-34150 | Msa1445800:exon | 40.0% | |
| CTGTAGATAACATATCGGGA+TGG | - | tig0031177:34200-34219 | Msa1445800:intron | 40.0% | |
| ! | CAGGGTTTAGGATAACTTCG+CGG | + | tig0031177:27230-27249 | None:intergenic | 45.0% |
| CAAATCTGAGAGCAGCGAAT+CGG | + | tig0031177:27318-27337 | None:intergenic | 45.0% | |
| CTGCTCTCAGATTTGTGAGA+AGG | - | tig0031177:27323-27342 | Msa1445800:three_prime_UTR | 45.0% | |
| GCTCTCAGATTTGTGAGAAG+GGG | - | tig0031177:27325-27344 | Msa1445800:three_prime_UTR | 45.0% | |
| !!! | TGTGAGAAGGGGTTTTGAGT+TGG | - | tig0031177:27336-27355 | Msa1445800:three_prime_UTR | 45.0% |
| !!! | GTGAGAAGGGGTTTTGAGTT+GGG | - | tig0031177:27337-27356 | Msa1445800:three_prime_UTR | 45.0% |
| !!! | TGAGAAGGGGTTTTGAGTTG+GGG | - | tig0031177:27338-27357 | Msa1445800:three_prime_UTR | 45.0% |
| AGTCACGATTTCCGTTCTCT+TGG | - | tig0031177:27445-27464 | Msa1445800:three_prime_UTR | 45.0% | |
| CAGAAAGGGAACCAAGAGAA+CGG | + | tig0031177:27459-27478 | None:intergenic | 45.0% | |
| TCCCTTTCTGCAACTCATTC+GGG | - | tig0031177:27469-27488 | Msa1445800:three_prime_UTR | 45.0% | |
| ACCCGAATGAGTTGCAGAAA+GGG | + | tig0031177:27473-27492 | None:intergenic | 45.0% | |
| TACCCGAATGAGTTGCAGAA+AGG | + | tig0031177:27474-27493 | None:intergenic | 45.0% | |
| CAGAAAACGGTGCGTTGTTA+TGG | - | tig0031177:27575-27594 | Msa1445800:intron | 45.0% | |
| AAAGCTTCTCGAAGACGATG+AGG | - | tig0031177:27611-27630 | Msa1445800:intron | 45.0% | |
| TCGATTCAAAGCAGCTTGGA+AGG | + | tig0031177:27670-27689 | None:intergenic | 45.0% | |
| TGTCTCGATTCAAAGCAGCT+TGG | + | tig0031177:27674-27693 | None:intergenic | 45.0% | |
| ! | GCTGCTTTGAATCGAGACAT+TGG | - | tig0031177:27675-27694 | Msa1445800:intron | 45.0% |
| ! | GCTTTGAATCGAGACATTGG+CGG | - | tig0031177:27678-27697 | Msa1445800:intron | 45.0% |
| TACCTGCGTCAGAATCAGAA+AGG | + | tig0031177:27722-27741 | None:intergenic | 45.0% | |
| !! | CCTGATTTTGACAGTCAGTC+TGG | + | tig0031177:27893-27912 | None:intergenic | 45.0% |
| CCAGACTGACTGTCAAAATC+AGG | - | tig0031177:27890-27909 | Msa1445800:intron | 45.0% | |
| AGAGCAACCTTCTTCCGAAA+CGG | - | tig0031177:27935-27954 | Msa1445800:intron | 45.0% | |
| ! | TTTAGCTCCGTTTCGGAAGA+AGG | + | tig0031177:27945-27964 | None:intergenic | 45.0% |
| GATACAGAATGTTGCCTCAC+AGG | - | tig0031177:27989-28008 | Msa1445800:intron | 45.0% | |
| GGAGAGATTCGTCTTGTGAT+TGG | + | tig0031177:28043-28062 | None:intergenic | 45.0% | |
| AAACAGGTAAAGTCTGGCGT+TGG | + | tig0031177:28064-28083 | None:intergenic | 45.0% | |
| GCAGCAGATGAGTAATCAAC+AGG | - | tig0031177:28196-28215 | Msa1445800:CDS | 45.0% | |
| GATGAGTAATCAACAGGCCT+CGG | - | tig0031177:28202-28221 | Msa1445800:CDS | 45.0% | |
| ATAGGGAGCAACAAGCCAAA+TGG | + | tig0031177:28272-28291 | None:intergenic | 45.0% | |
| ! | ATTGATTCCCCAACTTCCCA+AGG | - | tig0031177:28292-28311 | Msa1445800:intron | 45.0% |
