AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0654310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654310 MtrunA17_Chr4g0048931 94.878 1230 62 1 1 1229 1 1230 0.0 2311
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654310 AT1G61690.1 47.045 1286 508 37 1 1228 1 1171 0.0 907
Msa0654310 AT1G20110.1 44.262 61 31 2 16 73 450 510 6.80e-11 67.0

Find 273 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTGCGTCAAGAAATTT+TGG 0.135004 4_3:-62491115 Msa0654310:CDS
CTTCTTTACGAGGGAATAAT+TGG 0.166408 4_3:-62495736 Msa0654310:CDS
CAGTTGGGCTTCCAGATTCT+TGG 0.186211 4_3:+62491626 None:intergenic
GGCCATCTCTCCGTAGCTTT+AGG 0.215556 4_3:+62490833 None:intergenic
GCCATCTCTCCGTAGCTTTA+GGG 0.246953 4_3:+62490834 None:intergenic
TATCTTGGCTTCCAATGTTT+TGG 0.251942 4_3:+62491998 None:intergenic
TTTGTCAAAGGTTTGAGATT+TGG 0.253265 4_3:+62492793 None:intergenic
GTACTAGTAGCTTCCTTAAC+AGG 0.257183 4_3:+62491768 None:intergenic
TTGGTTAGGGTTCTCGATTT+TGG 0.275780 4_3:+62490585 None:intergenic
GAAATTCTCAACCAGATTCT+TGG 0.290064 4_3:-62493793 Msa0654310:CDS
AATTCAATGCTTACTAATCT+AGG 0.296937 4_3:-62491834 Msa0654310:CDS
AGCTGGTGCTTTGGAATCAC+TGG 0.301108 4_3:-62492843 Msa0654310:CDS
CCCTCTCTTAAAAGCTTTCA+AGG 0.313296 4_3:+62493501 None:intergenic
GCCATTTCTGATAATCTTGA+TGG 0.313917 4_3:-62492908 Msa0654310:CDS
CTGAATTCATTGTTAACATC+TGG 0.325263 4_3:-62490439 Msa0654310:CDS
TGCTCATGATCATGCAGATT+TGG 0.328715 4_3:+62492956 None:intergenic
ATCCACCGCATCTGACTTAT+CGG 0.329738 4_3:+62490732 None:intergenic
ACAAAACGAGTGCACGATTC+CGG 0.339098 4_3:+62495911 None:intergenic
GATGCTCATCATGTGCAAAA+TGG 0.344797 4_3:+62491502 None:intergenic
AATCGCCTCATTTAAAATAA+AGG 0.344828 4_3:+62490160 None:intergenic
CCCTGAGTTAGCTGGTGCTT+TGG 0.345146 4_3:-62492852 Msa0654310:CDS
TCATCAACTGCCACATCAAC+TGG 0.345429 4_3:+62491906 None:intergenic
AAAGTCAGCAAACTTGAGTT+TGG 0.346435 4_3:-62493251 Msa0654310:CDS
AACGGCTTTGCAGCAGCATT+CGG 0.347511 4_3:+62490913 None:intergenic
ACGGCTTTGCAGCAGCATTC+GGG 0.356227 4_3:+62490914 None:intergenic
AGCAATGGCGATATTGAAAA+AGG 0.361303 4_3:-62492696 Msa0654310:CDS
TTGCGACAGGGACGCAGGGC+TGG 0.361700 4_3:-62493986 Msa0654310:CDS
AGCGGGTCCTACTATTCCTT+TGG 0.366228 4_3:-62491280 Msa0654310:CDS
AGAGCTGGGATGGTCTGATT+TGG 0.366288 4_3:-62493293 Msa0654310:CDS
CAATCATCATCGACGAATAC+TGG 0.374392 4_3:-62492374 Msa0654310:CDS
AACTGAAACAACGAATAGTA+TGG 0.379012 4_3:-62493626 Msa0654310:CDS
AGCATCCATCTCTTCTATCT+TGG 0.379511 4_3:+62491983 None:intergenic
TCTTTCACTCCTTACGGACT+TGG 0.380081 4_3:-62492261 Msa0654310:CDS
CATATGCCAGATCTACTTAC+TGG 0.381048 4_3:-62491381 Msa0654310:CDS
TGCAGAGGAAGTCCTTAAAA+TGG 0.381959 4_3:-62492021 Msa0654310:CDS
AGTTTGAGTTCTGAAATTAC+TGG 0.385842 4_3:-62492590 Msa0654310:CDS
AAAACTATCAGCTTGAATAA+AGG 0.385999 4_3:+62490372 None:intergenic
TGCAAAAGTTTCTGCAATCA+AGG 0.386217 4_3:+62493213 None:intergenic
GCACTCACCTCAGCAGATAA+TGG 0.391318 4_3:+62491480 None:intergenic
ATCACTCGTCGTGCAAGAAC+CGG 0.392721 4_3:-62495930 Msa0654310:five_prime_UTR
GTTCTTCCAGTTGCTTCTCT+AGG 0.393214 4_3:+62493062 None:intergenic
CGTTGATGCCTCTAATTGCC+AGG 0.394991 4_3:-62495711 Msa0654310:CDS
ATTGAGAAGGGAAGGGAAAA+TGG 0.395881 4_3:-62492471 Msa0654310:CDS
TCAGCAACAAGTCCTTGTTT+TGG 0.397436 4_3:+62491589 None:intergenic
GGCTCTCAAAATCTTCCAGT+TGG 0.398361 4_3:+62491610 None:intergenic
GAAGAACAGGAACTCCTTGC+TGG 0.401130 4_3:-62493046 Msa0654310:CDS
TGATGTGTTGGAAACATTGC+TGG 0.402289 4_3:+62490963 None:intergenic
TGAGAGGCAAGCAGATGCTT+TGG 0.402822 4_3:-62493470 Msa0654310:CDS
ACCATCAAGATTATCAGAAA+TGG 0.406595 4_3:+62492907 None:intergenic
TTGCTGGTGGAGGCAGTGTT+TGG 0.406928 4_3:+62490979 None:intergenic
CTCAGAAAAGTATCATCAAC+TGG 0.408151 4_3:+62492164 None:intergenic
CAAGTGAAAATCTCACAAAA+AGG 0.409098 4_3:-62491455 Msa0654310:CDS
GCTCTCAAAATCTTCCAGTT+GGG 0.415509 4_3:+62491611 None:intergenic
TGCAAAGACAGGTGAAGAAA+AGG 0.415846 4_3:-62493194 Msa0654310:CDS
ACATTTGACTGGTTTGTGTT+TGG 0.416861 4_3:+62491168 None:intergenic
AGAATTTCATCTTCATCTCT+AGG 0.417922 4_3:+62493808 None:intergenic
AGAGAAGCAACTGGAAGAAC+AGG 0.422268 4_3:-62493059 Msa0654310:CDS
CAAGAATCTGGAAGCCCAAC+TGG 0.425253 4_3:-62491625 Msa0654310:CDS
AAGTCAATGCTGCTACTTCA+AGG 0.427028 4_3:-62490406 Msa0654310:three_prime_UTR
CTAGTACTGTCACAACTTCA+AGG 0.427339 4_3:-62491752 Msa0654310:CDS
TTCCCTCGTAAAGAAGGCTT+TGG 0.427802 4_3:+62495743 None:intergenic
ACGCAAAGCCATTCTTTGTT+GGG 0.429998 4_3:+62494078 None:intergenic
AGTGACCGATGAGGATTTGA+TGG 0.430553 4_3:-62492876 Msa0654310:CDS
TGCGACAGGGACGCAGGGCT+GGG 0.431204 4_3:-62493985 Msa0654310:CDS
TACTTCAGAACTTCAAGAGC+TGG 0.434040 4_3:-62493308 Msa0654310:CDS
CACGCAAAGCCATTCTTTGT+TGG 0.435300 4_3:+62494077 None:intergenic
AAGAATGGCTTTGCGTGGAC+AGG 0.438151 4_3:-62494071 Msa0654310:CDS
TGTGCAAAATGGGAGTTTGC+AGG 0.440792 4_3:+62491513 None:intergenic
TGTTCCAGATTATGCTTCTC+AGG 0.442874 4_3:-62491145 Msa0654310:CDS
TGAAGCGCAGTTGGAGGAGT+TGG 0.444540 4_3:-62490767 Msa0654310:CDS
TGACCGTTTCAAGTTGCAAC+AGG 0.444966 4_3:-62490881 Msa0654310:CDS
CAACCTCAGTCTTGTCAATC+CGG 0.445432 4_3:+62493167 None:intergenic
GGCCTGTCGAAGTTCGTCCC+TGG 0.446077 4_3:+62491041 None:intergenic
CAATTATTCCCTCGTAAAGA+AGG 0.446224 4_3:+62495737 None:intergenic
TTAGAGAAGAGGTTGGAGGA+TGG 0.449154 4_3:-62491012 Msa0654310:CDS
GCGGTTAGTTTGAAACGATC+AGG 0.449589 4_3:-62490517 Msa0654310:CDS
GCTCTCTTTGAATCATCAAC+CGG 0.451246 4_3:+62492522 None:intergenic
AGCATATCTTTCACTCCTTA+CGG 0.451437 4_3:-62492267 Msa0654310:CDS
CCATTACCAGTAAGTAGATC+TGG 0.452648 4_3:+62491375 None:intergenic
AAAGACATTTCTGTTGAGTC+TGG 0.453344 4_3:-62493379 Msa0654310:CDS
TCGTCCTGAGAAGCATAATC+TGG 0.454913 4_3:+62491141 None:intergenic
TTGAACAACATTTGATGTGT+TGG 0.459609 4_3:+62490951 None:intergenic
GCCTCTTCTAGCTTCTTACA+AGG 0.464066 4_3:+62494022 None:intergenic
AAAGGAAGGCACTTGCTTTG+AGG 0.464115 4_3:-62491692 Msa0654310:CDS
TTATCTGCTCTGAAAGCTAC+TGG 0.464175 4_3:-62490673 Msa0654310:CDS
GAGAACTCTTAGCGTTGAAA+AGG 0.464290 4_3:-62491710 Msa0654310:CDS
GGAACAACCCTGGCAATTAG+AGG 0.465260 4_3:+62495703 None:intergenic
GTAAGCATTGAATTCAATGC+TGG 0.472004 4_3:+62491843 None:intergenic
ATTGCTCATAGCTCCTCAAC+TGG 0.473098 4_3:-62491414 Msa0654310:CDS
TCCCTTCCCGTCTTAAAGCA+AGG 0.473525 4_3:+62492054 None:intergenic
GTTACGTCAGCAAGCTTTAG+CGG 0.475113 4_3:-62493572 Msa0654310:CDS
AATCTGGAACAACATTTGAC+TGG 0.475130 4_3:+62491157 None:intergenic
CCAGATCTACTTACTGGTAA+TGG 0.475511 4_3:-62491375 Msa0654310:CDS
AAATTTCTTGACGCAAAGAA+AGG 0.475848 4_3:+62491118 None:intergenic
CAGAAGATGTTAGCGAAGAT+CGG 0.476728 4_3:-62495773 Msa0654310:exon
AGCAGAAGCTGAGTTAGAAC+GGG 0.476768 4_3:-62490800 Msa0654310:CDS
CAGCTTCTGCTTCCTCTGTT+CGG 0.477351 4_3:+62490812 None:intergenic
GTTAACCTTGCGATTGATGA+AGG 0.479727 4_3:+62495670 None:intergenic
CCCTTCCCGTCTTAAAGCAA+GGG 0.482007 4_3:+62492055 None:intergenic
GCTTGCTGACGTAACTCATC+AGG 0.482310 4_3:+62493580 None:intergenic
TCAGAGCAGATAAGAGTTGA+GGG 0.485201 4_3:+62490683 None:intergenic
ACTCCTGTTGCAACTTGAAA+CGG 0.485424 4_3:+62490878 None:intergenic
CATAAAAGAAGAACCTGTTA+AGG 0.489001 4_3:-62491781 Msa0654310:CDS
GGATTGTTCGAAGATTTAGA+AGG 0.489464 4_3:+62492215 None:intergenic
