Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319800 | sp|A0MDQ1|URM11_ARATH | 83.168 | 101 | 17 | 0 | 1 | 101 | 1 | 101 | 5.14e-56 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319800 | I3S2K8 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 1.37e-65 | 202 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028660 | Msa1319800 | 0.804690 | 1.914095e-49 | -8.615850e-47 |
| Msa0044000 | Msa1319800 | 0.808060 | 3.729066e-50 | -8.615850e-47 |
| Msa0076320 | Msa1319800 | 0.828185 | 1.034483e-54 | -8.615850e-47 |
| Msa0089360 | Msa1319800 | 0.800239 | 1.581939e-48 | -8.615850e-47 |
| Msa0114060 | Msa1319800 | 0.817396 | 3.370577e-52 | -8.615850e-47 |
| Msa0115270 | Msa1319800 | 0.858434 | 8.261897e-63 | -8.615850e-47 |
| Msa0608160 | Msa1319800 | 0.808306 | 3.304878e-50 | -8.615850e-47 |
| Msa0610840 | Msa1319800 | -0.811469 | 6.893361e-51 | -8.615850e-47 |
| Msa0616160 | Msa1319800 | 0.805933 | 1.050846e-49 | -8.615850e-47 |
| Msa0626820 | Msa1319800 | 0.803607 | 3.215328e-49 | -8.615850e-47 |
| Msa0632410 | Msa1319800 | 0.807317 | 5.361537e-50 | -8.615850e-47 |
| Msa0641670 | Msa1319800 | 0.816398 | 5.644787e-52 | -8.615850e-47 |
| Msa0644840 | Msa1319800 | 0.801031 | 1.090485e-48 | -8.615850e-47 |
| Msa0648080 | Msa1319800 | 0.811761 | 5.955270e-51 | -8.615850e-47 |
| Msa0653490 | Msa1319800 | 0.808184 | 3.508030e-50 | -8.615850e-47 |
| Msa0672690 | Msa1319800 | 0.801025 | 1.094059e-48 | -8.615850e-47 |
| Msa0673460 | Msa1319800 | 0.816918 | 4.315498e-52 | -8.615850e-47 |
| Msa0675690 | Msa1319800 | 0.818863 | 1.569830e-52 | -8.615850e-47 |
| Msa0681270 | Msa1319800 | 0.809757 | 1.615786e-50 | -8.615850e-47 |
| Msa0688480 | Msa1319800 | 0.820011 | 8.590770e-53 | -8.615850e-47 |
| Msa0701010 | Msa1319800 | 0.824140 | 9.485595e-54 | -8.615850e-47 |
| Msa0740510 | Msa1319800 | 0.819384 | 1.194627e-52 | -8.615850e-47 |
| Msa0743720 | Msa1319800 | 0.838099 | 3.516187e-57 | -8.615850e-47 |
| Msa0753720 | Msa1319800 | 0.822545 | 2.237441e-53 | -8.615850e-47 |
| Msa0760130 | Msa1319800 | 0.801731 | 7.839783e-49 | -8.615850e-47 |
| Msa0766630 | Msa1319800 | 0.809473 | 1.860159e-50 | -8.615850e-47 |
| Msa0768290 | Msa1319800 | 0.806697 | 7.251944e-50 | -8.615850e-47 |
| Msa0768370 | Msa1319800 | 0.813446 | 2.549337e-51 | -8.615850e-47 |
| Msa0773840 | Msa1319800 | 0.812092 | 5.045562e-51 | -8.615850e-47 |
| Msa0777230 | Msa1319800 | 0.801655 | 8.125480e-49 | -8.615850e-47 |
| Msa0802830 | Msa1319800 | 0.812819 | 3.499596e-51 | -8.615850e-47 |
| Msa0820120 | Msa1319800 | 0.801036 | 1.088234e-48 | -8.615850e-47 |
| Msa0820770 | Msa1319800 | 0.823491 | 1.346173e-53 | -8.615850e-47 |
| Msa0820850 | Msa1319800 | 0.851083 | 1.117783e-60 | -8.615850e-47 |
| Msa0824590 | Msa1319800 | 0.817738 | 2.822428e-52 | -8.615850e-47 |
| Msa0828940 | Msa1319800 | 0.808668 | 2.765647e-50 | -8.615850e-47 |
| Msa0832340 | Msa1319800 | 0.815402 | 9.414426e-52 | -8.615850e-47 |
| Msa0127800 | Msa1319800 | 0.809875 | 1.523974e-50 | -8.615850e-47 |
| Msa0153800 | Msa1319800 | 0.811296 | 7.515398e-51 | -8.615850e-47 |
| Msa0180500 | Msa1319800 | 0.800666 | 1.295048e-48 | -8.615850e-47 |
| Msa0220740 | Msa1319800 | 0.834133 | 3.573983e-56 | -8.615850e-47 |
| Msa0223260 | Msa1319800 | 0.819992 | 8.679841e-53 | -8.615850e-47 |
| Msa0233300 | Msa1319800 | 0.805293 | 1.431613e-49 | -8.615850e-47 |
| Msa0233530 | Msa1319800 | 0.802377 | 5.774461e-49 | -8.615850e-47 |
| Msa0236510 | Msa1319800 | -0.807393 | 5.168085e-50 | -8.615850e-47 |
| Msa1233890 | Msa1319800 | 0.809918 | 1.491944e-50 | -8.615850e-47 |
| Msa1244250 | Msa1319800 | 0.821175 | 4.641666e-53 | -8.615850e-47 |
| Msa1249460 | Msa1319800 | 0.839336 | 1.683886e-57 | -8.615850e-47 |
| Msa1249490 | Msa1319800 | 0.823316 | 1.479049e-53 | -8.615850e-47 |
| Msa1253020 | Msa1319800 | 0.837878 | 4.008692e-57 | -8.615850e-47 |
| Msa1259590 | Msa1319800 | -0.809089 | 2.247777e-50 | -8.615850e-47 |
| Msa1275360 | Msa1319800 | 0.836652 | 8.255260e-57 | -8.615850e-47 |
| Msa1276890 | Msa1319800 | 0.801535 | 8.600500e-49 | -8.615850e-47 |
| Msa1277660 | Msa1319800 | 0.818896 | 1.542765e-52 | -8.615850e-47 |
| Msa1284680 | Msa1319800 | 0.841348 | 5.018887e-58 | -8.615850e-47 |
| Msa1293510 | Msa1319800 | 0.802437 | 5.612292e-49 | -8.615850e-47 |
| Msa1296940 | Msa1319800 | 0.810693 | 1.015420e-50 | -8.615850e-47 |
| Msa1299290 | Msa1319800 | -0.801106 | 1.052666e-48 | -8.615850e-47 |