| GTAGTTTAGCACGGCATAGA+GGG | + | tig0031177:28398-28417 | None:intergenic | 45.0% | |
| AGTAGTTTAGCACGGCATAG+AGG | + | tig0031177:28399-28418 | None:intergenic | 45.0% | |
| CCACAATCCCTTTCATAAGC+CGG | + | tig0031177:28525-28544 | None:intergenic | 45.0% | |
| CGGCTTATGAAAGGGATTGT+GGG | - | tig0031177:28523-28542 | Msa1445800:intron | 45.0% | |
| GGCTTATGAAAGGGATTGTG+GGG | - | tig0031177:28524-28543 | Msa1445800:intron | 45.0% | |
| GCTTATGAAAGGGATTGTGG+GGG | - | tig0031177:28525-28544 | Msa1445800:intron | 45.0% | |
| CTGTCCAGAAGAACCTGTAT+TGG | + | tig0031177:28680-28699 | None:intergenic | 45.0% | |
| AACAGTTGGCATCCTTACAG+GGG | + | tig0031177:28707-28726 | None:intergenic | 45.0% | |
| GTAACAGTTGGCATCCTTAC+AGG | + | tig0031177:28709-28728 | None:intergenic | 45.0% | |
| ! | ATGCCAACTGTTACTTCCAG+TGG | - | tig0031177:28715-28734 | Msa1445800:intron | 45.0% |
| GTTCCACTGGAAGTAACAGT+TGG | + | tig0031177:28721-28740 | None:intergenic | 45.0% | |
| ATGCAGTTGTGCCAATGCAT+GGG | + | tig0031177:28758-28777 | None:intergenic | 45.0% | |
| ACTCGAACATCATGTTCCTG+AGG | + | tig0031177:28886-28905 | None:intergenic | 45.0% | |
| ! | GCTGCTGTTGCTGCTTATTA+AGG | + | tig0031177:28990-29009 | None:intergenic | 45.0% |
| CATTTCCCATCGACATATGG+AGG | - | tig0031177:29015-29034 | Msa1445800:intron | 45.0% | |
| TAGTGGTTGTCCCGGAAAAA+TGG | + | tig0031177:29059-29078 | None:intergenic | 45.0% | |
| GAAAGATGACGAGGAACTAG+TGG | + | tig0031177:29076-29095 | None:intergenic | 45.0% | |
| TTGTGGTCTGAAAGATGACG+AGG | + | tig0031177:29085-29104 | None:intergenic | 45.0% | |
| GAATCATGAGGATGAGGTTG+TGG | + | tig0031177:29102-29121 | None:intergenic | 45.0% | |
| TGCCTCATGTGTGAATCATG+AGG | + | tig0031177:29114-29133 | None:intergenic | 45.0% | |
| GGGTTGCCTTCTGTTAATTC+TGG | - | tig0031177:29387-29406 | Msa1445800:intron | 45.0% | |
| GGTCAAAATGAACAGGGTAG+TGG | - | tig0031177:29408-29427 | Msa1445800:intron | 45.0% | |
| TGTTGTATGTGCCATGCTAG+TGG | + | tig0031177:29484-29503 | None:intergenic | 45.0% | |
| CTTACAGAGACAGTTGGATC+TGG | + | tig0031177:29555-29574 | None:intergenic | 45.0% | |
| CAGATCTAAATAGGGCTGCT+AGG | - | tig0031177:30082-30101 | Msa1445800:intron | 45.0% | |
| TGCCCTTGCAAACAGAACAA+TGG | + | tig0031177:30423-30442 | None:intergenic | 45.0% | |
| !! | TGACACCAGAAGTGCTAGTT+GGG | + | tig0031177:30537-30556 | None:intergenic | 45.0% |
| !! | ATGACACCAGAAGTGCTAGT+TGG | + | tig0031177:30538-30557 | None:intergenic | 45.0% |
| ! | AAGAAACCACTTGAGGCACT+TGG | - | tig0031177:30595-30614 | Msa1445800:intron | 45.0% |
| !! | ACAGTTATTTTCTGGGCCCA+AGG | - | tig0031177:30926-30945 | Msa1445800:CDS | 45.0% |
| GAAACTCGACTGTCATCCTT+GGG | + | tig0031177:30945-30964 | None:intergenic | 45.0% | |
| TGAAACTCGACTGTCATCCT+TGG | + | tig0031177:30946-30965 | None:intergenic | 45.0% | |
| TCGAAGAGTTGTCCAAGAAG+AGG | - | tig0031177:30974-30993 | Msa1445800:CDS | 45.0% | |
