Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0714760 | KEH25298.1 | 78.899 | 109 | 20 | 1 | 1 | 109 | 664 | 769 | 1.60e-50 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0714760 | sp|Q9FWQ5|HAC12_ARATH | 47.475 | 99 | 47 | 1 | 3 | 101 | 1599 | 1692 | 1.92e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0714760 | A0A072U848 | 78.899 | 109 | 20 | 1 | 1 | 109 | 664 | 769 | 7.65e-51 | 181 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0714760 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0681250 | Msa0714760 | 0.804950 | 1.688570e-49 | -8.615850e-47 |
| Msa0712250 | Msa0714760 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0714760 | Msa0722630 | 0.802223 | 6.212545e-49 | -8.615850e-47 |
| Msa0714760 | Msa0733010 | 0.803925 | 2.761919e-49 | -8.615850e-47 |
| Msa0714760 | Msa0756770 | 0.951244 | 3.072970e-109 | -8.615850e-47 |
| Msa0714760 | Msa0795340 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
| Msa0714760 | Msa0836180 | 0.962977 | 1.592754e-121 | -8.615850e-47 |
| Msa0714760 | Msa0857940 | 0.809033 | 2.310907e-50 | -8.615850e-47 |
| Msa0714760 | Msa1213890 | 0.806358 | 8.551078e-50 | -8.615850e-47 |
| Msa0714760 | Msa1363390 | 0.802503 | 5.440521e-49 | -8.615850e-47 |
| Msa0129620 | Msa0714760 | 0.802822 | 4.673700e-49 | -8.615850e-47 |
| Msa0430830 | Msa0714760 | 0.802692 | 4.972217e-49 | -8.615850e-47 |
| Msa0306610 | Msa0714760 | 0.809800 | 1.582259e-50 | -8.615850e-47 |
| Msa0342980 | Msa0714760 | 0.865462 | 5.802092e-65 | -8.615850e-47 |
| Msa0575320 | Msa0714760 | 0.810496 | 1.119674e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0714760 | MtrunA17_Chr6g0456861 | 78.899 | 109 | 20 | 1 | 1 | 109 | 671 | 776 | 1.57e-54 | 181 |
| Msa0714760 | MtrunA17_Chr3g0138411 | 74.312 | 109 | 26 | 1 | 1 | 109 | 1100 | 1206 | 7.19e-52 | 174 |
| Msa0714760 | MtrunA17_Chr3g0133461 | 75.229 | 109 | 25 | 1 | 1 | 109 | 1237 | 1343 | 6.04e-51 | 172 |
| Msa0714760 | MtrunA17_Chr5g0438991 | 84.946 | 93 | 12 | 1 | 1 | 93 | 868 | 958 | 1.78e-49 | 167 |
| Msa0714760 | MtrunA17_Chr4g0000031 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1602 | 1695 | 2.56e-25 | 99.0 |
| Msa0714760 | MtrunA17_Chr5g0401281 | 37.500 | 72 | 44 | 1 | 22 | 92 | 279 | 350 | 1.71e-12 | 62.0 |
| Msa0714760 | MtrunA17_Chr5g0401991 | 96.429 | 28 | 1 | 0 | 1 | 28 | 194 | 221 | 7.81e-12 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0714760 | AT1G16710.1 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1599 | 1692 | 1.96e-26 | 102 |
| Msa0714760 | AT1G16710.3 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1573 | 1666 | 1.99e-26 | 102 |
| Msa0714760 | AT1G16710.10 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1573 | 1666 | 1.99e-26 | 102 |
| Msa0714760 | AT1G16710.8 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1573 | 1666 | 1.99e-26 | 102 |
| Msa0714760 | AT1G16710.7 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1573 | 1666 | 1.99e-26 | 102 |
| Msa0714760 | AT1G16710.2 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1570 | 1663 | 2.01e-26 | 102 |
| Msa0714760 | AT1G16710.6 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1534 | 1627 | 2.03e-26 | 102 |
| Msa0714760 | AT1G16710.4 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1534 | 1627 | 2.03e-26 | 102 |
| Msa0714760 | AT1G16710.5 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1534 | 1627 | 2.03e-26 | 102 |
| Msa0714760 | AT1G79000.1 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1590 | 1683 | 5.32e-26 | 101 |
| Msa0714760 | AT1G79000.2 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1590 | 1683 | 5.43e-26 | 101 |
| Msa0714760 | AT1G79000.3 | 47.475 | 99 | 47 | 1 | 3 | 101 | 1566 | 1659 | 5.47e-26 | 101 |
| Msa0714760 | AT3G12980.1 | 42.308 | 78 | 42 | 1 | 24 | 101 | 1581 | 1655 | 6.15e-16 | 72.4 |
| Msa0714760 | AT3G12980.2 | 42.308 | 78 | 42 | 1 | 24 | 101 | 1500 | 1574 | 6.64e-16 | 72.4 |
| Msa0714760 | AT5G67480.2 | 38.667 | 75 | 45 | 1 | 20 | 93 | 282 | 356 | 6.59e-12 | 60.8 |
| Msa0714760 | AT5G67480.1 | 38.667 | 75 | 45 | 1 | 20 | 93 | 271 | 345 | 7.04e-12 | 60.8 |
| Msa0714760 | AT5G67480.3 | 38.667 | 75 | 45 | 1 | 20 | 93 | 271 | 345 | 7.04e-12 | 60.8 |
| Msa0714760 | AT1G67220.1 | 35.366 | 82 | 50 | 2 | 1 | 81 | 1281 | 1360 | 1.69e-11 | 59.7 |
Find 195 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACTTTGTCCTTCTTTC+AGG | 0.073241 | 5_1:+7552400 | None:intergenic |
| CCCTGGTAGGCAATATATTT+TGG | 0.147750 | 5_1:+7551549 | None:intergenic |
| GTCTCCAATTTCAACATATT+TGG | 0.169388 | 5_1:-7555047 | Msa0714760:five_prime_UTR |
| AGAGTAGATTGTTTGGAAAT+AGG | 0.201852 | 5_1:-7551131 | Msa0714760:five_prime_UTR |
| GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 5_1:-7552748 | Msa0714760:five_prime_UTR |
| GCATTTGAGTCGCTTCTTAC+TGG | 0.234178 | 5_1:+7555260 | None:intergenic |
| GAGTAGATTGTTTGGAAATA+GGG | 0.235125 | 5_1:-7551130 | Msa0714760:five_prime_UTR |
| CTTACTAAGGGTTGTTATAT+TGG | 0.244244 | 5_1:-7554698 | Msa0714760:five_prime_UTR |
| TGCTTCTGTTGATTAGCTTT+TGG | 0.246779 | 5_1:+7554109 | None:intergenic |
| AAGAGAAATCAACTTCAATT+TGG | 0.249229 | 5_1:-7555378 | Msa0714760:five_prime_UTR |
| CACTGAATGCAAGAAATTTC+AGG | 0.254650 | 5_1:-7551447 | Msa0714760:five_prime_UTR |
| GCCACCAAATATGTTGAAAT+TGG | 0.255477 | 5_1:+7555043 | None:intergenic |
| GGCAGTGAAGAAGCAGTTTC+TGG | 0.255829 | 5_1:-7553482 | Msa0714760:five_prime_UTR |
| TTCCGAGTCTTTGCAATTCC+TGG | 0.259668 | 5_1:+7550639 | None:intergenic |
| AAATTGTGTACAACCGTAAT+TGG | 0.278809 | 5_1:-7554550 | Msa0714760:five_prime_UTR |
| CCTTAACATAATGAATAATA+AGG | 0.280716 | 5_1:+7550159 | None:intergenic |
| TTACCAAAGGCGGCTAATTC+TGG | 0.284652 | 5_1:-7553151 | Msa0714760:five_prime_UTR |
| TCAAGAATTGAAGACTTTGA+TGG | 0.290325 | 5_1:+7555313 | None:intergenic |
| TGGTCACTTAGCACTGTTCT+TGG | 0.319724 | 5_1:+7553115 | None:intergenic |
| CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 5_1:-7552362 | Msa0714760:intron |
| TCCTCTACATCAATAGGAAT+TGG | 0.326549 | 5_1:+7554191 | None:intergenic |
| TTGCATCACCAGAGTCTCTT+TGG | 0.327824 | 5_1:+7551738 | None:intergenic |
| TTGCCGTAGAGCTGAAGTTT+TGG | 0.336259 | 5_1:-7550381 | Msa0714760:CDS |
| TGTTTGTCCTCTACATCAAT+AGG | 0.344000 | 5_1:+7554185 | None:intergenic |
| TAATCATCCCCTTTCTTTGA+AGG | 0.345904 | 5_1:+7552171 | None:intergenic |
| CTTCTGTTTAAGCTGATTGA+AGG | 0.363488 | 5_1:-7552536 | Msa0714760:five_prime_UTR |
