Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450180 | XP_013461062.1 | 90.909 | 627 | 40 | 3 | 1 | 619 | 1 | 618 | 0.0 | 1173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450180 | sp|Q9SU72|EDS1C_ARATH | 38.820 | 644 | 313 | 15 | 13 | 614 | 9 | 613 | 5.25e-139 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450180 | A0A072V056 | 90.909 | 627 | 40 | 3 | 1 | 619 | 1 | 618 | 0.0 | 1173 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0371460 | Msa0450180 | 0.928725 | 1.923124e-92 | -8.615850e-47 |
| Msa0419670 | Msa0450180 | 0.867679 | 1.145675e-65 | -8.615850e-47 |
| Msa0450180 | Msa0511620 | 0.913402 | 6.413485e-84 | -8.615850e-47 |
| Msa0450180 | Msa0786980 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0450180 | Msa0822350 | 0.820040 | 8.461906e-53 | -8.615850e-47 |
| Msa0450180 | Msa1084640 | 0.810609 | 1.058585e-50 | -8.615850e-47 |
| Msa0450180 | Msa1400340 | 0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa0450180 | Msa1416730 | 0.812928 | 3.312353e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450180 | MtrunA17_Chr3g0118251 | 90.909 | 627 | 40 | 3 | 1 | 619 | 1 | 618 | 0.0 | 1173 |
| Msa0450180 | MtrunA17_Chr3g0118541 | 50.641 | 624 | 272 | 13 | 13 | 619 | 22 | 626 | 0.0 | 585 |
| Msa0450180 | MtrunA17_Chr8g0384621 | 25.040 | 619 | 361 | 24 | 34 | 603 | 43 | 607 | 2.85e-47 | 176 |
| Msa0450180 | MtrunA17_Chr3g0107671 | 26.593 | 361 | 203 | 17 | 272 | 600 | 209 | 539 | 1.64e-20 | 95.5 |
| Msa0450180 | MtrunA17_Chr6g0451541 | 24.090 | 357 | 220 | 13 | 271 | 600 | 210 | 542 | 1.49e-18 | 89.4 |
| Msa0450180 | MtrunA17_Chr6g0451561 | 24.194 | 372 | 194 | 15 | 274 | 601 | 213 | 540 | 1.55e-15 | 80.1 |
| Msa0450180 | MtrunA17_Chr6g0451531 | 24.586 | 362 | 213 | 15 | 271 | 601 | 210 | 542 | 2.85e-15 | 79.3 |
| Msa0450180 | MtrunA17_Chr6g0451511 | 23.398 | 359 | 222 | 13 | 272 | 602 | 209 | 542 | 4.78e-14 | 75.1 |
| Msa0450180 | MtrunA17_Chr8g0338691 | 41.379 | 87 | 48 | 1 | 112 | 195 | 225 | 311 | 3.88e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450180 | AT3G48090.1 | 38.820 | 644 | 313 | 15 | 13 | 614 | 9 | 613 | 5.34e-140 | 421 |
| Msa0450180 | AT3G48080.1 | 37.255 | 612 | 317 | 15 | 35 | 608 | 29 | 611 | 6.50e-129 | 393 |
| Msa0450180 | AT3G48090.2 | 41.035 | 541 | 244 | 12 | 112 | 614 | 2 | 505 | 1.39e-127 | 385 |