| AAGAGTTGTCCAAGAAGAGG+AGG | - | tig0031177:30977-30996 | Msa1445800:CDS | 45.0% | |
| TCAGACTTTCCTCCTCTTCT+TGG | + | tig0031177:30989-31008 | None:intergenic | 45.0% | |
| ! | GAAAGGCATGGGTAATGATG+TGG | - | tig0031177:31191-31210 | Msa1445800:CDS | 45.0% |
| TGTGGAAAGATGCTTGTCAC+TGG | - | tig0031177:31209-31228 | Msa1445800:intron | 45.0% | |
| CCCGCTGGTAGGAAAATTAT+CGG | + | tig0031177:31433-31452 | None:intergenic | 45.0% | |
| ! | CCGATAATTTTCCTACCAGC+GGG | - | tig0031177:31430-31449 | Msa1445800:intron | 45.0% |
| ATAGGAAAGCAAGGGAAGAG+TGG | - | tig0031177:31522-31541 | Msa1445800:intron | 45.0% | |
| TAGGAAAGCAAGGGAAGAGT+GGG | - | tig0031177:31523-31542 | Msa1445800:intron | 45.0% | |
| GGAAGAGTGGGAGAAAAAAC+AGG | - | tig0031177:31535-31554 | Msa1445800:intron | 45.0% | |
| AGGCTGAAACAGAAAAGCTC+CGG | - | tig0031177:31555-31574 | Msa1445800:intron | 45.0% | |
| GCTCCGGAAACTAAATGATG+TGG | - | tig0031177:31571-31590 | Msa1445800:intron | 45.0% | |
| !!! | GGTTCCATTTTGTCGCTTTG+TGG | - | tig0031177:31593-31612 | Msa1445800:intron | 45.0% |
| CATAGGTCCGTTTGAATCTG+CGG | + | tig0031177:31704-31723 | None:intergenic | 45.0% | |
| GTATAGGTAGAGGGTAGTTC+CGG | - | tig0031177:31761-31780 | Msa1445800:intron | 45.0% | |
| TGGTGACAAGGAGAAAGATG+AGG | - | tig0031177:31790-31809 | Msa1445800:intron | 45.0% | |
| GGTGACAAGGAGAAAGATGA+GGG | - | tig0031177:31791-31810 | Msa1445800:intron | 45.0% | |
| GAGGACAAATGCTGCAAATG+TGG | - | tig0031177:31937-31956 | Msa1445800:intron | 45.0% | |
| GAGATGACATGCTGTCAAAG+TGG | - | tig0031177:31981-32000 | Msa1445800:intron | 45.0% | |
| GCTGTCAAAGTGGCAATTGA+TGG | - | tig0031177:31991-32010 | Msa1445800:intron | 45.0% | |
| CGCAAATCTTCACCATCATC+AGG | - | tig0031177:32088-32107 | Msa1445800:intron | 45.0% | |
| TTTGTGCTCCTTCCTGATGA+TGG | + | tig0031177:32103-32122 | None:intergenic | 45.0% | |
| AGAAAAGGTCCAACTTCGCT+TGG | - | tig0031177:32142-32161 | Msa1445800:intron | 45.0% | |
| GAAAAGGTCCAACTTCGCTT+GGG | - | tig0031177:32143-32162 | Msa1445800:intron | 45.0% | |
| !! | GGTTGATTTTGGACGAAGGT+GGG | + | tig0031177:32475-32494 | None:intergenic | 45.0% |
| !! | TGGTTGATTTTGGACGAAGG+TGG | + | tig0031177:32476-32495 | None:intergenic | 45.0% |
| !!! | TAAGTTGTTTTGGAGCTCGC+TGG | - | tig0031177:32516-32535 | Msa1445800:CDS | 45.0% |
| !! | CGCTGGTTGATTTTGGATGA+AGG | - | tig0031177:32533-32552 | Msa1445800:CDS | 45.0% |
| !! | GGTTGATTTTGGATGAAGGC+GGG | - | tig0031177:32537-32556 | Msa1445800:CDS | 45.0% |
| TAGGAAGTTGGGCTCACTAA+TGG | - | tig0031177:32578-32597 | Msa1445800:CDS | 45.0% | |
| ! | CAGAAGCACAGAAATCCAGT+CGG | - | tig0031177:32804-32823 | Msa1445800:CDS | 45.0% |
| TACAGCCAATTACTTCCGAC+TGG | + | tig0031177:32822-32841 | None:intergenic | 45.0% | |
| ATATCACACATGTGCCAGCA+GGG | - | tig0031177:32970-32989 | Msa1445800:CDS | 45.0% | |
| CTGTTGGCAACAAGAACACA+GGG | + | tig0031177:33426-33445 | None:intergenic | 45.0% | |
