Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444190 | XP_024635560.1 | 98.453 | 517 | 7 | 1 | 1 | 517 | 1 | 516 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444190 | sp|Q9M367|BECN1_ARATH | 74.659 | 513 | 123 | 2 | 10 | 515 | 1 | 513 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444190 | A0A396IM07 | 98.453 | 517 | 7 | 1 | 1 | 517 | 1 | 516 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0444190 | Msa0575010 | 0.806190 | 9.278188e-50 | -8.615850e-47 |
| Msa0444190 | Msa0654310 | 0.818233 | 2.181607e-52 | -8.615850e-47 |
| Msa0444190 | Msa0722070 | 0.805240 | 1.468607e-49 | -8.615850e-47 |
| Msa0444190 | Msa0796980 | 0.820913 | 5.335293e-53 | -8.615850e-47 |
| Msa0444190 | Msa0802830 | 0.811389 | 7.175995e-51 | -8.615850e-47 |
| Msa0444190 | Msa0842620 | 0.826893 | 2.112424e-54 | -8.615850e-47 |
| Msa0444190 | Msa0919850 | 0.800066 | 1.715666e-48 | -8.615850e-47 |
| Msa0444190 | Msa0967180 | 0.805078 | 1.587890e-49 | -8.615850e-47 |
| Msa0444190 | Msa0992280 | 0.805532 | 1.275877e-49 | -8.615850e-47 |
| Msa0444190 | Msa1006660 | 0.830465 | 2.891929e-55 | -8.615850e-47 |
| Msa0444190 | Msa1242300 | 0.802754 | 4.827818e-49 | -8.615850e-47 |
| Msa0444190 | Msa1319800 | 0.811579 | 6.525200e-51 | -8.615850e-47 |
| Msa0265670 | Msa0444190 | 0.806795 | 6.914741e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444190 | MtrunA17_Chr3g0083891 | 98.453 | 517 | 7 | 1 | 1 | 517 | 1 | 516 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444190 | AT3G61710.1 | 74.659 | 513 | 123 | 2 | 10 | 515 | 1 | 513 | 0.0 | 782 |
| Msa0444190 | AT3G61710.4 | 74.828 | 437 | 103 | 2 | 10 | 439 | 1 | 437 | 0.0 | 666 |
| Msa0444190 | AT3G61710.2 | 74.176 | 364 | 87 | 2 | 10 | 366 | 1 | 364 | 0.0 | 540 |
| Msa0444190 | AT3G61710.3 | 77.365 | 296 | 60 | 2 | 78 | 366 | 1 | 296 | 4.90e-156 | 447 |
Find 119 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGCATCTTACTGGAATTT+TGG | 0.123213 | 3_3:-17091631 | None:intergenic |
| AATATGTTATGTTCAGTTTC+TGG | 0.132096 | 3_3:-17094378 | None:intergenic |
| TGTAATAATGCTTACTTATA+AGG | 0.156640 | 3_3:-17093820 | None:intergenic |
| TATTGAAATCTATATGTTAT+TGG | 0.184409 | 3_3:+17094591 | Msa0444190:three_prime_UTR |
| TAGAACTATTTAGTTGTTAA+AGG | 0.198213 | 3_3:+17094428 | Msa0444190:three_prime_UTR |
| GGAGGAGAGAGATGCAATTT+TGG | 0.238592 | 3_3:+17091482 | Msa0444190:intron |
| GACTCTTCCATTGTCTTTCC+AGG | 0.250506 | 3_3:-17089182 | None:intergenic |
| CATAACATATTCTAGGATTT+AGG | 0.265545 | 3_3:+17094390 | Msa0444190:three_prime_UTR |
| ATTTCTCATGATGGAGAGTT+TGG | 0.268411 | 3_3:+17091576 | Msa0444190:CDS |
| GCTTTAATAAGCAGGAAAAT+TGG | 0.278141 | 3_3:+17094192 | Msa0444190:CDS |
| GATGAGAGAGACGACGAAAA+AGG | 0.286671 | 3_3:+17087459 | Msa0444190:CDS |
| ATCTAGCCGCTTCAAAGAAT+TGG | 0.303262 | 3_3:+17091027 | Msa0444190:CDS |
| TTTCCTGCTTATTAAAGCTT+TGG | 0.306193 | 3_3:-17094187 | None:intergenic |
| ATTTGAAATGGGCACTCTAT+TGG | 0.321192 | 3_3:+17094243 | Msa0444190:CDS |
| TGTGATGAGCACAACTAAAA+TGG | 0.323097 | 3_3:+17089079 | Msa0444190:CDS |
| TTGGTCCAGTCAACTTGTTT+TGG | 0.324830 | 3_3:+17093680 | Msa0444190:CDS |
| TTCCTGCTTATTAAAGCTTT+GGG | 0.325626 | 3_3:-17094186 | None:intergenic |
| AACTCTCCATCATGAGAAAT+AGG | 0.329432 | 3_3:-17091573 | None:intergenic |
| TCAGTTTCTGGATTCAGATT+TGG | 0.333866 | 3_3:-17094366 | None:intergenic |
| ACACACTCTGCAATTTGAAA+TGG | 0.335752 | 3_3:+17094231 | Msa0444190:CDS |
| TTCAACGATCCTTCTCGTTC+TGG | 0.342444 | 3_3:+17087589 | Msa0444190:CDS |
| TGGGCACTCTATTGGTTTGT+TGG | 0.352054 | 3_3:+17094251 | Msa0444190:CDS |
| TGAGCCTGAGGTCTTTGCTT+TGG | 0.359710 | 3_3:-17089122 | None:intergenic |
| CGCAATCCACTTTGCATCGT+TGG | 0.360309 | 3_3:+17087541 | Msa0444190:CDS |
| TTTGAAACATTTAGGTAGAA+TGG | 0.363731 | 3_3:+17092448 | Msa0444190:intron |
| GAAACTTCGGTCGGAAATAC+TGG | 0.365381 | 3_3:-17092524 | None:intergenic |
| TATGTTGTTCTCTTGATCCT+TGG | 0.366586 | 3_3:-17093773 | None:intergenic |
| TGGCTTCAGTACCACGCTTT+GGG | 0.368320 | 3_3:-17094346 | None:intergenic |
| AACTGAACATAACATATTCT+AGG | 0.374123 | 3_3:+17094383 | Msa0444190:exon |
| GTTTCAATTGATTTCACATC+AGG | 0.393088 | 3_3:+17091285 | Msa0444190:CDS |
| TTCCATTGTCTTTCCAGGAT+GGG | 0.403861 | 3_3:-17089177 | None:intergenic |
| AGCCTCGCTGAGGACATCTT+TGG | 0.404226 | 3_3:-17089666 | None:intergenic |
| TTGGCTTCAGTACCACGCTT+TGG | 0.410296 | 3_3:-17094347 | None:intergenic |
| GTTCTCTTGATCCTTGGACT+TGG | 0.416693 | 3_3:-17093767 | None:intergenic |
| TTGAAACATTTAGGTAGAAT+GGG | 0.417297 | 3_3:+17092449 | Msa0444190:intron |
| CGCATGCAGTCAAGGCATAA+AGG | 0.417474 | 3_3:-17089551 | None:intergenic |
| CTTCCATTGTCTTTCCAGGA+TGG | 0.419499 | 3_3:-17089178 | None:intergenic |
| CTTATTAAAGCTTTGGGTGA+TGG | 0.421070 | 3_3:-17094180 | None:intergenic |
| TGCTTGTGAAACTTCAATCT+TGG | 0.428703 | 3_3:-17091505 | None:intergenic |
| GTCTGATAAGCTTGATAAAG+AGG | 0.439310 | 3_3:+17089580 | Msa0444190:CDS |
| GGGTCGGAGTCGGAGCTTAC+CGG | 0.440354 | 3_3:+17087480 | Msa0444190:CDS |
| GAATCTGCGTCTGATGGAGG+TGG | 0.444142 | 3_3:+17089227 | Msa0444190:CDS |
| CACACTCTGCAATTTGAAAT+GGG | 0.449196 | 3_3:+17094232 | Msa0444190:CDS |
| CAAACCCATCGAGGGACGTT+CGG | 0.451867 | 3_3:-17087508 | None:intergenic |
| CAGCTCATAAGTACTGTTGC+TGG | 0.456802 | 3_3:-17093266 | None:intergenic |
| CACCCAAAGCTTTAATAAGC+AGG | 0.463428 | 3_3:+17094184 | Msa0444190:CDS |
| GGGGAAACTCGTTGTCCCCG+GGG | 0.471786 | 3_3:+17089249 | Msa0444190:CDS |
| CACACTGCTAGCACCATGAA+TGG | 0.472744 | 3_3:-17089060 | None:intergenic |
| CAATCTCAAATGCTCGAGTT+AGG | 0.472886 | 3_3:-17089331 | None:intergenic |
| GGTAACTTGAAACATTTCTC+TGG | 0.475394 | 3_3:-17093799 | None:intergenic |
| AATCTGCGTCTGATGGAGGT+GGG | 0.479078 | 3_3:+17089228 | Msa0444190:CDS |
| TGAAGCCTGTCTTAAACGCT+TGG | 0.485526 | 3_3:+17089634 | Msa0444190:CDS |
| CGCAGAATTTGCCAAGTCCA+AGG | 0.489127 | 3_3:+17093756 | Msa0444190:CDS |
| TTGCTGGTGTCTGTGATTCG+AGG | 0.493541 | 3_3:-17093250 | None:intergenic |
| CCCCTCCAAGCGTTTAAGAC+AGG | 0.494529 | 3_3:-17089639 | None:intergenic |
| ATACCATTGCTGAAAGAGGC+TGG | 0.496868 | 3_3:-17094286 | None:intergenic |
| TGGATCCGAACGTCCCTCGA+TGG | 0.506017 | 3_3:+17087503 | Msa0444190:CDS |
| TCTGCGTCTGATGGAGGTGG+GGG | 0.511593 | 3_3:+17089230 | Msa0444190:CDS |
| TATGCAGAAGAAGGCAAGCT+TGG | 0.514890 | 3_3:-17092494 | None:intergenic |
| GTGCTCCAAAACAAGTTGAC+TGG | 0.516855 | 3_3:-17093685 | None:intergenic |