| Msa1319800 | Msa1348950 | 0.809994 | 1.437099e-50 | -8.615850e-47 |
| Msa1319800 | Msa1353470 | 0.814027 | 1.898814e-51 | -8.615850e-47 |
| Msa1319800 | Msa1362880 | 0.832747 | 7.922031e-56 | -8.615850e-47 |
| Msa1319800 | Msa1370070 | -0.800636 | 1.313122e-48 | -8.615850e-47 |
| Msa1319800 | Msa1397860 | 0.810530 | 1.100998e-50 | -8.615850e-47 |
| Msa1319800 | Msa1402770 | 0.819373 | 1.201515e-52 | -8.615850e-47 |
| Msa1319800 | Msa1411020 | 0.815242 | 1.022245e-51 | -8.615850e-47 |
| Msa1319800 | Msa1420490 | 0.818085 | 2.355763e-52 | -8.615850e-47 |
| Msa1319800 | Msa1423390 | 0.821603 | 3.697754e-53 | -8.615850e-47 |
| Msa1319800 | Msa1424290 | 0.810114 | 1.353934e-50 | -8.615850e-47 |
| Msa1319800 | Msa1427230 | 0.801397 | 9.177674e-49 | -8.615850e-47 |
| Msa1319800 | Msa1430680 | 0.808777 | 2.621753e-50 | -8.615850e-47 |
| Msa1319800 | Msa1434350 | 0.811253 | 7.677560e-51 | -8.615850e-47 |
| Msa1319800 | Msa1439320 | 0.811711 | 6.106896e-51 | -8.615850e-47 |
| Msa1319800 | Msa1440370 | 0.816975 | 4.191547e-52 | -8.615850e-47 |
| Msa1319800 | Msa1440810 | 0.812172 | 4.845302e-51 | -8.615850e-47 |
| Msa1319800 | Msa1444740 | 0.802027 | 6.817630e-49 | -8.615850e-47 |
| Msa1319800 | Msa1451550 | 0.809448 | 1.883220e-50 | -8.615850e-47 |
| Msa1319800 | Msa1452240 | 0.828152 | 1.053858e-54 | -8.615850e-47 |
| Msa0379640 | Msa1319800 | 0.807950 | 3.935433e-50 | -8.615850e-47 |
| Msa0390400 | Msa1319800 | -0.800068 | 1.714174e-48 | -8.615850e-47 |
| Msa0391430 | Msa1319800 | 0.811716 | 6.092219e-51 | -8.615850e-47 |
| Msa0402290 | Msa1319800 | 0.820064 | 8.357339e-53 | -8.615850e-47 |
| Msa0402790 | Msa1319800 | 0.800539 | 1.374338e-48 | -8.615850e-47 |
| Msa0416300 | Msa1319800 | 0.808357 | 3.222277e-50 | -8.615850e-47 |
| Msa0416650 | Msa1319800 | 0.807976 | 3.885655e-50 | -8.615850e-47 |
| Msa0424320 | Msa1319800 | 0.805093 | 1.576787e-49 | -8.615850e-47 |
| Msa0440400 | Msa1319800 | 0.800641 | 1.310016e-48 | -8.615850e-47 |
| Msa0440750 | Msa1319800 | 0.804048 | 2.603676e-49 | -8.615850e-47 |
| Msa0442200 | Msa1319800 | 0.807883 | 4.066330e-50 | -8.615850e-47 |
| Msa0444190 | Msa1319800 | 0.811579 | 6.525200e-51 | -8.615850e-47 |
| Msa0444750 | Msa1319800 | -0.819947 | 8.886668e-53 | -8.615850e-47 |
| Msa0453350 | Msa1319800 | 0.822396 | 2.422438e-53 | -8.615850e-47 |
| Msa0459260 | Msa1319800 | 0.816691 | 4.852584e-52 | -8.615850e-47 |
| Msa0479340 | Msa1319800 | 0.816306 | 5.918296e-52 | -8.615850e-47 |
| Msa0992020 | Msa1319800 | 0.812101 | 5.022228e-51 | -8.615850e-47 |
| Msa0993730 | Msa1319800 | 0.813504 | 2.474974e-51 | -8.615850e-47 |
| Msa0993750 | Msa1319800 | 0.807187 | 5.712889e-50 | -8.615850e-47 |
| Msa0998690 | Msa1319800 | 0.819618 | 1.056512e-52 | -8.615850e-47 |
| Msa1000900 | Msa1319800 | 0.814919 | 1.205612e-51 | -8.615850e-47 |
| Msa1003620 | Msa1319800 | 0.801956 | 7.049761e-49 | -8.615850e-47 |
| Msa1012660 | Msa1319800 | 0.801395 | 9.186517e-49 | -8.615850e-47 |
| Msa1014540 | Msa1319800 | 0.837320 | 5.570979e-57 | -8.615850e-47 |
| Msa1023180 | Msa1319800 | 0.803852 | 2.860637e-49 | -8.615850e-47 |
| Msa1030970 | Msa1319800 | 0.808091 | 3.671428e-50 | -8.615850e-47 |
| Msa1043050 | Msa1319800 | 0.805754 | 1.145916e-49 | -8.615850e-47 |
| Msa1045200 | Msa1319800 | 0.828491 | 8.727502e-55 | -8.615850e-47 |
| Msa1075220 | Msa1319800 | -0.802149 | 6.434140e-49 | -8.615850e-47 |
| Msa1082500 | Msa1319800 | 0.806851 | 6.729657e-50 | -8.615850e-47 |
| Msa1085740 | Msa1319800 | 0.809850 | 1.543087e-50 | -8.615850e-47 |
| Msa1090260 | Msa1319800 | 0.803573 | 3.268608e-49 | -8.615850e-47 |
| Msa0240420 | Msa1319800 | 0.804874 | 1.751523e-49 | -8.615850e-47 |
| Msa0288100 | Msa1319800 | 0.802266 | 6.087942e-49 | -8.615850e-47 |
| Msa0305190 | Msa1319800 | 0.800278 | 1.553326e-48 | -8.615850e-47 |
| Msa0306210 | Msa1319800 | -0.805027 | 1.627761e-49 | -8.615850e-47 |
| Msa0319170 | Msa1319800 | 0.818655 | 1.749861e-52 | -8.615850e-47 |
| Msa0343850 | Msa1319800 | 0.820465 | 6.760528e-53 | -8.615850e-47 |
| Msa0355220 | Msa1319800 | 0.818794 | 1.627341e-52 | -8.615850e-47 |
| Msa0359030 | Msa1319800 | 0.817233 | 3.668153e-52 | -8.615850e-47 |
| Msa1108760 | Msa1319800 | 0.816563 | 5.185214e-52 | -8.615850e-47 |
| Msa1135470 | Msa1319800 | 0.802236 | 6.174397e-49 | -8.615850e-47 |
| Msa1137570 | Msa1319800 | 0.819387 | 1.192867e-52 | -8.615850e-47 |
| Msa1150710 | Msa1319800 | 0.810053 | 1.395188e-50 | -8.615850e-47 |