| TGTGTTCTTGTTGCCAACAG+CGG | - | tig0031177:33426-33445 | Msa1445800:intron | 45.0% | |
| CAACAGCGGCTAGGAAATTT+GGG | - | tig0031177:33440-33459 | Msa1445800:intron | 45.0% | |
| TCTTGTATCGGATGCATGAG+AGG | - | tig0031177:33566-33585 | Msa1445800:CDS | 45.0% | |
| TCTGATACTCCAACCGAATG+AGG | - | tig0031177:33595-33614 | Msa1445800:CDS | 45.0% | |
| ATACAAGAGAATGCAGAGGG+TGG | + | tig0031177:33924-33943 | None:intergenic | 45.0% | |
| CTCGTCACTGAGGAAATTTG+AGG | - | tig0031177:33990-34009 | Msa1445800:intron | 45.0% | |
| TCCAAATGTTTGGTCGAGGT+GGG | - | tig0031177:34135-34154 | Msa1445800:exon | 45.0% | |
| TCGAGAAAGTGAGTCCATCA+TGG | + | tig0031177:34418-34437 | None:intergenic | 45.0% | |
| GAAACAGTGGAAGCTCCTTG+AGG | + | tig0031177:27266-27285 | None:intergenic | 50.0% | |
| GTCGAGACAAAGGGAAACAG+TGG | + | tig0031177:27279-27298 | None:intergenic | 50.0% | |
| !!! | GAGAAGGGGTTTTGAGTTGG+GGG | - | tig0031177:27339-27358 | Msa1445800:three_prime_UTR | 50.0% |
| CACCTTTCTGATTCTGACGC+AGG | - | tig0031177:27717-27736 | Msa1445800:intron | 50.0% | |
| TGGTTGTCGTGACTCGAAGT+CGG | + | tig0031177:27873-27892 | None:intergenic | 50.0% | |
| AAAACCACAAGCACCTGTCG+TGG | - | tig0031177:27962-27981 | Msa1445800:intron | 50.0% | |
| !! | TTCTGTATCGGTTCCACGAC+AGG | + | tig0031177:27978-27997 | None:intergenic | 50.0% |
| ACTCGGTTGTTCATTGACCG+AGG | + | tig0031177:28222-28241 | None:intergenic | 50.0% | |
| TCGGTCAATGAACAACCGAG+TGG | - | tig0031177:28221-28240 | Msa1445800:CDS | 50.0% | |
| !! | CTACGATTGACTTGGCCACT+CGG | + | tig0031177:28239-28258 | None:intergenic | 50.0% |
| AGTTGCATTGCCCTGTCCTT+GGG | + | tig0031177:28311-28330 | None:intergenic | 50.0% | |
| AAGTTGCATTGCCCTGTCCT+TGG | + | tig0031177:28312-28331 | None:intergenic | 50.0% | |
| AGCACGGCATAGAGGGAAAA+AGG | + | tig0031177:28391-28410 | None:intergenic | 50.0% | |
| CCGGCTTATGAAAGGGATTG+TGG | - | tig0031177:28522-28541 | Msa1445800:intron | 50.0% | |
| TTGTGGGGGATCAGATGCTT+AGG | - | tig0031177:28539-28558 | Msa1445800:intron | 50.0% | |
| ACAGTTGGCATCCTTACAGG+GGG | + | tig0031177:28706-28725 | None:intergenic | 50.0% | |
| TGCAGTTGTGCCAATGCATG+GGG | + | tig0031177:28757-28776 | None:intergenic | 50.0% | |
| GATGCAGTTGTGCCAATGCA+TGG | + | tig0031177:28759-28778 | None:intergenic | 50.0% | |
| ! | AGGTTGGCTCACTCTTCACT+TGG | + | tig0031177:28834-28853 | None:intergenic | 50.0% |
| CACTGCCTCCATATGTCGAT+GGG | + | tig0031177:29023-29042 | None:intergenic | 50.0% | |
| GATCCTAAGAGAATGCCAGG+TGG | - | tig0031177:29195-29214 | Msa1445800:intron | 50.0% | |
| GATCCACCTGGCATTCTCTT+AGG | + | tig0031177:29201-29220 | None:intergenic | 50.0% | |
| ! | CAGGGTAGTGGCATCAATCA+AGG | - | tig0031177:29420-29439 | Msa1445800:intron | 50.0% |
| CAGATCCCAACTAGCACTTC+TGG | - | tig0031177:30529-30548 | Msa1445800:CDS | 50.0% | |
| AGTGGTTTCTTCTGGCCAAG+AGG | + | tig0031177:30586-30605 | None:intergenic | 50.0% | |