| ATCTGCGTCTGATGGAGGTG+GGG | 0.520604 | 3_3:+17089229 | Msa0444190:CDS |
| CATTTGCCACCTCATAACTC+TGG | 0.520812 | 3_3:+17089287 | Msa0444190:CDS |
| CGTGGTGATACATCCCATCC+TGG | 0.530828 | 3_3:+17089164 | Msa0444190:CDS |
| AAGTCGGAATCTGCGTCTGA+TGG | 0.536084 | 3_3:+17089221 | Msa0444190:CDS |
| TAGCCGCTTCAAAGAATTGG+AGG | 0.541238 | 3_3:+17091030 | Msa0444190:CDS |
| AGCCTGTCTTAAACGCTTGG+AGG | 0.542097 | 3_3:+17089637 | Msa0444190:CDS |
| ATGCAAGGTTCATCCATTCA+TGG | 0.544986 | 3_3:+17089047 | Msa0444190:CDS |
| GGATCCGAACGTCCCTCGAT+GGG | 0.545053 | 3_3:+17087504 | Msa0444190:CDS |
| GCCTGTCTTAAACGCTTGGA+GGG | 0.547231 | 3_3:+17089638 | Msa0444190:CDS |
| GGATGAGATAAATGCTGCAT+GGG | 0.551698 | 3_3:+17092470 | Msa0444190:CDS |
| AGAAGAAAGAAGACTAGAAG+CGG | 0.552430 | 3_3:+17090940 | Msa0444190:CDS |
| CGAGGGACGTTCGGATCCAC+CGG | 0.556220 | 3_3:-17087499 | None:intergenic |
| CTTCCAGCCTCTTTCAGCAA+TGG | 0.561642 | 3_3:+17094283 | Msa0444190:CDS |
| GGCACATTGTATGCAGAAGA+AGG | 0.565635 | 3_3:-17092503 | None:intergenic |
| CTGTCTTAAACGCTTGGAGG+GGG | 0.566042 | 3_3:+17089640 | Msa0444190:CDS |
| GATGTATCACCACGAGGCCG+AGG | 0.567728 | 3_3:-17089155 | None:intergenic |
| AAGCAAAGACCTCAGGCTCA+AGG | 0.574216 | 3_3:+17089125 | Msa0444190:CDS |
| GCTCCTCCAATTCTTTGAAG+CGG | 0.574855 | 3_3:-17091033 | None:intergenic |
| TCGACGCCAACGATGCAAAG+TGG | 0.576527 | 3_3:-17087547 | None:intergenic |
| GTTGCCAAAGCAAAGACCTC+AGG | 0.579073 | 3_3:+17089118 | Msa0444190:CDS |
| TGACCACCATGATCAACCCC+CGG | 0.580351 | 3_3:-17089266 | None:intergenic |
| AGGCTCAAGGAGTTCCTCCT+CGG | 0.586199 | 3_3:+17089138 | Msa0444190:CDS |
| TGCTGGTGTCTGTGATTCGA+GGG | 0.588115 | 3_3:-17093249 | None:intergenic |
| GAATTGAATCCAGAGTTATG+AGG | 0.590276 | 3_3:-17089296 | None:intergenic |
| ATCCCATCCTGGAAAGACAA+TGG | 0.590592 | 3_3:+17089175 | Msa0444190:CDS |
| GGGTACAAAGATCCTACAGC+TGG | 0.595630 | 3_3:-17094326 | None:intergenic |
| TCAAAACTAACGAATACAAG+AGG | 0.595751 | 3_3:-17094516 | None:intergenic |
| CCTGTCTTAAACGCTTGGAG+GGG | 0.597661 | 3_3:+17089639 | Msa0444190:CDS |
| GGAGGAACTCCTTGAGCCTG+AGG | 0.598305 | 3_3:-17089134 | None:intergenic |
| CATGCTGAAGTGCCAGCTGT+AGG | 0.598389 | 3_3:+17094314 | Msa0444190:CDS |
| AATTGCAATGAAAATCTCAT+CGG | 0.598768 | 3_3:+17087426 | Msa0444190:exon |
| TCGGAATCTGCGTCTGATGG+AGG | 0.599215 | 3_3:+17089224 | Msa0444190:CDS |
| GCGAACCTGTGTCTGTGTTG+TGG | 0.599926 | 3_3:-17089354 | None:intergenic |
| ACAAAACTCGCATGCAGTCA+AGG | 0.604059 | 3_3:-17089559 | None:intergenic |
| AACTTGAAACATTTCTCTGG+TGG | 0.604430 | 3_3:-17093796 | None:intergenic |
| GGAGTTCCTCCTCGGCCTCG+TGG | 0.607193 | 3_3:+17089146 | Msa0444190:CDS |
| TGAAGTAAATGCTGAACTGA+AGG | 0.613224 | 3_3:+17090991 | Msa0444190:CDS |
| GATTGCCACAACACAGACAC+AGG | 0.618152 | 3_3:+17089349 | Msa0444190:CDS |
| ATTCGAGGGTAGCTACCCAT+AGG | 0.618428 | 3_3:-17093235 | None:intergenic |
| AAGGATACTGAAACTTCGGT+CGG | 0.619914 | 3_3:-17092533 | None:intergenic |
| GGGATGAGATAAATGCTGCA+TGG | 0.624474 | 3_3:+17092469 | Msa0444190:CDS |
| GAAGATACCATTGCTGAAAG+AGG | 0.628303 | 3_3:-17094290 | None:intergenic |
| TAAATGTGTGTAGGGATGCA+AGG | 0.633755 | 3_3:+17089032 | Msa0444190:intron |
| TCGGAGTCGGAGCTTACCGG+TGG | 0.636062 | 3_3:+17087483 | Msa0444190:CDS |
| CAAATTCTGCGAAATCCTTG+AGG | 0.638626 | 3_3:-17093744 | None:intergenic |
| CAACGATGCAAAGTGGATTG+CGG | 0.640313 | 3_3:-17087540 | None:intergenic |
| AAATCTCATCGGTGCAAGAG+AGG | 0.641636 | 3_3:+17087437 | Msa0444190:CDS |
| AGTTCTGACAAACCCATCGA+GGG | 0.647106 | 3_3:-17087516 | None:intergenic |
| AGAAACTAACCAGAACGAGA+AGG | 0.653735 | 3_3:-17087598 | None:intergenic |
| GTATCACCACGAGGCCGAGG+AGG | 0.654136 | 3_3:-17089152 | None:intergenic |
| TTGAATCCAGAGTTATGAGG+TGG | 0.665081 | 3_3:-17089293 | None:intergenic |
| GGGAAACTCGTTGTCCCCGG+GGG | 0.676353 | 3_3:+17089250 | Msa0444190:CDS |
| CAGTTCTGACAAACCCATCG+AGG | 0.678531 | 3_3:-17087517 | None:intergenic |
| TAAGAAAATCAGCCTCGCTG+AGG | 0.688641 | 3_3:-17089676 | None:intergenic |
| GGATCTTTGTACCCAAAGCG+TGG | 0.690117 | 3_3:+17094335 | Msa0444190:CDS |
| GGCCAAAGATGTCCTCAGCG+AGG | 0.702573 | 3_3:+17089664 | Msa0444190:CDS |
| GCTTCAAAGAATTGGAGGAG+CGG | 0.703613 | 3_3:+17091035 | Msa0444190:CDS |
| GATGAGATAAATGCTGCATG+GGG | 0.762402 | 3_3:+17092471 | Msa0444190:CDS |
| GGATGGGATGTATCACCACG+AGG | 0.784660 | 3_3:-17089161 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTCTTTTATTGTA+TGG | + | chr3_3:17089967-17089986 | Msa0444190:intron | 10.0% |
| !! | TAAGTAGTAAATAATTAATT+AGG | - | chr3_3:17090831-17090850 | None:intergenic | 10.0% |
| !! | TAAGTAGTAAATAATTAATT+AGG | - | chr3_3:17090831-17090850 | None:intergenic | 10.0% |
| !!! | TATTTGATCAATATTTTTTT+TGG | + | chr3_3:17091851-17091870 | Msa0444190:intron | 10.0% |
| !!! | TATACATTTTACAATTTATT+AGG | + | chr3_3:17093155-17093174 | Msa0444190:intron | 10.0% |
| !!! | TTAACTTTTTAAAATTTGTA+TGG | - | chr3_3:17093939-17093958 | None:intergenic | 10.0% |
| !!! | TGTATCAAAAATGAATTTTA+TGG | + | chr3_3:17087734-17087753 | Msa0444190:intron | 15.0% |
| !! | TTTGAATAGTATTAACATAA+TGG | + | chr3_3:17088898-17088917 | Msa0444190:intron | 15.0% |
| !!! | GTTTTAATGTTTTATGTATA+TGG | + | chr3_3:17089513-17089532 | Msa0444190:intron | 15.0% |
| !! | TTGAAAATATAATGTTGTTA+AGG | - | chr3_3:17091083-17091102 | None:intergenic | 15.0% |
| !! | AAAAAATATTGATCAAATAG+TGG | - | chr3_3:17091850-17091869 | None:intergenic | 15.0% |
| !!! | TACAACAATTTATTTTATGA+AGG | - | chr3_3:17092269-17092288 | None:intergenic | 15.0% |
| !!! | TTTTGATTTTTGAAACATTT+AGG | + | chr3_3:17092440-17092459 | Msa0444190:intron | 15.0% |
| !!! | ATTTTACAATTTATTAGGAA+TGG | + | chr3_3:17093160-17093179 | Msa0444190:intron | 15.0% |
| !! | TATTGAAATCTATATGTTAT+TGG | + | chr3_3:17094591-17094610 | Msa0444190:three_prime_UTR | 15.0% |
| !! | TTATAACAGAAGTTAAGATA+AGG | + | chr3_3:17087853-17087872 | Msa0444190:intron | 20.0% |
| !! | TTAATGCATTTAAATGTGAA+AGG | + | chr3_3:17088079-17088098 | Msa0444190:intron | 20.0% |
| !!! | ATTTTTGACAAAGAAAATAG+AGG | + | chr3_3:17088117-17088136 | Msa0444190:intron | 20.0% |
| !! | AGTATTATAACAACATAGAT+TGG | + | chr3_3:17088282-17088301 | Msa0444190:intron | 20.0% |
| !!! | GTTGTTTTTTTTAGTATGAA+AGG | + | chr3_3:17088563-17088582 | Msa0444190:intron | 20.0% |
| !!! | TTTTGTTAATGTGAATTTTG+TGG | + | chr3_3:17088625-17088644 | Msa0444190:intron | 20.0% |