| TTCTTGAAGTAAAGTTCTAA+TGG | 0.364202 | 5_1:-7555297 | Msa0714760:five_prime_UTR |
| AGTGTCAAATAGAACATTAA+AGG | 0.370702 | 5_1:-7551782 | Msa0714760:five_prime_UTR |
| TTCTTTCTTCCTACTGAAAA+GGG | 0.371996 | 5_1:-7551931 | Msa0714760:five_prime_UTR |
| TTTCAGACTTCAAATATGTT+TGG | 0.375360 | 5_1:+7554018 | None:intergenic |
| GAATTGGAAGCTGGCTTATG+AGG | 0.376100 | 5_1:+7554207 | None:intergenic |
| CTTGAGAATCTGTCCCCTCC+TGG | 0.377841 | 5_1:+7554144 | None:intergenic |
| TTTCTTTCTTCCTACTGAAA+AGG | 0.378702 | 5_1:-7551932 | Msa0714760:five_prime_UTR |
| ACTTTCTGATTGTGCTTCCT+TGG | 0.380253 | 5_1:-7555518 | Msa0714760:five_prime_UTR |
| CCTTATTATTCATTATGTTA+AGG | 0.387380 | 5_1:-7550159 | Msa0714760:intron |
| GTTTCTCAACTTGCTACATA+TGG | 0.388170 | 5_1:-7552203 | Msa0714760:five_prime_UTR |
| GTCCTTGAGAGTAGATTGTT+TGG | 0.389989 | 5_1:-7551138 | Msa0714760:five_prime_UTR |
| GCACCAGAATTAGCCGCCTT+TGG | 0.391601 | 5_1:+7553148 | None:intergenic |
| CAGCAGTCTCCTTCAAAGTA+TGG | 0.394018 | 5_1:+7551880 | None:intergenic |
| AAGTGTGTTGATCATAACTA+TGG | 0.394998 | 5_1:+7551320 | None:intergenic |
| TCTTCAAAACATCTCTTTCG+TGG | 0.398197 | 5_1:+7554620 | None:intergenic |
| GAAACTCACCAATAGTTTCC+TGG | 0.399129 | 5_1:-7555072 | Msa0714760:five_prime_UTR |
| ATATATTCACAAAGATTCAT+TGG | 0.399198 | 5_1:+7550336 | None:intergenic |
| AGTATGTCAATCTGAGAATC+AGG | 0.404577 | 5_1:-7550956 | Msa0714760:five_prime_UTR |
| GTTATATTGGTGCGAATACT+TGG | 0.405425 | 5_1:-7554685 | Msa0714760:five_prime_UTR |
| GAATTGAATAGTTGGACCTT+AGG | 0.410293 | 5_1:+7550014 | None:intergenic |
| ATGCATCTCAATGCCGCCGC+CGG | 0.412185 | 5_1:-7550801 | Msa0714760:CDS |
| TCGCATTAGGATTGTGTAGA+TGG | 0.417229 | 5_1:+7551022 | None:intergenic |
| ATAACTGATGAAGAATGTTT+TGG | 0.417678 | 5_1:+7554653 | None:intergenic |
| ATGCATACACAAGCGCTGAT+TGG | 0.422768 | 5_1:+7552454 | None:intergenic |
| CAGCATTACTTGCCCGGCGG+CGG | 0.424812 | 5_1:+7550788 | None:intergenic |
| CAGAGTCTCTTTGGAAGGCT+TGG | 0.425209 | 5_1:+7551747 | None:intergenic |
| TTTCGTTTGCCATACTTTGA+AGG | 0.426623 | 5_1:-7551889 | Msa0714760:five_prime_UTR |
| TCATGCAAGAGAGAGAAAAC+TGG | 0.430015 | 5_1:-7553066 | Msa0714760:five_prime_UTR |
| CCCTTTCTTTGAAGGAGCAC+AGG | 0.430843 | 5_1:+7552179 | None:intergenic |
| TATGTTTGGTTATTTGATCA+TGG | 0.433346 | 5_1:+7554032 | None:intergenic |
| TCAGCAGGGTAATTCTCCTC+TGG | 0.435068 | 5_1:+7552717 | None:intergenic |
| TGCATCTCAATGCCGCCGCC+GGG | 0.437980 | 5_1:-7550800 | Msa0714760:CDS |
| TGAGACTTGAATTGAATAGT+TGG | 0.440051 | 5_1:+7550006 | None:intergenic |
| CAATGACAACATTATCAAAC+AGG | 0.440162 | 5_1:+7555478 | None:intergenic |
| CGGCGTAGCTTATCATTCTT+CGG | 0.441625 | 5_1:+7552114 | None:intergenic |
| TGCATTCAGAGTCAAATTCC+TGG | 0.443063 | 5_1:+7552483 | None:intergenic |
| TTTCAGTAGGAAGAAAGAAA+TGG | 0.445855 | 5_1:+7551935 | None:intergenic |
| ATCATTATGTTTAGTGTTGG+AGG | 0.449050 | 5_1:+7551164 | None:intergenic |
| AATCTATAAAAGAATTCAGC+AGG | 0.450271 | 5_1:+7553436 | None:intergenic |
| TGCATACACAAGCGCTGATT+GGG | 0.451340 | 5_1:+7552455 | None:intergenic |
| TAATCTTCTTATTACTCTCA+TGG | 0.454962 | 5_1:-7555168 | Msa0714760:five_prime_UTR |
| TTCTTGATTTGAGAACAGTT+TGG | 0.456469 | 5_1:+7550751 | None:intergenic |
| TTCAGGCCTAAAATACTTGA+CGG | 0.457367 | 5_1:+7552417 | None:intergenic |
| AGAATTAGCCGCCTTTGGTA+AGG | 0.464266 | 5_1:+7553153 | None:intergenic |
| TCAGCAGGGTAATTCTCATC+TGG | 0.465105 | 5_1:+7553451 | None:intergenic |
| TGCCGTGAAGTGATAGTGTC+TGG | 0.465307 | 5_1:-7551485 | Msa0714760:five_prime_UTR |
| CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 5_1:+7551088 | None:intergenic |
| AATATCATTATGTTTAGTGT+TGG | 0.474871 | 5_1:+7551161 | None:intergenic |
| ATTTCAACATATTTGGTGGC+AGG | 0.477391 | 5_1:-7555040 | Msa0714760:five_prime_UTR |
| ACCTGTGCTCCTTCAAAGAA+AGG | 0.478002 | 5_1:-7552180 | Msa0714760:five_prime_UTR |
| TAAATGATTGTTTGTAGCAA+TGG | 0.479509 | 5_1:+7555199 | None:intergenic |
| AGGCAGAGTAGTATTTAGTC+AGG | 0.479801 | 5_1:-7554342 | Msa0714760:five_prime_UTR |
| GATCTATAAGAGAATTCAGC+AGG | 0.480043 | 5_1:+7552702 | None:intergenic |
| ATAAAATTTACATACACAAA+AGG | 0.480566 | 5_1:+7550208 | None:intergenic |
| TCATCAAAGTTAATAAAACT+TGG | 0.482881 | 5_1:+7550288 | None:intergenic |
| GGAGACTCCCAGGAAACTAT+TGG | 0.483016 | 5_1:+7555064 | None:intergenic |
| AAGCGAGAAGATGCTTACTA+AGG | 0.483446 | 5_1:-7554711 | Msa0714760:five_prime_UTR |
| TGAGGTGCATACACTTTGTC+AGG | 0.483949 | 5_1:-7551287 | Msa0714760:intron |
| GCCAAAATATATTGCCTACC+AGG | 0.484399 | 5_1:-7551550 | Msa0714760:five_prime_UTR |
| GATGACAGACAACAATTCAA+TGG | 0.488131 | 5_1:-7554264 | Msa0714760:five_prime_UTR |
| ATGGCTCAGCATTACTTGCC+CGG | 0.490163 | 5_1:+7550782 | None:intergenic |
| TCCAATTTCAACATATTTGG+TGG | 0.490994 | 5_1:-7555044 | Msa0714760:five_prime_UTR |
| CCTGTGCTCCTTCAAAGAAA+GGG | 0.494532 | 5_1:-7552179 | Msa0714760:five_prime_UTR |
| AAAGAAATGGTCATGTATGT+TGG | 0.496652 | 5_1:+7551948 | None:intergenic |
| GGGAAAGATCTTGAAATACA+TGG | 0.496918 | 5_1:-7554287 | Msa0714760:five_prime_UTR |
| TCCCAGACACTATCACTTCA+CGG | 0.498199 | 5_1:+7551483 | None:intergenic |
| ACCGAAGAAAATATTGTCGT+TGG | 0.500600 | 5_1:-7551976 | Msa0714760:five_prime_UTR |
| AGTGGGATGAATGCAATAGA+TGG | 0.504930 | 5_1:-7553282 | Msa0714760:five_prime_UTR |
| CATTATGTTTAGTGTTGGAG+GGG | 0.505283 | 5_1:+7551166 | None:intergenic |
| GTTGTTGAATATATATTCAA+TGG | 0.510107 | 5_1:-7550044 | Msa0714760:three_prime_UTR |
| GATCAACACACTTCAAAGAA+TGG | 0.512393 | 5_1:-7551310 | Msa0714760:five_prime_UTR |
| GTGCAAAATTCGATTAAATG+AGG | 0.513828 | 5_1:-7550707 | Msa0714760:CDS |
| CTCCAGGAATTGCAAAGACT+CGG | 0.514621 | 5_1:-7550641 | Msa0714760:CDS |
| TCATTATGTTTAGTGTTGGA+GGG | 0.517970 | 5_1:+7551165 | None:intergenic |
| TATATTGACGTTTGAAGAAG+AGG | 0.518605 | 5_1:-7555011 | Msa0714760:five_prime_UTR |
| CATCAATAGGAATTGGAAGC+TGG | 0.521522 | 5_1:+7554198 | None:intergenic |
| AATCATCATAGAGGAATACT+TGG | 0.522130 | 5_1:+7551050 | None:intergenic |
| GGCGGCTAATTCTGGTGCTA+AGG | 0.522544 | 5_1:-7553143 | Msa0714760:five_prime_UTR |
| ATCACCAGAGTCTCTTTGGA+AGG | 0.522915 | 5_1:+7551742 | None:intergenic |
| CGAAAAGTCTTATCTCTAAG+TGG | 0.523031 | 5_1:+7553095 | None:intergenic |
| TCCAATTCCTATTGATGTAG+AGG | 0.524039 | 5_1:-7554192 | Msa0714760:five_prime_UTR |
| GAATTAGCCGCCTTTGGTAA+GGG | 0.525892 | 5_1:+7553154 | None:intergenic |