| TGGCCAGAAGAAACCACTTG+AGG | - | tig0031177:30588-30607 | Msa1445800:intron | 50.0% | |
| GTGCCTCAAGTGGTTTCTTC+TGG | + | tig0031177:30594-30613 | None:intergenic | 50.0% | |
| GAAGAACCAAGTGCCTCAAG+TGG | + | tig0031177:30604-30623 | None:intergenic | 50.0% | |
| ACTATGACTCACCTTGGAGG+AGG | + | tig0031177:30631-30650 | None:intergenic | 50.0% | |
| CATGCCTTTCAAGCCACACT+CGG | + | tig0031177:31181-31200 | None:intergenic | 50.0% | |
| ! | GAGTGTGGCTTGAAAGGCAT+GGG | - | tig0031177:31180-31199 | Msa1445800:CDS | 50.0% |
| TGTGTGGAGGAAAGAATGCG+TGG | - | tig0031177:31308-31327 | Msa1445800:intron | 50.0% | |
| CTCAATATCAACCCGCTGGT+AGG | + | tig0031177:31444-31463 | None:intergenic | 50.0% | |
| GCATGCCCAAGAAATGTGCA+AGG | + | tig0031177:31661-31680 | None:intergenic | 50.0% | |
| !! | TTCCGGAGTTGATGGTGACA+AGG | - | tig0031177:31778-31797 | Msa1445800:intron | 50.0% |
| CTCCTTGTCACCATCAACTC+CGG | + | tig0031177:31783-31802 | None:intergenic | 50.0% | |
| ! | AATTGATGGCTGAGCAAGCC+AGG | - | tig0031177:32005-32024 | Msa1445800:intron | 50.0% |
| !! | TGGAGCTCGCTGGTTGATTT+TGG | - | tig0031177:32526-32545 | Msa1445800:CDS | 50.0% |
| AGAAGCCAGGAGTAGGAAGT+TGG | - | tig0031177:32566-32585 | Msa1445800:CDS | 50.0% | |
| GAAGCCAGGAGTAGGAAGTT+GGG | - | tig0031177:32567-32586 | Msa1445800:CDS | 50.0% | |
| CATATCACACATGTGCCAGC+AGG | - | tig0031177:32969-32988 | Msa1445800:CDS | 50.0% | |
| TATCACACATGTGCCAGCAG+GGG | - | tig0031177:32971-32990 | Msa1445800:CDS | 50.0% | |
| TGATCACAGGGAACACACGA+GGG | + | tig0031177:33225-33244 | None:intergenic | 50.0% | |
| TTGATCACAGGGAACACACG+AGG | + | tig0031177:33226-33245 | None:intergenic | 50.0% | |
| GCTGTTGGCAACAAGAACAC+AGG | + | tig0031177:33427-33446 | None:intergenic | 50.0% | |
| CCAAATTTCCTAGCCGCTGT+TGG | + | tig0031177:33442-33461 | None:intergenic | 50.0% | |
| CCAACAGCGGCTAGGAAATT+TGG | - | tig0031177:33439-33458 | Msa1445800:intron | 50.0% | |
| AGCTCGTAGCATCTCTGTGA+AGG | - | tig0031177:33495-33514 | Msa1445800:CDS | 50.0% | |
| AGGGATGCAACAGTGTCAAG+GGG | + | tig0031177:34035-34054 | None:intergenic | 50.0% | |
| CAGGGATGCAACAGTGTCAA+GGG | + | tig0031177:34036-34055 | None:intergenic | 50.0% | |
| CTCCAAATGTTTGGTCGAGG+TGG | - | tig0031177:34134-34153 | Msa1445800:exon | 50.0% | |
| ACCCACCTCGACCAAACATT+TGG | + | tig0031177:34139-34158 | None:intergenic | 50.0% | |
| TCGGGATGGTGATATGCATC+AGG | - | tig0031177:34214-34233 | Msa1445800:intron | 50.0% | |
| CGGGATGGTGATATGCATCA+GGG | - | tig0031177:34215-34234 | Msa1445800:intron | 50.0% | |
| CAGTGGAAGCTCCTTGAGGA+CGG | + | tig0031177:27262-27281 | None:intergenic | 55.0% | |
| GAAGCGGAGGTCGAGACAAA+GGG | + | tig0031177:27288-27307 | None:intergenic | 55.0% | |
| TTCCCCAACTTCCCAAGGAC+AGG | - | tig0031177:28297-28316 | Msa1445800:intron | 55.0% | |
| TCCCCAACTTCCCAAGGACA+GGG | - | tig0031177:28298-28317 | Msa1445800:intron | 55.0% | |