| !!! | CAATTTTTAACCTTTTTTGT+TGG | + | chr3_3:17088854-17088873 | Msa0444190:intron | 20.0% |
| !! | TTCAAAATCAAAATTAGCAA+CGG | - | chr3_3:17088884-17088903 | None:intergenic | 20.0% |
| !!! | ACATAATGGTTTTATTTTTG+CGG | + | chr3_3:17088912-17088931 | Msa0444190:intron | 20.0% |
| !! | AATTCAGAATAAACCAATAT+TGG | - | chr3_3:17089903-17089922 | None:intergenic | 20.0% |
| !! | ATTTCACAACAGATTATTTA+TGG | - | chr3_3:17090012-17090031 | None:intergenic | 20.0% |
| !! | TACATATATAATTCCTACAT+AGG | - | chr3_3:17090271-17090290 | None:intergenic | 20.0% |
| !!! | TGCTTTAAATTTTGAAGTTA+TGG | + | chr3_3:17090668-17090687 | Msa0444190:intron | 20.0% |
| !!! | TTTTCTTTTATTCTTTAGTG+TGG | + | chr3_3:17091185-17091204 | Msa0444190:intron | 20.0% |
| !! | AAGATTCTCAATAAAATCTA+AGG | - | chr3_3:17091340-17091359 | None:intergenic | 20.0% |
| !!! | GATTTTTCCAAAAAATAAAC+AGG | - | chr3_3:17091415-17091434 | None:intergenic | 20.0% |
| !!! | TTGGAACAATTAACAATTTT+CGG | + | chr3_3:17091595-17091614 | Msa0444190:CDS | 20.0% |
| !! | ATATTCAAATCATCAAATGA+GGG | - | chr3_3:17092312-17092331 | None:intergenic | 20.0% |
| !! | ATCTTAAACTAGAAAGAAAA+AGG | - | chr3_3:17092392-17092411 | None:intergenic | 20.0% |
| !! | CTGATATACTTAATGAAAAA+AGG | - | chr3_3:17092555-17092574 | None:intergenic | 20.0% |
| !!! | AAAATCAACTTTTCTTTTTG+AGG | - | chr3_3:17092756-17092775 | None:intergenic | 20.0% |
| !!! | AATCAATGATTTTAAGAAGA+CGG | + | chr3_3:17092820-17092839 | Msa0444190:intron | 20.0% |
| !! | TTACTTATTAAAATCTTGCA+TGG | + | chr3_3:17092875-17092894 | Msa0444190:intron | 20.0% |
| !! | TTTCTAGATAGTATATAATG+TGG | + | chr3_3:17093014-17093033 | Msa0444190:intron | 20.0% |
| !! | GTAAAATGTATAATGAAATG+TGG | - | chr3_3:17093147-17093166 | None:intergenic | 20.0% |
| !! | TCTAAAAAGTAATGAGTTAA+GGG | - | chr3_3:17093197-17093216 | None:intergenic | 20.0% |
| !! | ATCTAAAAAGTAATGAGTTA+AGG | - | chr3_3:17093198-17093217 | None:intergenic | 20.0% |
| !! | TCGAATAAAAATAATTCCTA+TGG | + | chr3_3:17093219-17093238 | Msa0444190:CDS | 20.0% |
| !! | CGAATAAAAATAATTCCTAT+GGG | + | chr3_3:17093220-17093239 | Msa0444190:CDS | 20.0% |
| !!! | ATTACTTTTTCTCAAGTATA+TGG | + | chr3_3:17093334-17093353 | Msa0444190:intron | 20.0% |
| !!! | TTCCTCTTTCTAAAATATTT+AGG | + | chr3_3:17093393-17093412 | Msa0444190:intron | 20.0% |
| !!! | TCCTCTTTCTAAAATATTTA+GGG | + | chr3_3:17093394-17093413 | Msa0444190:intron | 20.0% |
| !! | AGTCGTAATAATATAAAATG+TGG | + | chr3_3:17093571-17093590 | Msa0444190:intron | 20.0% |
| !! | TGTAATAATGCTTACTTATA+AGG | - | chr3_3:17093823-17093842 | None:intergenic | 20.0% |
| !! | TAAGTAAGCATTATTACAAA+TGG | + | chr3_3:17093825-17093844 | Msa0444190:intron | 20.0% |
| !! | AAATTTGTATGGTTTAGTTA+AGG | - | chr3_3:17093928-17093947 | None:intergenic | 20.0% |
| !! | GATAAACATCATAAAGAAAA+AGG | - | chr3_3:17093990-17094009 | None:intergenic | 20.0% |
| !! | TAGAACTATTTAGTTGTTAA+AGG | + | chr3_3:17094428-17094447 | Msa0444190:three_prime_UTR | 20.0% |
| !! | GAGATTTTCATTGCAATTTA+AGG | - | chr3_3:17087424-17087443 | None:intergenic | 25.0% |
| ! | AATTGCAATGAAAATCTCAT+CGG | + | chr3_3:17087426-17087445 | Msa0444190:exon | 25.0% |
| ! | TAGTTTCTTATTACTCTCTT+TGG | + | chr3_3:17087613-17087632 | Msa0444190:intron | 25.0% |
| !! | AAGAACTCTCTAAAAAAATG+TGG | - | chr3_3:17088210-17088229 | None:intergenic | 25.0% |
| ! | GATTACAATTAGAACTAGAA+TGG | + | chr3_3:17088535-17088554 | Msa0444190:intron | 25.0% |
| !!! | TTGTTGATTTAGTAGACAAA+TGG | + | chr3_3:17088599-17088618 | Msa0444190:intron | 25.0% |
| ! | ATGATTTATTCATGATGAAG+AGG | + | chr3_3:17088685-17088704 | Msa0444190:intron | 25.0% |
| ! | TTCAATTATTTGAACAGAGT+TGG | + | chr3_3:17088983-17089002 | Msa0444190:intron | 25.0% |
| ! | TGATTTGATAAATGTGTGTA+GGG | + | chr3_3:17089024-17089043 | Msa0444190:intron | 25.0% |
| ! | AGTTCTGTTCAAACTTAAAT+TGG | + | chr3_3:17089392-17089411 | Msa0444190:intron | 25.0% |
| ! | GAAATATACTCATTTACATG+TGG | + | chr3_3:17089414-17089433 | Msa0444190:intron | 25.0% |
| !! | TGTTTTATGTATATGGTTTC+AGG | + | chr3_3:17089520-17089539 | Msa0444190:intron | 25.0% |
| !! | TTTTCTTAAGGAGAAATTGA+AGG | + | chr3_3:17089691-17089710 | Msa0444190:CDS | 25.0% |
| !! | TATTACCTAACTGTTTCTTT+AGG | + | chr3_3:17089745-17089764 | Msa0444190:intron | 25.0% |
| !!! | GTTTGCTTTGTTTGAATTTA+TGG | + | chr3_3:17089857-17089876 | Msa0444190:intron | 25.0% |
| ! | TATGTGATTTCTTCCAATAT+TGG | + | chr3_3:17089887-17089906 | Msa0444190:intron | 25.0% |
| !! | TTCTTTTATTGTATGGAGAA+TGG | + | chr3_3:17089974-17089993 | Msa0444190:intron | 25.0% |
| ! | AAAATGTATCCAAGTGAATT+TGG | - | chr3_3:17090089-17090108 | None:intergenic | 25.0% |
| ! | GCAAAAAGACTAAAATATGA+CGG | - | chr3_3:17090229-17090248 | None:intergenic | 25.0% |
| ! | GTAATATTATGTATAGCAAC+AGG | + | chr3_3:17090288-17090307 | Msa0444190:intron | 25.0% |
| ! | TAAAACTTCGAGATTGAAAA+CGG | - | chr3_3:17090330-17090349 | None:intergenic | 25.0% |
| !!! | AGTTGGTTATTAGTTTGTTT+TGG | + | chr3_3:17090532-17090551 | Msa0444190:intron | 25.0% |
| !!! | ATTCCAATTTTTGAAAACAC+TGG | + | chr3_3:17090756-17090775 | Msa0444190:intron | 25.0% |
| ! | TATAATGTTGTTAAGGACAA+AGG | - | chr3_3:17091076-17091095 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTATCTTGAACTA+TGG | - | chr3_3:17091117-17091136 | None:intergenic | 25.0% |
| !! | ATTCATAGAAAGCTCATTTT+GGG | - | chr3_3:17091162-17091181 | None:intergenic | 25.0% |
| ! | GCAAAATTATTTCAATCAAC+AGG | + | chr3_3:17091461-17091480 | Msa0444190:intron | 25.0% |
| ! | AAATTATTTCAATCAACAGG+AGG | + | chr3_3:17091464-17091483 | Msa0444190:intron | 25.0% |
| !! | GTATGATTTGATTTCATTGT+TGG | + | chr3_3:17091708-17091727 | Msa0444190:intron | 25.0% |
| ! | TAACATTCAAATCTCTATAG+CGG | + | chr3_3:17091924-17091943 | Msa0444190:intron | 25.0% |
| !! | ATGCGAAAATGTTGTTTATA+AGG | + | chr3_3:17092031-17092050 | Msa0444190:intron | 25.0% |
| ! | TATTTAAGTGCACTTGTATA+TGG | + | chr3_3:17092155-17092174 | Msa0444190:intron | 25.0% |
| ! | ATTTAAGTGCACTTGTATAT+GGG | + | chr3_3:17092156-17092175 | Msa0444190:intron | 25.0% |
| ! | CATATTCAAATCATCAAATG+AGG | - | chr3_3:17092313-17092332 | None:intergenic | 25.0% |
| !! | CATTTGATGATTTGAATATG+TGG | + | chr3_3:17092313-17092332 | Msa0444190:intron | 25.0% |
| !! | TTTGAAACATTTAGGTAGAA+TGG | + | chr3_3:17092448-17092467 | Msa0444190:intron | 25.0% |
| ! | TTGAAACATTTAGGTAGAAT+GGG | + | chr3_3:17092449-17092468 | Msa0444190:intron | 25.0% |