| CAGCAGGGTAATTCTCCTCT+GGG | 0.526093 | 5_1:+7552718 | None:intergenic |
| GCACTGATTTCTGTTCTACA+TGG | 0.527594 | 5_1:+7550414 | None:intergenic |
| CAAGCCTTCCAAAGAGACTC+TGG | 0.527624 | 5_1:-7551746 | Msa0714760:five_prime_UTR |
| AGAAATTTCAGGAGTGTGAA+AGG | 0.528641 | 5_1:-7551436 | Msa0714760:intron |
| ATGTTTGGTTATTTGATCAT+GGG | 0.532573 | 5_1:+7554033 | None:intergenic |
| TGCAAAATTCGATTAAATGA+GGG | 0.532824 | 5_1:-7550706 | Msa0714760:CDS |
| CTGCTGGTGTGGTAATGCTA+TGG | 0.533073 | 5_1:-7551863 | Msa0714760:five_prime_UTR |
| GAAGAATTAAGCTATCAAGT+AGG | 0.533542 | 5_1:-7554602 | Msa0714760:five_prime_UTR |
| TTTCCAAAACTTCAGCTCTA+CGG | 0.533760 | 5_1:+7550378 | None:intergenic |
| GTTATCTGTTGACAACCAAC+TGG | 0.534094 | 5_1:-7553503 | Msa0714760:five_prime_UTR |
| ATTCAATGGTTGAGAACCTA+AGG | 0.534499 | 5_1:-7550030 | Msa0714760:three_prime_UTR |
| AAACTCACCAATAGTTTCCT+GGG | 0.534969 | 5_1:-7555071 | Msa0714760:five_prime_UTR |
| AGACATTAACAAACAGATTG+AGG | 0.538285 | 5_1:+7555223 | None:intergenic |
| CATGGACTGAATCAGCATCA+AGG | 0.538652 | 5_1:+7555404 | None:intergenic |
| TCAACTTCAATTTGGACTCG+TGG | 0.539110 | 5_1:-7555370 | Msa0714760:five_prime_UTR |
| AATGTAGAATACCACGCTGC+AGG | 0.540083 | 5_1:-7550618 | Msa0714760:intron |
| TTATACTAACTTCTCACTCC+AGG | 0.540435 | 5_1:-7550657 | Msa0714760:CDS |
| TGTTGAAATTGGAGACTCCC+AGG | 0.540952 | 5_1:+7555054 | None:intergenic |
| AATTGGAAGCTGGCTTATGA+GGG | 0.545245 | 5_1:+7554208 | None:intergenic |
| AGAGTAGTATTTAGTCAGGA+GGG | 0.549852 | 5_1:-7554338 | Msa0714760:five_prime_UTR |
| ACAAACTCCTTCACATCAGA+AGG | 0.559927 | 5_1:-7555434 | Msa0714760:five_prime_UTR |
| GCGACTCAAATGCAAGAAGC+GGG | 0.562949 | 5_1:-7555250 | Msa0714760:five_prime_UTR |
| GAAAGCGATGGAGCAATCGT+TGG | 0.563087 | 5_1:-7550359 | Msa0714760:CDS |
| ATGGGTGGACAGATCAATCA+AGG | 0.563419 | 5_1:+7554051 | None:intergenic |
| CATGCAAGAGAGAGAAAACT+GGG | 0.565706 | 5_1:-7553065 | Msa0714760:five_prime_UTR |
| AGCGAGAAGATGCTTACTAA+GGG | 0.568051 | 5_1:-7554710 | Msa0714760:five_prime_UTR |
| TTCCAAACAATCTACTCTCA+AGG | 0.576903 | 5_1:+7551136 | None:intergenic |
| CTCAAAAGATATCAGAGGAG+GGG | 0.578093 | 5_1:-7554307 | Msa0714760:five_prime_UTR |
| TTTGGTTATTTGATCATGGG+TGG | 0.578504 | 5_1:+7554036 | None:intergenic |
| AAATAGAACATTAAAGGACA+TGG | 0.581441 | 5_1:-7551776 | Msa0714760:five_prime_UTR |
| CAAACGAAAAGCTGTCACCT+TGG | 0.585482 | 5_1:+7551903 | None:intergenic |
| ACTCATACCTTCTGATGTGA+AGG | 0.585878 | 5_1:+7555427 | None:intergenic |
| ACTGCTTCTTCACTGCCAGT+TGG | 0.587332 | 5_1:+7553488 | None:intergenic |
| GAACAGTTTGGATGAGAGCA+TGG | 0.587828 | 5_1:+7550763 | None:intergenic |
| GAATTTAATTCAACCAGGAG+GGG | 0.589658 | 5_1:-7554157 | Msa0714760:five_prime_UTR |
| TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 5_1:-7551475 | Msa0714760:five_prime_UTR |
| AGCGACTCAAATGCAAGAAG+CGG | 0.590962 | 5_1:-7555251 | Msa0714760:five_prime_UTR |
| CCAAAATATATTGCCTACCA+GGG | 0.595401 | 5_1:-7551549 | Msa0714760:five_prime_UTR |
| GGAAAGATCTTGAAATACAT+GGG | 0.595735 | 5_1:-7554286 | Msa0714760:five_prime_UTR |
| AGAATGATAAGCTACGCCGC+TGG | 0.596059 | 5_1:-7552110 | Msa0714760:intron |
| CATACTTTGAAGGAGACTGC+TGG | 0.599995 | 5_1:-7551879 | Msa0714760:five_prime_UTR |
| AAGTAGGATTCTCCACAGAC+TGG | 0.600517 | 5_1:-7554586 | Msa0714760:five_prime_UTR |
| CAGAGTAGTATTTAGTCAGG+AGG | 0.600694 | 5_1:-7554339 | Msa0714760:five_prime_UTR |
| GATGTTGAACAGGACATACA+AGG | 0.607215 | 5_1:-7554362 | Msa0714760:intron |
| TGCTCAAAAGATATCAGAGG+AGG | 0.607660 | 5_1:-7554309 | Msa0714760:five_prime_UTR |
| GGAATTTAATTCAACCAGGA+GGG | 0.607699 | 5_1:-7554158 | Msa0714760:five_prime_UTR |
| CTGTGCTCCTTCAAAGAAAG+GGG | 0.607767 | 5_1:-7552178 | Msa0714760:five_prime_UTR |
| TAAGAAACTAAACGCAAAGT+GGG | 0.608367 | 5_1:-7555127 | Msa0714760:five_prime_UTR |
| TCTTTCTTCCTACTGAAAAG+GGG | 0.608508 | 5_1:-7551930 | Msa0714760:five_prime_UTR |
| ATATTGACGTTTGAAGAAGA+GGG | 0.608573 | 5_1:-7555010 | Msa0714760:intron |
| AGAATGATACCGCCAGTCTG+TGG | 0.610785 | 5_1:+7554574 | None:intergenic |
| AATATTGCAAGTGAGCTATG+AGG | 0.614269 | 5_1:+7551519 | None:intergenic |
| TACTGAAAAGGGGAACTCCA+AGG | 0.617666 | 5_1:-7551920 | Msa0714760:five_prime_UTR |
| GCTCAAAAGATATCAGAGGA+GGG | 0.621747 | 5_1:-7554308 | Msa0714760:five_prime_UTR |
| TTAAGAAACTAAACGCAAAG+TGG | 0.628224 | 5_1:-7555128 | Msa0714760:five_prime_UTR |
| CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 5_1:+7552371 | None:intergenic |
| AATAGAACATTAAAGGACAT+GGG | 0.630593 | 5_1:-7551775 | Msa0714760:five_prime_UTR |
| GCATGTTCCCTTACCAAAGG+CGG | 0.630753 | 5_1:-7553161 | Msa0714760:five_prime_UTR |
| ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 5_1:+7552372 | None:intergenic |
| AATTCAATGGAAATTGACAT+CGG | 0.636320 | 5_1:-7554251 | Msa0714760:five_prime_UTR |
| TTTGAAGGAGACTGCTGGTG+TGG | 0.637044 | 5_1:-7551874 | Msa0714760:five_prime_UTR |
| CCTGAAAGAAGGACAAAGTG+TGG | 0.639771 | 5_1:-7552400 | Msa0714760:five_prime_UTR |
| GCCGTGAAGTGATAGTGTCT+GGG | 0.641094 | 5_1:-7551484 | Msa0714760:five_prime_UTR |
| GAAACTAAACGCAAAGTGGG+AGG | 0.641967 | 5_1:-7555124 | Msa0714760:five_prime_UTR |
| ACTCGTGGTTAGATACAAGA+TGG | 0.648760 | 5_1:-7555355 | Msa0714760:five_prime_UTR |
| AGACGGAATTTAATTCAACC+AGG | 0.650506 | 5_1:-7554162 | Msa0714760:five_prime_UTR |
| GAGTAGTATTTAGTCAGGAG+GGG | 0.652349 | 5_1:-7554337 | Msa0714760:five_prime_UTR |
| AATGCATGTTCCCTTACCAA+AGG | 0.654704 | 5_1:-7553164 | Msa0714760:five_prime_UTR |
| ATCTATAAAAGAATTCAGCA+GGG | 0.660921 | 5_1:+7553437 | None:intergenic |
| GATGTAGAGGACAAACAAGA+CGG | 0.661675 | 5_1:-7554179 | Msa0714760:five_prime_UTR |
| AGGTGGTGTACTAACCTGAA+CGG | 0.662393 | 5_1:+7553988 | None:intergenic |
| CGGAATTTAATTCAACCAGG+AGG | 0.663652 | 5_1:-7554159 | Msa0714760:five_prime_UTR |
| CAATATCTCATGGTAAACGA+AGG | 0.666016 | 5_1:+7552363 | None:intergenic |
| AGGGAATGAGAATCTTGATG+AGG | 0.666581 | 5_1:-7553032 | Msa0714760:intron |
| TAGGATTCTCCACAGACTGG+CGG | 0.666878 | 5_1:-7554583 | Msa0714760:five_prime_UTR |
| TAGAGGAATACTTGGCACGA+CGG | 0.668087 | 5_1:+7551058 | None:intergenic |
| GGTTAGATACAAGATGGTCA+AGG | 0.669020 | 5_1:-7555349 | Msa0714760:five_prime_UTR |
| ATCTATAAGAGAATTCAGCA+GGG | 0.680316 | 5_1:+7552703 | None:intergenic |
| AGTTGCTCAAAAGATATCAG+AGG | 0.685664 | 5_1:-7554312 | Msa0714760:five_prime_UTR |
| GGAGGGGATATCATCAACAA+CGG | 0.699125 | 5_1:+7551182 | None:intergenic |