GCATCTTCTTCAAGTACTAC+AGG 0.490304 4_3:-62493691 Msa0654310:CDS
GGCACTTGCTTTGAGGCGCA+AGG 0.490504 4_3:-62491685 Msa0654310:CDS
CCTCGTAAAGAAGGCTTTGG+TGG 0.490657 4_3:+62495746 None:intergenic
GCAAAGACAGGTGAAGAAAA+GGG 0.490919 4_3:-62493193 Msa0654310:CDS
CAGGGACGCAGGGCTGGGAG+AGG 0.492123 4_3:-62493980 Msa0654310:intron
TGAATTCATTGTTAACATCT+GGG 0.492329 4_3:-62490438 Msa0654310:CDS
TGAATGTTGTATCATATGTT+TGG 0.492344 4_3:-62490186 Msa0654310:three_prime_UTR
GAGGAGTCCAAAGGAATAGT+AGG 0.493103 4_3:+62491273 None:intergenic
CTTTCACTCCTTACGGACTT+GGG 0.493296 4_3:-62492260 Msa0654310:CDS
AGCACGATTTGAGTTGCGAC+AGG 0.494331 4_3:-62493999 Msa0654310:CDS
AGGAAAACAAGCTGAAGCCT+TGG 0.495773 4_3:-62490497 Msa0654310:CDS
AAACGGTCACGACTAGTAAA+CGG 0.495896 4_3:+62490895 None:intergenic
TTCTTTACGAGGGAATAATT+GGG 0.496857 4_3:-62495735 Msa0654310:CDS
AGAAGGTTCTTGCATTGAGA+AGG 0.498127 4_3:-62492484 Msa0654310:CDS
ATGCAGCGCTAACTGATCTC+TGG 0.498371 4_3:+62493710 None:intergenic
CACTCCTTACGGACTTGGGT+TGG 0.500597 4_3:-62492256 Msa0654310:CDS
TAAGCTTGCAGAAGCTAAAG+AGG 0.501280 4_3:-62493104 Msa0654310:CDS
TCATCTGAAAATTGTAAATG+TGG 0.502699 4_3:-62490227 Msa0654310:three_prime_UTR
GTGCTTTGGAATCACTGGGT+TGG 0.504177 4_3:-62492838 Msa0654310:CDS
AGAAGATGTTAGCGAAGATC+GGG 0.504948 4_3:-62495772 Msa0654310:exon
GAAGAATAATGTACAGGTTG+AGG 0.507140 4_3:-62491958 Msa0654310:CDS
GGCAATTGAAGCGCAGTTGG+AGG 0.509228 4_3:-62490773 Msa0654310:CDS
TGAGCATCAGCTGATGGAGA+TGG 0.510663 4_3:-62492411 Msa0654310:CDS
CAACCTCTTCTCTAACAGCT+TGG 0.511169 4_3:+62491020 None:intergenic
GCCACTACGACCTTTGTCAC+TGG 0.511282 4_3:+62493732 None:intergenic
ATGCTCATCATGTGCAAAAT+GGG 0.511451 4_3:+62491503 None:intergenic
TATAAAATTCTGAAAGGAGA+CGG 0.512824 4_3:-62493538 Msa0654310:CDS
TGAAAATTGAAACTATTGAA+TGG 0.513382 4_3:+62490247 None:intergenic
TCCAAAGCACCAGCTAACTC+AGG 0.514575 4_3:+62492851 None:intergenic
AAGCAGAAGCTGAGTTAGAA+CGG 0.518122 4_3:-62490801 Msa0654310:CDS
CAGAACTTCAAGAGCTGGGA+TGG 0.518671 4_3:-62493303 Msa0654310:CDS
CCTTAAAATGGCCAAAACAT+TGG 0.518990 4_3:-62492009 Msa0654310:CDS
TTGAGTTGCGACAGGGACGC+AGG 0.519807 4_3:-62493991 Msa0654310:CDS
TAGCAACGCTTCTTTGTCAA+AGG 0.522640 4_3:+62492781 None:intergenic
AGCCAGGGACGAACTTCGAC+AGG 0.523706 4_3:-62491043 Msa0654310:CDS
TTTAAGACGGGAAGGGAAAA+CGG 0.523794 4_3:-62492048 Msa0654310:CDS
TCCTCAGACTGGTAAAGATA+AGG 0.524696 4_3:-62493338 Msa0654310:CDS
AAGTTGTACCCAACAAAGAA+TGG 0.524769 4_3:-62494086 Msa0654310:CDS
AGAGAGGGAAGGAGCTTGAG+AGG 0.525287 4_3:-62493486 Msa0654310:CDS
GAAAGTGACTTAAACAACAC+TGG 0.526972 4_3:-62492662 Msa0654310:CDS
TTGATGGACCCTGAGTTAGC+TGG 0.527871 4_3:-62492860 Msa0654310:CDS
AAAGGCCCTTGCTTTAAGAC+GGG 0.530144 4_3:-62492060 Msa0654310:CDS
GAATACAAATGTCATCTGAA+TGG 0.530151 4_3:+62490108 None:intergenic
TGTTTCTGCTGTAGTAGAAG+AGG 0.530908 4_3:+62495842 None:intergenic
GTCAGCAAACTTGAGTTTGG+AGG 0.531192 4_3:-62493248 Msa0654310:CDS
GCTGGTGCTTTGGAATCACT+GGG 0.535449 4_3:-62492842 Msa0654310:CDS
GGCACGTCGAAGAGCATCCA+AGG 0.535888 4_3:+62490480 None:intergenic
AAGGAAAACTAACAGAAGCC+AGG 0.536128 4_3:-62491059 Msa0654310:CDS
TTCAGAGCAGATAAGAGTTG+AGG 0.537619 4_3:+62490682 None:intergenic
CAGCACCACTGTAGAAGGTG+TGG 0.537683 4_3:-62494124 Msa0654310:CDS
ATGTGGCAGTTGATGAAGAA+AGG 0.539322 4_3:-62491899 Msa0654310:CDS
ATAAAATTCTGAAAGGAGAC+GGG 0.540491 4_3:-62493537 Msa0654310:CDS
AAATAATAATGCCGCTTCCA+CGG 0.543317 4_3:-62492558 Msa0654310:CDS
AAAGTAAAGCAGAAATTCAG+AGG 0.543735 4_3:-62492103 Msa0654310:CDS
AACGTCAAGCCCTAAAGCTA+CGG 0.544391 4_3:-62490843 Msa0654310:CDS
GAAAGGCCCTTGCTTTAAGA+CGG 0.545586 4_3:-62492061 Msa0654310:CDS
ACTTCAGAACTTCAAGAGCT+GGG 0.547171 4_3:-62493307 Msa0654310:CDS
GGGAGAAATAGAAGAGGCTG+AGG 0.548311 4_3:-62491664 Msa0654310:CDS
TGAATTGAGCGGAACAACCC+TGG 0.551547 4_3:+62495693 None:intergenic
GAATAGTATGGCTGTTGATG+TGG 0.551719 4_3:-62493614 Msa0654310:CDS
GAAGGTTCTTGCATTGAGAA+GGG 0.551906 4_3:-62492483 Msa0654310:CDS
GACTTCTACTCGCTGCATGC+AGG 0.553919 4_3:+62492345 None:intergenic
GCCCTTGCTTTAAGACGGGA+AGG 0.554192 4_3:-62492056 Msa0654310:CDS
CAAGGTTCACATATACGTAC+AGG 0.556070 4_3:+62494040 None:intergenic
GTAAGGAGTGAAAGATATGC+TGG 0.556679 4_3:+62492269 None:intergenic
GCAGTTGCTTTGAAAAGAGA+AGG 0.558654 4_3:-62491078 Msa0654310:CDS
GTTCTTGCATTGAGAAGGGA+AGG 0.558660 4_3:-62492479 Msa0654310:CDS
AGCTGAGTTAGAACGGGCAA+AGG 0.559624 4_3:-62490794 Msa0654310:CDS
AATCTAGGATGGAAGGATGA+AGG 0.560283 4_3:-62491819 Msa0654310:CDS
AAAGGCAATTGAAGCGCAGT+TGG 0.560739 4_3:-62490776 Msa0654310:CDS
TTCAGTTAATTCATCTCAAG+CGG 0.560902 4_3:-62491298 Msa0654310:CDS
CTTGTTGCTGAATGCATCCA+AGG 0.561407 4_3:-62491577 Msa0654310:CDS
GCTTACTAATCTAGGATGGA+AGG 0.561754 4_3:-62491826 Msa0654310:CDS
GCCCTAAAGCTACGGAGAGA+TGG 0.561928 4_3:-62490835 Msa0654310:CDS
AGCACCACTGTAGAAGGTGT+GGG 0.564062 4_3:-62494123 Msa0654310:CDS
CTTCAATTCTCCAGTTGATG+TGG 0.564266 4_3:-62491916 Msa0654310:CDS
CCACCAAAGCCTTCTTTACG+AGG 0.565763 4_3:-62495746 Msa0654310:CDS
GGACATGGTTGTTTCAGAAG+AGG 0.567833 4_3:-62491877 Msa0654310:CDS
TTCAGCTAAGGAAAGCGGCT+CGG 0.568308 4_3:-62493444 Msa0654310:CDS
GGCTCTAACGTTGAAGCGTG+AGG 0.568601 4_3:-62493128 Msa0654310:CDS
AGGGAAAACGGAGGATGCAG+AGG 0.569218 4_3:-62492036 Msa0654310:CDS
CATTCCAACCCAAGTCCGTA+AGG 0.571820 4_3:+62492252 None:intergenic
TCAGCAAACTTGAGTTTGGA+GGG 0.572121 4_3:-62493247 Msa0654310:CDS
ACAAAGTCACTTCCTCAGAC+TGG 0.572322 4_3:-62493349 Msa0654310:CDS
CAGGTGAAGAAAAGGGCAGC+CGG 0.572523 4_3:-62493186 Msa0654310:CDS
CCTCTAGTTGAGGAAGGAAG+TGG 0.572860 4_3:-62492323 Msa0654310:CDS
ATGCATAGAGTGGCCAGTTG+AGG 0.573144 4_3:+62491401 None:intergenic
GGAAGCCAAGATAGAAGAGA+TGG 0.573762 4_3:-62491988 Msa0654310:CDS
TGTAAATGTGGTTCTAAACA+TGG 0.576409 4_3:-62490215 Msa0654310:three_prime_UTR
CGGCTTTGCAGCAGCATTCG+GGG 0.576851 4_3:+62490915 None:intergenic
TGCTCTGAAGAATAATGTAC+AGG 0.578058 4_3:-62491964 Msa0654310:CDS
ATCAGCATTAATACGCGGCA+TGG 0.578083 4_3:-62492999 Msa0654310:CDS
ATTCACCTTCATCAATCGCA+AGG 0.579513 4_3:-62495675 Msa0654310:intron
ATGCTTTGGAAATTCAGCTA+AGG 0.580873 4_3:-62493456 Msa0654310:CDS
TTATCATCATATGTCTTCGA+AGG 0.581242 4_3:+62492194 None:intergenic
AGAATGGCTTTGCGTGGACA+GGG 0.583680 4_3:-62494070 Msa0654310:CDS
CAATGCTTACTAATCTAGGA+TGG 0.583962 4_3:-62491830 Msa0654310:CDS
GCTCTTAATCAAAAGCGAGC+AGG 0.584439 4_3:-62492731 Msa0654310:CDS
TAAGCATTGAATTCAATGCT+GGG 0.587214 4_3:+62491844 None:intergenic
TGCCGATAAGTCAGATGCGG+TGG 0.587474 4_3:-62490734 Msa0654310:CDS
AGTAAGTATAAAATTCTGAA+AGG 0.588864 4_3:-62493544 Msa0654310:CDS
AGGCCAAGCTGTTAGAGAAG+AGG 0.593828 4_3:-62491023 Msa0654310:CDS
AGAAGTCCTCTAGTTGAGGA+AGG 0.594048 4_3:-62492329 Msa0654310:CDS
TCCTTATCTTTACCAGTCTG+AGG 0.594057 4_3:+62493337 None:intergenic
CACCAAAGCCTTCTTTACGA+GGG 0.594410 4_3:-62495745 Msa0654310:CDS
GCTGTTAGAGAAGAGGTTGG+AGG 0.596896 4_3:-62491016 Msa0654310:CDS
GTTGATGCCTCTAATTGCCA+GGG 0.598704 4_3:-62495710 Msa0654310:CDS
GAGTAGAAGTCCTCTAGTTG+AGG 0.600375 4_3:-62492333 Msa0654310:CDS
GGAAATTCAGCTAAGGAAAG+CGG 0.600558 4_3:-62493449 Msa0654310:CDS
TCAGTTAATTCATCTCAAGC+GGG 0.600749 4_3:-62491297 Msa0654310:CDS