| Msa1162550 | Msa1319800 | -0.818762 | 1.654854e-52 | -8.615850e-47 |
| Msa1173100 | Msa1319800 | 0.806157 | 9.425032e-50 | -8.615850e-47 |
| Msa1174040 | Msa1319800 | 0.842028 | 3.319694e-58 | -8.615850e-47 |
| Msa1205130 | Msa1319800 | 0.819093 | 1.391559e-52 | -8.615850e-47 |
| Msa1210220 | Msa1319800 | 0.811728 | 6.054001e-51 | -8.615850e-47 |
| Msa1210940 | Msa1319800 | 0.814714 | 1.338346e-51 | -8.615850e-47 |
| Msa1211140 | Msa1319800 | -0.802525 | 5.384395e-49 | -8.615850e-47 |
| Msa0488270 | Msa1319800 | 0.820663 | 6.089940e-53 | -8.615850e-47 |
| Msa0493630 | Msa1319800 | 0.800094 | 1.693065e-48 | -8.615850e-47 |
| Msa0498650 | Msa1319800 | 0.802360 | 5.821533e-49 | -8.615850e-47 |
| Msa0512750 | Msa1319800 | 0.802357 | 5.829746e-49 | -8.615850e-47 |
| Msa0517110 | Msa1319800 | 0.816686 | 4.865536e-52 | -8.615850e-47 |
| Msa0520940 | Msa1319800 | 0.806790 | 6.932200e-50 | -8.615850e-47 |
| Msa0521430 | Msa1319800 | 0.814785 | 1.290662e-51 | -8.615850e-47 |
| Msa0523940 | Msa1319800 | 0.820742 | 5.841701e-53 | -8.615850e-47 |
| Msa0529040 | Msa1319800 | 0.815325 | 9.796022e-52 | -8.615850e-47 |
| Msa0545700 | Msa1319800 | 0.814732 | 1.326125e-51 | -8.615850e-47 |
| Msa0554740 | Msa1319800 | 0.809343 | 1.983571e-50 | -8.615850e-47 |
| Msa0562440 | Msa1319800 | 0.821849 | 3.244582e-53 | -8.615850e-47 |
| Msa0575010 | Msa1319800 | 0.828976 | 6.664454e-55 | -8.615850e-47 |
| Msa0585230 | Msa1319800 | 0.800762 | 1.237625e-48 | -8.615850e-47 |
| Msa0595230 | Msa1319800 | 0.806701 | 7.240644e-50 | -8.615850e-47 |
| Msa0598780 | Msa1319800 | 0.801739 | 7.810839e-49 | -8.615850e-47 |
| Msa0842650 | Msa1319800 | 0.804978 | 1.666081e-49 | -8.615850e-47 |
| Msa0844490 | Msa1319800 | 0.803862 | 2.846173e-49 | -8.615850e-47 |
| Msa0849030 | Msa1319800 | 0.830007 | 3.742372e-55 | -8.615850e-47 |
| Msa0849040 | Msa1319800 | 0.800426 | 1.449471e-48 | -8.615850e-47 |
| Msa0861090 | Msa1319800 | 0.819590 | 1.072436e-52 | -8.615850e-47 |
| Msa0861130 | Msa1319800 | 0.848108 | 7.559962e-60 | -8.615850e-47 |
| Msa0864070 | Msa1319800 | 0.814305 | 1.648118e-51 | -8.615850e-47 |
| Msa0876580 | Msa1319800 | 0.821338 | 4.258067e-53 | -8.615850e-47 |
| Msa0877250 | Msa1319800 | 0.816706 | 4.816489e-52 | -8.615850e-47 |
| Msa0888260 | Msa1319800 | 0.805833 | 1.102812e-49 | -8.615850e-47 |
| Msa0899430 | Msa1319800 | 0.801772 | 7.689685e-49 | -8.615850e-47 |
| Msa0899450 | Msa1319800 | 0.812502 | 4.105658e-51 | -8.615850e-47 |
| Msa0907070 | Msa1319800 | 0.802604 | 5.185019e-49 | -8.615850e-47 |
| Msa0907260 | Msa1319800 | 0.803510 | 3.368127e-49 | -8.615850e-47 |
| Msa0916690 | Msa1319800 | 0.812290 | 4.566478e-51 | -8.615850e-47 |
| Msa0925190 | Msa1319800 | 0.823374 | 1.433913e-53 | -8.615850e-47 |
| Msa0927380 | Msa1319800 | 0.819000 | 1.461136e-52 | -8.615850e-47 |
| Msa0931520 | Msa1319800 | 0.800663 | 1.296899e-48 | -8.615850e-47 |
| Msa0932830 | Msa1319800 | 0.838708 | 2.449344e-57 | -8.615850e-47 |
| Msa0942200 | Msa1319800 | 0.809211 | 2.116806e-50 | -8.615850e-47 |
| Msa0953120 | Msa1319800 | 0.818008 | 2.452046e-52 | -8.615850e-47 |
| Msa0956270 | Msa1319800 | 0.800559 | 1.361480e-48 | -8.615850e-47 |
| Msa0969520 | Msa1319800 | 0.801336 | 9.447879e-49 | -8.615850e-47 |
| Msa0971020 | Msa1319800 | 0.811776 | 5.910315e-51 | -8.615850e-47 |
| Msa0976670 | Msa1319800 | 0.814588 | 1.427265e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319800 | MtrunA17_Chr8g0350821 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 2.64e-69 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319800 | AT2G45695.1 | 83.168 | 101 | 17 | 0 | 1 | 101 | 1 | 101 | 5.23e-57 | 171 |
| Msa1319800 | AT3G61113.1 | 84.158 | 101 | 14 | 1 | 1 | 101 | 1 | 99 | 4.87e-56 | 169 |
Find 49 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAGCTTACACTTGAATT+TGG | 0.145864 | 8_4:-23695733 | Msa1319800:CDS |
| CCTTTCTCTCTCTAGGGTTT+TGG | 0.153169 | 8_4:-23695784 | Msa1319800:five_prime_UTR |
| CTATTATGCTTTATGGCTTT+TGG | 0.170764 | 8_4:-23693280 | Msa1319800:three_prime_UTR |
| CCATGAAAGGATTGCTTTCT+TGG | 0.196751 | 8_4:-23694518 | Msa1319800:CDS |
| TCTCCTTTCATGAACATTTC+AGG | 0.230075 | 8_4:+23694468 | None:intergenic |
| ACTTATCCACTTGTTCATAT+TGG | 0.268978 | 8_4:-23693155 | Msa1319800:three_prime_UTR |
| TAAGGTTTGGCAACAAATTC+AGG | 0.269985 | 8_4:-23693051 | Msa1319800:three_prime_UTR |