| ! | AAAAAAGGATACTGAAACTT+CGG | - | chr3_3:17092540-17092559 | None:intergenic | 25.0% |
| !! | GAACTAGTTTCATTAATTCA+TGG | - | chr3_3:17092639-17092658 | None:intergenic | 25.0% |
| ! | AGATGATAATCACTATAACT+TGG | - | chr3_3:17092709-17092728 | None:intergenic | 25.0% |
| !!! | ATCAATGATTTTAAGAAGAC+GGG | + | chr3_3:17092821-17092840 | Msa0444190:intron | 25.0% |
| !! | TTTTCCAATCACAGTTAATT+TGG | + | chr3_3:17093052-17093071 | Msa0444190:intron | 25.0% |
| ! | AATTCCAAATTAACTGTGAT+TGG | - | chr3_3:17093059-17093078 | None:intergenic | 25.0% |
| !!! | ACCCTAAATATTTTAGAAAG+AGG | - | chr3_3:17093398-17093417 | None:intergenic | 25.0% |
| ! | ATGATGTTTATCGTATTAGA+TGG | + | chr3_3:17093998-17094017 | Msa0444190:intron | 25.0% |
| ! | AAAATGACAAATATTTGTGC+TGG | + | chr3_3:17094121-17094140 | Msa0444190:intron | 25.0% |
| ! | AATATGTTATGTTCAGTTTC+TGG | - | chr3_3:17094381-17094400 | None:intergenic | 25.0% |
| ! | AACTGAACATAACATATTCT+AGG | + | chr3_3:17094383-17094402 | Msa0444190:exon | 25.0% |
| !!! | CATAACATATTCTAGGATTT+AGG | + | chr3_3:17094390-17094409 | Msa0444190:three_prime_UTR | 25.0% |
| ! | GCTGATTCTTTCTTTGAATT+TGG | + | chr3_3:17087666-17087685 | Msa0444190:intron | 30.0% |
| GATTGTTATAGTTTCTTCGA+TGG | + | chr3_3:17087794-17087813 | Msa0444190:intron | 30.0% | |
| ! | TGTTTATGTTAGCTGGATTT+TGG | + | chr3_3:17088010-17088029 | Msa0444190:intron | 30.0% |
| CTTTGTCAAAAATCTCCAAA+TGG | - | chr3_3:17088110-17088129 | None:intergenic | 30.0% | |
| TACAAAATCCCCCAAAAATA+GGG | - | chr3_3:17088357-17088376 | None:intergenic | 30.0% | |
| ATACAAAATCCCCCAAAAAT+AGG | - | chr3_3:17088358-17088377 | None:intergenic | 30.0% | |
| CATGATGAAGAGGTAAATAA+TGG | + | chr3_3:17088695-17088714 | Msa0444190:intron | 30.0% | |
| ! | GTGAATATTTGTCGTTGATT+AGG | + | chr3_3:17088816-17088835 | Msa0444190:intron | 30.0% |
| GTGATTTGATAAATGTGTGT+AGG | + | chr3_3:17089023-17089042 | Msa0444190:intron | 30.0% | |
| !!! | CTGCTTCTTGAGAATTTTTT+TGG | + | chr3_3:17089437-17089456 | Msa0444190:intron | 30.0% |
| TCAATCCTAAAGAAACAGTT+AGG | - | chr3_3:17089753-17089772 | None:intergenic | 30.0% | |
| AATTGAACTTAAGCAAACAG+AGG | - | chr3_3:17089803-17089822 | None:intergenic | 30.0% | |
| GAGGTTATGAATTAAACTTG+TGG | - | chr3_3:17089836-17089855 | None:intergenic | 30.0% | |
| AATTCAAACAAAGCAAACAG+AGG | - | chr3_3:17089855-17089874 | None:intergenic | 30.0% | |
| TTTGAAAACACATTCCATGT+TGG | + | chr3_3:17089928-17089947 | Msa0444190:intron | 30.0% | |
| CTTCCAAATCAAATATGTCA+TGG | - | chr3_3:17090156-17090175 | None:intergenic | 30.0% | |
| ! | TTTTACTTTGTGTTAGCAAC+AGG | + | chr3_3:17090345-17090364 | Msa0444190:intron | 30.0% |
| AAACATACACATCCCTAATT+GGG | - | chr3_3:17090373-17090392 | None:intergenic | 30.0% | |
| !!! | TGGTTATTAGTTTGTTTTGG+AGG | + | chr3_3:17090535-17090554 | Msa0444190:intron | 30.0% |
| CTCTATAACTCTAAACCAAA+GGG | - | chr3_3:17090569-17090588 | None:intergenic | 30.0% | |
| ! | CTTTGGTTTAGAGTTATAGA+GGG | + | chr3_3:17090568-17090587 | Msa0444190:intron | 30.0% |
| TAGAACTTGACCATAAACTA+GGG | - | chr3_3:17090631-17090650 | None:intergenic | 30.0% | |
| ATAGAACTTGACCATAAACT+AGG | - | chr3_3:17090632-17090651 | None:intergenic | 30.0% | |
| ATGGTCAAGTTCTATCAAAA+TGG | + | chr3_3:17090637-17090656 | Msa0444190:intron | 30.0% | |
| TGGTCAAGTTCTATCAAAAT+GGG | + | chr3_3:17090638-17090657 | Msa0444190:intron | 30.0% | |
| ! | AGACCAGTGTTTTCAAAAAT+TGG | - | chr3_3:17090762-17090781 | None:intergenic | 30.0% |
| ! | TTCATAGAAAGCTCATTTTG+GGG | - | chr3_3:17091161-17091180 | None:intergenic | 30.0% |
| ! | GATTCATAGAAAGCTCATTT+TGG | - | chr3_3:17091163-17091182 | None:intergenic | 30.0% |
| ! | CTTTTATTCTTTAGTGTGGA+CGG | + | chr3_3:17091189-17091208 | Msa0444190:intron | 30.0% |
| ! | GTTTCAATTGATTTCACATC+AGG | + | chr3_3:17091285-17091304 | Msa0444190:CDS | 30.0% |
| !!! | TCTGTGTCCTGTTTATTTTT+TGG | + | chr3_3:17091405-17091424 | Msa0444190:intron | 30.0% |
| ! | ACAATTAACAATTTTCGGCT+TGG | + | chr3_3:17091600-17091619 | Msa0444190:CDS | 30.0% |
| ! | AACAACATTTTCGCATATGT+TGG | - | chr3_3:17091770-17091789 | None:intergenic | 30.0% |
| ATGAAGGAAATAGCAAAACA+TGG | - | chr3_3:17092253-17092272 | None:intergenic | 30.0% | |
| CTCAAGATTAATAACAACAG+AGG | - | chr3_3:17092368-17092387 | None:intergenic | 30.0% | |
| TGACAGCACTTAATAAACTT+TGG | - | chr3_3:17092942-17092961 | None:intergenic | 30.0% | |
| CTAGATAGTATATAATGTGG+TGG | + | chr3_3:17093017-17093036 | Msa0444190:intron | 30.0% | |
| !!! | CTTGTTGCTTTTAGAATTGT+TGG | + | chr3_3:17093611-17093630 | Msa0444190:intron | 30.0% |
| AAAACCGTAGCCATTAATAA+TGG | - | chr3_3:17093654-17093673 | None:intergenic | 30.0% | |
| TATGGTTTAGTTAAGGAAAG+AGG | - | chr3_3:17093921-17093940 | None:intergenic | 30.0% | |
| GATAAATGATTCTCAAAGCA+TGG | - | chr3_3:17094049-17094068 | None:intergenic | 30.0% | |
| !! | AAATATTTGTGCTGGTTTGT+AGG | + | chr3_3:17094129-17094148 | Msa0444190:intron | 30.0% |
| TTCCTGCTTATTAAAGCTTT+GGG | - | chr3_3:17094189-17094208 | None:intergenic | 30.0% | |
| TTTCCTGCTTATTAAAGCTT+TGG | - | chr3_3:17094190-17094209 | None:intergenic | 30.0% | |
| GCTTTAATAAGCAGGAAAAT+TGG | + | chr3_3:17094192-17094211 | Msa0444190:CDS | 30.0% | |
| TCAAAACTAACGAATACAAG+AGG | - | chr3_3:17094519-17094538 | None:intergenic | 30.0% | |
| !! | AGGATCGTTGAAGTACTTTT+CGG | - | chr3_3:17087581-17087600 | None:intergenic | 35.0% |
| TCACTTGTGTTTATGTTAGC+TGG | + | chr3_3:17088003-17088022 | Msa0444190:intron | 35.0% | |
| ! | AGCTGGATTTTGGATTAAGA+CGG | + | chr3_3:17088020-17088039 | Msa0444190:intron | 35.0% |
| ! | ATTAAGACGGCACTTTTAAC+TGG | + | chr3_3:17088033-17088052 | Msa0444190:intron | 35.0% |
| TGGAGGATTACGAAAAATAG+AGG | + | chr3_3:17088053-17088072 | Msa0444190:intron | 35.0% | |
| ACAAAGAAAATAGAGGCAGT+CGG | + | chr3_3:17088124-17088143 | Msa0444190:intron | 35.0% | |
| TGTAATTAAGGCTCTGTTTG+CGG | + | chr3_3:17088147-17088166 | Msa0444190:intron | 35.0% | |
| ! | TTTTTGCGTTCCCCTATTTT+TGG | + | chr3_3:17088343-17088362 | Msa0444190:intron | 35.0% |
| !! | TTTTGCGTTCCCCTATTTTT+GGG | + | chr3_3:17088344-17088363 | Msa0444190:intron | 35.0% |
| ACAAAATCCCCCAAAAATAG+GGG | - | chr3_3:17088356-17088375 | None:intergenic | 35.0% | |
| ! | TGGGGGATTTTGTATTATGA+AGG | + | chr3_3:17088363-17088382 | Msa0444190:intron | 35.0% |
| GACAAATATTCACACAGAAC+CGG | - | chr3_3:17088809-17088828 | None:intergenic | 35.0% | |