AGTTCTTGAGCATCAGCTGA+TGG 0.601408 4_3:-62492417 Msa0654310:CDS
TGAGTTGCGACAGGGACGCA+GGG 0.605256 4_3:-62493990 Msa0654310:CDS
GTTCCGTCTGAATCATCTCA+CGG 0.608299 4_3:-62491543 Msa0654310:CDS
AGGTAATACTGAAGAAGCAA+TGG 0.609705 4_3:-62492711 Msa0654310:CDS
GCACTTGCTTTGAGGCGCAA+GGG 0.610522 4_3:-62491684 Msa0654310:CDS
ACTATCAGCTTGAATAAAGG+AGG 0.611918 4_3:+62490375 None:intergenic
CAAGCTGTTAGAGAAGAGGT+TGG 0.612824 4_3:-62491019 Msa0654310:CDS
GTTGGAGGAGTTGGCTGCTG+AGG 0.613394 4_3:-62490758 Msa0654310:CDS
AGGAAAACTAACAGAAGCCA+GGG 0.615723 4_3:-62491058 Msa0654310:CDS
AAGCAATCAACCAGTGACAA+AGG 0.616395 4_3:-62493742 Msa0654310:CDS
GTTGGAAACATTGCTGGTGG+AGG 0.616993 4_3:+62490969 None:intergenic
TGTGGCAGTTGATGAAGAAA+GGG 0.617619 4_3:-62491898 Msa0654310:CDS
CAACAAAGAATGGCTTTGCG+TGG 0.621792 4_3:-62494076 Msa0654310:CDS
GTCACAACTTCAAGGAACAA+AGG 0.622653 4_3:-62491744 Msa0654310:CDS
AAAGTGACTTAAACAACACT+GGG 0.624537 4_3:-62492661 Msa0654310:CDS
ACGTAACTCATCAGGAGTGG+TGG 0.624698 4_3:+62493588 None:intergenic
GCACCACTGTAGAAGGTGTG+GGG 0.625379 4_3:-62494122 Msa0654310:CDS
GCTCTAACGTTGAAGCGTGA+GGG 0.625690 4_3:-62493127 Msa0654310:CDS
AGGGTCCATCAAATCCTCAT+CGG 0.627532 4_3:+62492871 None:intergenic
CCACTTCCTTCCTCAACTAG+AGG 0.628017 4_3:+62492323 None:intergenic
ACGGAGAGATGGCCGAACAG+AGG 0.628540 4_3:-62490824 Msa0654310:CDS
TTTCCGTGAGATGATTCAGA+CGG 0.629170 4_3:+62491540 None:intergenic
AATCTGCATGATCATGAGCA+TGG 0.631390 4_3:-62492953 Msa0654310:CDS
CAGAATCTTCAGCACCAGCA+AGG 0.632957 4_3:+62493032 None:intergenic
ACTCTTAGCGTTGAAAAGGA+AGG 0.636692 4_3:-62491706 Msa0654310:CDS
ACCTTGTAAGAAGCTAGAAG+AGG 0.636754 4_3:-62494023 Msa0654310:CDS
GTTGCCTTCTGGAAACATGT+CGG 0.637060 4_3:-62493413 Msa0654310:CDS
GAAAGGAGACGGGAAATCTG+AGG 0.642954 4_3:-62493527 Msa0654310:CDS
CCAAAGCACCAGCTAACTCA+GGG 0.645234 4_3:+62492852 None:intergenic
ACCAGTGACAAAGGTCGTAG+TGG 0.645600 4_3:-62493733 Msa0654310:CDS
AATTCAGTCATTGAAAAGAG+AGG 0.645693 4_3:-62492753 Msa0654310:CDS
CCCTTGCTTTAAGACGGGAA+GGG 0.647794 4_3:-62492055 Msa0654310:CDS
AATAGTATGGCTGTTGATGT+GGG 0.649232 4_3:-62493613 Msa0654310:CDS
CACCACTGTAGAAGGTGTGG+GGG 0.651612 4_3:-62494121 Msa0654310:CDS
AGATTCACTGAGGAGTCCAA+AGG 0.654296 4_3:+62491264 None:intergenic
TAGTAGAAGAGGATTAACGA+AGG 0.654716 4_3:+62495853 None:intergenic
AAGTAAAGCAGAAATTCAGA+GGG 0.660938 4_3:-62492102 Msa0654310:CDS
GATCTGGCATATGCATAGAG+TGG 0.663140 4_3:+62491391 None:intergenic
GGTGGATGATGTGAGTGTTG+AGG 0.663208 4_3:-62490716 Msa0654310:CDS
CTGACGTAACTCATCAGGAG+TGG 0.672100 4_3:+62493585 None:intergenic
GCACGATTTGAGTTGCGACA+GGG 0.672420 4_3:-62493998 Msa0654310:CDS
TTCTTGCATTGAGAAGGGAA+GGG 0.677335 4_3:-62492478 Msa0654310:CDS
ATATCCGACATGTTTCCAGA+AGG 0.678237 4_3:+62493409 None:intergenic
CCAGATTCTTGGTCAAAACG+AGG 0.680619 4_3:-62493782 Msa0654310:CDS
GCGCAAGGGAGAAATAGAAG+AGG 0.680799 4_3:-62491670 Msa0654310:CDS
TGTGTTGGAAACATTGCTGG+TGG 0.682302 4_3:+62490966 None:intergenic
TTCGTCGATGATGATTGACT+CGG 0.691243 4_3:+62492380 None:intergenic
AAAAGTTTCTGCAATCAAGG+AGG 0.697378 4_3:+62493216 None:intergenic
TAATTTAGAAGTGACCGATG+AGG 0.698604 4_3:-62492885 Msa0654310:CDS
GGATGCCGATAAGTCAGATG+CGG 0.703609 4_3:-62490737 Msa0654310:CDS
ATGAAGCAGAAGAAGAAATG+CGG 0.709038 4_3:-62492448 Msa0654310:CDS
GTCTTGGCTGAGATTCACTG+AGG 0.710997 4_3:+62491254 None:intergenic
AGTTGATGAAGAAAGGGACA+TGG 0.716294 4_3:-62491892 Msa0654310:CDS
TGAGCATCCATTATCTGCTG+AGG 0.716468 4_3:-62491487 Msa0654310:CDS
CAGCCGGATTGACAAGACTG+AGG 0.720198 4_3:-62493170 Msa0654310:CDS
ATTGATGAAGGTGAATTGAG+CGG 0.728556 4_3:+62495682 None:intergenic
GAGCTATCAGCATTAATACG+CGG 0.732772 4_3:-62493004 Msa0654310:CDS
AAGACGGGAAGGGAAAACGG+AGG 0.744098 4_3:-62492045 Msa0654310:CDS
TAATAATGCCGCTTCCACGG+TGG 0.746076 4_3:-62492555 Msa0654310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTAATTTTACAATATTTA+AGG + chr4_3:62491558-62491577 None:intergenic 10.0%
!! TAAATATTGTAAAATTAGTT+AGG - chr4_3:62491558-62491577 Msa0654310:CDS 10.0%
!! TTGATAAAACAATTAAAACT+GGG + chr4_3:62491746-62491765 None:intergenic 15.0%
!! TTTGATAAAACAATTAAAAC+TGG + chr4_3:62491747-62491766 None:intergenic 15.0%
!! CAAAATTCCAAAATTTAATT+GGG + chr4_3:62491922-62491941 None:intergenic 15.0%
!! TCAAAATTCCAAAATTTAAT+TGG + chr4_3:62491923-62491942 None:intergenic 15.0%
!! TAAATGATAGAGAACAATAT+AGG - chr4_3:62490572-62490591 Msa0654310:CDS 20.0%
!! AAAGAACTATAAAGAGAAAA+TGG + chr4_3:62491136-62491155 None:intergenic 20.0%
!!! ACAAAATAGGCTTTTAAATA+AGG + chr4_3:62491205-62491224 None:intergenic 20.0%
!! ACTTATGTAATGAAGAAAAT+AGG + chr4_3:62491409-62491428 None:intergenic 20.0%
!!! TTCATTACATAAGTTTTGTT+TGG - chr4_3:62491415-62491434 Msa0654310:CDS 20.0%
!!! TCTCTTCATTTAATTTTCTA+TGG - chr4_3:62491500-62491519 Msa0654310:CDS 20.0%
!! AAGTGAAAATTGTATAGATT+TGG + chr4_3:62491604-62491623 None:intergenic 20.0%
!! GTTAATTTCATGATTCTATA+TGG - chr4_3:62491815-62491834 Msa0654310:CDS 20.0%
!! AGTAAGTATAAAATTCTGAA+AGG - chr4_3:62492534-62492553 Msa0654310:CDS 20.0%
!!! TTTTGATTTTGATAATCTCT+TGG - chr4_3:62493148-62493167 Msa0654310:CDS 20.0%
!! AATTAAAGAAGAAAAACTGA+AGG - chr4_3:62495539-62495558 Msa0654310:intron 20.0%
!! TGAAAATTGAAACTATTGAA+TGG + chr4_3:62495834-62495853 None:intergenic 20.0%
!!! CAACACTATTTTGTTGATTT+TGG - chr4_3:62490257-62490276 Msa0654310:three_prime_UTR 25.0%
! AATTACTCTTGTTAATGCAA+CGG + chr4_3:62490689-62490708 None:intergenic 25.0%
! AAATGACAAGTTGTTAAACA+TGG + chr4_3:62490767-62490786 None:intergenic 25.0%
!! AATTTTGCTTGTTTCATAGT+AGG - chr4_3:62490812-62490831 Msa0654310:CDS 25.0%
! TAAAAAGTGAATTGTCTCTA+GGG + chr4_3:62490868-62490887 None:intergenic 25.0%
! ATAAAAAGTGAATTGTCTCT+AGG + chr4_3:62490869-62490888 None:intergenic 25.0%
! CATTGAATAACTAATGTATC+TGG - chr4_3:62490892-62490911 Msa0654310:CDS 25.0%
!! TAGGCTTTTAAATAAGGTTA+AGG + chr4_3:62491199-62491218 None:intergenic 25.0%
!! TAAAAGCCTATTTTGTGATA+AGG - chr4_3:62491209-62491228 Msa0654310:CDS 25.0%
! TAAAGACCTTATCACAAAAT+AGG + chr4_3:62491218-62491237 None:intergenic 25.0%
!!! GTTAGTTTTGTTAGGTTTAA+AGG - chr4_3:62491324-62491343 Msa0654310:CDS 25.0%
!! TTGTTAGGTTTAAAGGTTTT+TGG - chr4_3:62491331-62491350 Msa0654310:CDS 25.0%
! GAAAATTAAATGAAGAGAAG+AGG + chr4_3:62491498-62491517 None:intergenic 25.0%
! TGAAAATTGTATAGATTTGG+TGG + chr4_3:62491601-62491620 None:intergenic 25.0%
!! TATACCTTTAGTTTAACCAA+AGG + chr4_3:62491787-62491806 None:intergenic 25.0%
! CAGATTATAATAAGCAAACA+TGG + chr4_3:62491874-62491893 None:intergenic 25.0%
!!! ATGGTTTTAACAAAAATGAG+GGG + chr4_3:62492128-62492147 None:intergenic 25.0%
!!! CATGGTTTTAACAAAAATGA+GGG + chr4_3:62492129-62492148 None:intergenic 25.0%
!!! TCATGGTTTTAACAAAAATG+AGG + chr4_3:62492130-62492149 None:intergenic 25.0%
!! TATAAAATTCTGAAAGGAGA+CGG - chr4_3:62492540-62492559 Msa0654310:CDS 25.0%
!! GATTTGGAAAATGTATTTTC+AGG + chr4_3:62493272-62493291 None:intergenic 25.0%
!!! ATTTCTGCTTTACTTTTTCT+TGG + chr4_3:62493971-62493990 None:intergenic 25.0%
! AATTCAATGCTTACTAATCT+AGG - chr4_3:62494244-62494263 Msa0654310:intron 25.0%
! CAAAAAGAAGAATATAAAGC+AGG - chr4_3:62494757-62494776 Msa0654310:intron 25.0%