| GTTGAATTTGAACAACAAAA+TGG | 0.280242 | 8_4:-23694647 | Msa1319800:CDS |
| GCATACCTGCTTAGGAATAT+AGG | 0.290955 | 8_4:-23692997 | Msa1319800:three_prime_UTR |
| GGTGCGAACCAACTTGATTA+AGG | 0.317397 | 8_4:-23694496 | Msa1319800:CDS |
| CCAAGAAAGCAATCCTTTCA+TGG | 0.322793 | 8_4:+23694518 | None:intergenic |
| CATACCTGCTTAGGAATATA+GGG | 0.338452 | 8_4:-23692996 | Msa1319800:three_prime_UTR |
| TGCAGCTTACACTTGAATTT+GGG | 0.364775 | 8_4:-23695732 | Msa1319800:intron |
| ATTCGATCCTTTCTCTCTCT+AGG | 0.393755 | 8_4:-23695791 | Msa1319800:five_prime_UTR |
| TCATCCTGCTTCAATTCAAT+TGG | 0.403916 | 8_4:+23693097 | None:intergenic |
| TTATATTAACAAATTAAAGT+TGG | 0.410513 | 8_4:-23693236 | Msa1319800:three_prime_UTR |
| CATGAAAGGATTGCTTTCTT+GGG | 0.426218 | 8_4:-23694517 | Msa1319800:CDS |
| GGATCTTCATCTTTGACTGT+TGG | 0.436137 | 8_4:-23693134 | Msa1319800:three_prime_UTR |
| TCCTTGTGAATGATTGTGAT+TGG | 0.440388 | 8_4:-23693517 | Msa1319800:CDS |
| GGCATTTGGCATACCTGCTT+AGG | 0.440725 | 8_4:-23693005 | Msa1319800:three_prime_UTR |
| ATCAAACTGTCATATACATA+AGG | 0.440729 | 8_4:-23693069 | Msa1319800:three_prime_UTR |
| TTCGATCCTTTCTCTCTCTA+GGG | 0.450181 | 8_4:-23695790 | Msa1319800:five_prime_UTR |
| ACTGTCATATACATAAGGTT+TGG | 0.458676 | 8_4:-23693064 | Msa1319800:three_prime_UTR |
| GTCTTTATATCAACCTTGCA+TGG | 0.470477 | 8_4:-23693446 | Msa1319800:CDS |
| GACACCAATTGAATTGAAGC+AGG | 0.478779 | 8_4:-23693101 | Msa1319800:three_prime_UTR |
| TCTAACAGTGAGAGATGAAA+GGG | 0.480291 | 8_4:+23695832 | None:intergenic |
| GTTACTTAAATGCTGCTGTA+AGG | 0.485160 | 8_4:-23693178 | Msa1319800:three_prime_UTR |
| AGGCCTCTCCTTAATCAAGT+TGG | 0.492347 | 8_4:+23694488 | None:intergenic |
| CCAAAACCCTAGAGAGAGAA+AGG | 0.494351 | 8_4:+23695784 | None:intergenic |
| CCTTGTGAATGATTGTGATT+GGG | 0.497501 | 8_4:-23693516 | Msa1319800:CDS |
| AAATCCCTATATTCCTAAGC+AGG | 0.507505 | 8_4:+23692992 | None:intergenic |
| GGTTTGTCTTGCAGTAGACC+TGG | 0.512150 | 8_4:-23693548 | Msa1319800:intron |
| TTCACAAGGACGAGAACTCC+AGG | 0.527292 | 8_4:+23693530 | None:intergenic |
| TAGCCTTCACCATGACTACA+AGG | 0.527842 | 8_4:+23693370 | None:intergenic |
| CTCTAACAGTGAGAGATGAA+AGG | 0.543799 | 8_4:+23695831 | None:intergenic |
| GAAGATCCAATATGAACAAG+TGG | 0.560116 | 8_4:+23693149 | None:intergenic |
| AATCCTTGTAGTCATGGTGA+AGG | 0.583370 | 8_4:-23693373 | Msa1319800:three_prime_UTR |
| AGGCCTGAAATGTTCATGAA+AGG | 0.585846 | 8_4:-23694471 | Msa1319800:CDS |
| CCCAATCACAATCATTCACA+AGG | 0.609803 | 8_4:+23693516 | None:intergenic |
| TAGAAGCTAACCACCATGCA+AGG | 0.612028 | 8_4:+23693433 | None:intergenic |
| AGCAGCATTTAAGTAACACA+AGG | 0.613824 | 8_4:+23693184 | None:intergenic |
| CGGTCAACTGAGTACTACAC+TGG | 0.622707 | 8_4:-23693486 | Msa1319800:CDS |
| AGCGAAAGATATGTAAGCAT+AGG | 0.625724 | 8_4:+23693211 | None:intergenic |
| ACAACAAAATGGAGAAGACA+AGG | 0.661061 | 8_4:-23694636 | Msa1319800:intron |
| TTTATATCAACCTTGCATGG+TGG | 0.664106 | 8_4:-23693443 | Msa1319800:CDS |
| GAACCAACTTGATTAAGGAG+AGG | 0.707815 | 8_4:-23694491 | Msa1319800:CDS |
| GCAGCATTTAAGTAACACAA+GGG | 0.714641 | 8_4:+23693185 | None:intergenic |
| GATTGTGATTGGGAGCTAAG+CGG | 0.723043 | 8_4:-23693506 | Msa1319800:CDS |
| CTAACAGTGAGAGATGAAAG+GGG | 0.724108 | 8_4:+23695833 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTCTTAAATTATTAT+GGG | - | chr8_4:23693722-23693741 | Msa1319800:intron | 10.0% |
| !!! | AATTTTATTTGAGTAATTAA+TGG | - | chr8_4:23694478-23694497 | Msa1319800:CDS | 10.0% |
| !! | TTATATTAACAAATTAAAGT+TGG | - | chr8_4:23695610-23695629 | Msa1319800:intron | 10.0% |
| !! | ATAAGTGAAATAAGATAAAA+AGG | + | chr8_4:23693143-23693162 | None:intergenic | 15.0% |
| !! | TACGAATTAAATTAACAAAT+TGG | - | chr8_4:23693222-23693241 | Msa1319800:three_prime_UTR | 15.0% |
| !!! | GTCATTTTCTTAAATTATTA+TGG | - | chr8_4:23693721-23693740 | Msa1319800:intron | 15.0% |
| !!! | TTATACAGTTATTTTAGTTT+TGG | - | chr8_4:23693951-23693970 | Msa1319800:intron | 15.0% |
| !!! | TTAGAAATTTAATTTTTGTC+TGG | - | chr8_4:23694101-23694120 | Msa1319800:intron | 15.0% |
| !!! | TATTTTTCTATTATGCTTTA+TGG | - | chr8_4:23695559-23695578 | Msa1319800:intron | 15.0% |
| !!! | GATGTATTTTTCATAGTTTT+AGG | - | chr8_4:23693276-23693295 | Msa1319800:three_prime_UTR | 20.0% |
| !! | TTTATCTTATTCGTTTGTTT+AGG | - | chr8_4:23693984-23694003 | Msa1319800:intron | 20.0% |
| !! | AGTATGATTAATATCACATT+TGG | - | chr8_4:23694051-23694070 | Msa1319800:intron | 20.0% |