| GTTGGTGTGATGATATAGAA+TGG | + | chr3_3:17089001-17089020 | Msa0444190:intron | 35.0% | |
| TGTGATGAGCACAACTAAAA+TGG | + | chr3_3:17089079-17089098 | Msa0444190:CDS | 35.0% | |
| !! | TTTTGTGGTAGTGTACAAGT+CGG | + | chr3_3:17089205-17089224 | Msa0444190:CDS | 35.0% |
| GAATTGAATCCAGAGTTATG+AGG | - | chr3_3:17089299-17089318 | None:intergenic | 35.0% | |
| GTCTGATAAGCTTGATAAAG+AGG | + | chr3_3:17089580-17089599 | Msa0444190:CDS | 35.0% | |
| GAGGTTATGAATACGACTAA+TGG | - | chr3_3:17089784-17089803 | None:intergenic | 35.0% | |
| !! | GCTTTGTTTGAATTTATGGC+CGG | + | chr3_3:17089861-17089880 | Msa0444190:intron | 35.0% |
| TGGAAGAAATCACATACTAC+CGG | - | chr3_3:17089883-17089902 | None:intergenic | 35.0% | |
| GAATTGAAATGCTTCCAACA+TGG | - | chr3_3:17089945-17089964 | None:intergenic | 35.0% | |
| AATATGTCATGGCTCTTGAA+TGG | - | chr3_3:17090145-17090164 | None:intergenic | 35.0% | |
| GAGCCATGACATATTTGATT+TGG | + | chr3_3:17090150-17090169 | Msa0444190:intron | 35.0% | |
| ! | CCTACATAGGAATCATCTTT+TGG | - | chr3_3:17090258-17090277 | None:intergenic | 35.0% |
| CCAAAAGATGATTCCTATGT+AGG | + | chr3_3:17090255-17090274 | Msa0444190:intron | 35.0% | |
| TGAAAACGGTAGCATCAATT+GGG | - | chr3_3:17090316-17090335 | None:intergenic | 35.0% | |
| TTGAAAACGGTAGCATCAAT+TGG | - | chr3_3:17090317-17090336 | None:intergenic | 35.0% | |
| CAAACATACACATCCCTAAT+TGG | - | chr3_3:17090374-17090393 | None:intergenic | 35.0% | |
| CTGACGTTGGATATAAATAG+AGG | + | chr3_3:17090485-17090504 | Msa0444190:intron | 35.0% | |
| TGTAAACGCATTCAGTTAGT+TGG | + | chr3_3:17090515-17090534 | Msa0444190:intron | 35.0% | |
| CCTCTATAACTCTAAACCAA+AGG | - | chr3_3:17090570-17090589 | None:intergenic | 35.0% | |
| ! | CCTTTGGTTTAGAGTTATAG+AGG | + | chr3_3:17090567-17090586 | Msa0444190:intron | 35.0% |
| GAGTAACAGAAAGAGAACAT+GGG | - | chr3_3:17090609-17090628 | None:intergenic | 35.0% | |
| TTCTGTTACTCCCTAGTTTA+TGG | + | chr3_3:17090618-17090637 | Msa0444190:intron | 35.0% | |
| TCATTGTTTGTGTGGTGATT+TGG | + | chr3_3:17090694-17090713 | Msa0444190:intron | 35.0% | |
| GGCTTTCAAAGAAAACATAG+TGG | - | chr3_3:17090810-17090829 | None:intergenic | 35.0% | |
| GGCTTTCAAAGAAAACATAG+TGG | - | chr3_3:17090810-17090829 | None:intergenic | 35.0% | |
| AGAAGAAAGAAGACTAGAAG+CGG | + | chr3_3:17090940-17090959 | Msa0444190:CDS | 35.0% | |
| TGAAGTAAATGCTGAACTGA+AGG | + | chr3_3:17090991-17091010 | Msa0444190:CDS | 35.0% | |
| ! | TCATAGAAAGCTCATTTTGG+GGG | - | chr3_3:17091160-17091179 | None:intergenic | 35.0% |
| TGCTTGTGAAACTTCAATCT+TGG | - | chr3_3:17091508-17091527 | None:intergenic | 35.0% | |
| !! | GCTTTTCCTATTTCTCATGA+TGG | + | chr3_3:17091567-17091586 | Msa0444190:CDS | 35.0% |
| AACTCTCCATCATGAGAAAT+AGG | - | chr3_3:17091576-17091595 | None:intergenic | 35.0% | |
| ! | ATTTCTCATGATGGAGAGTT+TGG | + | chr3_3:17091576-17091595 | Msa0444190:CDS | 35.0% |
| ! | ACGCATCTTACTGGAATTTT+GGG | - | chr3_3:17091633-17091652 | None:intergenic | 35.0% |
| ! | TACGCATCTTACTGGAATTT+TGG | - | chr3_3:17091634-17091653 | None:intergenic | 35.0% |
| ! | ACATTTTCGCATATGTTGGT+AGG | - | chr3_3:17091766-17091785 | None:intergenic | 35.0% |
| AACTGACAGTAAGCAAGAAT+AGG | - | chr3_3:17092101-17092120 | None:intergenic | 35.0% | |
| TGATGATATGTTCAACTTCG+TGG | + | chr3_3:17092219-17092238 | Msa0444190:intron | 35.0% | |
| TCAAATCATCAAATGAGGGA+AGG | - | chr3_3:17092308-17092327 | None:intergenic | 35.0% | |
| AACAGAGGAGAAAATTCTTC+AGG | - | chr3_3:17092353-17092372 | None:intergenic | 35.0% | |
| ! | CAGAATTTTACATCTGACAG+TGG | + | chr3_3:17092663-17092682 | Msa0444190:intron | 35.0% |
| GTCTACCATGCCATTATTAA+TGG | + | chr3_3:17093641-17093660 | Msa0444190:intron | 35.0% | |
| CATGCCATTATTAATGGCTA+CGG | + | chr3_3:17093647-17093666 | Msa0444190:intron | 35.0% | |
| !!! | ATTGTTTTTAGCATGCCTCA+AGG | + | chr3_3:17093729-17093748 | Msa0444190:CDS | 35.0% |
| TATGTTGTTCTCTTGATCCT+TGG | - | chr3_3:17093776-17093795 | None:intergenic | 35.0% | |
| AACTTGAAACATTTCTCTGG+TGG | - | chr3_3:17093799-17093818 | None:intergenic | 35.0% | |
| GGTAACTTGAAACATTTCTC+TGG | - | chr3_3:17093802-17093821 | None:intergenic | 35.0% | |
| TCTTTCAACTCATGAGAAAG+AGG | - | chr3_3:17093965-17093984 | None:intergenic | 35.0% | |
| !! | CTTATTAAAGCTTTGGGTGA+TGG | - | chr3_3:17094183-17094202 | None:intergenic | 35.0% |
| ACACACTCTGCAATTTGAAA+TGG | + | chr3_3:17094231-17094250 | Msa0444190:CDS | 35.0% | |
| ! | CACACTCTGCAATTTGAAAT+GGG | + | chr3_3:17094232-17094251 | Msa0444190:CDS | 35.0% |
| ! | ATTTGAAATGGGCACTCTAT+TGG | + | chr3_3:17094243-17094262 | Msa0444190:CDS | 35.0% |
| ! | TCAGTTTCTGGATTCAGATT+TGG | - | chr3_3:17094369-17094388 | None:intergenic | 35.0% |
| ATGAGAGAGACGACGAAAAA+GGG | + | chr3_3:17087460-17087479 | Msa0444190:CDS | 40.0% | |
| AGAAACTAACCAGAACGAGA+AGG | - | chr3_3:17087601-17087620 | None:intergenic | 40.0% | |
| AAAGAATCAGCGAATTGCAG+AGG | - | chr3_3:17087657-17087676 | None:intergenic | 40.0% | |
| ATGTGAAAGGATCGTCCATT+TGG | + | chr3_3:17088092-17088111 | Msa0444190:intron | 40.0% | |
| GTAATTAAGGCTCTGTTTGC+GGG | + | chr3_3:17088148-17088167 | Msa0444190:intron | 40.0% | |
| !!! | TTTGCGTTCCCCTATTTTTG+GGG | + | chr3_3:17088345-17088364 | Msa0444190:intron | 40.0% |
| ACAAACCCCCTTATTCAAGT+TGG | + | chr3_3:17088389-17088408 | Msa0444190:intron | 40.0% | |
| ! | CAAACCCCCTTATTCAAGTT+GGG | + | chr3_3:17088390-17088409 | Msa0444190:intron | 40.0% |
| !! | AAACCCCCTTATTCAAGTTG+GGG | + | chr3_3:17088391-17088410 | Msa0444190:intron | 40.0% |
| AGGAAAGGGAAATGGAAGAT+AGG | - | chr3_3:17088423-17088442 | None:intergenic | 40.0% | |
| AGGTAAAAGGAAGGAGGAAA+GGG | - | chr3_3:17088437-17088456 | None:intergenic | 40.0% | |
| TAGGTAAAAGGAAGGAGGAA+AGG | - | chr3_3:17088438-17088457 | None:intergenic | 40.0% | |
| GACTTTAGGTAAAAGGAAGG+AGG | - | chr3_3:17088443-17088462 | None:intergenic | 40.0% | |
| GAGGACTTTAGGTAAAAGGA+AGG | - | chr3_3:17088446-17088465 | None:intergenic | 40.0% | |
| ! | TTGATGATCCTTGCACACTT+AGG | - | chr3_3:17088491-17088510 | None:intergenic | 40.0% |
| GTGCAAGGATCATCAATTCA+TGG | + | chr3_3:17088495-17088514 | Msa0444190:intron | 40.0% | |
| GCTTCAATTGTACAGTTCAC+CGG | + | chr3_3:17088787-17088806 | Msa0444190:intron | 40.0% | |
| TAAATGTGTGTAGGGATGCA+AGG | + | chr3_3:17089032-17089051 | Msa0444190:intron | 40.0% | |
| ATGCAAGGTTCATCCATTCA+TGG | + | chr3_3:17089047-17089066 | Msa0444190:CDS | 40.0% | |
| TTCCATTGTCTTTCCAGGAT+GGG | - | chr3_3:17089180-17089199 | None:intergenic | 40.0% | |