| CATTAACAAACAGATTGAGG+AGG | 0.701927 | 5_1:+7555226 | None:intergenic |
| ACACACTTCAAAGAATGGTG+AGG | 0.703040 | 5_1:-7551305 | Msa0714760:five_prime_UTR |
| ACACTTCTCAACAAGTACCA+AGG | 0.704084 | 5_1:+7555501 | None:intergenic |
| GCTCAGCATTACTTGCCCGG+CGG | 0.716635 | 5_1:+7550785 | None:intergenic |
| ATGGTAGAGAATCATCATAG+AGG | 0.733865 | 5_1:+7551041 | None:intergenic |
| ATTGTAACACACCTGCAGCG+TGG | 0.738381 | 5_1:+7550607 | None:intergenic |
| GTTTCTGGACATCATCCCAG+AGG | 0.751856 | 5_1:-7552733 | Msa0714760:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGATCAATAATTTTAA+GGG | + | chr5_1:7552594-7552613 | None:intergenic | 10.0% |
| !! | AAACAAACAATATAAAAATA+AGG | + | chr5_1:7553463-7553482 | None:intergenic | 10.0% |
| !!! | ATTTTATTATGTATATACAT+AGG | - | chr5_1:7555298-7555317 | Msa0714760:five_prime_UTR | 10.0% |
| !!! | AACATCATTTATTTTATTTG+AGG | + | chr5_1:7551415-7551434 | None:intergenic | 15.0% |
| !!! | TTCTTTTTAAATAACATACT+AGG | + | chr5_1:7551881-7551900 | None:intergenic | 15.0% |
| !!! | GAAAAAGATCAATAATTTTA+AGG | + | chr5_1:7552595-7552614 | None:intergenic | 15.0% |
| !!! | GTTCATTTTATTAGTTTTAT+TGG | + | chr5_1:7553182-7553201 | None:intergenic | 15.0% |
| !! | ATAAAATTTACATACACAAA+AGG | + | chr5_1:7555285-7555304 | None:intergenic | 15.0% |
| !! | TATAACTTATGTATATACAT+AGG | + | chr5_1:7555365-7555384 | None:intergenic | 15.0% |
| !!! | TTTTTCTTCTCTGAATTTTA+AGG | + | chr5_1:7550397-7550416 | None:intergenic | 20.0% |
| !! | TTAATTCAAATAGTGAATCA+TGG | - | chr5_1:7550535-7550554 | Msa0714760:intron | 20.0% |
| !!! | TTTTTCTTCTTATCCAATTA+CGG | + | chr5_1:7550956-7550975 | None:intergenic | 20.0% |
| !!! | ATTTATTTTATTTGAGGATG+TGG | + | chr5_1:7551409-7551428 | None:intergenic | 20.0% |
| !! | ATCAATGTATTTAAAAACAC+AGG | + | chr5_1:7551529-7551548 | None:intergenic | 20.0% |
| !! | TTAAATACATTGATCTGTTT+AGG | - | chr5_1:7551535-7551554 | Msa0714760:five_prime_UTR | 20.0% |
| !! | TTTAAATAACATACTAGGAA+GGG | + | chr5_1:7551876-7551895 | None:intergenic | 20.0% |
| !!! | TTTTAAATAACATACTAGGA+AGG | + | chr5_1:7551877-7551896 | None:intergenic | 20.0% |
| !!! | TTCCATTTTCAATTTCTTTT+TGG | + | chr5_1:7552308-7552327 | None:intergenic | 20.0% |
| !! | TTTATATTGTTTGTTTATGC+AGG | - | chr5_1:7553467-7553486 | Msa0714760:five_prime_UTR | 20.0% |
| !! | TTCATTTACTCAAGTATAAA+AGG | + | chr5_1:7553813-7553832 | None:intergenic | 20.0% |
| !!! | AACTTAAACTAGTCTATAAT+AGG | + | chr5_1:7553849-7553868 | None:intergenic | 20.0% |
| !!! | TAGCATTGAATGAAATAAAA+AGG | - | chr5_1:7554109-7554128 | Msa0714760:five_prime_UTR | 20.0% |
| !!! | AGCATTGAATGAAATAAAAA+GGG | - | chr5_1:7554110-7554129 | Msa0714760:five_prime_UTR | 20.0% |
| !! | AATATCATTATGTTTAGTGT+TGG | + | chr5_1:7554332-7554351 | None:intergenic | 20.0% |
| !!! | AAAACAGAGTCATTTTTTTT+TGG | - | chr5_1:7554995-7555014 | Msa0714760:intron | 20.0% |
| !! | ATATATTCACAAAGATTCAT+TGG | + | chr5_1:7555157-7555176 | None:intergenic | 20.0% |
| !! | TCATCAAAGTTAATAAAACT+TGG | + | chr5_1:7555205-7555224 | None:intergenic | 20.0% |
| !! | CCTTAACATAATGAATAATA+AGG | + | chr5_1:7555334-7555353 | None:intergenic | 20.0% |
| !! | CCTTATTATTCATTATGTTA+AGG | - | chr5_1:7555331-7555350 | Msa0714760:five_prime_UTR | 20.0% |
| !! | GTTGTTGAATATATATTCAA+TGG | - | chr5_1:7555446-7555465 | Msa0714760:five_prime_UTR | 20.0% |
| !!! | AAGTTGATTTCTCTTTTTCA+TGG | + | chr5_1:7550107-7550126 | None:intergenic | 25.0% |
| ! | AAGAGAAATCAACTTCAATT+TGG | - | chr5_1:7550112-7550131 | Msa0714760:intron | 25.0% |
| !! | TTCTTGAAGTAAAGTTCTAA+TGG | - | chr5_1:7550193-7550212 | Msa0714760:three_prime_UTR | 25.0% |
| ! | TAAATGATTGTTTGTAGCAA+TGG | + | chr5_1:7550294-7550313 | None:intergenic | 25.0% |
| ! | TAATCTTCTTATTACTCTCA+TGG | - | chr5_1:7550322-7550341 | Msa0714760:three_prime_UTR | 25.0% |
| !! | TTTCCCTCTTTATTAGTTTA+TGG | - | chr5_1:7550672-7550691 | Msa0714760:CDS | 25.0% |
| !! | TATTTGTTGATTGTTTCTTG+TGG | - | chr5_1:7550730-7550749 | Msa0714760:CDS | 25.0% |
| !! | ATAACTGATGAAGAATGTTT+TGG | + | chr5_1:7550840-7550859 | None:intergenic | 25.0% |
| ! | AATAGCAATATTTCCACAAT+AGG | + | chr5_1:7551050-7551069 | None:intergenic | 25.0% |
| ! | AATTCAATGGAAATTGACAT+CGG | - | chr5_1:7551239-7551258 | Msa0714760:intron | 25.0% |
| ! | ATGTTTGGTTATTTGATCAT+GGG | + | chr5_1:7551460-7551479 | None:intergenic | 25.0% |
| ! | TATGTTTGGTTATTTGATCA+TGG | + | chr5_1:7551461-7551480 | None:intergenic | 25.0% |
| ! | TTTCAGACTTCAAATATGTT+TGG | + | chr5_1:7551475-7551494 | None:intergenic | 25.0% |
| ! | ATGTATTTAAAAACACAGGA+AGG | + | chr5_1:7551525-7551544 | None:intergenic | 25.0% |
| ! | AATCAAATGCTTAAAAGAAG+AGG | + | chr5_1:7551571-7551590 | None:intergenic | 25.0% |
| ! | AATTCATGTTTGTAAGCATT+TGG | - | chr5_1:7551597-7551616 | Msa0714760:intron | 25.0% |
| !! | AAGCATTTGGTTTATAACAT+AGG | - | chr5_1:7551643-7551662 | Msa0714760:intron | 25.0% |
| !!! | AAAAAGTGTCAACTTGTATA+TGG | + | chr5_1:7551704-7551723 | None:intergenic | 25.0% |
| ! | AATTTCAGACTACTATTGAT+CGG | + | chr5_1:7551827-7551846 | None:intergenic | 25.0% |
| ! | ATCTATAAAAGAATTCAGCA+GGG | + | chr5_1:7552056-7552075 | None:intergenic | 25.0% |
| ! | AATCTATAAAAGAATTCAGC+AGG | + | chr5_1:7552057-7552076 | None:intergenic | 25.0% |
| ! | AAAAAACAGTCATAAAGAGT+TGG | + | chr5_1:7552183-7552202 | None:intergenic | 25.0% |
| !! | CATTTTCAATTTCTTTTTGG+TGG | + | chr5_1:7552305-7552324 | None:intergenic | 25.0% |
| ! | CACCAAAAAGAAATTGAAAA+TGG | - | chr5_1:7552303-7552322 | Msa0714760:intron | 25.0% |
| !!! | TCAATAATTTTAAGGGAACA+TGG | + | chr5_1:7552587-7552606 | None:intergenic | 25.0% |
| ! | GTGGTTTATCAATGAATAAA+TGG | - | chr5_1:7552824-7552843 | Msa0714760:intron | 25.0% |
| ! | GAGAACTTCTATTAAATGTT+TGG | + | chr5_1:7552918-7552937 | None:intergenic | 25.0% |
| ! | AGAAAAATACCAATATCTCA+TGG | + | chr5_1:7553140-7553159 | None:intergenic | 25.0% |
| ! | TAAAGCATAAAAAGAGAGAA+TGG | + | chr5_1:7553216-7553235 | None:intergenic | 25.0% |
| !! | ACCTTGATTTTTGTAACAAA+AGG | - | chr5_1:7553263-7553282 | Msa0714760:five_prime_UTR | 25.0% |
| !! | CCTTGATTTTTGTAACAAAA+GGG | - | chr5_1:7553264-7553283 | Msa0714760:five_prime_UTR | 25.0% |
| !! | CTTGATTTTTGTAACAAAAG+GGG | - | chr5_1:7553265-7553284 | Msa0714760:five_prime_UTR | 25.0% |
| ! | AGTGTCAAATAGAACATTAA+AGG | - | chr5_1:7553708-7553727 | Msa0714760:intron | 25.0% |