| !!! | AAATTTAATTTTTGTCTGGT+TGG | - | chr8_4:23694105-23694124 | Msa1319800:intron | 20.0% |
| !! | GTATATGACTTCAAAATTAT+TGG | - | chr8_4:23694235-23694254 | Msa1319800:intron | 20.0% |
| !! | ATAAAATTAAGCTCACTTTA+GGG | + | chr8_4:23694466-23694485 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGCTCACTTT+AGG | + | chr8_4:23694467-23694486 | None:intergenic | 20.0% |
| !!! | TATTAGATGATCATTTTTCT+TGG | - | chr8_4:23694585-23694604 | Msa1319800:intron | 20.0% |
| !!! | TGATAAGATTTTATAAAGAG+TGG | + | chr8_4:23694756-23694775 | None:intergenic | 20.0% |
| !! | TCAAAATACAAACTCTATTA+TGG | + | chr8_4:23694899-23694918 | None:intergenic | 20.0% |
| !! | ATCTTATATCAACATATCAA+AGG | + | chr8_4:23695198-23695217 | None:intergenic | 20.0% |
| !!! | TATTACACATTTTATGTATC+TGG | + | chr8_4:23695238-23695257 | None:intergenic | 20.0% |
| !! | TGTGTAATATTATCATTACA+TGG | - | chr8_4:23695249-23695268 | Msa1319800:intron | 20.0% |
| ! | AGCTATTGAAATCAACTAAA+AGG | + | chr8_4:23693304-23693323 | None:intergenic | 25.0% |
| !! | TTAGTTGATTTCAATAGCTT+AGG | - | chr8_4:23693305-23693324 | Msa1319800:three_prime_UTR | 25.0% |
| !! | TAGTTGATTTCAATAGCTTA+GGG | - | chr8_4:23693306-23693325 | Msa1319800:three_prime_UTR | 25.0% |
| ! | CATAAGTTCATTGATATAAC+TGG | - | chr8_4:23693375-23693394 | Msa1319800:three_prime_UTR | 25.0% |
| ! | ATAGCAATAGAACTAAGTTT+AGG | + | chr8_4:23693879-23693898 | None:intergenic | 25.0% |
| !!! | AAACTTAGTTCTATTGCTAT+AGG | - | chr8_4:23693879-23693898 | Msa1319800:intron | 25.0% |
| ! | ATATCTTAATCCAATATTGC+TGG | - | chr8_4:23693909-23693928 | Msa1319800:intron | 25.0% |
| ! | AATAGTAATTCCAGCAATAT+TGG | + | chr8_4:23693922-23693941 | None:intergenic | 25.0% |
| ! | AACAAACGAATAAGATAAAG+TGG | + | chr8_4:23693983-23694002 | None:intergenic | 25.0% |
| !! | ATTGACATTGTGAATCTTTT+TGG | + | chr8_4:23694179-23694198 | None:intergenic | 25.0% |
| ! | GTTGAATTTGAACAACAAAA+TGG | - | chr8_4:23694199-23694218 | Msa1319800:intron | 25.0% |
| !! | ACTTCAAAATTATTGGTCTA+TGG | - | chr8_4:23694242-23694261 | Msa1319800:intron | 25.0% |
| ! | TAACTAATGATGCATGATTT+GGG | + | chr8_4:23694433-23694452 | None:intergenic | 25.0% |
| ! | TTAACTAATGATGCATGATT+TGG | + | chr8_4:23694434-23694453 | None:intergenic | 25.0% |
| !! | AATCATTTAGGTTCAGATAA+TGG | + | chr8_4:23694539-23694558 | None:intergenic | 25.0% |
| ! | AACAGAGAAATTGAATAGAA+AGG | - | chr8_4:23694693-23694712 | Msa1319800:CDS | 25.0% |
| ! | AGAAATTGAATAGAAAGGAA+TGG | - | chr8_4:23694698-23694717 | Msa1319800:CDS | 25.0% |
| ! | ATCAAACTGTCATATACATA+AGG | - | chr8_4:23695777-23695796 | Msa1319800:five_prime_UTR | 25.0% |
| !!! | AAATTGGTTGTTTTTCACCA+TGG | - | chr8_4:23693238-23693257 | Msa1319800:three_prime_UTR | 30.0% |
| !! | TTGTTTTTCACCATGGTTTA+GGG | - | chr8_4:23693245-23693264 | Msa1319800:three_prime_UTR | 30.0% |
| !! | TTTTGTCTGGTTGGTTAAAA+TGG | - | chr8_4:23694114-23694133 | Msa1319800:intron | 30.0% |
| AGTAATTAATGGTTTAGCCA+TGG | - | chr8_4:23694489-23694508 | Msa1319800:CDS | 30.0% | |
| ACTTAAGATCAAATTGACCA+TGG | + | chr8_4:23694509-23694528 | None:intergenic | 30.0% | |
| GAACCTAAATGATTGAATGA+TGG | - | chr8_4:23694545-23694564 | Msa1319800:intron | 30.0% | |
| TGTCCATCATTCAATCATTT+AGG | + | chr8_4:23694551-23694570 | None:intergenic | 30.0% | |
| AATCGAATAGAAAGTTTCTG+TGG | - | chr8_4:23694668-23694687 | Msa1319800:CDS | 30.0% | |
| ! | AATTCAATGAGAGTACATGA+AGG | - | chr8_4:23694980-23694999 | Msa1319800:intron | 30.0% |
| !! | GAACTATTTATTTCTGTCTG+TGG | - | chr8_4:23695277-23695296 | Msa1319800:intron | 30.0% |
| AAAAACAATCCTTGTAGTCA+TGG | - | chr8_4:23695467-23695486 | Msa1319800:intron | 30.0% | |
| ! | CTATTATGCTTTATGGCTTT+TGG | - | chr8_4:23695566-23695585 | Msa1319800:intron | 30.0% |
| ACTTATCCACTTGTTCATAT+TGG | - | chr8_4:23695691-23695710 | Msa1319800:intron | 30.0% | |
| ACTGTCATATACATAAGGTT+TGG | - | chr8_4:23695782-23695801 | Msa1319800:five_prime_UTR | 30.0% | |
| TCTAACAGTGAGAGATGAAA+GGG | + | chr8_4:23693017-23693036 | None:intergenic | 35.0% | |
| ATGCAGCTTACACTTGAATT+TGG | - | chr8_4:23693113-23693132 | Msa1319800:three_prime_UTR | 35.0% | |
| TGCAGCTTACACTTGAATTT+GGG | - | chr8_4:23693114-23693133 | Msa1319800:three_prime_UTR | 35.0% | |
| !!! | GTTGTTTTTCACCATGGTTT+AGG | - | chr8_4:23693244-23693263 | Msa1319800:three_prime_UTR | 35.0% |
| TCAAATTAGTCCCTAAACCA+TGG | + | chr8_4:23693258-23693277 | None:intergenic | 35.0% | |