| Msa0450180 | AT3G52430.1 | 26.316 | 304 | 178 | 11 | 264 | 543 | 175 | 456 | 3.66e-23 | 103 |
| Msa0450180 | AT3G52430.1 | 44.000 | 75 | 38 | 2 | 119 | 193 | 112 | 182 | 6.75e-11 | 65.5 |
| Msa0450180 | AT5G14930.2 | 27.706 | 231 | 127 | 9 | 398 | 602 | 293 | 509 | 1.23e-13 | 74.3 |
Find 136 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATATCTTTGAATCTT+TGG | 0.137148 | 3_3:+35524704 | None:intergenic |
| CCAAAGATTCAAAGATATTT+TGG | 0.139370 | 3_3:-35524704 | Msa0450180:CDS |
| GTTACTCAGAATCATGTTTA+TGG | 0.160363 | 3_3:-35522083 | Msa0450180:CDS |
| TAATGCATGATTGTTCTTTA+TGG | 0.162207 | 3_3:+35521860 | None:intergenic |
| GGGATACGATCGGAAGATTT+TGG | 0.194261 | 3_3:+35523924 | None:intergenic |
| CCTCCCATCTGCATTACTTT+TGG | 0.239470 | 3_3:-35523903 | Msa0450180:CDS |
| GGCTATTCTGGCAACACTTT+GGG | 0.244937 | 3_3:-35523967 | Msa0450180:CDS |
| GTCATTTAAGGCTATGTTAA+TGG | 0.251285 | 3_3:+35523269 | None:intergenic |
| GCTCATGAATGATTTGCTTT+TGG | 0.251739 | 3_3:+35523713 | None:intergenic |
| ATGCTACAAGGAGAGAAAAT+TGG | 0.262993 | 3_3:-35523848 | Msa0450180:CDS |
| CTTTGTTTGGTTATGTAATA+AGG | 0.263679 | 3_3:-35521717 | Msa0450180:three_prime_UTR |
| GGCTAGAACTTGCAGGAGTA+TGG | 0.273354 | 3_3:-35522344 | Msa0450180:CDS |
| TACCAGGCCAAGGTCATTTA+AGG | 0.278195 | 3_3:+35523257 | None:intergenic |
| TCGTTCCCTTCTAAGTCTTC+TGG | 0.280228 | 3_3:+35522285 | None:intergenic |
| TGGTGGTCCAGTGGCTATTC+TGG | 0.280884 | 3_3:-35523979 | Msa0450180:CDS |
| CCGTGATGGACGTGTTTATA+TGG | 0.287982 | 3_3:-35522181 | Msa0450180:CDS |
| GGCTGATAAGGATGTGTTTA+AGG | 0.289164 | 3_3:-35521938 | Msa0450180:CDS |
| ACATTTGCTTGGAAATCTTC+CGG | 0.306152 | 3_3:+35522372 | None:intergenic |
| AGTTTCACCAAAAGTTGTTT+TGG | 0.309827 | 3_3:+35524804 | None:intergenic |
| TGGTTTCTTGTGAGCCTTCA+AGG | 0.321792 | 3_3:+35524909 | None:intergenic |
| TGGTATTCCAAAACAACTTT+TGG | 0.322409 | 3_3:-35524811 | Msa0450180:CDS |
| TTGTCTGAGCATACTACTTC+AGG | 0.335540 | 3_3:-35523306 | Msa0450180:CDS |
| TCTTTGGTCTGTGGAAAGTA+TGG | 0.349731 | 3_3:+35525065 | None:intergenic |
| TGTCATATCTCATCACAAAA+TGG | 0.352184 | 3_3:+35523811 | None:intergenic |
| CATCAGGTGCTTTCAAAGAT+TGG | 0.360920 | 3_3:-35524831 | Msa0450180:CDS |
| GAACTTCCAGAAGACTTAGA+AGG | 0.361685 | 3_3:-35522291 | Msa0450180:CDS |
| ACTTAGAAGGGAACGAAGAT+TGG | 0.364202 | 3_3:-35522278 | Msa0450180:CDS |
| TTACTCAGAATCATGTTTAT+GGG | 0.367047 | 3_3:-35522082 | Msa0450180:CDS |