| ! | AAATAGAACATTAAAGGACA+TGG | - | chr5_1:7553714-7553733 | Msa0714760:intron | 25.0% |
| ! | AATAGAACATTAAAGGACAT+GGG | - | chr5_1:7553715-7553734 | Msa0714760:intron | 25.0% |
| ! | TATAAAAGGATATATCCCAT+TGG | + | chr5_1:7553799-7553818 | None:intergenic | 25.0% |
| !! | AAATGAAAAACTTCAGGTTT+AGG | + | chr5_1:7554235-7554254 | None:intergenic | 25.0% |
| ! | CATATGAAATGAAAAACTTC+AGG | + | chr5_1:7554241-7554260 | None:intergenic | 25.0% |
| !! | TATAATTGTGTAACGTTTTC+AGG | - | chr5_1:7554285-7554304 | Msa0714760:five_prime_UTR | 25.0% |
| ! | TGCAAAATTCGATTAAATGA+GGG | - | chr5_1:7554784-7554803 | Msa0714760:intron | 25.0% |
| ! | ATAGAATATCGAAATTCTCT+AGG | + | chr5_1:7554924-7554943 | None:intergenic | 25.0% |
| CAATGACAACATTATCAAAC+AGG | + | chr5_1:7550015-7550034 | None:intergenic | 30.0% | |
| TCAAGAATTGAAGACTTTGA+TGG | + | chr5_1:7550180-7550199 | None:intergenic | 30.0% | |
| AGACATTAACAAACAGATTG+AGG | + | chr5_1:7550270-7550289 | None:intergenic | 30.0% | |
| TTAAGAAACTAAACGCAAAG+TGG | - | chr5_1:7550362-7550381 | Msa0714760:CDS | 30.0% | |
| TAAGAAACTAAACGCAAAGT+GGG | - | chr5_1:7550363-7550382 | Msa0714760:CDS | 30.0% | |
| GTCTCCAATTTCAACATATT+TGG | - | chr5_1:7550443-7550462 | Msa0714760:intron | 30.0% | |
| TCCAATTTCAACATATTTGG+TGG | - | chr5_1:7550446-7550465 | Msa0714760:intron | 30.0% | |
| TATATTGACGTTTGAAGAAG+AGG | - | chr5_1:7550479-7550498 | Msa0714760:intron | 30.0% | |
| ATATTGACGTTTGAAGAAGA+GGG | - | chr5_1:7550480-7550499 | Msa0714760:intron | 30.0% | |
| TTTCTGATTTCTGTTCACAT+TGG | - | chr5_1:7550595-7550614 | Msa0714760:intron | 30.0% | |
| GTGCCATAAACTAATAAAGA+GGG | + | chr5_1:7550678-7550697 | None:intergenic | 30.0% | |
| TGTGCCATAAACTAATAAAG+AGG | + | chr5_1:7550679-7550698 | None:intergenic | 30.0% | |
| CTTACTAAGGGTTGTTATAT+TGG | - | chr5_1:7550792-7550811 | Msa0714760:CDS | 30.0% | |
| GAAGAATTAAGCTATCAAGT+AGG | - | chr5_1:7550888-7550907 | Msa0714760:intron | 30.0% | |
| AAATTGTGTACAACCGTAAT+TGG | - | chr5_1:7550940-7550959 | Msa0714760:five_prime_UTR | 30.0% | |
| !! | TATTGATGATGATGTTGAAC+AGG | - | chr5_1:7551118-7551137 | Msa0714760:five_prime_UTR | 30.0% |
| GGAAAGATCTTGAAATACAT+GGG | - | chr5_1:7551204-7551223 | Msa0714760:intron | 30.0% | |
| TATTTAAAAACACAGGAAGG+TGG | + | chr5_1:7551522-7551541 | None:intergenic | 30.0% | |
| ATTCATGTTGTCTAAGCATT+TGG | - | chr5_1:7551630-7551649 | Msa0714760:intron | 30.0% | |
| ! | TTTTTAACAGAGTTCAACTG+CGG | - | chr5_1:7551724-7551743 | Msa0714760:intron | 30.0% |
| CGGACTGATAGTTATATAAA+AGG | + | chr5_1:7551807-7551826 | None:intergenic | 30.0% | |
| AATAGAGTAGACATCAAACT+TGG | + | chr5_1:7552103-7552122 | None:intergenic | 30.0% | |
| !!! | ATGACTGTTTTTTCTTCTAG+TGG | - | chr5_1:7552190-7552209 | Msa0714760:five_prime_UTR | 30.0% |
| !!! | TGACTGTTTTTTCTTCTAGT+GGG | - | chr5_1:7552191-7552210 | Msa0714760:five_prime_UTR | 30.0% |
| AAAACTGGGAAAAAGTTGAA+GGG | - | chr5_1:7552439-7552458 | Msa0714760:five_prime_UTR | 30.0% | |
| ATCTATAAGAGAATTCAGCA+GGG | + | chr5_1:7552790-7552809 | None:intergenic | 30.0% | |
| ATAGAAGTTCTCTTGATTTC+AGG | - | chr5_1:7552926-7552945 | Msa0714760:intron | 30.0% | |
| ! | TTGATTCCGTCAAGTATTTT+AGG | - | chr5_1:7553067-7553086 | Msa0714760:five_prime_UTR | 30.0% |
| ! | CCCTTTTGTTACAAAAATCA+AGG | + | chr5_1:7553267-7553286 | None:intergenic | 30.0% |
| ! | ACCAACGACAATATTTTCTT+CGG | + | chr5_1:7553518-7553537 | None:intergenic | 30.0% |
| AAAGAAATGGTCATGTATGT+TGG | + | chr5_1:7553545-7553564 | None:intergenic | 30.0% | |
| TTTCAGTAGGAAGAAAGAAA+TGG | + | chr5_1:7553558-7553577 | None:intergenic | 30.0% | |
| TTTCTTTCTTCCTACTGAAA+AGG | - | chr5_1:7553558-7553577 | Msa0714760:intron | 30.0% | |
| TTCTTTCTTCCTACTGAAAA+GGG | - | chr5_1:7553559-7553578 | Msa0714760:intron | 30.0% | |
| ! | TTTTTCCCCTAACTTCTATT+AGG | - | chr5_1:7553914-7553933 | Msa0714760:intron | 30.0% |
| ! | AAGTGTGTTGATCATAACTA+TGG | + | chr5_1:7554173-7554192 | None:intergenic | 30.0% |
| ! | TCATTATGTTTAGTGTTGGA+GGG | + | chr5_1:7554328-7554347 | None:intergenic | 30.0% |
| ! | ATCATTATGTTTAGTGTTGG+AGG | + | chr5_1:7554329-7554348 | None:intergenic | 30.0% |
| AGAGTAGATTGTTTGGAAAT+AGG | - | chr5_1:7554359-7554378 | Msa0714760:intron | 30.0% | |
| GAGTAGATTGTTTGGAAATA+GGG | - | chr5_1:7554360-7554379 | Msa0714760:intron | 30.0% | |
| AATCATCATAGAGGAATACT+TGG | + | chr5_1:7554443-7554462 | None:intergenic | 30.0% | |
| !!! | TTGAACAGTTTTGAGTTAAC+TGG | + | chr5_1:7554510-7554529 | None:intergenic | 30.0% |
| ! | TATGATCAACAATCTAGCTT+AGG | + | chr5_1:7554622-7554641 | None:intergenic | 30.0% |
| ! | TTCTTGATTTGAGAACAGTT+TGG | + | chr5_1:7554742-7554761 | None:intergenic | 30.0% |
| ! | TAATCGAATTTTGCACTTAC+TGG | + | chr5_1:7554779-7554798 | None:intergenic | 30.0% |
| GTGCAAAATTCGATTAAATG+AGG | - | chr5_1:7554783-7554802 | Msa0714760:intron | 30.0% | |
| ! | ACCATATCTTTTTACAATGC+TGG | + | chr5_1:7554813-7554832 | None:intergenic | 30.0% |
| TGAGACTTGAATTGAATAGT+TGG | + | chr5_1:7555487-7555506 | None:intergenic | 30.0% | |
| CATTAACAAACAGATTGAGG+AGG | + | chr5_1:7550267-7550286 | None:intergenic | 35.0% | |
| AAACTCACCAATAGTTTCCT+GGG | - | chr5_1:7550419-7550438 | Msa0714760:CDS | 35.0% | |
| GCCACCAAATATGTTGAAAT+TGG | + | chr5_1:7550450-7550469 | None:intergenic | 35.0% | |
| ! | ATTTCAACATATTTGGTGGC+AGG | - | chr5_1:7550450-7550469 | Msa0714760:intron | 35.0% |
| GTTATATTGGTGCGAATACT+TGG | - | chr5_1:7550805-7550824 | Msa0714760:CDS | 35.0% | |
| TCTTCAAAACATCTCTTTCG+TGG | + | chr5_1:7550873-7550892 | None:intergenic | 35.0% | |
| AGAGTAGTATTTAGTCAGGA+GGG | - | chr5_1:7551152-7551171 | Msa0714760:five_prime_UTR | 35.0% | |
| AGTTGCTCAAAAGATATCAG+AGG | - | chr5_1:7551178-7551197 | Msa0714760:five_prime_UTR | 35.0% | |
| GGGAAAGATCTTGAAATACA+TGG | - | chr5_1:7551203-7551222 | Msa0714760:intron | 35.0% | |
| GATGACAGACAACAATTCAA+TGG | - | chr5_1:7551226-7551245 | Msa0714760:intron | 35.0% | |
| TCCAATTCCTATTGATGTAG+AGG | - | chr5_1:7551298-7551317 | Msa0714760:five_prime_UTR | 35.0% | |
| TCCTCTACATCAATAGGAAT+TGG | + | chr5_1:7551302-7551321 | None:intergenic | 35.0% | |
| TGTTTGTCCTCTACATCAAT+AGG | + | chr5_1:7551308-7551327 | None:intergenic | 35.0% | |
| AGACGGAATTTAATTCAACC+AGG | - | chr5_1:7551328-7551347 | Msa0714760:intron | 35.0% | |
| GGAATTTAATTCAACCAGGA+GGG | - | chr5_1:7551332-7551351 | Msa0714760:intron | 35.0% | |
| GAATTTAATTCAACCAGGAG+GGG | - | chr5_1:7551333-7551352 | Msa0714760:intron | 35.0% | |