| CAATAGCTTAGGGACTAATT+TGG | - | chr8_4:23693316-23693335 | Msa1319800:three_prime_UTR | 35.0% | |
| ATTTGAACTGATTGCCTAGT+TGG | - | chr8_4:23693409-23693428 | Msa1319800:three_prime_UTR | 35.0% | |
| ATAGGTTTGACCAAATGAAC+CGG | + | chr8_4:23693439-23693458 | None:intergenic | 35.0% | |
| TTCAGTGTAGTTACATGTGT+CGG | - | chr8_4:23693527-23693546 | Msa1319800:CDS | 35.0% | |
| TAATTTGACCCTATGAAGCA+CGG | + | chr8_4:23693583-23693602 | None:intergenic | 35.0% | |
| TATTATGGGTTTCAGCGTAT+TGG | - | chr8_4:23693736-23693755 | Msa1319800:intron | 35.0% | |
| ! | TAGTTCTATTGCTATAGGCA+TGG | - | chr8_4:23693884-23693903 | Msa1319800:intron | 35.0% |
| AAAATGGTTGAAACATGCAG+AGG | - | chr8_4:23694130-23694149 | Msa1319800:intron | 35.0% | |
| AAATGGTTGAAACATGCAGA+GGG | - | chr8_4:23694131-23694150 | Msa1319800:intron | 35.0% | |
| ACAACAAAATGGAGAAGACA+AGG | - | chr8_4:23694210-23694229 | Msa1319800:intron | 35.0% | |
| ! | GCTTTTCAGTTAACCATGAA+AGG | - | chr8_4:23694315-23694334 | Msa1319800:intron | 35.0% |
| CATGAAAGGATTGCTTTCTT+GGG | - | chr8_4:23694329-23694348 | Msa1319800:intron | 35.0% | |
| TCTCCTTTCATGAACATTTC+AGG | + | chr8_4:23694381-23694400 | None:intergenic | 35.0% | |
| ACCACATAAAAACCTTCCAT+GGG | + | chr8_4:23694639-23694658 | None:intergenic | 35.0% | |
| TCTGTTAGAGACATATCTTC+TGG | - | chr8_4:23695116-23695135 | Msa1319800:intron | 35.0% | |
| TGATCAGTATGATCACCATA+AGG | + | chr8_4:23695151-23695170 | None:intergenic | 35.0% | |
| TCCTTGTGAATGATTGTGAT+TGG | - | chr8_4:23695329-23695348 | Msa1319800:intron | 35.0% | |
| CCTTGTGAATGATTGTGATT+GGG | - | chr8_4:23695330-23695349 | Msa1319800:intron | 35.0% | |
| TACACTGGAAGAAAAAGATG+TGG | - | chr8_4:23695375-23695394 | Msa1319800:intron | 35.0% | |
| GTCTTTATATCAACCTTGCA+TGG | - | chr8_4:23695400-23695419 | Msa1319800:intron | 35.0% | |
| TTTATATCAACCTTGCATGG+TGG | - | chr8_4:23695403-23695422 | Msa1319800:intron | 35.0% | |
| AGCGAAAGATATGTAAGCAT+AGG | + | chr8_4:23695638-23695657 | None:intergenic | 35.0% | |
| GCAGCATTTAAGTAACACAA+GGG | + | chr8_4:23695664-23695683 | None:intergenic | 35.0% | |
| AGCAGCATTTAAGTAACACA+AGG | + | chr8_4:23695665-23695684 | None:intergenic | 35.0% | |
| GTTACTTAAATGCTGCTGTA+AGG | - | chr8_4:23695668-23695687 | Msa1319800:intron | 35.0% | |
| GAAGATCCAATATGAACAAG+TGG | + | chr8_4:23695700-23695719 | None:intergenic | 35.0% | |
| TCATCCTGCTTCAATTCAAT+TGG | + | chr8_4:23695752-23695771 | None:intergenic | 35.0% | |
| TAAGGTTTGGCAACAAATTC+AGG | - | chr8_4:23695795-23695814 | Msa1319800:five_prime_UTR | 35.0% | |
| CAATCCACACAAAAAATGTC+AGG | + | chr8_4:23695822-23695841 | None:intergenic | 35.0% | |
| !!! | CTGACATTTTTTGTGTGGAT+TGG | - | chr8_4:23695820-23695839 | Msa1319800:five_prime_UTR | 35.0% |
| !!! | TTTTTGTGTGGATTGGCATT+TGG | - | chr8_4:23695827-23695846 | Msa1319800:five_prime_UTR | 35.0% |
| CATACCTGCTTAGGAATATA+GGG | - | chr8_4:23695850-23695869 | Msa1319800:five_prime_UTR | 35.0% | |
| AAATCCCTATATTCCTAAGC+AGG | + | chr8_4:23695857-23695876 | None:intergenic | 35.0% | |
| CTAACAGTGAGAGATGAAAG+GGG | + | chr8_4:23693016-23693035 | None:intergenic | 40.0% | |
| CTCTAACAGTGAGAGATGAA+AGG | + | chr8_4:23693018-23693037 | None:intergenic | 40.0% | |
| ATTCGATCCTTTCTCTCTCT+AGG | - | chr8_4:23693055-23693074 | Msa1319800:three_prime_UTR | 40.0% | |
| TTCGATCCTTTCTCTCTCTA+GGG | - | chr8_4:23693056-23693075 | Msa1319800:three_prime_UTR | 40.0% | |
| !!! | CTTTCTCTCTCTAGGGTTTT+GGG | - | chr8_4:23693063-23693082 | Msa1319800:three_prime_UTR | 40.0% |
| !!! | TTTCTCTCTCTAGGGTTTTG+GGG | - | chr8_4:23693064-23693083 | Msa1319800:three_prime_UTR | 40.0% |
| ! | GCGTATAGACTTTTGTGTTG+TGG | - | chr8_4:23693830-23693849 | Msa1319800:intron | 40.0% |
| AATGGTTGAAACATGCAGAG+GGG | - | chr8_4:23694132-23694151 | Msa1319800:intron | 40.0% | |
| CCAAGAAAGCAATCCTTTCA+TGG | + | chr8_4:23694331-23694350 | None:intergenic | 40.0% | |
| CCATGAAAGGATTGCTTTCT+TGG | - | chr8_4:23694328-23694347 | Msa1319800:intron | 40.0% | |
| GAACCAACTTGATTAAGGAG+AGG | - | chr8_4:23694355-23694374 | Msa1319800:intron | 40.0% | |
| AGGCCTGAAATGTTCATGAA+AGG | - | chr8_4:23694375-23694394 | Msa1319800:intron | 40.0% | |
| ! | CTAATGATGCATGATTTGGG+TGG | + | chr8_4:23694430-23694449 | None:intergenic | 40.0% |
| ! | ACCCATGGAAGGTTTTTATG+TGG | - | chr8_4:23694635-23694654 | Msa1319800:intron | 40.0% |
| GACCACATAAAAACCTTCCA+TGG | + | chr8_4:23694640-23694659 | None:intergenic | 40.0% | |