| TGCCCTGTCCTTGGGAAGTT+GGG | + | tig0031177:28303-28322 | None:intergenic | 55.0% | |
| TTGCCCTGTCCTTGGGAAGT+TGG | + | tig0031177:28304-28323 | None:intergenic | 55.0% | |
| AGATCCGCCGTTCACATGCA+AGG | - | tig0031177:28964-28983 | Msa1445800:intron | 55.0% | |
| AAGGCCTTGCATGTGAACGG+CGG | + | tig0031177:28971-28990 | None:intergenic | 55.0% | |
| CCACTGCCTCCATATGTCGA+TGG | + | tig0031177:29024-29043 | None:intergenic | 55.0% | |
| CCATCGACATATGGAGGCAG+TGG | - | tig0031177:29021-29040 | Msa1445800:intron | 55.0% | |
| TCGACATATGGAGGCAGTGG+TGG | - | tig0031177:29024-29043 | Msa1445800:intron | 55.0% | |
| CGAGGAACTAGTGGTTGTCC+CGG | + | tig0031177:29067-29086 | None:intergenic | 55.0% | |
| ACAGTCGACACAGATCCACC+TGG | + | tig0031177:29213-29232 | None:intergenic | 55.0% | |
| !! | AGGTGGATCTGTGTCGACTG+TGG | - | tig0031177:29212-29231 | Msa1445800:intron | 55.0% |
| CGGCATTCTCTCCCTTCATG+TGG | - | tig0031177:30120-30139 | Msa1445800:intron | 55.0% | |
| GGTTTCTTCTGGCCAAGAGG+AGG | + | tig0031177:30583-30602 | None:intergenic | 55.0% | |
| TGACTCACCTTGGAGGAGGA+GGG | + | tig0031177:30627-30646 | None:intergenic | 55.0% | |
| ATGACTCACCTTGGAGGAGG+AGG | + | tig0031177:30628-30647 | None:intergenic | 55.0% | |
| ATGTTGGCAGTGACCGAGTG+TGG | - | tig0031177:31165-31184 | Msa1445800:CDS | 55.0% | |
| GTGACCGAGTGTGGCTTGAA+AGG | - | tig0031177:31174-31193 | Msa1445800:CDS | 55.0% | |
| CGAGTGTGGCTTGAAAGGCA+TGG | - | tig0031177:31179-31198 | Msa1445800:CDS | 55.0% | |
| GAGGGTAGTTCCGGAGTTGA+TGG | - | tig0031177:31770-31789 | Msa1445800:intron | 55.0% | |
| ! | AAGCCAGGCAGAAGCGTGAA+GGG | - | tig0031177:32020-32039 | Msa1445800:intron | 55.0% |
| CCTGAGTTCCCAAGCGAAGT+TGG | + | tig0031177:32154-32173 | None:intergenic | 55.0% | |
| CCAACTTCGCTTGGGAACTC+AGG | - | tig0031177:32151-32170 | Msa1445800:intron | 55.0% | |
| GCAGTAGAGAAGCCAGGAGT+AGG | - | tig0031177:32559-32578 | Msa1445800:CDS | 55.0% | |
| TGAGCCCAACTTCCTACTCC+TGG | + | tig0031177:32574-32593 | None:intergenic | 55.0% | |
| ATCACACATGTGCCAGCAGG+GGG | - | tig0031177:32972-32991 | Msa1445800:CDS | 55.0% | |
| TCTTGTTGCCAACAGCGGCT+AGG | - | tig0031177:33431-33450 | Msa1445800:intron | 55.0% | |
| CCAGGGATGCAACAGTGTCA+AGG | + | tig0031177:34037-34056 | None:intergenic | 55.0% | |
| CCTTGACACTGTTGCATCCC+TGG | - | tig0031177:34034-34053 | Msa1445800:CDS | 55.0% | |
| CGGTGGTTCCGTCAGGGTTT+AGG | + | tig0031177:27242-27261 | None:intergenic | 60.0% | |
| TGAGGACGGTGGTTCCGTCA+GGG | + | tig0031177:27248-27267 | None:intergenic | 60.0% | |
| TTGAGGACGGTGGTTCCGTC+AGG | + | tig0031177:27249-27268 | None:intergenic | 60.0% | |
| TGACGGAACCACCGTCCTCA+AGG | - | tig0031177:27248-27267 | Msa1445800:three_prime_UTR | 60.0% | |
| TGGAAGCTCCTTGAGGACGG+TGG | + | tig0031177:27259-27278 | None:intergenic | 60.0% | |