!!! GAATGTTGTTTTTGTATATC+TGG + chr4_3:62494849-62494868 None:intergenic 25.0%
!!! AAGAAATTTTGGCTCATAAA+AGG - chr4_3:62494974-62494993 Msa0654310:intron 25.0%
! TGAATTCATTGTTAACATCT+GGG - chr4_3:62495640-62495659 Msa0654310:intron 25.0%
! AAAACTATCAGCTTGAATAA+AGG + chr4_3:62495709-62495728 None:intergenic 25.0%
!! AATTTGTGCATTTTCATTGA+AGG - chr4_3:62495752-62495771 Msa0654310:CDS 25.0%
! TCATCTGAAAATTGTAAATG+TGG - chr4_3:62495851-62495870 Msa0654310:five_prime_UTR 25.0%
! TGAATGTTGTATCATATGTT+TGG - chr4_3:62495892-62495911 Msa0654310:five_prime_UTR 25.0%
!! AATCGCCTCATTTAAAATAA+AGG + chr4_3:62495921-62495940 None:intergenic 25.0%
TTCTTTACGAGGGAATAATT+GGG - chr4_3:62490343-62490362 Msa0654310:three_prime_UTR 30.0%
AGTCACTGAAATTCAAATCA+TGG + chr4_3:62490511-62490530 None:intergenic 30.0%
CAATGTAATTCATCGGTATA+TGG + chr4_3:62490652-62490671 None:intergenic 30.0%
TTAGCAGCAATGTAATTCAT+CGG + chr4_3:62490659-62490678 None:intergenic 30.0%
GTGAATTGTCTCCTATAATA+AGG - chr4_3:62490935-62490954 Msa0654310:CDS 30.0%
TGAAACACAAACAATATAGC+CGG + chr4_3:62491013-62491032 None:intergenic 30.0%
TATCAACAAGTAAGCTCATA+GGG - chr4_3:62491282-62491301 Msa0654310:CDS 30.0%
!!! TTGAGTAGGTTAGTTTTGTT+AGG - chr4_3:62491316-62491335 Msa0654310:CDS 30.0%
!! TAGGTTTAAAGGTTTTTGGA+TGG - chr4_3:62491335-62491354 Msa0654310:CDS 30.0%
CAAAAGTCTGTTTAGCTAAA+AGG + chr4_3:62491374-62491393 None:intergenic 30.0%
GTAATGAAGAAAATAGGTCA+AGG + chr4_3:62491403-62491422 None:intergenic 30.0%
!!! ACATAAGTTTTGTTTGGTCT+AGG - chr4_3:62491421-62491440 Msa0654310:CDS 30.0%
TAGGTTTGAGTACATTAGTT+TGG - chr4_3:62491440-62491459 Msa0654310:CDS 30.0%
! TTGAGTACATTAGTTTGGTT+TGG - chr4_3:62491445-62491464 Msa0654310:CDS 30.0%
GGAAGCTAAACATACAATTA+GGG + chr4_3:62491688-62491707 None:intergenic 30.0%
TAGTGAGTTATCCAATCTAA+GGG + chr4_3:62491709-62491728 None:intergenic 30.0%
ATAGTGAGTTATCCAATCTA+AGG + chr4_3:62491710-62491729 None:intergenic 30.0%
TTTAAGCTTCATAGAACCTT+TGG - chr4_3:62491768-62491787 Msa0654310:CDS 30.0%
AGAACCTTTGGTTAAACTAA+AGG - chr4_3:62491780-62491799 Msa0654310:CDS 30.0%
TATATGGAAAACGAGATCTT+GGG - chr4_3:62491831-62491850 Msa0654310:CDS 30.0%
TTTAATTGGGACAAAGGATT+TGG + chr4_3:62491909-62491928 None:intergenic 30.0%
CCAAAATTTAATTGGGACAA+AGG + chr4_3:62491915-62491934 None:intergenic 30.0%
! CCTTTGTCCCAATTAAATTT+TGG - chr4_3:62491912-62491931 Msa0654310:CDS 30.0%
!!! TGGTTTTAACAAAAATGAGG+GGG + chr4_3:62492127-62492146 None:intergenic 30.0%
AGAGTGAATATTCAAAAGCA+TGG + chr4_3:62492222-62492241 None:intergenic 30.0%
ATATTCACTCTAATTTCTCC+AGG - chr4_3:62492231-62492250 Msa0654310:CDS 30.0%
AGAATTTCATCTTCATCTCT+AGG + chr4_3:62492273-62492292 None:intergenic 30.0%
! TACTACAGGATTTTCTATTC+AGG - chr4_3:62492401-62492420 Msa0654310:CDS 30.0%
AACTGAAACAACGAATAGTA+TGG - chr4_3:62492452-62492471 Msa0654310:CDS 30.0%
! ATAAAATTCTGAAAGGAGAC+GGG - chr4_3:62492541-62492560 Msa0654310:CDS 30.0%
ACCATCAAGATTATCAGAAA+TGG + chr4_3:62493174-62493193 None:intergenic 30.0%
! TTTGTCAAAGGTTTGAGATT+TGG + chr4_3:62493288-62493307 None:intergenic 30.0%
AATTCAGTCATTGAAAAGAG+AGG - chr4_3:62493325-62493344 Msa0654310:CDS 30.0%
AAAGTGACTTAAACAACACT+GGG - chr4_3:62493417-62493436 Msa0654310:CDS 30.0%
!! AGTTTGAGTTCTGAAATTAC+TGG - chr4_3:62493488-62493507 Msa0654310:CDS 30.0%
! GCTTTTGAATTCGAAAAAGA+AGG - chr4_3:62493577-62493596 Msa0654310:CDS 30.0%
TTATCATCATATGTCTTCGA+AGG + chr4_3:62493887-62493906 None:intergenic 30.0%
AAAGTAAAGCAGAAATTCAG+AGG - chr4_3:62493975-62493994 Msa0654310:intron 30.0%
AAGTAAAGCAGAAATTCAGA+GGG - chr4_3:62493976-62493995 Msa0654310:intron 30.0%
ACTCTTGAGCTTAAAAAGAA+AGG - chr4_3:62494000-62494019 Msa0654310:CDS 30.0%
!! TAAGCATTGAATTCAATGCT+GGG + chr4_3:62494237-62494256 None:intergenic 30.0%
! CTTAACAGGTTCTTCTTTTA+TGG + chr4_3:62494299-62494318 None:intergenic 30.0%
CATAAAAGAAGAACCTGTTA+AGG - chr4_3:62494297-62494316 Msa0654310:intron 30.0%
!! GGCTGAGGAAATTTTAAAAA+AGG - chr4_3:62494429-62494448 Msa0654310:intron 30.0%
TTTAAAAAAGGCCAAGAATC+TGG - chr4_3:62494441-62494460 Msa0654310:intron 30.0%
CAAGTGAAAATCTCACAAAA+AGG - chr4_3:62494623-62494642 Msa0654310:intron 30.0%
TTCAGTTAATTCATCTCAAG+CGG - chr4_3:62494780-62494799 Msa0654310:intron 30.0%
!! TGTTTTTGTATATCTGGTCT+TGG + chr4_3:62494843-62494862 None:intergenic 30.0%
! AGTCACTTCTTTTCTTCTTT+GGG + chr4_3:62494875-62494894 None:intergenic 30.0%
AAATTTCTTGACGCAAAGAA+AGG + chr4_3:62494963-62494982 None:intergenic 30.0%
! TTCTTTGCGTCAAGAAATTT+TGG - chr4_3:62494963-62494982 Msa0654310:intron 30.0%
!!! AATTTTGGCTCATAAAAGGA+AGG - chr4_3:62494978-62494997 Msa0654310:intron 30.0%
TTGAACAACATTTGATGTGT+TGG + chr4_3:62495130-62495149 None:intergenic 30.0%
TAAAGAAGAAAAACTGAAGG+CGG - chr4_3:62495542-62495561 Msa0654310:intron 30.0%
! CAGCTTCTTTTCATACATTT+TGG + chr4_3:62495622-62495641 None:intergenic 30.0%
CTGAATTCATTGTTAACATC+TGG - chr4_3:62495639-62495658 Msa0654310:intron 30.0%
!! TGTAAATGTGGTTCTAAACA+TGG - chr4_3:62495863-62495882 Msa0654310:five_prime_UTR 30.0%
!!! GGTGTCCTTTATTTTAAATG+AGG - chr4_3:62495913-62495932 Msa0654310:five_prime_UTR 30.0%
TAGTAGAAGAGGATTAACGA+AGG + chr4_3:62490228-62490247 None:intergenic 35.0%
CAATTATTCCCTCGTAAAGA+AGG + chr4_3:62490344-62490363 None:intergenic 35.0%
CTTCTTTACGAGGGAATAAT+TGG - chr4_3:62490342-62490361 Msa0654310:three_prime_UTR 35.0%
ATTGATGAAGGTGAATTGAG+CGG + chr4_3:62490399-62490418 None:intergenic 35.0%
ATTAGCACAATCGAAGAATG+GGG + chr4_3:62490435-62490454 None:intergenic 35.0%
GATTAGCACAATCGAAGAAT+GGG + chr4_3:62490436-62490455 None:intergenic 35.0%
AGATTAGCACAATCGAAGAA+TGG + chr4_3:62490437-62490456 None:intergenic 35.0%
! GTAACAGAGTCTTTGATGAT+TGG + chr4_3:62490481-62490500 None:intergenic 35.0%
TCTCCTATAATAAGGAACGA+AGG - chr4_3:62490943-62490962 Msa0654310:CDS 35.0%
CTACCTTCGTTCCTTATTAT+AGG + chr4_3:62490949-62490968 None:intergenic 35.0%
! GAGAATCAATTTTTCATGCC+CGG - chr4_3:62490991-62491010 Msa0654310:CDS 35.0%
GAAACACAAACAATATAGCC+GGG + chr4_3:62491012-62491031 None:intergenic 35.0%
!! ACCAAGCTTTGAAAAAAGCT+GGG + chr4_3:62491172-62491191 None:intergenic 35.0%
!! AACCAAGCTTTGAAAAAAGC+TGG + chr4_3:62491173-62491192 None:intergenic 35.0%
!!! GCTTTTTTCAAAGCTTGGTT+TGG - chr4_3:62491173-62491192 Msa0654310:CDS 35.0%
AGGTCTTTAGATAAGTGATG+AGG - chr4_3:62491229-62491248 Msa0654310:CDS 35.0%
AGGTCTATAGATAAGTGATG+AGG - chr4_3:62491258-62491277 Msa0654310:CDS 35.0%
CTATCAACAAGTAAGCTCAT+AGG - chr4_3:62491281-62491300 Msa0654310:CDS 35.0%
!! AAGGTTTTTGGATGGTCTAA+AGG - chr4_3:62491343-62491362 Msa0654310:CDS 35.0%
GCTAAACATACAATTAGGGA+CGG + chr4_3:62491684-62491703 None:intergenic 35.0%
GGGAAGCTAAACATACAATT+AGG + chr4_3:62491689-62491708 None:intergenic 35.0%
! ATGTTTAGCTTCCCTTAGAT+TGG - chr4_3:62491695-62491714 Msa0654310:CDS 35.0%
CTATATGGAAAACGAGATCT+TGG - chr4_3:62491830-62491849 Msa0654310:CDS 35.0%
AAGTTGTACCCAACAAAGAA+TGG - chr4_3:62491992-62492011 Msa0654310:CDS 35.0%
GAAATTCTCAACCAGATTCT+TGG - chr4_3:62492285-62492304 Msa0654310:CDS 35.0%
! AACGAGGAACTTCTTTTATC+AGG - chr4_3:62492312-62492331 Msa0654310:CDS 35.0%
AATAGTATGGCTGTTGATGT+GGG - chr4_3:62492465-62492484 Msa0654310:CDS 35.0%