| AAGGAATGGCCTCATTAATC+CGG | - | chr8_4:23694712-23694731 | Msa1319800:intron | 40.0% | |
| AGAGTCCTATCGTTTCTATG+CGG | - | chr8_4:23694776-23694795 | Msa1319800:intron | 40.0% | |
| GTATCAGAGCCTAATGTTTC+GGG | + | chr8_4:23694877-23694896 | None:intergenic | 40.0% | |
| GGTATCAGAGCCTAATGTTT+CGG | + | chr8_4:23694878-23694897 | None:intergenic | 40.0% | |
| GTTAACTAGAGGCAGTTACA+AGG | + | chr8_4:23695027-23695046 | None:intergenic | 40.0% | |
| GACATGTGTCAGTTAACTAG+AGG | + | chr8_4:23695038-23695057 | None:intergenic | 40.0% | |
| TTCTGGTGTGATACACCTTA+TGG | - | chr8_4:23695133-23695152 | Msa1319800:intron | 40.0% | |
| CCCAATCACAATCATTCACA+AGG | + | chr8_4:23695333-23695352 | None:intergenic | 40.0% | |
| AATCCTTGTAGTCATGGTGA+AGG | - | chr8_4:23695473-23695492 | Msa1319800:intron | 40.0% | |
| GGATCTTCATCTTTGACTGT+TGG | - | chr8_4:23695712-23695731 | Msa1319800:intron | 40.0% | |
| GACACCAATTGAATTGAAGC+AGG | - | chr8_4:23695745-23695764 | Msa1319800:exon | 40.0% | |
| !!! | AGGACCTGACATTTTTTGTG+TGG | - | chr8_4:23695815-23695834 | Msa1319800:five_prime_UTR | 40.0% |
| GCATACCTGCTTAGGAATAT+AGG | - | chr8_4:23695849-23695868 | Msa1319800:five_prime_UTR | 40.0% | |
| CCAAAACCCTAGAGAGAGAA+AGG | + | chr8_4:23693065-23693084 | None:intergenic | 45.0% | |
| !!! | CCTTTCTCTCTCTAGGGTTT+TGG | - | chr8_4:23693062-23693081 | Msa1319800:three_prime_UTR | 45.0% |
| ! | TGATTGCCTAGTTGGTTCAC+CGG | - | chr8_4:23693417-23693436 | Msa1319800:three_prime_UTR | 45.0% |
| AATGAACCGGTGAACCAACT+AGG | + | chr8_4:23693426-23693445 | None:intergenic | 45.0% | |
| !! | AGTTGGTTCACCGGTTCATT+TGG | - | chr8_4:23693426-23693445 | Msa1319800:exon | 45.0% |
| TGGTCAAACCTATGAAGCAC+AGG | - | chr8_4:23693446-23693465 | Msa1319800:CDS | 45.0% | |
| AAACCTATGAAGCACAGGCA+TGG | - | chr8_4:23693451-23693470 | Msa1319800:CDS | 45.0% | |
| ! | GTAGTTACATGTGTCGGTGT+TGG | - | chr8_4:23693533-23693552 | Msa1319800:CDS | 45.0% |
| TATGAAGCACGGACACTTCT+CGG | + | chr8_4:23693572-23693591 | None:intergenic | 45.0% | |
| !! | AGAAGTGTCCGTGCTTCATA+GGG | - | chr8_4:23693572-23693591 | Msa1319800:intron | 45.0% |
| GCACATACACTCCTCAGATT+AGG | - | chr8_4:23693622-23693641 | Msa1319800:intron | 45.0% | |
| ACGGATACACACCTAATCTG+AGG | + | chr8_4:23693636-23693655 | None:intergenic | 45.0% | |
| GATTAGGTGTGTATCCGTGT+CGG | - | chr8_4:23693638-23693657 | Msa1319800:intron | 45.0% | |
| TTCTCTGTGTCGTGTTGTGT+CGG | + | chr8_4:23693681-23693700 | None:intergenic | 45.0% | |
| TGTATGTGTCCGTGCTTCAT+AGG | - | chr8_4:23693777-23693796 | Msa1319800:intron | 45.0% | |
| CGAACAACACCTATGAAGCA+CGG | + | chr8_4:23693789-23693808 | None:intergenic | 45.0% | |
| ATGGTTGAAACATGCAGAGG+GGG | - | chr8_4:23694133-23694152 | Msa1319800:intron | 45.0% | |
| GGTGCGAACCAACTTGATTA+AGG | - | chr8_4:23694350-23694369 | Msa1319800:intron | 45.0% | |
| AGGCCTCTCCTTAATCAAGT+TGG | + | chr8_4:23694361-23694380 | None:intergenic | 45.0% | |
| ATGTTCCTCAGTAACACCCA+TGG | - | chr8_4:23694620-23694639 | Msa1319800:intron | 45.0% | |
| CCTTACAAGCCGGATTAATG+AGG | + | chr8_4:23694724-23694743 | None:intergenic | 45.0% | |
| ! | CCTCATTAATCCGGCTTGTA+AGG | - | chr8_4:23694721-23694740 | Msa1319800:intron | 45.0% |
| ! | TAATCCGGCTTGTAAGGTGA+AGG | - | chr8_4:23694727-23694746 | Msa1319800:intron | 45.0% |
| ! | AATCCGGCTTGTAAGGTGAA+GGG | - | chr8_4:23694728-23694747 | Msa1319800:intron | 45.0% |
| GAGTCCTATCGTTTCTATGC+GGG | - | chr8_4:23694777-23694796 | Msa1319800:intron | 45.0% | |
| AAGTCCCGCATAGAAACGAT+AGG | + | chr8_4:23694784-23694803 | None:intergenic | 45.0% | |
| TATCGTTTCTATGCGGGACT+TGG | - | chr8_4:23694783-23694802 | Msa1319800:intron | 45.0% | |
| ATCGTTTCTATGCGGGACTT+GGG | - | chr8_4:23694784-23694803 | Msa1319800:intron | 45.0% | |
| TGGTGCGCGTATATAAATGG+TGG | - | chr8_4:23694847-23694866 | Msa1319800:intron | 45.0% | |
| GGTGCGCGTATATAAATGGT+GGG | - | chr8_4:23694848-23694867 | Msa1319800:intron | 45.0% | |
| TGGCAAACGTCAGTCATCTA+GGG | + | chr8_4:23695071-23695090 | None:intergenic | 45.0% | |
| ! | ACCACTCTAACTGACTCAAC+TGG | + | chr8_4:23695091-23695110 | None:intergenic | 45.0% |
| GATTGTGATTGGGAGCTAAG+CGG | - | chr8_4:23695340-23695359 | Msa1319800:intron | 45.0% | |
| TAGAAGCTAACCACCATGCA+AGG | + | chr8_4:23695416-23695435 | None:intergenic | 45.0% | |
| TAGCCTTCACCATGACTACA+AGG | + | chr8_4:23695479-23695498 | None:intergenic | 45.0% | |
| TGTCCATGCCTGTGCTTCAT+AGG | + | chr8_4:23693457-23693476 | None:intergenic | 50.0% | |