| ! | GACAATGGAAGAGTCTTTTG+TGG | + | chr3_3:17089190-17089209 | Msa0444190:CDS | 40.0% |
| TTGAATCCAGAGTTATGAGG+TGG | - | chr3_3:17089296-17089315 | None:intergenic | 40.0% | |
| CAATCTCAAATGCTCGAGTT+AGG | - | chr3_3:17089334-17089353 | None:intergenic | 40.0% | |
| !! | AGAAATTGAAGGTGCTCATC+AGG | + | chr3_3:17089702-17089721 | Msa0444190:intron | 40.0% |
| CATACCAGACCAAATTCACT+TGG | + | chr3_3:17090077-17090096 | Msa0444190:intron | 40.0% | |
| GTATCCAAGTGAATTTGGTC+TGG | - | chr3_3:17090084-17090103 | None:intergenic | 40.0% | |
| GTTAGTTAGCCCTCTAACTT+TGG | + | chr3_3:17090459-17090478 | Msa0444190:intron | 40.0% | |
| GGAGTAACAGAAAGAGAACA+TGG | - | chr3_3:17090610-17090629 | None:intergenic | 40.0% | |
| TATGGCTGTCATTGTTTGTG+TGG | + | chr3_3:17090686-17090705 | Msa0444190:intron | 40.0% | |
| ATCTAGCCGCTTCAAAGAAT+TGG | + | chr3_3:17091027-17091046 | Msa0444190:CDS | 40.0% | |
| TACATGTCTGAATGTGTAGC+AGG | + | chr3_3:17091236-17091255 | Msa0444190:intron | 40.0% | |
| TCTGAATGTGTAGCAGGTAT+TGG | + | chr3_3:17091242-17091261 | Msa0444190:intron | 40.0% | |
| ! | CGCATCTTACTGGAATTTTG+GGG | - | chr3_3:17091632-17091651 | None:intergenic | 40.0% |
| !!! | ATGCGTAGCATGTTGTTTTC+TGG | + | chr3_3:17091647-17091666 | Msa0444190:intron | 40.0% |
| GGATGAGATAAATGCTGCAT+GGG | + | chr3_3:17092470-17092489 | Msa0444190:CDS | 40.0% | |
| GATGAGATAAATGCTGCATG+GGG | + | chr3_3:17092471-17092490 | Msa0444190:CDS | 40.0% | |
| AAGGATACTGAAACTTCGGT+CGG | - | chr3_3:17092536-17092555 | None:intergenic | 40.0% | |
| CCTATGAACCATGAAGACAA+TGG | - | chr3_3:17092847-17092866 | None:intergenic | 40.0% | |
| CCATTGTCTTCATGGTTCAT+AGG | + | chr3_3:17092844-17092863 | Msa0444190:intron | 40.0% | |
| TTATGCCTGTGGTGATATTG+TGG | + | chr3_3:17093444-17093463 | Msa0444190:intron | 40.0% | |
| CGTAGCCATTAATAATGGCA+TGG | - | chr3_3:17093649-17093668 | None:intergenic | 40.0% | |
| ! | ATTAATGGCTACGGTTTTGC+AGG | + | chr3_3:17093656-17093675 | Msa0444190:intron | 40.0% |
| !! | TTGGTCCAGTCAACTTGTTT+TGG | + | chr3_3:17093680-17093699 | Msa0444190:CDS | 40.0% |
| CAAATTCTGCGAAATCCTTG+AGG | - | chr3_3:17093747-17093766 | None:intergenic | 40.0% | |
| ! | CACCCAAAGCTTTAATAAGC+AGG | + | chr3_3:17094184-17094203 | Msa0444190:CDS | 40.0% |
| GAAGATACCATTGCTGAAAG+AGG | - | chr3_3:17094293-17094312 | None:intergenic | 40.0% | |
| AAATCTCATCGGTGCAAGAG+AGG | + | chr3_3:17087437-17087456 | Msa0444190:CDS | 45.0% | |
| GATGAGAGAGACGACGAAAA+AGG | + | chr3_3:17087459-17087478 | Msa0444190:CDS | 45.0% | |
| ! | AGTTCTGACAAACCCATCGA+GGG | - | chr3_3:17087519-17087538 | None:intergenic | 45.0% |
| !! | CAACGATGCAAAGTGGATTG+CGG | - | chr3_3:17087543-17087562 | None:intergenic | 45.0% |
| TTCAACGATCCTTCTCGTTC+TGG | + | chr3_3:17087589-17087608 | Msa0444190:CDS | 45.0% | |
| !! | AAGACGGCACTTTTAACTGG+AGG | + | chr3_3:17088036-17088055 | Msa0444190:intron | 45.0% |
| AGAGGCAGTCGGTGTAATTA+AGG | + | chr3_3:17088135-17088154 | Msa0444190:intron | 45.0% | |
| !!! | TTGCGTTCCCCTATTTTTGG+GGG | + | chr3_3:17088346-17088365 | Msa0444190:intron | 45.0% |
| !! | AACCCCCTTATTCAAGTTGG+GGG | + | chr3_3:17088392-17088411 | Msa0444190:intron | 45.0% |
| TAGCCCCCCAACTTGAATAA+GGG | - | chr3_3:17088399-17088418 | None:intergenic | 45.0% | |
| ATAGCCCCCCAACTTGAATA+AGG | - | chr3_3:17088400-17088419 | None:intergenic | 45.0% | |
| AAGGAAGGAGGAAAGGGAAA+TGG | - | chr3_3:17088431-17088450 | None:intergenic | 45.0% | |
| AGGGGAGGACTTTAGGTAAA+AGG | - | chr3_3:17088450-17088469 | None:intergenic | 45.0% | |
| TTAGGCTCTGTTTGCGAGTT+CGG | - | chr3_3:17088473-17088492 | None:intergenic | 45.0% | |
| AAACAGAGCCTAAGTGTGCA+AGG | + | chr3_3:17088480-17088499 | Msa0444190:intron | 45.0% | |
| ATCCCATCCTGGAAAGACAA+TGG | + | chr3_3:17089175-17089194 | Msa0444190:CDS | 45.0% | |
| CTTCCATTGTCTTTCCAGGA+TGG | - | chr3_3:17089181-17089200 | None:intergenic | 45.0% | |
| GACTCTTCCATTGTCTTTCC+AGG | - | chr3_3:17089185-17089204 | None:intergenic | 45.0% | |
| CATTTGCCACCTCATAACTC+TGG | + | chr3_3:17089287-17089306 | Msa0444190:CDS | 45.0% | |
| ACAAAACTCGCATGCAGTCA+AGG | - | chr3_3:17089562-17089581 | None:intergenic | 45.0% | |
| TGAAGCCTGTCTTAAACGCT+TGG | + | chr3_3:17089634-17089653 | Msa0444190:CDS | 45.0% | |
| TAAGAAAATCAGCCTCGCTG+AGG | - | chr3_3:17089679-17089698 | None:intergenic | 45.0% | |
| !! | CAGCGAGGCTGATTTTCTTA+AGG | + | chr3_3:17089679-17089698 | Msa0444190:CDS | 45.0% |
| TTGGAAGTTGCACTCTCTCA+TGG | + | chr3_3:17090169-17090188 | Msa0444190:intron | 45.0% | |
| AACAGAGCTAACACAGCTCT+GGG | - | chr3_3:17090413-17090432 | None:intergenic | 45.0% | |
| !! | CTGTGTTAGCTCTGTTGGTT+AGG | + | chr3_3:17090417-17090436 | Msa0444190:intron | 45.0% |
| CGTCAGCTACCAAAGTTAGA+GGG | - | chr3_3:17090471-17090490 | None:intergenic | 45.0% | |
| ACGTCAGCTACCAAAGTTAG+AGG | - | chr3_3:17090472-17090491 | None:intergenic | 45.0% | |
| ! | CTAACTTTGGTAGCTGACGT+TGG | + | chr3_3:17090472-17090491 | Msa0444190:intron | 45.0% |
| TAGCCGCTTCAAAGAATTGG+AGG | + | chr3_3:17091030-17091049 | Msa0444190:CDS | 45.0% | |
| ! | GCTCCTCCAATTCTTTGAAG+CGG | - | chr3_3:17091036-17091055 | None:intergenic | 45.0% |
| GCTTCAAAGAATTGGAGGAG+CGG | + | chr3_3:17091035-17091054 | Msa0444190:CDS | 45.0% | |
| !! | AAGCTCATTTTGGGGGTTGA+GGG | - | chr3_3:17091153-17091172 | None:intergenic | 45.0% |
| !! | AAAGCTCATTTTGGGGGTTG+AGG | - | chr3_3:17091154-17091173 | None:intergenic | 45.0% |
| ! | GGAGGAGAGAGATGCAATTT+TGG | + | chr3_3:17091482-17091501 | Msa0444190:intron | 45.0% |
| CAACATGCTACGCATCTTAC+TGG | - | chr3_3:17091642-17091661 | None:intergenic | 45.0% | |
| GCTATCATAGTAGTCAACCC+TGG | + | chr3_3:17091805-17091824 | Msa0444190:intron | 45.0% | |
| AACCCTGGATAGCGTATAGT+GGG | + | chr3_3:17091820-17091839 | Msa0444190:intron | 45.0% | |
| ATCCCACTATACGCTATCCA+GGG | - | chr3_3:17091825-17091844 | None:intergenic | 45.0% | |
| TAGTCAATAGCGCGCTATAG+CGG | - | chr3_3:17091992-17092011 | None:intergenic | 45.0% | |
| GGGATGAGATAAATGCTGCA+TGG | + | chr3_3:17092469-17092488 | Msa0444190:CDS | 45.0% | |
| TATGCAGAAGAAGGCAAGCT+TGG | - | chr3_3:17092497-17092516 | None:intergenic | 45.0% | |
| GGCACATTGTATGCAGAAGA+AGG | - | chr3_3:17092506-17092525 | None:intergenic | 45.0% | |
| GAAACTTCGGTCGGAAATAC+TGG | - | chr3_3:17092527-17092546 | None:intergenic | 45.0% | |
| ATCTGACAGTGGTCATGCTA+GGG | + | chr3_3:17092674-17092693 | Msa0444190:intron | 45.0% | |