| GGAAGCGGAGGTCGAGACAA+AGG | + | tig0031177:27289-27308 | None:intergenic | 60.0% | |
| TGTCTCGACCTCCGCTTCCA+CGG | - | tig0031177:27290-27309 | Msa1445800:three_prime_UTR | 60.0% | |
| TGACTCGAAGTCGGCCACGT+TGG | + | tig0031177:27864-27883 | None:intergenic | 60.0% | |
| GGTTCCACGACAGGTGCTTG+TGG | + | tig0031177:27969-27988 | None:intergenic | 60.0% | |
| GCCCTGTCCTTGGGAAGTTG+GGG | + | tig0031177:28302-28321 | None:intergenic | 60.0% | |
| GTTCTTCCCCTCCTCCTCCA+AGG | - | tig0031177:30617-30636 | Msa1445800:intron | 60.0% | |
| GACTCACCTTGGAGGAGGAG+GGG | + | tig0031177:30626-30645 | None:intergenic | 60.0% | |
| ATCTCCCCCAACAGCAGCTC+GGG | + | tig0031177:31966-31985 | None:intergenic | 60.0% | |
| CATCTCCCCCAACAGCAGCT+CGG | + | tig0031177:31967-31986 | None:intergenic | 60.0% | |
| ! | CAAGCCAGGCAGAAGCGTGA+AGG | - | tig0031177:32019-32038 | Msa1445800:intron | 60.0% |
| ! | AGCCAGGCAGAAGCGTGAAG+GGG | - | tig0031177:32021-32040 | Msa1445800:intron | 60.0% |
| TTTGGTCGAGGTGGGTGCGT+TGG | - | tig0031177:34143-34162 | Msa1445800:intron | 60.0% | |
| !! | AATCGGTGCCGTGGAAGCGG+AGG | + | tig0031177:27301-27320 | None:intergenic | 65.0% |
| !! | GCGAATCGGTGCCGTGGAAG+CGG | + | tig0031177:27304-27323 | None:intergenic | 65.0% |
| !! | AGAGCAGCGAATCGGTGCCG+TGG | + | tig0031177:27310-27329 | None:intergenic | 65.0% |
| CTGGACAGCAGCCCCCTGTA+AGG | - | tig0031177:28692-28711 | Msa1445800:intron | 65.0% | |
| TGGCAGCCCGAGCTGCTGTT+GGG | - | tig0031177:31957-31976 | Msa1445800:intron | 65.0% | |
| ! | GCCAGGCAGAAGCGTGAAGG+GGG | - | tig0031177:32022-32041 | Msa1445800:intron | 65.0% |
| ! | CCAGGCAGAAGCGTGAAGGG+GGG | - | tig0031177:32023-32042 | Msa1445800:intron | 65.0% |
| ! | GCAGAAGCGTGAAGGGGGGA+CGG | - | tig0031177:32027-32046 | Msa1445800:intron | 65.0% |
| AGGCGGGCAGTAGAGAAGCC+AGG | - | tig0031177:32553-32572 | Msa1445800:CDS | 65.0% | |
| GTGGCAGCCCGAGCTGCTGT+TGG | - | tig0031177:31956-31975 | Msa1445800:intron | 70.0% | |
| GGCAGCCCGAGCTGCTGTTG+GGG | - | tig0031177:31958-31977 | Msa1445800:intron | 70.0% | |
| GCAGCCCGAGCTGCTGTTGG+GGG | - | tig0031177:31959-31978 | Msa1445800:intron | 70.0% | |
| CCCCCCTTCACGCTTCTGCC+TGG | + | tig0031177:32026-32045 | None:intergenic | 70.0% | |
| GGGGGGACGGACACTGCATC+TGG | - | tig0031177:32040-32059 | Msa1445800:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031177 | gene | 27216 | 34519 | 27216 | ID=Msa1445800;Name=Msa1445800 |
| tig0031177 | mRNA | 27216 | 34519 | 27216 | ID=Msa1445800-mRNA-1;Parent=Msa1445800;Name=Msa1445800-mRNA-1;_AED=0.15;_eAED=0.15;_QI=291|0.92|0.93|1|0.92|0.86|15|315|887 |