!! CCTTGAAAGCTTTTAAGAGA+GGG - chr4_3:62492577-62492596 Msa0654310:CDS 35.0%
!! ATGCTTTGGAAATTCAGCTA+AGG - chr4_3:62492622-62492641 Msa0654310:CDS 35.0%
AAAGACATTTCTGTTGAGTC+TGG - chr4_3:62492699-62492718 Msa0654310:CDS 35.0%
AAAGTCAGCAAACTTGAGTT+TGG - chr4_3:62492827-62492846 Msa0654310:CDS 35.0%
AAAAGTTTCTGCAATCAAGG+AGG + chr4_3:62492865-62492884 None:intergenic 35.0%
TGCAAAAGTTTCTGCAATCA+AGG + chr4_3:62492868-62492887 None:intergenic 35.0%
GGTTGTTGCTATGAAAAAGA+AGG - chr4_3:62492929-62492948 Msa0654310:CDS 35.0%
AAAAATCCTAGAGAAGCAAC+TGG - chr4_3:62493010-62493029 Msa0654310:CDS 35.0%
GCCATTTCTGATAATCTTGA+TGG - chr4_3:62493170-62493189 Msa0654310:CDS 35.0%
TAATTTAGAAGTGACCGATG+AGG - chr4_3:62493193-62493212 Msa0654310:CDS 35.0%
AGGTAATACTGAAGAAGCAA+TGG - chr4_3:62493367-62493386 Msa0654310:CDS 35.0%
AGCAATGGCGATATTGAAAA+AGG - chr4_3:62493382-62493401 Msa0654310:CDS 35.0%
GAAAGTGACTTAAACAACAC+TGG - chr4_3:62493416-62493435 Msa0654310:CDS 35.0%
TTGCAAAAAGTTACTCCTGT+TGG - chr4_3:62493461-62493480 Msa0654310:CDS 35.0%
TGCAAAAAGTTACTCCTGTT+GGG - chr4_3:62493462-62493481 Msa0654310:CDS 35.0%
! AAATAATAATGCCGCTTCCA+CGG - chr4_3:62493520-62493539 Msa0654310:CDS 35.0%
ATGAAGCAGAAGAAGAAATG+CGG - chr4_3:62493630-62493649 Msa0654310:CDS 35.0%
AGCATATCTTTCACTCCTTA+CGG - chr4_3:62493811-62493830 Msa0654310:CDS 35.0%
GGATTGTTCGAAGATTTAGA+AGG + chr4_3:62493866-62493885 None:intergenic 35.0%
!! CTCAGAAAAGTATCATCAAC+TGG + chr4_3:62493917-62493936 None:intergenic 35.0%
!!! CCAATGTTTTGGCCATTTTA+AGG + chr4_3:62494072-62494091 None:intergenic 35.0%
CCTTAAAATGGCCAAAACAT+TGG - chr4_3:62494069-62494088 Msa0654310:CDS 35.0%
! TATCTTGGCTTCCAATGTTT+TGG + chr4_3:62494083-62494102 None:intergenic 35.0%
!! TGCTCTGAAGAATAATGTAC+AGG - chr4_3:62494114-62494133 Msa0654310:CDS 35.0%
GAAGAATAATGTACAGGTTG+AGG - chr4_3:62494120-62494139 Msa0654310:CDS 35.0%
!! GTAAGCATTGAATTCAATGC+TGG + chr4_3:62494238-62494257 None:intergenic 35.0%
CAATGCTTACTAATCTAGGA+TGG - chr4_3:62494248-62494267 Msa0654310:intron 35.0%
! AGGTTCTTCTTTTATGGTCA+CGG + chr4_3:62494293-62494312 None:intergenic 35.0%
!! AGATTTTGAGAGCCAAAACA+AGG - chr4_3:62494477-62494496 Msa0654310:intron 35.0%
!!! CGGAACAGATTTTTTATCCT+TGG + chr4_3:62494521-62494540 None:intergenic 35.0%
ATGCTCATCATGTGCAAAAT+GGG + chr4_3:62494578-62494597 None:intergenic 35.0%
TCAGTTAATTCATCTCAAGC+GGG - chr4_3:62494781-62494800 Msa0654310:intron 35.0%
! CAGTCACTTCTTTTCTTCTT+TGG + chr4_3:62494876-62494895 None:intergenic 35.0%
!! ACATTTGACTGGTTTGTGTT+TGG + chr4_3:62494913-62494932 None:intergenic 35.0%
! AATCTGGAACAACATTTGAC+TGG + chr4_3:62494924-62494943 None:intergenic 35.0%
! TCACAGTCTCATGTTTTTCT+GGG + chr4_3:62495464-62495483 None:intergenic 35.0%
! TTCACAGTCTCATGTTTTTC+TGG + chr4_3:62495465-62495484 None:intergenic 35.0%
! GCTGAATTTTCTCTTGGTTA+GGG + chr4_3:62495509-62495528 None:intergenic 35.0%
! AGCTGAATTTTCTCTTGGTT+AGG + chr4_3:62495510-62495529 None:intergenic 35.0%
!! CTTCTAGCTGAATTTTCTCT+TGG + chr4_3:62495515-62495534 None:intergenic 35.0%
ACTATCAGCTTGAATAAAGG+AGG + chr4_3:62495706-62495725 None:intergenic 35.0%
! TTGTGCATTTTCATTGAAGG+AGG - chr4_3:62495755-62495774 Msa0654310:CDS 35.0%
! TGTTTCTGCTGTAGTAGAAG+AGG + chr4_3:62490239-62490258 None:intergenic 40.0%
CAGAAGATGTTAGCGAAGAT+CGG - chr4_3:62490305-62490324 Msa0654310:three_prime_UTR 40.0%
AGAAGATGTTAGCGAAGATC+GGG - chr4_3:62490306-62490325 Msa0654310:three_prime_UTR 40.0%
ATTCACCTTCATCAATCGCA+AGG - chr4_3:62490403-62490422 Msa0654310:three_prime_UTR 40.0%
GTTAACCTTGCGATTGATGA+AGG + chr4_3:62490411-62490430 None:intergenic 40.0%
TTAGCACAATCGAAGAATGG+GGG + chr4_3:62490434-62490453 None:intergenic 40.0%
TCCTTTAACGTAGCAGATCA+GGG - chr4_3:62490625-62490644 Msa0654310:CDS 40.0%
CACCTTAATGCATTGCATGT+AGG - chr4_3:62491033-62491052 Msa0654310:CDS 40.0%
CTCCTACATGCAATGCATTA+AGG + chr4_3:62491038-62491057 None:intergenic 40.0%
TAATGCATTGCATGTAGGAG+TGG - chr4_3:62491038-62491057 Msa0654310:CDS 40.0%
TTGCATGTAGGAGTGGAAAT+AGG - chr4_3:62491045-62491064 Msa0654310:CDS 40.0%
TAGGTTTGATGTATGGAGTC+AGG + chr4_3:62491098-62491117 None:intergenic 40.0%
CACGTGTTAGGTTTGATGTA+TGG + chr4_3:62491105-62491124 None:intergenic 40.0%
!!! ACCCAGCTTTTTTCAAAGCT+TGG - chr4_3:62491168-62491187 Msa0654310:CDS 40.0%
GATAAGTGATGAGGCTATCA+AGG - chr4_3:62491238-62491257 Msa0654310:CDS 40.0%
GGGTCGATATATACTTGAGT+AGG - chr4_3:62491302-62491321 Msa0654310:CDS 40.0%
TCCTGAAAGAGTAAGCCATA+AGG - chr4_3:62491633-62491652 Msa0654310:CDS 40.0%
ACCTTATGGCTTACTCTTTC+AGG + chr4_3:62491637-62491656 None:intergenic 40.0%
AGTAAGCCATAAGGTCATTG+AGG - chr4_3:62491642-62491661 Msa0654310:CDS 40.0%
!! TTTTTCAGCACCACTGTAGA+AGG - chr4_3:62491949-62491968 Msa0654310:CDS 40.0%
ACGCAAAGCCATTCTTTGTT+GGG + chr4_3:62492003-62492022 None:intergenic 40.0%
CAAGGTTCACATATACGTAC+AGG + chr4_3:62492041-62492060 None:intergenic 40.0%
ACCTTGTAAGAAGCTAGAAG+AGG - chr4_3:62492055-62492074 Msa0654310:CDS 40.0%
!! CAAGCACAGGTTGATTATCA+TGG + chr4_3:62492147-62492166 None:intergenic 40.0%
AAGCAATCAACCAGTGACAA+AGG - chr4_3:62492336-62492355 Msa0654310:CDS 40.0%
GCATCTTCTTCAAGTACTAC+AGG - chr4_3:62492387-62492406 Msa0654310:CDS 40.0%
GAATAGTATGGCTGTTGATG+TGG - chr4_3:62492464-62492483 Msa0654310:CDS 40.0%
!! GCCTTGAAAGCTTTTAAGAG+AGG - chr4_3:62492576-62492595 Msa0654310:CDS 40.0%
CCCTCTCTTAAAAGCTTTCA+AGG + chr4_3:62492580-62492599 None:intergenic 40.0%
!! GAAAGCTTTTAAGAGAGGGA+AGG - chr4_3:62492581-62492600 Msa0654310:CDS 40.0%
GGAAATTCAGCTAAGGAAAG+CGG - chr4_3:62492629-62492648 Msa0654310:CDS 40.0%
ATATCCGACATGTTTCCAGA+AGG + chr4_3:62492672-62492691 None:intergenic 40.0%
TCCTCAGACTGGTAAAGATA+AGG - chr4_3:62492740-62492759 Msa0654310:CDS 40.0%
TCCTTATCTTTACCAGTCTG+AGG + chr4_3:62492744-62492763 None:intergenic 40.0%
TACTTCAGAACTTCAAGAGC+TGG - chr4_3:62492770-62492789 Msa0654310:CDS 40.0%
ACTTCAGAACTTCAAGAGCT+GGG - chr4_3:62492771-62492790 Msa0654310:CDS 40.0%
TCAGCAAACTTGAGTTTGGA+GGG - chr4_3:62492831-62492850 Msa0654310:CDS 40.0%
! GCAGAAACTTTTGCAAAGAC+AGG - chr4_3:62492873-62492892 Msa0654310:CDS 40.0%
TGCAAAGACAGGTGAAGAAA+AGG - chr4_3:62492884-62492903 Msa0654310:CDS 40.0%
GCAAAGACAGGTGAAGAAAA+GGG - chr4_3:62492885-62492904 Msa0654310:CDS 40.0%
TAAGCTTGCAGAAGCTAAAG+AGG - chr4_3:62492974-62492993 Msa0654310:CDS 40.0%
GAGCTATCAGCATTAATACG+CGG - chr4_3:62493074-62493093 Msa0654310:CDS 40.0%
TGCTCATGATCATGCAGATT+TGG + chr4_3:62493125-62493144 None:intergenic 40.0%
AATCTGCATGATCATGAGCA+TGG - chr4_3:62493125-62493144 Msa0654310:CDS 40.0%
TAGCAACGCTTCTTTGTCAA+AGG + chr4_3:62493300-62493319 None:intergenic 40.0%
! GAACTCAAACTTTTCCCAAC+AGG + chr4_3:62493479-62493498 None:intergenic 40.0%
!! TGAATCATCAACCGGCTTTT+TGG + chr4_3:62493551-62493570 None:intergenic 40.0%
GCTCTCTTTGAATCATCAAC+CGG + chr4_3:62493559-62493578 None:intergenic 40.0%
AGAAGGTTCTTGCATTGAGA+AGG - chr4_3:62493594-62493613 Msa0654310:CDS 40.0%
GAAGGTTCTTGCATTGAGAA+GGG - chr4_3:62493595-62493614 Msa0654310:CDS 40.0%
TTCTTGCATTGAGAAGGGAA+GGG - chr4_3:62493600-62493619 Msa0654310:CDS 40.0%
ATTGAGAAGGGAAGGGAAAA+TGG - chr4_3:62493607-62493626 Msa0654310:CDS 40.0%