| !!! | TGCTTCTGTTGATTAGCTTT+TGG | + | chr5_1:7551384-7551403 | None:intergenic | 35.0% |
| TTTGGTTATTTGATCATGGG+TGG | + | chr5_1:7551457-7551476 | None:intergenic | 35.0% | |
| ACATTGATCTGTTTAGGCAT+TGG | - | chr5_1:7551541-7551560 | Msa0714760:five_prime_UTR | 35.0% | |
| ! | TTTTAACAGAGTTCAACTGC+GGG | - | chr5_1:7551725-7551744 | Msa0714760:intron | 35.0% |
| ! | CGAAAAGTCTTATCTCTAAG+TGG | + | chr5_1:7552398-7552417 | None:intergenic | 35.0% |
| GAAAACTGGGAAAAAGTTGA+AGG | - | chr5_1:7552438-7552457 | Msa0714760:five_prime_UTR | 35.0% | |
| !! | TAATTTTAAGGGAACATGGC+AGG | + | chr5_1:7552583-7552602 | None:intergenic | 35.0% |
| TCGAATTACTGCAAAATTGC+AGG | - | chr5_1:7552664-7552683 | Msa0714760:intron | 35.0% | |
| GAAAGTGAATAAGCAGTTTC+TGG | - | chr5_1:7552742-7552761 | Msa0714760:five_prime_UTR | 35.0% | |
| GATCTATAAGAGAATTCAGC+AGG | + | chr5_1:7552791-7552810 | None:intergenic | 35.0% | |
| TAGATCAAGAGTAAGTTCAG+TGG | - | chr5_1:7552805-7552824 | Msa0714760:five_prime_UTR | 35.0% | |
| ! | TTTAGTTCAGAAGAAGCAAC+TGG | + | chr5_1:7552858-7552877 | None:intergenic | 35.0% |
| CTTCTGTTTAAGCTGATTGA+AGG | - | chr5_1:7552954-7552973 | Msa0714760:intron | 35.0% | |
| TTCAGGCCTAAAATACTTGA+CGG | + | chr5_1:7553076-7553095 | None:intergenic | 35.0% | |
| !! | AGTATTTTAGGCCTGAAAGA+AGG | - | chr5_1:7553079-7553098 | Msa0714760:five_prime_UTR | 35.0% |
| CAATATCTCATGGTAAACGA+AGG | + | chr5_1:7553130-7553149 | None:intergenic | 35.0% | |
| CTTCGTTTACCATGAGATAT+TGG | - | chr5_1:7553128-7553147 | Msa0714760:five_prime_UTR | 35.0% | |
| !! | GTTTCTCAACTTGCTACATA+TGG | - | chr5_1:7553287-7553306 | Msa0714760:intron | 35.0% |
| TAATCATCCCCTTTCTTTGA+AGG | + | chr5_1:7553322-7553341 | None:intergenic | 35.0% | |
| ACCGAAGAAAATATTGTCGT+TGG | - | chr5_1:7553514-7553533 | Msa0714760:five_prime_UTR | 35.0% | |
| TCTTTCTTCCTACTGAAAAG+GGG | - | chr5_1:7553560-7553579 | Msa0714760:intron | 35.0% | |
| TTTCGTTTGCCATACTTTGA+AGG | - | chr5_1:7553601-7553620 | Msa0714760:intron | 35.0% | |
| ATGTCTATCTTGTCATCCAA+TGG | - | chr5_1:7553780-7553799 | Msa0714760:intron | 35.0% | |
| TGTCTATCTTGTCATCCAAT+GGG | - | chr5_1:7553781-7553800 | Msa0714760:intron | 35.0% | |
| GAAGTTAGGGGAAAAAGAAA+AGG | + | chr5_1:7553910-7553929 | None:intergenic | 35.0% | |
| CCAAAATATATTGCCTACCA+GGG | - | chr5_1:7553941-7553960 | Msa0714760:intron | 35.0% | |
| AATATTGCAAGTGAGCTATG+AGG | + | chr5_1:7553974-7553993 | None:intergenic | 35.0% | |
| CACTGAATGCAAGAAATTTC+AGG | - | chr5_1:7554043-7554062 | Msa0714760:five_prime_UTR | 35.0% | |
| ! | AGAAATTTCAGGAGTGTGAA+AGG | - | chr5_1:7554054-7554073 | Msa0714760:five_prime_UTR | 35.0% |
| GATCAACACACTTCAAAGAA+TGG | - | chr5_1:7554180-7554199 | Msa0714760:five_prime_UTR | 35.0% | |
| ! | CATTATGTTTAGTGTTGGAG+GGG | + | chr5_1:7554327-7554346 | None:intergenic | 35.0% |
| TTCCAAACAATCTACTCTCA+AGG | + | chr5_1:7554357-7554376 | None:intergenic | 35.0% | |
| ATGGTAGAGAATCATCATAG+AGG | + | chr5_1:7554452-7554471 | None:intergenic | 35.0% | |
| !! | TCATTTTGAGTCATCGCATT+AGG | + | chr5_1:7554484-7554503 | None:intergenic | 35.0% |
| AGTATGTCAATCTGAGAATC+AGG | - | chr5_1:7554534-7554553 | Msa0714760:intron | 35.0% | |
| !! | CTTATTGACTTACACACAGA+TGG | - | chr5_1:7554642-7554661 | Msa0714760:five_prime_UTR | 35.0% |
| GCCAGCATTGTAAAAAGATA+TGG | - | chr5_1:7554809-7554828 | Msa0714760:intron | 35.0% | |
| TTATACTAACTTCTCACTCC+AGG | - | chr5_1:7554833-7554852 | Msa0714760:intron | 35.0% | |
| TTTCCAAAACTTCAGCTCTA+CGG | + | chr5_1:7555115-7555134 | None:intergenic | 35.0% | |
| ATTCAATGGTTGAGAACCTA+AGG | - | chr5_1:7555460-7555479 | Msa0714760:five_prime_UTR | 35.0% | |
| GAATTGAATAGTTGGACCTT+AGG | + | chr5_1:7555479-7555498 | None:intergenic | 35.0% | |
| ACTTTCTGATTGTGCTTCCT+TGG | - | chr5_1:7549972-7549991 | Msa0714760:three_prime_UTR | 40.0% | |
| ACACTTCTCAACAAGTACCA+AGG | + | chr5_1:7549992-7550011 | None:intergenic | 40.0% | |
| ACAAACTCCTTCACATCAGA+AGG | - | chr5_1:7550056-7550075 | Msa0714760:three_prime_UTR | 40.0% | |
| ACTCATACCTTCTGATGTGA+AGG | + | chr5_1:7550066-7550085 | None:intergenic | 40.0% | |
| TCAACTTCAATTTGGACTCG+TGG | - | chr5_1:7550120-7550139 | Msa0714760:intron | 40.0% | |
| ACTCGTGGTTAGATACAAGA+TGG | - | chr5_1:7550135-7550154 | Msa0714760:intron | 40.0% | |
| GGTTAGATACAAGATGGTCA+AGG | - | chr5_1:7550141-7550160 | Msa0714760:intron | 40.0% | |
| GAAACTCACCAATAGTTTCC+TGG | - | chr5_1:7550418-7550437 | Msa0714760:CDS | 40.0% | |
| AAGCGAGAAGATGCTTACTA+AGG | - | chr5_1:7550779-7550798 | Msa0714760:CDS | 40.0% | |
| AGCGAGAAGATGCTTACTAA+GGG | - | chr5_1:7550780-7550799 | Msa0714760:CDS | 40.0% | |
| CGAGAAATTTGCACCTATTG+TGG | - | chr5_1:7551034-7551053 | Msa0714760:five_prime_UTR | 40.0% | |
| ! | ATTTACCGATGCTGCTTCAA+AGG | - | chr5_1:7551067-7551086 | Msa0714760:five_prime_UTR | 40.0% |
| !! | ACAAACCTTTGAAGCAGCAT+CGG | + | chr5_1:7551075-7551094 | None:intergenic | 40.0% |
| GATGTTGAACAGGACATACA+AGG | - | chr5_1:7551128-7551147 | Msa0714760:five_prime_UTR | 40.0% | |
| AGGCAGAGTAGTATTTAGTC+AGG | - | chr5_1:7551148-7551167 | Msa0714760:five_prime_UTR | 40.0% | |
| CAGAGTAGTATTTAGTCAGG+AGG | - | chr5_1:7551151-7551170 | Msa0714760:five_prime_UTR | 40.0% | |
| GAGTAGTATTTAGTCAGGAG+GGG | - | chr5_1:7551153-7551172 | Msa0714760:five_prime_UTR | 40.0% | |
| TGCTCAAAAGATATCAGAGG+AGG | - | chr5_1:7551181-7551200 | Msa0714760:five_prime_UTR | 40.0% | |
| GCTCAAAAGATATCAGAGGA+GGG | - | chr5_1:7551182-7551201 | Msa0714760:five_prime_UTR | 40.0% | |
| CTCAAAAGATATCAGAGGAG+GGG | - | chr5_1:7551183-7551202 | Msa0714760:five_prime_UTR | 40.0% | |
| ! | AATTGGAAGCTGGCTTATGA+GGG | + | chr5_1:7551285-7551304 | None:intergenic | 40.0% |
| CATCAATAGGAATTGGAAGC+TGG | + | chr5_1:7551295-7551314 | None:intergenic | 40.0% | |
| GATGTAGAGGACAAACAAGA+CGG | - | chr5_1:7551311-7551330 | Msa0714760:five_prime_UTR | 40.0% | |
| CGGAATTTAATTCAACCAGG+AGG | - | chr5_1:7551331-7551350 | Msa0714760:intron | 40.0% | |
| TCTGAAAAAGCAATCCGTTC+AGG | - | chr5_1:7551488-7551507 | Msa0714760:five_prime_UTR | 40.0% | |
| ATGCATGACTCCAAAACTGT+AGG | - | chr5_1:7551930-7551949 | Msa0714760:five_prime_UTR | 40.0% | |
| ! | GCAACTACAACCTACAGTTT+TGG | + | chr5_1:7551943-7551962 | None:intergenic | 40.0% |
| GTTATCTGTTGACAACCAAC+TGG | - | chr5_1:7551987-7552006 | Msa0714760:five_prime_UTR | 40.0% | |