| ACATGCTGCTTGTAGGCTAA+TGG | 0.368160 | 3_3:-35523613 | Msa0450180:CDS |
| CATTTGCTTGGAAATCTTCC+GGG | 0.374664 | 3_3:+35522373 | None:intergenic |
| TAAGTTCCAAAGGGTCTATA+AGG | 0.375128 | 3_3:+35523540 | None:intergenic |
| TTGAGTCCTTATAGACCCTT+TGG | 0.379079 | 3_3:-35523546 | Msa0450180:CDS |
| AGAGGAGCTAGGAGGATTCT+TGG | 0.379820 | 3_3:+35523783 | None:intergenic |
| TAGAAGACTAGTTGAGCCTT+TGG | 0.383000 | 3_3:-35522235 | Msa0450180:CDS |
| TCACAAGACATGCTGCTTGT+AGG | 0.383836 | 3_3:-35523620 | Msa0450180:CDS |
| GTTGGATCATGCACTTTGTT+TGG | 0.384787 | 3_3:-35521730 | Msa0450180:three_prime_UTR |
| TCAAGCAGCTGCAGCATTAG+AGG | 0.386121 | 3_3:-35522535 | Msa0450180:CDS |
| GTCATTTGATGCGTCCTTGA+AGG | 0.386377 | 3_3:-35524923 | Msa0450180:CDS |
| CTAAAGGAGGAAGGCCAAAA+AGG | 0.396329 | 3_3:-35522158 | Msa0450180:CDS |
| CATGCTGCTTGTAGGCTAAT+GGG | 0.400385 | 3_3:-35523612 | Msa0450180:CDS |
| TCTAGAAGGTAGTGTCTCTC+TGG | 0.408942 | 3_3:+35524889 | None:intergenic |
| ATCATCAGCTTTCCAGCATC+AGG | 0.410129 | 3_3:-35524847 | Msa0450180:CDS |
| TGGCTATTCTGGCAACACTT+TGG | 0.417209 | 3_3:-35523968 | Msa0450180:CDS |
| TGCTACAAGGAGAGAAAATT+GGG | 0.419960 | 3_3:-35523847 | Msa0450180:CDS |
| TCACATTTATTACACAATAT+AGG | 0.422806 | 3_3:+35521682 | None:intergenic |
| ACATCATCAAAAGGCTTGTC+AGG | 0.423403 | 3_3:+35522033 | None:intergenic |
| AACGAAGATTGGATTAAGAT+AGG | 0.426436 | 3_3:-35522267 | Msa0450180:CDS |
| GTACAGAGGCTAGAACTTGC+AGG | 0.431181 | 3_3:-35522351 | Msa0450180:CDS |
| CTAGCCTCTGTACATTTGCT+TGG | 0.431295 | 3_3:+35522361 | None:intergenic |
| TGTTGTGTACTTAGACCAAC+TGG | 0.432263 | 3_3:-35523340 | Msa0450180:CDS |
| TGAGAAAGATGAGGCTGATA+AGG | 0.436169 | 3_3:-35521950 | Msa0450180:CDS |
| CTAATTACTATAGACATTCA+AGG | 0.443986 | 3_3:-35522206 | Msa0450180:CDS |
| ATTATACTAATATAGTACTT+TGG | 0.447774 | 3_3:-35521778 | Msa0450180:three_prime_UTR |
| TAAGGAAAAGGTTGAGGCAT+TGG | 0.451260 | 3_3:-35522010 | Msa0450180:CDS |
| AAGAAGCAGATAGTGTTTGC+AGG | 0.453653 | 3_3:-35524011 | Msa0450180:CDS |
| ATGACCTGCAGAATTGCATC+AGG | 0.455008 | 3_3:+35523465 | None:intergenic |
| TTTCGTTCACTTAAAAGCAT+TGG | 0.464216 | 3_3:-35524763 | Msa0450180:CDS |
| GATTGTTCTTTATGGTCTGT+TGG | 0.470082 | 3_3:+35521868 | None:intergenic |
| TCTTTGAAAGCACCTGATGC+TGG | 0.472238 | 3_3:+35524835 | None:intergenic |