TTCGTCGATGATGATTGACT+CGG + chr4_3:62493701-62493720 None:intergenic 40.0%
CAATCATCATCGACGAATAC+TGG - chr4_3:62493704-62493723 Msa0654310:CDS 40.0%
GTAAGGAGTGAAAGATATGC+TGG + chr4_3:62493812-62493831 None:intergenic 40.0%
! TTTAAGACGGGAAGGGAAAA+CGG - chr4_3:62494030-62494049 Msa0654310:CDS 40.0%
TGCAGAGGAAGTCCTTAAAA+TGG - chr4_3:62494057-62494076 Msa0654310:CDS 40.0%
AGCATCCATCTCTTCTATCT+TGG + chr4_3:62494098-62494117 None:intergenic 40.0%
! CTTCAATTCTCCAGTTGATG+TGG - chr4_3:62494162-62494181 Msa0654310:intron 40.0%
!! ATGTGGCAGTTGATGAAGAA+AGG - chr4_3:62494179-62494198 Msa0654310:intron 40.0%
!! TGTGGCAGTTGATGAAGAAA+GGG - chr4_3:62494180-62494199 Msa0654310:intron 40.0%
!! AGTTGATGAAGAAAGGGACA+TGG - chr4_3:62494186-62494205 Msa0654310:intron 40.0%
! GCTTACTAATCTAGGATGGA+AGG - chr4_3:62494252-62494271 Msa0654310:intron 40.0%
! AATCTAGGATGGAAGGATGA+AGG - chr4_3:62494259-62494278 Msa0654310:intron 40.0%
! GGTTCTTCTTTTATGGTCAC+GGG + chr4_3:62494292-62494311 None:intergenic 40.0%
GTACTAGTAGCTTCCTTAAC+AGG + chr4_3:62494313-62494332 None:intergenic 40.0%
CTAGTACTGTCACAACTTCA+AGG - chr4_3:62494326-62494345 Msa0654310:intron 40.0%
GTCACAACTTCAAGGAACAA+AGG - chr4_3:62494334-62494353 Msa0654310:intron 40.0%
! GAGAACTCTTAGCGTTGAAA+AGG - chr4_3:62494368-62494387 Msa0654310:intron 40.0%
! ACTCTTAGCGTTGAAAAGGA+AGG - chr4_3:62494372-62494391 Msa0654310:intron 40.0%
GCTCTCAAAATCTTCCAGTT+GGG + chr4_3:62494470-62494489 None:intergenic 40.0%
!! TCAGCAACAAGTCCTTGTTT+TGG + chr4_3:62494492-62494511 None:intergenic 40.0%
TTTCCGTGAGATGATTCAGA+CGG + chr4_3:62494541-62494560 None:intergenic 40.0%
GATGCTCATCATGTGCAAAA+TGG + chr4_3:62494579-62494598 None:intergenic 40.0%
CATATGCCAGATCTACTTAC+TGG - chr4_3:62494697-62494716 Msa0654310:intron 40.0%
CCATTACCAGTAAGTAGATC+TGG + chr4_3:62494706-62494725 None:intergenic 40.0%
CCAGATCTACTTACTGGTAA+TGG - chr4_3:62494703-62494722 Msa0654310:intron 40.0%
TGTTCCAGATTATGCTTCTC+AGG - chr4_3:62494933-62494952 Msa0654310:intron 40.0%
!! GCAGTTGCTTTGAAAAGAGA+AGG - chr4_3:62495000-62495019 Msa0654310:intron 40.0%
AAGGAAAACTAACAGAAGCC+AGG - chr4_3:62495019-62495038 Msa0654310:intron 40.0%
AGGAAAACTAACAGAAGCCA+GGG - chr4_3:62495020-62495039 Msa0654310:intron 40.0%
AAACGGTCACGACTAGTAAA+CGG + chr4_3:62495186-62495205 None:intergenic 40.0%
ACTCCTGTTGCAACTTGAAA+CGG + chr4_3:62495203-62495222 None:intergenic 40.0%
AAGCAGAAGCTGAGTTAGAA+CGG - chr4_3:62495277-62495296 Msa0654310:intron 40.0%
TCAGAGCAGATAAGAGTTGA+GGG + chr4_3:62495398-62495417 None:intergenic 40.0%
TTCAGAGCAGATAAGAGTTG+AGG + chr4_3:62495399-62495418 None:intergenic 40.0%
!! TTATCTGCTCTGAAAGCTAC+TGG - chr4_3:62495405-62495424 Msa0654310:intron 40.0%
! TTGGTTAGGGTTCTCGATTT+TGG + chr4_3:62495496-62495515 None:intergenic 40.0%
! AAGTCAATGCTGCTACTTCA+AGG - chr4_3:62495672-62495691 Msa0654310:intron 40.0%
ACAAAACGAGTGCACGATTC+CGG + chr4_3:62490170-62490189 None:intergenic 45.0%
CACCAAAGCCTTCTTTACGA+GGG - chr4_3:62490333-62490352 Msa0654310:three_prime_UTR 45.0%
TTCCCTCGTAAAGAAGGCTT+TGG + chr4_3:62490338-62490357 None:intergenic 45.0%
GTTGATGCCTCTAATTGCCA+GGG - chr4_3:62490368-62490387 Msa0654310:three_prime_UTR 45.0%
TAGCACAATCGAAGAATGGG+GGG + chr4_3:62490433-62490452 None:intergenic 45.0%
TACGTTAAAGGAGGCAGGTA+AGG + chr4_3:62490617-62490636 None:intergenic 45.0%
CTGATCTGCTACGTTAAAGG+AGG + chr4_3:62490626-62490645 None:intergenic 45.0%
CTCCTTTAACGTAGCAGATC+AGG - chr4_3:62490624-62490643 Msa0654310:CDS 45.0%
ACCCTGATCTGCTACGTTAA+AGG + chr4_3:62490629-62490648 None:intergenic 45.0%
ATGGATCAAGCTCACGTGTT+AGG + chr4_3:62491117-62491136 None:intergenic 45.0%
ACCACTCCTCAATGACCTTA+TGG + chr4_3:62491651-62491670 None:intergenic 45.0%
GAAAACGAGATCTTGGGTAC+TGG - chr4_3:62491837-62491856 Msa0654310:CDS 45.0%
CACGCAAAGCCATTCTTTGT+TGG + chr4_3:62492004-62492023 None:intergenic 45.0%
! CAACAAAGAATGGCTTTGCG+TGG - chr4_3:62492002-62492021 Msa0654310:CDS 45.0%
!! GCCTCTTCTAGCTTCTTACA+AGG + chr4_3:62492059-62492078 None:intergenic 45.0%
ACTCTAACACAAGCAAGCAC+AGG + chr4_3:62492160-62492179 None:intergenic 45.0%
!! CCTCGTTTTGACCAAGAATC+TGG + chr4_3:62492299-62492318 None:intergenic 45.0%
CCAGATTCTTGGTCAAAACG+AGG - chr4_3:62492296-62492315 Msa0654310:CDS 45.0%
! GTTACGTCAGCAAGCTTTAG+CGG - chr4_3:62492506-62492525 Msa0654310:CDS 45.0%
CGGAAAAAGTTGTTGCCTTC+TGG - chr4_3:62492654-62492673 Msa0654310:CDS 45.0%
! GTTGCCTTCTGGAAACATGT+CGG - chr4_3:62492665-62492684 Msa0654310:CDS 45.0%
ACAAAGTCACTTCCTCAGAC+TGG - chr4_3:62492729-62492748 Msa0654310:CDS 45.0%
GTCAGCAAACTTGAGTTTGG+AGG - chr4_3:62492830-62492849 Msa0654310:CDS 45.0%
! CAACCTCAGTCTTGTCAATC+CGG + chr4_3:62492914-62492933 None:intergenic 45.0%
GTTCTTCCAGTTGCTTCTCT+AGG + chr4_3:62493019-62493038 None:intergenic 45.0%
AGAGAAGCAACTGGAAGAAC+AGG - chr4_3:62493019-62493038 Msa0654310:CDS 45.0%
ATCAGCATTAATACGCGGCA+TGG - chr4_3:62493079-62493098 Msa0654310:CDS 45.0%
AGTGACCGATGAGGATTTGA+TGG - chr4_3:62493202-62493221 Msa0654310:CDS 45.0%
AGGGTCCATCAAATCCTCAT+CGG + chr4_3:62493210-62493229 None:intergenic 45.0%
GCTCTTAATCAAAAGCGAGC+AGG - chr4_3:62493347-62493366 Msa0654310:CDS 45.0%
GTTCTTGCATTGAGAAGGGA+AGG - chr4_3:62493599-62493618 Msa0654310:CDS 45.0%
AGTTCTTGAGCATCAGCTGA+TGG - chr4_3:62493661-62493680 Msa0654310:CDS 45.0%
GAGTAGAAGTCCTCTAGTTG+AGG - chr4_3:62493745-62493764 Msa0654310:CDS 45.0%
AGAAGTCCTCTAGTTGAGGA+AGG - chr4_3:62493749-62493768 Msa0654310:CDS 45.0%
TCTTTCACTCCTTACGGACT+TGG - chr4_3:62493817-62493836 Msa0654310:CDS 45.0%
CTTTCACTCCTTACGGACTT+GGG - chr4_3:62493818-62493837 Msa0654310:CDS 45.0%
!! GAAAGGCCCTTGCTTTAAGA+CGG - chr4_3:62494017-62494036 Msa0654310:CDS 45.0%
!! AAAGGCCCTTGCTTTAAGAC+GGG - chr4_3:62494018-62494037 Msa0654310:CDS 45.0%
GGAAGCCAAGATAGAAGAGA+TGG - chr4_3:62494090-62494109 Msa0654310:CDS 45.0%
TCATCAACTGCCACATCAAC+TGG + chr4_3:62494175-62494194 None:intergenic 45.0%
! GGACATGGTTGTTTCAGAAG+AGG - chr4_3:62494201-62494220 Msa0654310:intron 45.0%
!! AAAGGAAGGCACTTGCTTTG+AGG - chr4_3:62494386-62494405 Msa0654310:intron 45.0%
GGCTCTCAAAATCTTCCAGT+TGG + chr4_3:62494471-62494490 None:intergenic 45.0%
CTTGTTGCTGAATGCATCCA+AGG - chr4_3:62494501-62494520 Msa0654310:intron 45.0%
GTTCCGTCTGAATCATCTCA+CGG - chr4_3:62494535-62494554 Msa0654310:intron 45.0%
TGTGCAAAATGGGAGTTTGC+AGG + chr4_3:62494568-62494587 None:intergenic 45.0%
TGAGCATCCATTATCTGCTG+AGG - chr4_3:62494591-62494610 Msa0654310:intron 45.0%
ATTGCTCATAGCTCCTCAAC+TGG - chr4_3:62494664-62494683 Msa0654310:intron 45.0%
GATCTGGCATATGCATAGAG+TGG + chr4_3:62494690-62494709 None:intergenic 45.0%
GAGGAGTCCAAAGGAATAGT+AGG + chr4_3:62494808-62494827 None:intergenic 45.0%
AGATTCACTGAGGAGTCCAA+AGG + chr4_3:62494817-62494836 None:intergenic 45.0%
! TCGTCCTGAGAAGCATAATC+TGG + chr4_3:62494940-62494959 None:intergenic 45.0%
CAACCTCTTCTCTAACAGCT+TGG + chr4_3:62495061-62495080 None:intergenic 45.0%
CAAGCTGTTAGAGAAGAGGT+TGG - chr4_3:62495059-62495078 Msa0654310:intron 45.0%
TTAGAGAAGAGGTTGGAGGA+TGG - chr4_3:62495066-62495085 Msa0654310:intron 45.0%
!! TGACCGTTTCAAGTTGCAAC+AGG - chr4_3:62495197-62495216 Msa0654310:intron 45.0%