| AGTGGGATGAATGCAATAGA+TGG | - | chr5_1:7552208-7552227 | Msa0714760:five_prime_UTR | 40.0% | |
| AATGCATGTTCCCTTACCAA+AGG | - | chr5_1:7552326-7552345 | Msa0714760:intron | 40.0% | |
| TCATGCAAGAGAGAGAAAAC+TGG | - | chr5_1:7552424-7552443 | Msa0714760:five_prime_UTR | 40.0% | |
| CATGCAAGAGAGAGAAAACT+GGG | - | chr5_1:7552425-7552444 | Msa0714760:five_prime_UTR | 40.0% | |
| AGGGAATGAGAATCTTGATG+AGG | - | chr5_1:7552458-7552477 | Msa0714760:five_prime_UTR | 40.0% | |
| ! | GGAGCAGATGTATGCATTTT+TGG | - | chr5_1:7552975-7552994 | Msa0714760:intron | 40.0% |
| !!! | CATTTTTGGAATGTACGTCC+AGG | - | chr5_1:7552989-7553008 | Msa0714760:intron | 40.0% |
| TGCATTCAGAGTCAAATTCC+TGG | + | chr5_1:7553010-7553029 | None:intergenic | 40.0% | |
| ! | ATGGTAAACGAAGGTACGAA+GGG | + | chr5_1:7553121-7553140 | None:intergenic | 40.0% |
| AGAAACAAAAGACAGACCAG+CGG | + | chr5_1:7553399-7553418 | None:intergenic | 40.0% | |
| !!! | ACTCTCTTTTTCGAAGGTCT+TGG | + | chr5_1:7553659-7553678 | None:intergenic | 40.0% |
| ! | ACCTTCGAAAAAGAGAGTGT+AGG | - | chr5_1:7553661-7553680 | Msa0714760:intron | 40.0% |
| !!! | TCCTACACTCTCTTTTTCGA+AGG | + | chr5_1:7553665-7553684 | None:intergenic | 40.0% |
| TCCCCTAACTTCTATTAGGT+TGG | - | chr5_1:7553918-7553937 | Msa0714760:intron | 40.0% | |
| GCCAACCTAATAGAAGTTAG+GGG | + | chr5_1:7553922-7553941 | None:intergenic | 40.0% | |
| GGCCAACCTAATAGAAGTTA+GGG | + | chr5_1:7553923-7553942 | None:intergenic | 40.0% | |
| TGGCCAACCTAATAGAAGTT+AGG | + | chr5_1:7553924-7553943 | None:intergenic | 40.0% | |
| GCCAAAATATATTGCCTACC+AGG | - | chr5_1:7553940-7553959 | Msa0714760:intron | 40.0% | |
| ! | CCCTGGTAGGCAATATATTT+TGG | + | chr5_1:7553944-7553963 | None:intergenic | 40.0% |
| ACACACTTCAAAGAATGGTG+AGG | - | chr5_1:7554185-7554204 | Msa0714760:five_prime_UTR | 40.0% | |
| GTCCTTGAGAGTAGATTGTT+TGG | - | chr5_1:7554352-7554371 | Msa0714760:five_prime_UTR | 40.0% | |
| CAAACTGAAACTGAGACTTC+TGG | + | chr5_1:7554405-7554424 | None:intergenic | 40.0% | |
| TCGCATTAGGATTGTGTAGA+TGG | + | chr5_1:7554471-7554490 | None:intergenic | 40.0% | |
| !! | GCACTGATTTCTGTTCTACA+TGG | + | chr5_1:7555079-7555098 | None:intergenic | 40.0% |
| ! | CATGGACTGAATCAGCATCA+AGG | + | chr5_1:7550089-7550108 | None:intergenic | 45.0% |
| GCATTTGAGTCGCTTCTTAC+TGG | + | chr5_1:7550233-7550252 | None:intergenic | 45.0% | |
| AGCGACTCAAATGCAAGAAG+CGG | - | chr5_1:7550239-7550258 | Msa0714760:intron | 45.0% | |
| GAAACTAAACGCAAAGTGGG+AGG | - | chr5_1:7550366-7550385 | Msa0714760:CDS | 45.0% | |
| TGTTGAAATTGGAGACTCCC+AGG | + | chr5_1:7550439-7550458 | None:intergenic | 45.0% | |
| AAGTAGGATTCTCCACAGAC+TGG | - | chr5_1:7550904-7550923 | Msa0714760:intron | 45.0% | |
| ! | GAATTGGAAGCTGGCTTATG+AGG | + | chr5_1:7551286-7551305 | None:intergenic | 45.0% |
| ATGGGTGGACAGATCAATCA+AGG | + | chr5_1:7551442-7551461 | None:intergenic | 45.0% | |
| AGGTGGTGTACTAACCTGAA+CGG | + | chr5_1:7551505-7551524 | None:intergenic | 45.0% | |
| TCAGCAGGGTAATTCTCATC+TGG | + | chr5_1:7552042-7552061 | None:intergenic | 45.0% | |
| GAATTAGCCGCCTTTGGTAA+GGG | + | chr5_1:7552339-7552358 | None:intergenic | 45.0% | |
| AGAATTAGCCGCCTTTGGTA+AGG | + | chr5_1:7552340-7552359 | None:intergenic | 45.0% | |
| TTACCAAAGGCGGCTAATTC+TGG | - | chr5_1:7552339-7552358 | Msa0714760:intron | 45.0% | |
| TGGTCACTTAGCACTGTTCT+TGG | + | chr5_1:7552378-7552397 | None:intergenic | 45.0% | |
| AGTTCAGAAGAAGCAACTGG+TGG | + | chr5_1:7552855-7552874 | None:intergenic | 45.0% | |
| !! | TGCATACACAAGCGCTGATT+GGG | + | chr5_1:7553038-7553057 | None:intergenic | 45.0% |
| !! | ATGCATACACAAGCGCTGAT+TGG | + | chr5_1:7553039-7553058 | None:intergenic | 45.0% |
| CCACACTTTGTCCTTCTTTC+AGG | + | chr5_1:7553093-7553112 | None:intergenic | 45.0% | |
| CCTGAAAGAAGGACAAAGTG+TGG | - | chr5_1:7553090-7553109 | Msa0714760:five_prime_UTR | 45.0% | |
| ! | CATGGTAAACGAAGGTACGA+AGG | + | chr5_1:7553122-7553141 | None:intergenic | 45.0% |
| ACCTGTGCTCCTTCAAAGAA+AGG | - | chr5_1:7553310-7553329 | Msa0714760:intron | 45.0% | |
| CCTGTGCTCCTTCAAAGAAA+GGG | - | chr5_1:7553311-7553330 | Msa0714760:intron | 45.0% | |
| CTGTGCTCCTTCAAAGAAAG+GGG | - | chr5_1:7553312-7553331 | Msa0714760:intron | 45.0% | |
| ! | TTCGGAGTCTTTTGCTCTTC+GGG | + | chr5_1:7553361-7553380 | None:intergenic | 45.0% |
| ! | CTTCGGAGTCTTTTGCTCTT+CGG | + | chr5_1:7553362-7553381 | None:intergenic | 45.0% |
| CGGCGTAGCTTATCATTCTT+CGG | + | chr5_1:7553379-7553398 | None:intergenic | 45.0% | |
| ! | TTGGAGTTCCCCTTTTCAGT+AGG | + | chr5_1:7553571-7553590 | None:intergenic | 45.0% |
| TACTGAAAAGGGGAACTCCA+AGG | - | chr5_1:7553570-7553589 | Msa0714760:intron | 45.0% | |
| CAAACGAAAAGCTGTCACCT+TGG | + | chr5_1:7553590-7553609 | None:intergenic | 45.0% | |
| CAGCAGTCTCCTTCAAAGTA+TGG | + | chr5_1:7553613-7553632 | None:intergenic | 45.0% | |
| ! | CATACTTTGAAGGAGACTGC+TGG | - | chr5_1:7553611-7553630 | Msa0714760:intron | 45.0% |
| ATCACCAGAGTCTCTTTGGA+AGG | + | chr5_1:7553751-7553770 | None:intergenic | 45.0% | |
| TTGCATCACCAGAGTCTCTT+TGG | + | chr5_1:7553755-7553774 | None:intergenic | 45.0% | |
| ! | ATGAGGAAGTTTTCCCTGGT+AGG | + | chr5_1:7553957-7553976 | None:intergenic | 45.0% |
| ! | AGCTATGAGGAAGTTTTCCC+TGG | + | chr5_1:7553961-7553980 | None:intergenic | 45.0% |
| TCCCAGACACTATCACTTCA+CGG | + | chr5_1:7554010-7554029 | None:intergenic | 45.0% | |
| TGAGGTGCATACACTTTGTC+AGG | - | chr5_1:7554203-7554222 | Msa0714760:five_prime_UTR | 45.0% | |
| GGAGGGGATATCATCAACAA+CGG | + | chr5_1:7554311-7554330 | None:intergenic | 45.0% | |
| TAGAGGAATACTTGGCACGA+CGG | + | chr5_1:7554435-7554454 | None:intergenic | 45.0% | |
| GAACAGTTTGGATGAGAGCA+TGG | + | chr5_1:7554730-7554749 | None:intergenic | 45.0% | |
| CTCCAGGAATTGCAAAGACT+CGG | - | chr5_1:7554849-7554868 | Msa0714760:intron | 45.0% | |
| TTCCGAGTCTTTGCAATTCC+TGG | + | chr5_1:7554854-7554873 | None:intergenic | 45.0% | |
| AATGTAGAATACCACGCTGC+AGG | - | chr5_1:7554872-7554891 | Msa0714760:intron | 45.0% | |
| ! | TTGCCGTAGAGCTGAAGTTT+TGG | - | chr5_1:7555109-7555128 | Msa0714760:five_prime_UTR | 45.0% |
| !!! | GCTGAAGTTTTGGAAAGCGA+TGG | - | chr5_1:7555119-7555138 | Msa0714760:five_prime_UTR | 45.0% |
| GCGACTCAAATGCAAGAAGC+GGG | - | chr5_1:7550240-7550259 | Msa0714760:intron | 50.0% | |
| GGAGACTCCCAGGAAACTAT+TGG | + | chr5_1:7550429-7550448 | None:intergenic | 50.0% | |
| TAGGATTCTCCACAGACTGG+CGG | - | chr5_1:7550907-7550926 | Msa0714760:intron | 50.0% | |