| !! | GAGAAGTGTCCGTGCTTCAT+AGG | - | chr8_4:23693571-23693590 | Msa1319800:intron | 50.0% |
| !! | ATTGGTGTCAGCGTCATGTC+TGG | - | chr8_4:23693754-23693773 | Msa1319800:intron | 50.0% |
| TGAAACATGCAGAGGGGGTT+TGG | - | chr8_4:23694138-23694157 | Msa1319800:intron | 50.0% | |
| TCCTCAGTAACACCCATGGA+AGG | - | chr8_4:23694624-23694643 | Msa1319800:intron | 50.0% | |
| !! | ACCTTCCATGGGTGTTACTG+AGG | + | chr8_4:23694628-23694647 | None:intergenic | 50.0% |
| GCGTGGTGCGCGTATATAAA+TGG | - | chr8_4:23694844-23694863 | Msa1319800:intron | 50.0% | |
| ! | GCGCGTATATAAATGGTGGG+TGG | - | chr8_4:23694851-23694870 | Msa1319800:intron | 50.0% |
| CTGGCAAACGTCAGTCATCT+AGG | + | chr8_4:23695072-23695091 | None:intergenic | 50.0% | |
| GCCAGTTGAGTCAGTTAGAG+TGG | - | chr8_4:23695087-23695106 | Msa1319800:intron | 50.0% | |
| GGTTTGTCTTGCAGTAGACC+TGG | - | chr8_4:23695298-23695317 | Msa1319800:intron | 50.0% | |
| TTCACAAGGACGAGAACTCC+AGG | + | chr8_4:23695319-23695338 | None:intergenic | 50.0% | |
| CGGTCAACTGAGTACTACAC+TGG | - | chr8_4:23695360-23695379 | Msa1319800:intron | 50.0% | |
| GGCATTTGGCATACCTGCTT+AGG | - | chr8_4:23695841-23695860 | Msa1319800:five_prime_UTR | 50.0% | |
| TGAAGCACAGGCATGGACAC+CGG | - | chr8_4:23693458-23693477 | Msa1319800:CDS | 55.0% | |
| CAGTGTCAGCGTGTCATGTC+CGG | + | chr8_4:23693480-23693499 | None:intergenic | 55.0% | |
| GCACGGACACTTCTCGGATT+AGG | + | chr8_4:23693566-23693585 | None:intergenic | 55.0% | |
| GTGTATCCGTGTCGGACATG+CGG | - | chr8_4:23693646-23693665 | Msa1319800:intron | 55.0% | |
| ! | GTGTCGTGTTGTGTCGGTGT+CGG | + | chr8_4:23693675-23693694 | None:intergenic | 55.0% |
| GCACCCTTCACCTTACAAGC+CGG | + | chr8_4:23694734-23694753 | None:intergenic | 55.0% | |
| GCACCACGCCCAATAGTGCT+GGG | + | chr8_4:23694833-23694852 | None:intergenic | 60.0% | |
| GGTGGGTGGCCCGAAACATT+AGG | - | chr8_4:23694865-23694884 | Msa1319800:intron | 60.0% | |
| CGGACACCGCATGTCCGACA+CGG | + | chr8_4:23693655-23693674 | None:intergenic | 65.0% | |
| ! | CTGGGCGTGGGGGGTGTATT+GGG | + | chr8_4:23694815-23694834 | None:intergenic | 65.0% |
| ! | CCAATAGTGCTGGGCGTGGG+GGG | + | chr8_4:23694824-23694843 | None:intergenic | 65.0% |
| ! | CCCAATAGTGCTGGGCGTGG+GGG | + | chr8_4:23694825-23694844 | None:intergenic | 65.0% |
| CCCCCACGCCCAGCACTATT+GGG | - | chr8_4:23694822-23694841 | Msa1319800:intron | 65.0% | |
| ! | GCCCAATAGTGCTGGGCGTG+GGG | + | chr8_4:23694826-23694845 | None:intergenic | 65.0% |
| ! | CGCCCAATAGTGCTGGGCGT+GGG | + | chr8_4:23694827-23694846 | None:intergenic | 65.0% |
| ! | ACGCCCAATAGTGCTGGGCG+TGG | + | chr8_4:23694828-23694847 | None:intergenic | 65.0% |
| ACGCCCAGCACTATTGGGCG+TGG | - | chr8_4:23694827-23694846 | Msa1319800:intron | 65.0% | |
| CGCACCACGCCCAATAGTGC+TGG | + | chr8_4:23694834-23694853 | None:intergenic | 65.0% | |
| ! | GCTGGGCGTGGGGGGTGTAT+TGG | + | chr8_4:23694816-23694835 | None:intergenic | 70.0% |
| CCCCCCACGCCCAGCACTAT+TGG | - | chr8_4:23694821-23694840 | Msa1319800:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 23692963 | 23695905 | 23692963 | ID=Msa1319800;Name=Msa1319800 |
| chr8_4 | mRNA | 23692963 | 23695905 | 23692963 | ID=Msa1319800-mRNA-1;Parent=Msa1319800;Name=Msa1319800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=150|1|1|1|0.66|0.5|4|476|101 |
| chr8_4 | exon | 23692963 | 23693556 | 23692963 | ID=Msa1319800-mRNA-1:exon:8228;Parent=Msa1319800-mRNA-1 |
| chr8_4 | exon | 23694462 | 23694544 | 23694462 | ID=Msa1319800-mRNA-1:exon:8227;Parent=Msa1319800-mRNA-1 |
| chr8_4 | exon | 23694637 | 23694718 | 23694637 | ID=Msa1319800-mRNA-1:exon:8226;Parent=Msa1319800-mRNA-1 |
| chr8_4 | exon | 23695733 | 23695905 | 23695733 | ID=Msa1319800-mRNA-1:exon:8225;Parent=Msa1319800-mRNA-1 |
| chr8_4 | five_prime_UTR | 23695756 | 23695905 | 23695756 | ID=Msa1319800-mRNA-1:five_prime_utr;Parent=Msa1319800-mRNA-1 |
| chr8_4 | CDS | 23695733 | 23695755 | 23695733 | ID=Msa1319800-mRNA-1:cds;Parent=Msa1319800-mRNA-1 |
| chr8_4 | CDS | 23694637 | 23694718 | 23694637 | ID=Msa1319800-mRNA-1:cds;Parent=Msa1319800-mRNA-1 |
| chr8_4 | CDS | 23694462 | 23694544 | 23694462 | ID=Msa1319800-mRNA-1:cds;Parent=Msa1319800-mRNA-1 |
| chr8_4 | CDS | 23693439 | 23693556 | 23693439 | ID=Msa1319800-mRNA-1:cds;Parent=Msa1319800-mRNA-1 |
| chr8_4 | three_prime_UTR | 23692963 | 23693438 | 23692963 | ID=Msa1319800-mRNA-1:three_prime_utr;Parent=Msa1319800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