AACGTCAAGCCCTAAAGCTA+CGG - chr4_3:62495235-62495254 Msa0654310:intron 45.0%
AGCAGAAGCTGAGTTAGAAC+GGG - chr4_3:62495278-62495297 Msa0654310:intron 45.0%
AAAGGCAATTGAAGCGCAGT+TGG - chr4_3:62495302-62495321 Msa0654310:intron 45.0%
ATCCACCGCATCTGACTTAT+CGG + chr4_3:62495349-62495368 None:intergenic 45.0%
!! AGGGTTCTCGATTTTGGCAA+CGG + chr4_3:62495490-62495509 None:intergenic 45.0%
!! GCGGTTAGTTTGAAACGATC+AGG - chr4_3:62495561-62495580 Msa0654310:intron 45.0%
AGGAAAACAAGCTGAAGCCT+TGG - chr4_3:62495581-62495600 Msa0654310:intron 45.0%
ATCACTCGTCGTGCAAGAAC+CGG - chr4_3:62490148-62490167 Msa0654310:three_prime_UTR 50.0%
! CCTCGTAAAGAAGGCTTTGG+TGG + chr4_3:62490335-62490354 None:intergenic 50.0%
CCACCAAAGCCTTCTTTACG+AGG - chr4_3:62490332-62490351 Msa0654310:three_prime_UTR 50.0%
CGTTGATGCCTCTAATTGCC+AGG - chr4_3:62490367-62490386 Msa0654310:three_prime_UTR 50.0%
GGAACAACCCTGGCAATTAG+AGG + chr4_3:62490378-62490397 None:intergenic 50.0%
TGAATTGAGCGGAACAACCC+TGG + chr4_3:62490388-62490407 None:intergenic 50.0%
TCTGCTACGTTAAAGGAGGC+AGG + chr4_3:62490622-62490641 None:intergenic 50.0%
GCCATAAGGTCATTGAGGAG+TGG - chr4_3:62491647-62491666 Msa0654310:CDS 50.0%
!! ACGAGATCTTGGGTACTGGA+AGG - chr4_3:62491841-62491860 Msa0654310:CDS 50.0%
!! AGATCTTGGGTACTGGAAGG+TGG - chr4_3:62491844-62491863 Msa0654310:CDS 50.0%
! AGCACCACTGTAGAAGGTGT+GGG - chr4_3:62491955-62491974 Msa0654310:CDS 50.0%
! AGGTGTGGGGGTCTATTTTG+CGG - chr4_3:62491969-62491988 Msa0654310:CDS 50.0%
! AAGAATGGCTTTGCGTGGAC+AGG - chr4_3:62492007-62492026 Msa0654310:CDS 50.0%
! AGAATGGCTTTGCGTGGACA+GGG - chr4_3:62492008-62492027 Msa0654310:CDS 50.0%
!! AGCACGATTTGAGTTGCGAC+AGG - chr4_3:62492079-62492098 Msa0654310:CDS 50.0%
!! GCACGATTTGAGTTGCGACA+GGG - chr4_3:62492080-62492099 Msa0654310:CDS 50.0%
!! GGTGCTGATTTCAAGCTTCC+TGG + chr4_3:62492252-62492271 None:intergenic 50.0%
ACCAGTGACAAAGGTCGTAG+TGG - chr4_3:62492345-62492364 Msa0654310:CDS 50.0%
ATGCAGCGCTAACTGATCTC+TGG + chr4_3:62492371-62492390 None:intergenic 50.0%
ACGTAACTCATCAGGAGTGG+TGG + chr4_3:62492493-62492512 None:intergenic 50.0%
CTGACGTAACTCATCAGGAG+TGG + chr4_3:62492496-62492515 None:intergenic 50.0%
! GCTTGCTGACGTAACTCATC+AGG + chr4_3:62492501-62492520 None:intergenic 50.0%
GAAAGGAGACGGGAAATCTG+AGG - chr4_3:62492551-62492570 Msa0654310:CDS 50.0%
TGAGAGGCAAGCAGATGCTT+TGG - chr4_3:62492608-62492627 Msa0654310:CDS 50.0%
TTCAGCTAAGGAAAGCGGCT+CGG - chr4_3:62492634-62492653 Msa0654310:CDS 50.0%
CAGAACTTCAAGAGCTGGGA+TGG - chr4_3:62492775-62492794 Msa0654310:CDS 50.0%
AGAGCTGGGATGGTCTGATT+TGG - chr4_3:62492785-62492804 Msa0654310:CDS 50.0%
GCTCTAACGTTGAAGCGTGA+GGG - chr4_3:62492951-62492970 Msa0654310:CDS 50.0%
GAAGAACAGGAACTCCTTGC+TGG - chr4_3:62493032-62493051 Msa0654310:CDS 50.0%
CAGAATCTTCAGCACCAGCA+AGG + chr4_3:62493049-62493068 None:intergenic 50.0%
! TTGATGGACCCTGAGTTAGC+TGG - chr4_3:62493218-62493237 Msa0654310:CDS 50.0%
! CCAAAGCACCAGCTAACTCA+GGG + chr4_3:62493229-62493248 None:intergenic 50.0%
! TCCAAAGCACCAGCTAACTC+AGG + chr4_3:62493230-62493249 None:intergenic 50.0%
!! AGCTGGTGCTTTGGAATCAC+TGG - chr4_3:62493235-62493254 Msa0654310:CDS 50.0%
!! GCTGGTGCTTTGGAATCACT+GGG - chr4_3:62493236-62493255 Msa0654310:CDS 50.0%
!! GTGCTTTGGAATCACTGGGT+TGG - chr4_3:62493240-62493259 Msa0654310:CDS 50.0%
! TAATAATGCCGCTTCCACGG+TGG - chr4_3:62493523-62493542 Msa0654310:CDS 50.0%
TGAGCATCAGCTGATGGAGA+TGG - chr4_3:62493667-62493686 Msa0654310:CDS 50.0%
CCACTTCCTTCCTCAACTAG+AGG + chr4_3:62493758-62493777 None:intergenic 50.0%
CCTCTAGTTGAGGAAGGAAG+TGG - chr4_3:62493755-62493774 Msa0654310:CDS 50.0%
CATTCCAACCCAAGTCCGTA+AGG + chr4_3:62493829-62493848 None:intergenic 50.0%
CCCTTCCCGTCTTAAAGCAA+GGG + chr4_3:62494026-62494045 None:intergenic 50.0%
!! CCCTTGCTTTAAGACGGGAA+GGG - chr4_3:62494023-62494042 Msa0654310:CDS 50.0%
TCCCTTCCCGTCTTAAAGCA+AGG + chr4_3:62494027-62494046 None:intergenic 50.0%
GCGCAAGGGAGAAATAGAAG+AGG - chr4_3:62494408-62494427 Msa0654310:intron 50.0%
GGGAGAAATAGAAGAGGCTG+AGG - chr4_3:62494414-62494433 Msa0654310:intron 50.0%
CAGTTGGGCTTCCAGATTCT+TGG + chr4_3:62494455-62494474 None:intergenic 50.0%
CAAGAATCTGGAAGCCCAAC+TGG - chr4_3:62494453-62494472 Msa0654310:intron 50.0%
GCACTCACCTCAGCAGATAA+TGG + chr4_3:62494601-62494620 None:intergenic 50.0%
ATGCATAGAGTGGCCAGTTG+AGG + chr4_3:62494680-62494699 None:intergenic 50.0%
AGCGGGTCCTACTATTCCTT+TGG - chr4_3:62494798-62494817 Msa0654310:intron 50.0%
GTCTTGGCTGAGATTCACTG+AGG + chr4_3:62494827-62494846 None:intergenic 50.0%
AGGCCAAGCTGTTAGAGAAG+AGG - chr4_3:62495055-62495074 Msa0654310:intron 50.0%
GCTGTTAGAGAAGAGGTTGG+AGG - chr4_3:62495062-62495081 Msa0654310:intron 50.0%
AACGGCTTTGCAGCAGCATT+CGG + chr4_3:62495168-62495187 None:intergenic 50.0%
! GCCATCTCTCCGTAGCTTTA+GGG + chr4_3:62495247-62495266 None:intergenic 50.0%
CAGCTTCTGCTTCCTCTGTT+CGG + chr4_3:62495269-62495288 None:intergenic 50.0%
AGCTGAGTTAGAACGGGCAA+AGG - chr4_3:62495284-62495303 Msa0654310:intron 50.0%
GGATGCCGATAAGTCAGATG+CGG - chr4_3:62495341-62495360 Msa0654310:intron 50.0%
! GGTGGATGATGTGAGTGTTG+AGG - chr4_3:62495362-62495381 Msa0654310:intron 50.0%
!! GGGTTCTCGATTTTGGCAAC+GGG + chr4_3:62495489-62495508 None:intergenic 50.0%
AGGAGGCAGGTAAGGTTGCA+CGG + chr4_3:62490609-62490628 None:intergenic 55.0%
CAGCACCACTGTAGAAGGTG+TGG - chr4_3:62491954-62491973 Msa0654310:CDS 55.0%
! GCACCACTGTAGAAGGTGTG+GGG - chr4_3:62491956-62491975 Msa0654310:CDS 55.0%
! CACCACTGTAGAAGGTGTGG+GGG - chr4_3:62491957-62491976 Msa0654310:CDS 55.0%
GCCACTACGACCTTTGTCAC+TGG + chr4_3:62492349-62492368 None:intergenic 55.0%
AGAGAGGGAAGGAGCTTGAG+AGG - chr4_3:62492592-62492611 Msa0654310:CDS 55.0%
CAGGTGAAGAAAAGGGCAGC+CGG - chr4_3:62492892-62492911 Msa0654310:CDS 55.0%
CAGCCGGATTGACAAGACTG+AGG - chr4_3:62492908-62492927 Msa0654310:CDS 55.0%
! GGCTCTAACGTTGAAGCGTG+AGG - chr4_3:62492950-62492969 Msa0654310:CDS 55.0%
CCCTGAGTTAGCTGGTGCTT+TGG - chr4_3:62493226-62493245 Msa0654310:CDS 55.0%
!!! TTTTGGTGCCACCGTGGAAG+CGG + chr4_3:62493534-62493553 None:intergenic 55.0%
GACTTCTACTCGCTGCATGC+AGG + chr4_3:62493736-62493755 None:intergenic 55.0%
CACTCCTTACGGACTTGGGT+TGG - chr4_3:62493822-62493841 Msa0654310:CDS 55.0%
!! GCCCTTGCTTTAAGACGGGA+AGG - chr4_3:62494022-62494041 Msa0654310:CDS 55.0%
AAGACGGGAAGGGAAAACGG+AGG - chr4_3:62494033-62494052 Msa0654310:CDS 55.0%
AGGGAAAACGGAGGATGCAG+AGG - chr4_3:62494042-62494061 Msa0654310:CDS 55.0%
!! GCACTTGCTTTGAGGCGCAA+GGG - chr4_3:62494394-62494413 Msa0654310:intron 55.0%
TTGCTGGTGGAGGCAGTGTT+TGG + chr4_3:62495102-62495121 None:intergenic 55.0%
ACGGCTTTGCAGCAGCATTC+GGG + chr4_3:62495167-62495186 None:intergenic 55.0%
GCCCTAAAGCTACGGAGAGA+TGG - chr4_3:62495243-62495262 Msa0654310:intron 55.0%
GGCCATCTCTCCGTAGCTTT+AGG + chr4_3:62495248-62495267 None:intergenic 55.0%
GGCAATTGAAGCGCAGTTGG+AGG - chr4_3:62495305-62495324 Msa0654310:intron 55.0%
TGAAGCGCAGTTGGAGGAGT+TGG - chr4_3:62495311-62495330 Msa0654310:intron 55.0%
TGCCGATAAGTCAGATGCGG+TGG - chr4_3:62495344-62495363 Msa0654310:intron 55.0%
GACCCCCACACCTTCTACAG+TGG + chr4_3:62491962-62491981 None:intergenic 60.0%
! TTGAGTTGCGACAGGGACGC+AGG - chr4_3:62492087-62492106 Msa0654310:CDS 60.0%