| AGAATGATACCGCCAGTCTG+TGG | + | chr5_1:7550919-7550938 | None:intergenic | 50.0% | |
| ACTGCTTCTTCACTGCCAGT+TGG | + | chr5_1:7552005-7552024 | None:intergenic | 50.0% | |
| GGCAGTGAAGAAGCAGTTTC+TGG | - | chr5_1:7552008-7552027 | Msa0714760:intron | 50.0% | |
| GCATGTTCCCTTACCAAAGG+CGG | - | chr5_1:7552329-7552348 | Msa0714760:intron | 50.0% | |
| ! | GTTTCTGGACATCATCCCAG+AGG | - | chr5_1:7552757-7552776 | Msa0714760:five_prime_UTR | 50.0% |
| CAGCAGGGTAATTCTCCTCT+GGG | + | chr5_1:7552775-7552794 | None:intergenic | 50.0% | |
| TCAGCAGGGTAATTCTCCTC+TGG | + | chr5_1:7552776-7552795 | None:intergenic | 50.0% | |
| ! | CCCTTTCTTTGAAGGAGCAC+AGG | + | chr5_1:7553314-7553333 | None:intergenic | 50.0% |
| ! | GAGTCTTTTGCTCTTCGGGA+TGG | + | chr5_1:7553357-7553376 | None:intergenic | 50.0% |
| AGAATGATAAGCTACGCCGC+TGG | - | chr5_1:7553380-7553399 | Msa0714760:intron | 50.0% | |
| TTTGAAGGAGACTGCTGGTG+TGG | - | chr5_1:7553616-7553635 | Msa0714760:intron | 50.0% | |
| ! | CTGCTGGTGTGGTAATGCTA+TGG | - | chr5_1:7553627-7553646 | Msa0714760:intron | 50.0% |
| ! | CAGAGTCTCTTTGGAAGGCT+TGG | + | chr5_1:7553746-7553765 | None:intergenic | 50.0% |
| CAAGCCTTCCAAAGAGACTC+TGG | - | chr5_1:7553744-7553763 | Msa0714760:five_prime_UTR | 50.0% | |
| ! | TGCCGTGAAGTGATAGTGTC+TGG | - | chr5_1:7554005-7554024 | Msa0714760:five_prime_UTR | 50.0% |
| ! | GCCGTGAAGTGATAGTGTCT+GGG | - | chr5_1:7554006-7554025 | Msa0714760:five_prime_UTR | 50.0% |
| ! | TGATAGTGTCTGGGAAGCGA+TGG | - | chr5_1:7554015-7554034 | Msa0714760:five_prime_UTR | 50.0% |
| ATGGCTCAGCATTACTTGCC+CGG | + | chr5_1:7554711-7554730 | None:intergenic | 50.0% | |
| ATTGTAACACACCTGCAGCG+TGG | + | chr5_1:7554886-7554905 | None:intergenic | 50.0% | |
| GAAAGCGATGGAGCAATCGT+TGG | - | chr5_1:7555131-7555150 | Msa0714760:five_prime_UTR | 50.0% | |
| CTTGAGAATCTGTCCCCTCC+TGG | + | chr5_1:7551349-7551368 | None:intergenic | 55.0% | |
| GCACCAGAATTAGCCGCCTT+TGG | + | chr5_1:7552345-7552364 | None:intergenic | 55.0% | |
| ! | GGCGGCTAATTCTGGTGCTA+AGG | - | chr5_1:7552347-7552366 | Msa0714760:intron | 55.0% |
| ATGCATCTCAATGCCGCCGC+CGG | - | chr5_1:7554689-7554708 | Msa0714760:five_prime_UTR | 60.0% | |
| GCTCAGCATTACTTGCCCGG+CGG | + | chr5_1:7554708-7554727 | None:intergenic | 60.0% | |
| TGCATCTCAATGCCGCCGCC+GGG | - | chr5_1:7554690-7554709 | Msa0714760:five_prime_UTR | 65.0% | |
| CAGCATTACTTGCCCGGCGG+CGG | + | chr5_1:7554705-7554724 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 7549963 | 7555549 | 7549963 | ID=Msa0714760;Name=Msa0714760 |
| chr5_1 | mRNA | 7549963 | 7555549 | 7549963 | ID=Msa0714760-mRNA-1;Parent=Msa0714760;Name=Msa0714760-mRNA-1;_AED=0.20;_eAED=0.20;_QI=2797|1|1|1|0.56|0.47|17|300|109 |
| chr5_1 | exon | 7549963 | 7550091 | 7549963 | ID=Msa0714760-mRNA-1:exon:3176;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7550160 | 7550233 | 7550160 | ID=Msa0714760-mRNA-1:exon:3175;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7550255 | 7550448 | 7550255 | ID=Msa0714760-mRNA-1:exon:3174;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7550619 | 7550851 | 7550619 | ID=Msa0714760-mRNA-1:exon:3173;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7550940 | 7551205 | 7550940 | ID=Msa0714760-mRNA-1:exon:3172;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7551288 | 7551345 | 7551288 | ID=Msa0714760-mRNA-1:exon:3171;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7551437 | 7551576 | 7551437 | ID=Msa0714760-mRNA-1:exon:3170;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7551735 | 7552023 | 7551735 | ID=Msa0714760-mRNA-1:exon:3169;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7552111 | 7552256 | 7552111 | ID=Msa0714760-mRNA-1:exon:3168;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7552363 | 7552564 | 7552363 | ID=Msa0714760-mRNA-1:exon:3167;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7552698 | 7552826 | 7552698 | ID=Msa0714760-mRNA-1:exon:3166;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7553033 | 7553302 | 7553033 | ID=Msa0714760-mRNA-1:exon:3165;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7553432 | 7553560 | 7553432 | ID=Msa0714760-mRNA-1:exon:3164;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7553738 | 7553778 | 7553738 | ID=Msa0714760-mRNA-1:exon:3163;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7554003 | 7554372 | 7554003 | ID=Msa0714760-mRNA-1:exon:3162;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7554536 | 7554753 | 7554536 | ID=Msa0714760-mRNA-1:exon:3161;Parent=Msa0714760-mRNA-1 |
| chr5_1 | exon | 7555011 | 7555549 | 7555011 | ID=Msa0714760-mRNA-1:exon:3160;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7555011 | 7555549 | 7555011 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7554536 | 7554753 | 7554536 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7554003 | 7554372 | 7554003 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7553738 | 7553778 | 7553738 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7553432 | 7553560 | 7553432 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7553033 | 7553302 | 7553033 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7552698 | 7552826 | 7552698 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7552363 | 7552564 | 7552363 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7552111 | 7552256 | 7552111 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7551735 | 7552023 | 7551735 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7551437 | 7551576 | 7551437 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7551288 | 7551345 | 7551288 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | five_prime_UTR | 7550940 | 7551205 | 7550940 | ID=Msa0714760-mRNA-1:five_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | CDS | 7550619 | 7550851 | 7550619 | ID=Msa0714760-mRNA-1:cds;Parent=Msa0714760-mRNA-1 |
| chr5_1 | CDS | 7550352 | 7550448 | 7550352 | ID=Msa0714760-mRNA-1:cds;Parent=Msa0714760-mRNA-1 |
| chr5_1 | three_prime_UTR | 7550255 | 7550351 | 7550255 | ID=Msa0714760-mRNA-1:three_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | three_prime_UTR | 7550160 | 7550233 | 7550160 | ID=Msa0714760-mRNA-1:three_prime_utr;Parent=Msa0714760-mRNA-1 |
| chr5_1 | three_prime_UTR | 7549963 | 7550091 | 7549963 | ID=Msa0714760-mRNA-1:three_prime_utr;Parent=Msa0714760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