| CAATGAATATGTAGGTGGAT+AGG | 0.474650 | 3_3:-35524046 | Msa0450180:intron |
| GGAAAAGGTTGAGGCATTGG+AGG | 0.475367 | 3_3:-35522007 | Msa0450180:CDS |
| AATGAATATGTAGGTGGATA+GGG | 0.479173 | 3_3:-35524045 | Msa0450180:intron |
| CATTATGAGAAGAGGGATGA+AGG | 0.484238 | 3_3:-35522108 | Msa0450180:CDS |
| AGGTTATTACGATGCATTCA+AGG | 0.484769 | 3_3:-35522406 | Msa0450180:CDS |
| AATATGTGATTTCCAACTAA+AGG | 0.485127 | 3_3:+35523876 | None:intergenic |
| TGGATTCTACGTTTGTTAAG+TGG | 0.487040 | 3_3:-35521903 | Msa0450180:CDS |
| AACATAGCCTTAAATGACCT+TGG | 0.489141 | 3_3:-35523264 | Msa0450180:CDS |
| GTGTTTGCAGGACATTCGTC+TGG | 0.491091 | 3_3:-35523999 | Msa0450180:CDS |
| TGCACTACAAGTGGCGATGA+AGG | 0.491111 | 3_3:-35523510 | Msa0450180:CDS |
| GCAGAAAATGTAAGTTCCAA+AGG | 0.507553 | 3_3:+35523530 | None:intergenic |
| GTTGGAACATTATGAGAAGA+GGG | 0.510509 | 3_3:-35522115 | Msa0450180:CDS |
| TTCATGAGCGAATCGAGTCT+TGG | 0.516950 | 3_3:-35523699 | Msa0450180:CDS |
| GAAGTAGTATGCTCAGACAA+AGG | 0.517071 | 3_3:+35523309 | None:intergenic |
| CCAGTTCAAAATGTTGTCGC+AGG | 0.517117 | 3_3:+35523385 | None:intergenic |
| AATTGGCCAACTGGCCAACC+AGG | 0.519323 | 3_3:-35525180 | None:intergenic |
| AGTGTGAGCTATAGTGCAGT+TGG | 0.524340 | 3_3:-35521748 | Msa0450180:three_prime_UTR |
| AGATAGCCGCTGTGGAGGAT+AGG | 0.526622 | 3_3:-35522476 | Msa0450180:CDS |
| TGGTAACAATGAAGCTGCTA+AGG | 0.528491 | 3_3:-35524743 | Msa0450180:CDS |
| TGATGTTAAGGAAAAGGTTG+AGG | 0.529296 | 3_3:-35522016 | Msa0450180:CDS |
| CACAGGTGCTGCCTATCCAC+TGG | 0.531926 | 3_3:-35521817 | Msa0450180:three_prime_UTR |
| GCTAGAACTTGCAGGAGTAT+GGG | 0.533503 | 3_3:-35522343 | Msa0450180:CDS |
| AAACCCTGATGCAATTCTGC+AGG | 0.542505 | 3_3:-35523469 | Msa0450180:CDS |
| ATTCTACGTTTGTTAAGTGG+TGG | 0.545586 | 3_3:-35521900 | Msa0450180:CDS |
| GGACGTGTTTATATGGCTAA+AGG | 0.547868 | 3_3:-35522174 | Msa0450180:CDS |
| AGCCTTAAATGACCTTGGCC+TGG | 0.548198 | 3_3:-35523259 | Msa0450180:intron |
| TAGGTATACACAAAGATGGT+TGG | 0.548252 | 3_3:-35522133 | Msa0450180:CDS |
| GGAGGATAGGATGAAAGCAC+TGG | 0.548822 | 3_3:-35522463 | Msa0450180:CDS |
| TCATCACAAAATGGAAGAAG+TGG | 0.551943 | 3_3:+35523820 | None:intergenic |
| CAGAAAATGTAAGTTCCAAA+GGG | 0.551969 | 3_3:+35523531 | None:intergenic |
| CGAAAGAAGATAGAGGAGCT+AGG | 0.552232 | 3_3:+35523772 | None:intergenic |
| ATCATGTTTATGGGCTGAAG+TGG | 0.554848 | 3_3:-35522073 | Msa0450180:CDS |