TGAGTTGCGACAGGGACGCA+GGG - chr4_3:62492088-62492107 Msa0654310:CDS 60.0%
CCACGGTGGCACCAAAAAGC+CGG - chr4_3:62493537-62493556 Msa0654310:CDS 60.0%
!! GGCACTTGCTTTGAGGCGCA+AGG - chr4_3:62494393-62494412 Msa0654310:intron 60.0%
AGCCAGGGACGAACTTCGAC+AGG - chr4_3:62495035-62495054 Msa0654310:intron 60.0%
CGGCTTTGCAGCAGCATTCG+GGG + chr4_3:62495166-62495185 None:intergenic 60.0%
ACGGAGAGATGGCCGAACAG+AGG - chr4_3:62495254-62495273 Msa0654310:intron 60.0%
GTTGGAGGAGTTGGCTGCTG+AGG - chr4_3:62495320-62495339 Msa0654310:intron 60.0%
!! GGCACGTCGAAGAGCATCCA+AGG + chr4_3:62495601-62495620 None:intergenic 60.0%
!!! CCGGCTTTTTGGTGCCACCG+TGG + chr4_3:62493540-62493559 None:intergenic 65.0%
GGCCTGTCGAAGTTCGTCCC+TGG + chr4_3:62495040-62495059 None:intergenic 65.0%
TTGCGACAGGGACGCAGGGC+TGG - chr4_3:62492092-62492111 Msa0654310:CDS 70.0%
TGCGACAGGGACGCAGGGCT+GGG - chr4_3:62492093-62492112 Msa0654310:CDS 70.0%
CAGGGACGCAGGGCTGGGAG+AGG - chr4_3:62492098-62492117 Msa0654310:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 62490123 62495977 62490123 ID=Msa0654310;Name=Msa0654310
chr4_3 mRNA 62490123 62495977 62490123 ID=Msa0654310-mRNA-1;Parent=Msa0654310;Name=Msa0654310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=188|1|1|1|1|1|3|312|1229
chr4_3 exon 62490123 62493847 62490123 ID=Msa0654310-mRNA-1:exon:17391;Parent=Msa0654310-mRNA-1
chr4_3 exon 62493981 62494143 62493981 ID=Msa0654310-mRNA-1:exon:17390;Parent=Msa0654310-mRNA-1
chr4_3 exon 62495676 62495977 62495676 ID=Msa0654310-mRNA-1:exon:17389;Parent=Msa0654310-mRNA-1
chr4_3 five_prime_UTR 62495790 62495977 62495790 ID=Msa0654310-mRNA-1:five_prime_utr;Parent=Msa0654310-mRNA-1
chr4_3 CDS 62495676 62495789 62495676 ID=Msa0654310-mRNA-1:cds;Parent=Msa0654310-mRNA-1
chr4_3 CDS 62493981 62494143 62493981 ID=Msa0654310-mRNA-1:cds;Parent=Msa0654310-mRNA-1
chr4_3 CDS 62490435 62493847 62490435 ID=Msa0654310-mRNA-1:cds;Parent=Msa0654310-mRNA-1
chr4_3 three_prime_UTR 62490123 62490434 62490123 ID=Msa0654310-mRNA-1:three_prime_utr;Parent=Msa0654310-mRNA-1
Gene Sequence

>Msa0654310

ATGTTAGCGAAGATCGGGTTGCCACCAAAGCCTTCTTTACGAGGGAATAATTGGGTCGTTGATGCCTCTAATTGCCAGGGTTGTTCCGCTCAATTCACCTTCATCAATCGCAAGCACCACTGTAGAAGGTGTGGGGGTCTATTTTGCGGAAGTTGTACCCAACAAAGAATGGCTTTGCGTGGACAGGGTGATTCGCCTGTACGTATATGTGAACCTTGTAAGAAGCTAGAAGAGGCAGCACGATTTGAGTTGCGACAGGGACGCAGGGCTGGGAGAGGAAGCTTGAAATCAGCACCTAGAGATGAAGATGAAATTCTCAACCAGATTCTTGGTCAAAACGAGGAACTTCTTTTATCAGGAAAGCAATCAACCAGTGACAAAGGTCGTAGTGGCCAGAGATCAGTTAGCGCTGCATCTTCTTCAAGTACTACAGGATTTTCTATTCAGGACGAAGAAGATATACAAAAGATTATATCAACTGAAACAACGAATAGTATGGCTGTTGATGTGGGATCCACCACTCCTGATGAGTTACGTCAGCAAGCTTTAGCGGAAAAAAGTAAGTATAAAATTCTGAAAGGAGACGGGAAATCTGAGGAAGCCTTGAAAGCTTTTAAGAGAGGGAAGGAGCTTGAGAGGCAAGCAGATGCTTTGGAAATTCAGCTAAGGAAAGCGGCTCGGAAAAAGTTGTTGCCTTCTGGAAACATGTCGGATATGCACAACAAAGACATTTCTGTTGAGTCTGGCAGAAAAACAAAGTCACTTCCTCAGACTGGTAAAGATAAGGATGATCTTACTTCAGAACTTCAAGAGCTGGGATGGTCTGATTTGGAACTACACAAAGAAGATAGAAAGTCAGCAAACTTGAGTTTGGAGGGTGAACTCTCCTCCTTGATTGCAGAAACTTTTGCAAAGACAGGTGAAGAAAAGGGCAGCCGGATTGACAAGACTGAGGTTGTTGCTATGAAAAAGAAGGCTCTAACGTTGAAGCGTGAGGGTAAGCTTGCAGAAGCTAAAGAGGAATTGAAAAAAGCAAAAATCCTAGAGAAGCAACTGGAAGAACAGGAACTCCTTGCTGGTGCTGAAGATTCTGATGATGAGCTATCAGCATTAATACGCGGCATGGATGATGATGATAAAGAATTTCCAAATCTGCATGATCATGAGCATGGTTTTGATTTTGATAATCTCTTGGCCATTTCTGATAATCTTGATGGTAATTTAGAAGTGACCGATGAGGATTTGATGGACCCTGAGTTAGCTGGTGCTTTGGAATCACTGGGTTGGACTGAACCTGAAAATACATTTTCCAAATCTCAAACCTTTGACAAAGAAGCGTTGCTAAGTGAAATTCAGTCATTGAAAAGAGAGGCTCTTAATCAAAAGCGAGCAGGTAATACTGAAGAAGCAATGGCGATATTGAAAAAGGCGAAGTTATTAGAAAGTGACTTAAACAACACTGGGTCTGATGACGATAATACTATGTTGCAAAAAGTTACTCCTGTTGGGAAAAGTTTGAGTTCTGAAATTACTGGTAATGATAGAAATAATAATGCCGCTTCCACGGTGGCACCAAAAAGCCGGTTGATGATTCAAAGAGAGCTTTTGAATTCGAAAAAGAAGGTTCTTGCATTGAGAAGGGAAGGGAAAATGGATGAAGCAGAAGAAGAAATGCGGAAGAGTGCAGTTCTTGAGCATCAGCTGATGGAGATGGACAATGCTCCGAGTCAATCATCATCGACGAATACTGGTAATGTCCTGCATGCAGCGAGTAGAAGTCCTCTAGTTGAGGAAGGAAGTGGCGATGATGTAACAGATAAAGATATGTCTGATCCAGCATATCTTTCACTCCTTACGGACTTGGGTTGGAATGATGACAATGATAAACCTTCTAAATCTTCGAACAATCCTTCGAAGACATATGATGATAACTTTGTTCCAGTTGATGATACTTTTCTGAGTAAGCATTCTACAACTATGTTTGTTGAAGCACCAAGAAAAAGTAAAGCAGAAATTCAGAGGGAACTCTTGAGCTTAAAAAGAAAGGCCCTTGCTTTAAGACGGGAAGGGAAAACGGAGGATGCAGAGGAAGTCCTTAAAATGGCCAAAACATTGGAAGCCAAGATAGAAGAGATGGATGCTCTGAAGAATAATGTACAGGTTGAGGCTCTTAAGAAGAAAGAACTCTTCAATTCTCCAGTTGATGTGGCAGTTGATGAAGAAAGGGACATGGTTGTTTCAGAAGAGGATATGCATGACCCAGCATTGAATTCAATGCTTACTAATCTAGGATGGAAGGATGAAGGATTTGAGCCCGTGACCATAAAAGAAGAACCTGTTAAGGAAGCTACTAGTACTGTCACAACTTCAAGGAACAAAGGAGAGATTCAAAGAGAACTCTTAGCGTTGAAAAGGAAGGCACTTGCTTTGAGGCGCAAGGGAGAAATAGAAGAGGCTGAGGAAATTTTAAAAAAGGCCAAGAATCTGGAAGCCCAACTGGAAGATTTTGAGAGCCAAAACAAGGACTTGTTGCTGAATGCATCCAAGGATAAAAAATCTGTTCCGTCTGAATCATCTCACGGAAAAAGTCCTGCAAACTCCCATTTTGCACATGATGAGCATCCATTATCTGCTGAGGTGAGTGCTTCAAGTGAAAATCTCACAAAAAGGATGAAAGTCGAAAATATCATTGCTCATAGCTCCTCAACTGGCCACTCTATGCATATGCCAGATCTACTTACTGGTAATGGCTGTAGCAGTTCTGAAATTTTGTCTCAAAAACAAAAAGAAGAATATAAAGCAGGTTCAGTTAATTCATCTCAAGCGGGTCCTACTATTCCTTTGGACTCCTCAGTGAATCTCAGCCAAGACCAGATATACAAAAACAACATTCAAACCCAAAGAAGAAAAGAAGTGACTGATGTTGATGAAAAGCCAAACACAAACCAGTCAAATGTTGTTCCAGATTATGCTTCTCAGGACGACCTTTCTTTGCGTCAAGAAATTTTGGCTCATAAAAGGAAGGCAGTTGCTTTGAAAAGAGAAGGAAAACTAACAGAAGCCAGGGACGAACTTCGACAGGCCAAGCTGTTAGAGAAGAGGTTGGAGGATGGAAGTATGCAGCCAAACACTGCCTCCACCAGCAATGTTTCCAACACATCAAATGTTGTTCAAAAGAAACAAGATTCCCCGAATGCTGCTGCAAAGCCGTTTACTAGTCGTGACCGTTTCAAGTTGCAACAGGAGTCTCTAGCACACAAACGTCAAGCCCTAAAGCTACGGAGAGATGGCCGAACAGAGGAAGCAGAAGCTGAGTTAGAACGGGCAAAGGCAATTGAAGCGCAGTTGGAGGAGTTGGCTGCTGAGGATGCCGATAAGTCAGATGCGGTGGATGATGTGAGTGTTGAGGATTTTCTTGACCCTCAACTCTTATCTGCTCTGAAAGCTACTGGACTTGCAGATTTAACTGTTGTATCTAATAAAAGCCCAGAAAAACATGAGACTGTGAAACCCGTTGCCAAAATCGAGAACCCTAACCAAGAGAAAATTCAGCTAGAAGAAAGAATTAAAGAAGAAAAACTGAAGGCGGTTAGTTTGAAACGATCAGGAAAACAAGCTGAAGCCTTGGATGCTCTTCGACGTGCCAAAATGTATGAAAAGAAGCTGAATTCATTGTTAACATCTGGGTGA
Protein sequence

>Msa0654310

MLAKIGLPPKPSLRGNNWVVDASNCQGCSAQFTFINRKHHCRRCGGLFCGSCTQQRMALRGQGDSPVRICEPCKKLEEAARFELRQGRRAGRGSLKSAPRDEDEILNQILGQNEELLLSGKQSTSDKGRSGQRSVSAASSSSTTGFSIQDEEDIQKIISTETTNSMAVDVGSTTPDELRQQALAEKSKYKILKGDGKSEEALKAFKRGKELERQADALEIQLRKAARKKLLPSGNMSDMHNKDISVESGRKTKSLPQTGKDKDDLTSELQELGWSDLELHKEDRKSANLSLEGELSSLIAETFAKTGEEKGSRIDKTEVVAMKKKALTLKREGKLAEAKEELKKAKILEKQLEEQELLAGAEDSDDELSALIRGMDDDDKEFPNLHDHEHGFDFDNLLAISDNLDGNLEVTDEDLMDPELAGALESLGWTEPENTFSKSQTFDKEALLSEIQSLKREALNQKRAGNTEEAMAILKKAKLLESDLNNTGSDDDNTMLQKVTPVGKSLSSEITGNDRNNNAASTVAPKSRLMIQRELLNSKKKVLALRREGKMDEAEEEMRKSAVLEHQLMEMDNAPSQSSSTNTGNVLHAASRSPLVEEGSGDDVTDKDMSDPAYLSLLTDLGWNDDNDKPSKSSNNPSKTYDDNFVPVDDTFLSKHSTTMFVEAPRKSKAEIQRELLSLKRKALALRREGKTEDAEEVLKMAKTLEAKIEEMDALKNNVQVEALKKKELFNSPVDVAVDEERDMVVSEEDMHDPALNSMLTNLGWKDEGFEPVTIKEEPVKEATSTVTTSRNKGEIQRELLALKRKALALRRKGEIEEAEEILKKAKNLEAQLEDFESQNKDLLLNASKDKKSVPSESSHGKSPANSHFAHDEHPLSAEVSASSENLTKRMKVENIIAHSSSTGHSMHMPDLLTGNGCSSSEILSQKQKEEYKAGSVNSSQAGPTIPLDSSVNLSQDQIYKNNIQTQRRKEVTDVDEKPNTNQSNVVPDYASQDDLSLRQEILAHKRKAVALKREGKLTEARDELRQAKLLEKRLEDGSMQPNTASTSNVSNTSNVVQKKQDSPNAAAKPFTSRDRFKLQQESLAHKRQALKLRRDGRTEEAEAELERAKAIEAQLEELAAEDADKSDAVDDVSVEDFLDPQLLSALKATGLADLTVVSNKSPEKHETVKPVAKIENPNQEKIQLEERIKEEKLKAVSLKRSGKQAEALDALRRAKMYEKKLNSLLTSG*