| ! | CAGCTCATAAGTACTGTTGC+TGG | - | chr3_3:17093269-17093288 | None:intergenic | 45.0% |
| ! | GTGCTCCAAAACAAGTTGAC+TGG | - | chr3_3:17093688-17093707 | None:intergenic | 45.0% |
| GTTCTCTTGATCCTTGGACT+TGG | - | chr3_3:17093770-17093789 | None:intergenic | 45.0% | |
| !! | TGGGCACTCTATTGGTTTGT+TGG | + | chr3_3:17094251-17094270 | Msa0444190:CDS | 45.0% |
| ATACCATTGCTGAAAGAGGC+TGG | - | chr3_3:17094289-17094308 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAAACTT+TGG | - | chr3_3:17092909-17092928 | None:intergenic | 5.0% |
| GAGAGACGACGAAAAAGGGT+CGG | + | chr3_3:17087464-17087483 | Msa0444190:CDS | 50.0% | |
| ! | CAGTTCTGACAAACCCATCG+AGG | - | chr3_3:17087520-17087539 | None:intergenic | 50.0% |
| CGCAATCCACTTTGCATCGT+TGG | + | chr3_3:17087541-17087560 | Msa0444190:CDS | 50.0% | |
| TAAGGCTCTGTTTGCGGGTT+TGG | + | chr3_3:17088153-17088172 | Msa0444190:intron | 50.0% | |
| !! | ACCCCCTTATTCAAGTTGGG+GGG | + | chr3_3:17088393-17088412 | Msa0444190:intron | 50.0% |
| AGCCCCCCAACTTGAATAAG+GGG | - | chr3_3:17088398-17088417 | None:intergenic | 50.0% | |
| CAACGGCGCACCAACAAAAA+AGG | - | chr3_3:17088867-17088886 | None:intergenic | 50.0% | |
| CACACTGCTAGCACCATGAA+TGG | - | chr3_3:17089063-17089082 | None:intergenic | 50.0% | |
| GTTGCCAAAGCAAAGACCTC+AGG | + | chr3_3:17089118-17089137 | Msa0444190:CDS | 50.0% | |
| TGAGCCTGAGGTCTTTGCTT+TGG | - | chr3_3:17089125-17089144 | None:intergenic | 50.0% | |
| AAGCAAAGACCTCAGGCTCA+AGG | + | chr3_3:17089125-17089144 | Msa0444190:CDS | 50.0% | |
| AAGTCGGAATCTGCGTCTGA+TGG | + | chr3_3:17089221-17089240 | Msa0444190:CDS | 50.0% | |
| AATCTGCGTCTGATGGAGGT+GGG | + | chr3_3:17089228-17089247 | Msa0444190:CDS | 50.0% | |
| GATTGCCACAACACAGACAC+AGG | + | chr3_3:17089349-17089368 | Msa0444190:CDS | 50.0% | |
| CGCATGCAGTCAAGGCATAA+AGG | - | chr3_3:17089554-17089573 | None:intergenic | 50.0% | |
| AGCCTGTCTTAAACGCTTGG+AGG | + | chr3_3:17089637-17089656 | Msa0444190:CDS | 50.0% | |
| GCCTGTCTTAAACGCTTGGA+GGG | + | chr3_3:17089638-17089657 | Msa0444190:CDS | 50.0% | |
| CCTGTCTTAAACGCTTGGAG+GGG | + | chr3_3:17089639-17089658 | Msa0444190:CDS | 50.0% | |
| CTGTCTTAAACGCTTGGAGG+GGG | + | chr3_3:17089640-17089659 | Msa0444190:CDS | 50.0% | |
| TTAGCAACAGGCGCCCAATT+AGG | + | chr3_3:17090357-17090376 | Msa0444190:intron | 50.0% | |
| TAGCAACAGGCGCCCAATTA+GGG | + | chr3_3:17090358-17090377 | Msa0444190:intron | 50.0% | |
| CAACAGAGCTAACACAGCTC+TGG | - | chr3_3:17090414-17090433 | None:intergenic | 50.0% | |
| !! | CAGAGCTGTGTTAGCTCTGT+TGG | + | chr3_3:17090412-17090431 | Msa0444190:intron | 50.0% |
| TTGGAGGTAGACACACCCTT+TGG | + | chr3_3:17090551-17090570 | Msa0444190:intron | 50.0% | |
| !! | AGCTCATTTTGGGGGTTGAG+GGG | - | chr3_3:17091152-17091171 | None:intergenic | 50.0% |
| CAACCCTGGATAGCGTATAG+TGG | + | chr3_3:17091819-17091838 | Msa0444190:intron | 50.0% | |
| CATCCCACTATACGCTATCC+AGG | - | chr3_3:17091826-17091845 | None:intergenic | 50.0% | |
| CATCTGACAGTGGTCATGCT+AGG | + | chr3_3:17092673-17092692 | Msa0444190:intron | 50.0% | |
| AAGACGGGCCATTGTCTTCA+TGG | + | chr3_3:17092836-17092855 | Msa0444190:intron | 50.0% | |
| ATTCGAGGGTAGCTACCCAT+AGG | - | chr3_3:17093238-17093257 | None:intergenic | 50.0% | |
| TGCTGGTGTCTGTGATTCGA+GGG | - | chr3_3:17093252-17093271 | None:intergenic | 50.0% | |
| TTGCTGGTGTCTGTGATTCG+AGG | - | chr3_3:17093253-17093272 | None:intergenic | 50.0% | |
| GGCATAAAGAACCCAAGCCA+GGG | - | chr3_3:17093431-17093450 | None:intergenic | 50.0% | |
| AGGCATAAAGAACCCAAGCC+AGG | - | chr3_3:17093432-17093451 | None:intergenic | 50.0% | |
| GCTTGGGTTCTTTATGCCTG+TGG | + | chr3_3:17093433-17093452 | Msa0444190:intron | 50.0% | |
| ACCAGCCACAATATCACCAC+AGG | - | chr3_3:17093452-17093471 | None:intergenic | 50.0% | |
| !! | TTAGTTCTGTGCCTTTGCCC+TGG | + | chr3_3:17093504-17093523 | Msa0444190:intron | 50.0% |
| GTATGCCTGCGGTGATATTG+TGG | + | chr3_3:17093537-17093556 | Msa0444190:intron | 50.0% | |
| ! | TGGCTACGGTTTTGCAGGTT+TGG | + | chr3_3:17093661-17093680 | Msa0444190:intron | 50.0% |
| CGCAGAATTTGCCAAGTCCA+AGG | + | chr3_3:17093756-17093775 | Msa0444190:CDS | 50.0% | |
| CTTCCAGCCTCTTTCAGCAA+TGG | + | chr3_3:17094283-17094302 | Msa0444190:CDS | 50.0% | |
| GGGTACAAAGATCCTACAGC+TGG | - | chr3_3:17094329-17094348 | None:intergenic | 50.0% | |
| GGATCTTTGTACCCAAAGCG+TGG | + | chr3_3:17094335-17094354 | Msa0444190:CDS | 50.0% | |
| TGGCTTCAGTACCACGCTTT+GGG | - | chr3_3:17094349-17094368 | None:intergenic | 50.0% | |
| TTGGCTTCAGTACCACGCTT+TGG | - | chr3_3:17094350-17094369 | None:intergenic | 50.0% | |
| CGACGAAAAAGGGTCGGAGT+CGG | + | chr3_3:17087470-17087489 | Msa0444190:CDS | 55.0% | |
| CAAACCCATCGAGGGACGTT+CGG | - | chr3_3:17087511-17087530 | None:intergenic | 55.0% | |
| TCGACGCCAACGATGCAAAG+TGG | - | chr3_3:17087550-17087569 | None:intergenic | 55.0% | |
| GCTCTGTTTGCGGGTTTGGA+GGG | + | chr3_3:17088157-17088176 | Msa0444190:intron | 55.0% | |
| CTCTGTTTGCGGGTTTGGAG+GGG | + | chr3_3:17088158-17088177 | Msa0444190:intron | 55.0% | |
| GCCCCCCAACTTGAATAAGG+GGG | - | chr3_3:17088397-17088416 | None:intergenic | 55.0% | |
| AGTTCGGAGGGGAGGACTTT+AGG | - | chr3_3:17088457-17088476 | None:intergenic | 55.0% | |
| CTCTGTTTGCGAGTTCGGAG+GGG | - | chr3_3:17088468-17088487 | None:intergenic | 55.0% | |
| GCTCTGTTTGCGAGTTCGGA+GGG | - | chr3_3:17088469-17088488 | None:intergenic | 55.0% | |
| AGGCTCAAGGAGTTCCTCCT+CGG | + | chr3_3:17089138-17089157 | Msa0444190:CDS | 55.0% | |
| GGATGGGATGTATCACCACG+AGG | - | chr3_3:17089164-17089183 | None:intergenic | 55.0% | |
| CGTGGTGATACATCCCATCC+TGG | + | chr3_3:17089164-17089183 | Msa0444190:CDS | 55.0% | |
| TCGGAATCTGCGTCTGATGG+AGG | + | chr3_3:17089224-17089243 | Msa0444190:CDS | 55.0% | |
| GAATCTGCGTCTGATGGAGG+TGG | + | chr3_3:17089227-17089246 | Msa0444190:CDS | 55.0% | |
| ATCTGCGTCTGATGGAGGTG+GGG | + | chr3_3:17089229-17089248 | Msa0444190:CDS | 55.0% | |
| TGACCACCATGATCAACCCC+CGG | - | chr3_3:17089269-17089288 | None:intergenic | 55.0% | |
| GCGAACCTGTGTCTGTGTTG+TGG | - | chr3_3:17089357-17089376 | None:intergenic | 55.0% | |
| ! | CCCCTCCAAGCGTTTAAGAC+AGG | - | chr3_3:17089642-17089661 | None:intergenic | 55.0% |
| TCTTAAACGCTTGGAGGGGG+AGG | + | chr3_3:17089643-17089662 | Msa0444190:CDS | 55.0% | |
| AGCCTCGCTGAGGACATCTT+TGG | - | chr3_3:17089669-17089688 | None:intergenic | 55.0% | |