| tig0031177 | exon | 27216 | 27529 | 27216 | ID=Msa1445800-mRNA-1:exon:15164;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 28119 | 28289 | 28119 | ID=Msa1445800-mRNA-1:exon:15163;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 29563 | 29824 | 29563 | ID=Msa1445800-mRNA-1:exon:15162;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 29903 | 29968 | 29903 | ID=Msa1445800-mRNA-1:exon:15161;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 30146 | 30286 | 30146 | ID=Msa1445800-mRNA-1:exon:15160;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 30371 | 30427 | 30371 | ID=Msa1445800-mRNA-1:exon:15159;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 30505 | 30560 | 30505 | ID=Msa1445800-mRNA-1:exon:15158;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 30685 | 30820 | 30685 | ID=Msa1445800-mRNA-1:exon:15157;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 30916 | 30997 | 30916 | ID=Msa1445800-mRNA-1:exon:15156;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 31097 | 31215 | 31097 | ID=Msa1445800-mRNA-1:exon:15155;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 32166 | 33065 | 32166 | ID=Msa1445800-mRNA-1:exon:15154;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 33147 | 33242 | 33147 | ID=Msa1445800-mRNA-1:exon:15153;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 33470 | 33903 | 33470 | ID=Msa1445800-mRNA-1:exon:15152;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 33997 | 34157 | 33997 | ID=Msa1445800-mRNA-1:exon:15151;Parent=Msa1445800-mRNA-1 |
| tig0031177 | exon | 34245 | 34519 | 34245 | ID=Msa1445800-mRNA-1:exon:15150;Parent=Msa1445800-mRNA-1 |
| tig0031177 | five_prime_UTR | 34245 | 34519 | 34245 | ID=Msa1445800-mRNA-1:five_prime_utr;Parent=Msa1445800-mRNA-1 |
| tig0031177 | five_prime_UTR | 34142 | 34157 | 34142 | ID=Msa1445800-mRNA-1:five_prime_utr;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 33997 | 34141 | 33997 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 33470 | 33903 | 33470 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 33147 | 33242 | 33147 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 32166 | 33065 | 32166 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 31097 | 31215 | 31097 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 30916 | 30997 | 30916 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 30685 | 30820 | 30685 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 30505 | 30560 | 30505 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 30371 | 30427 | 30371 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 30146 | 30286 | 30146 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 29903 | 29968 | 29903 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 29563 | 29824 | 29563 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | CDS | 28120 | 28289 | 28120 | ID=Msa1445800-mRNA-1:cds;Parent=Msa1445800-mRNA-1 |
| tig0031177 | three_prime_UTR | 28119 | 28119 | 28119 | ID=Msa1445800-mRNA-1:three_prime_utr;Parent=Msa1445800-mRNA-1 |
| tig0031177 | three_prime_UTR | 27216 | 27529 | 27216 | ID=Msa1445800-mRNA-1:three_prime_utr;Parent=Msa1445800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