| !! | ATTTTGGGGGTTGAGGGGTG+AGG | - | chr3_3:17091147-17091166 | None:intergenic | 55.0% |
| AAGAACCCAAGCCAGGGCAA+AGG | - | chr3_3:17093425-17093444 | None:intergenic | 55.0% | |
| GCCTGTGGTGATATTGTGGC+TGG | + | chr3_3:17093448-17093467 | Msa0444190:intron | 55.0% | |
| ACCAGCCACAATATCACCGC+AGG | - | chr3_3:17093545-17093564 | None:intergenic | 55.0% | |
| ! | CATGCTGAAGTGCCAGCTGT+AGG | + | chr3_3:17094314-17094333 | Msa0444190:CDS | 55.0% |
| TGGATCCGAACGTCCCTCGA+TGG | + | chr3_3:17087503-17087522 | Msa0444190:CDS | 60.0% | |
| GGATCCGAACGTCCCTCGAT+GGG | + | chr3_3:17087504-17087523 | Msa0444190:CDS | 60.0% | |
| GGCTCTGTTTGCGGGTTTGG+AGG | + | chr3_3:17088156-17088175 | Msa0444190:intron | 60.0% | |
| CGGGTTTGGAGGGGAGTAGA+GGG | + | chr3_3:17088167-17088186 | Msa0444190:intron | 60.0% | |
| TGTTTGCGAGTTCGGAGGGG+AGG | - | chr3_3:17088465-17088484 | None:intergenic | 60.0% | |
| GGCTCTGTTTGCGAGTTCGG+AGG | - | chr3_3:17088470-17088489 | None:intergenic | 60.0% | |
| GGAGGAACTCCTTGAGCCTG+AGG | - | chr3_3:17089137-17089156 | None:intergenic | 60.0% | |
| GATGTATCACCACGAGGCCG+AGG | - | chr3_3:17089158-17089177 | None:intergenic | 60.0% | |
| TCTGCGTCTGATGGAGGTGG+GGG | + | chr3_3:17089230-17089249 | Msa0444190:CDS | 60.0% | |
| TGGGGGAAACTCGTTGTCCC+CGG | + | chr3_3:17089247-17089266 | Msa0444190:CDS | 60.0% | |
| ! | TTGTCCCCGGGGGTTGATCA+TGG | + | chr3_3:17089260-17089279 | Msa0444190:CDS | 60.0% |
| ACCACCATGATCAACCCCCG+GGG | - | chr3_3:17089267-17089286 | None:intergenic | 60.0% | |
| GACCACCATGATCAACCCCC+GGG | - | chr3_3:17089268-17089287 | None:intergenic | 60.0% | |
| GGCCAAAGATGTCCTCAGCG+AGG | + | chr3_3:17089664-17089683 | Msa0444190:CDS | 60.0% | |
| GGGGTTGAGGGGTGAGGTTA+GGG | - | chr3_3:17091141-17091160 | None:intergenic | 60.0% | |
| GTAGCGTAGCGGCATCGTAG+CGG | - | chr3_3:17091968-17091987 | None:intergenic | 60.0% | |
| GCTATAGCGGCGTAGCGTAG+CGG | - | chr3_3:17091979-17091998 | None:intergenic | 60.0% | |
| TCTGTGCCTTTGCCCTGGCT+CGG | + | chr3_3:17093509-17093528 | Msa0444190:intron | 60.0% | |
| GGCATACAGAACCCGAGCCA+GGG | - | chr3_3:17093524-17093543 | None:intergenic | 60.0% | |
| AGGCATACAGAACCCGAGCC+AGG | - | chr3_3:17093525-17093544 | None:intergenic | 60.0% | |
| GCTCGGGTTCTGTATGCCTG+CGG | + | chr3_3:17093526-17093545 | Msa0444190:intron | 60.0% | |
| GCCTGCGGTGATATTGTGGC+TGG | + | chr3_3:17093541-17093560 | Msa0444190:intron | 60.0% | |
| GGGTCGGAGTCGGAGCTTAC+CGG | + | chr3_3:17087480-17087499 | Msa0444190:CDS | 65.0% | |
| TCGGAGTCGGAGCTTACCGG+TGG | + | chr3_3:17087483-17087502 | Msa0444190:CDS | 65.0% | |
| CGAGGGACGTTCGGATCCAC+CGG | - | chr3_3:17087502-17087521 | None:intergenic | 65.0% | |
| GCGGGTTTGGAGGGGAGTAG+AGG | + | chr3_3:17088166-17088185 | Msa0444190:intron | 65.0% | |
| GTATCACCACGAGGCCGAGG+AGG | - | chr3_3:17089155-17089174 | None:intergenic | 65.0% | |
| GGGGGAAACTCGTTGTCCCC+GGG | + | chr3_3:17089248-17089267 | Msa0444190:CDS | 65.0% | |
| GGGGAAACTCGTTGTCCCCG+GGG | + | chr3_3:17089249-17089268 | Msa0444190:CDS | 65.0% | |
| GGGAAACTCGTTGTCCCCGG+GGG | + | chr3_3:17089250-17089269 | Msa0444190:CDS | 65.0% | |
| ! | TCCCCGGGGGTTGATCATGG+TGG | + | chr3_3:17089263-17089282 | Msa0444190:CDS | 65.0% |
| GGGGGTTGAGGGGTGAGGTT+AGG | - | chr3_3:17091142-17091161 | None:intergenic | 65.0% | |
| TTAGGGTCGCGCCTTTGCCC+TGG | + | chr3_3:17093411-17093430 | Msa0444190:intron | 65.0% | |
| TCGCGCCTTTGCCCTGGCTT+GGG | + | chr3_3:17093417-17093436 | Msa0444190:intron | 65.0% | |
| CTGTGCCTTTGCCCTGGCTC+GGG | + | chr3_3:17093510-17093529 | Msa0444190:intron | 65.0% | |
| CAGAACCCGAGCCAGGGCAA+AGG | - | chr3_3:17093518-17093537 | None:intergenic | 65.0% | |
| GGAGTTCCTCCTCGGCCTCG+TGG | + | chr3_3:17089146-17089165 | Msa0444190:CDS | 70.0% | |
| GTCGCGCCTTTGCCCTGGCT+TGG | + | chr3_3:17093416-17093435 | Msa0444190:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 17087417 | 17094641 | 17087417 | ID=Msa0444190;Name=Msa0444190 |
| chr3_3 | mRNA | 17087417 | 17094641 | 17087417 | ID=Msa0444190-mRNA-1;Parent=Msa0444190;Name=Msa0444190-mRNA-1;_AED=0.14;_eAED=0.14;_QI=16|1|1|1|1|1|10|253|517 |
| chr3_3 | exon | 17087417 | 17087610 | 17087417 | ID=Msa0444190-mRNA-1:exon:3557;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17089045 | 17089370 | 17089045 | ID=Msa0444190-mRNA-1:exon:3558;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17089542 | 17089712 | 17089542 | ID=Msa0444190-mRNA-1:exon:3559;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17090932 | 17091056 | 17090932 | ID=Msa0444190-mRNA-1:exon:3560;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17091258 | 17091306 | 17091258 | ID=Msa0444190-mRNA-1:exon:3561;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17091483 | 17091641 | 17091483 | ID=Msa0444190-mRNA-1:exon:3562;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17092462 | 17092547 | 17092462 | ID=Msa0444190-mRNA-1:exon:3563;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17093216 | 17093287 | 17093216 | ID=Msa0444190-mRNA-1:exon:3564;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17093678 | 17093827 | 17093678 | ID=Msa0444190-mRNA-1:exon:3565;Parent=Msa0444190-mRNA-1 |
| chr3_3 | exon | 17094151 | 17094641 | 17094151 | ID=Msa0444190-mRNA-1:exon:3566;Parent=Msa0444190-mRNA-1 |
| chr3_3 | five_prime_UTR | 17087417 | 17087432 | 17087417 | ID=Msa0444190-mRNA-1:five_prime_utr;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17087433 | 17087610 | 17087433 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17089045 | 17089370 | 17089045 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17089542 | 17089712 | 17089542 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17090932 | 17091056 | 17090932 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17091258 | 17091306 | 17091258 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17091483 | 17091641 | 17091483 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17092462 | 17092547 | 17092462 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17093216 | 17093287 | 17093216 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17093678 | 17093827 | 17093678 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | CDS | 17094151 | 17094388 | 17094151 | ID=Msa0444190-mRNA-1:cds;Parent=Msa0444190-mRNA-1 |
| chr3_3 | three_prime_UTR | 17094389 | 17094641 | 17094389 | ID=Msa0444190-mRNA-1:three_prime_utr;Parent=Msa0444190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