| AACTTCCAGAAGACTTAGAA+GGG | 0.561390 | 3_3:-35522290 | Msa0450180:CDS |
| GGTATAGGTATACACAAAGA+TGG | 0.561423 | 3_3:-35522137 | Msa0450180:CDS |
| AAGCTCTGAAGAAGAAGCTG+AGG | 0.562108 | 3_3:-35523424 | Msa0450180:CDS |
| GGTTGGAACATTATGAGAAG+AGG | 0.569597 | 3_3:-35522116 | Msa0450180:CDS |
| ATGTTTATGGGCTGAAGTGG+AGG | 0.574694 | 3_3:-35522070 | Msa0450180:CDS |
| CAAAAGTAATGCAGATGGGA+GGG | 0.576141 | 3_3:+35523904 | None:intergenic |
| AAGCTGATGATAACTTCTGA+AGG | 0.579352 | 3_3:+35524859 | None:intergenic |
| AAAAGCATATGTCTTCAACT+TGG | 0.579608 | 3_3:-35525106 | Msa0450180:five_prime_UTR |
| ACACACATGGCTTCATCAAG+AGG | 0.586314 | 3_3:-35524988 | Msa0450180:exon |
| AGAACCAAAAGTAATGCAGA+TGG | 0.587556 | 3_3:+35523899 | None:intergenic |
| TGGAGGAATTTATAAGCAAG+TGG | 0.588253 | 3_3:-35521990 | Msa0450180:CDS |
| AAGGGTCTATAAGGACTCAA+AGG | 0.589494 | 3_3:+35523549 | None:intergenic |
| TTATAACTGCATTAATCCAG+TGG | 0.589743 | 3_3:+35521801 | None:intergenic |
| AAAGTCATCACTTGAAGATG+AGG | 0.590426 | 3_3:-35524680 | Msa0450180:intron |
| ACTGCATTAATCCAGTGGAT+AGG | 0.595951 | 3_3:+35521806 | None:intergenic |
| TTTGCAGGACATTCGTCTGG+TGG | 0.596333 | 3_3:-35523996 | Msa0450180:CDS |
| ACAAAAGATAGCCGCTGTGG+AGG | 0.604033 | 3_3:-35522481 | Msa0450180:CDS |
| CAGCTGCAGCATTAGAGGAA+CGG | 0.605468 | 3_3:-35522530 | Msa0450180:CDS |
| AAAGGTTGCATACCAGGCCA+AGG | 0.614366 | 3_3:+35523247 | None:intergenic |
| AGTGTTGCCAGAATAGCCAC+TGG | 0.614618 | 3_3:+35523972 | None:intergenic |
| GGACAGTTACAGAGAAACGC+GGG | 0.617330 | 3_3:-35522442 | Msa0450180:CDS |
| CGTGTTTATATGGCTAAAGG+AGG | 0.625592 | 3_3:-35522171 | Msa0450180:CDS |
| TTTATATGGCTAAAGGAGGA+AGG | 0.625809 | 3_3:-35522167 | Msa0450180:CDS |
| CCAAAAGTAATGCAGATGGG+AGG | 0.626384 | 3_3:+35523903 | None:intergenic |
| CCATATAAACACGTCCATCA+CGG | 0.630887 | 3_3:+35522181 | None:intergenic |
| GTCTTGTTGAAGTGTGACAC+AGG | 0.632853 | 3_3:-35521834 | Msa0450180:exon |
| TATGAGAAGAGGGATGAAGG+TGG | 0.634440 | 3_3:-35522105 | Msa0450180:CDS |
| ACATTCGTCTGGTGGTCCAG+TGG | 0.641872 | 3_3:-35523988 | Msa0450180:CDS |
| AGACATTCAAGGAACCGTGA+TGG | 0.644212 | 3_3:-35522195 | Msa0450180:CDS |
| GAACCAAAAGTAATGCAGAT+GGG | 0.645149 | 3_3:+35523900 | None:intergenic |
| AGATGAGGCTGAGAAAGATG+AGG | 0.658970 | 3_3:-35521959 | Msa0450180:CDS |
| TCTGAGCATACTACTTCAGG+TGG | 0.659119 | 3_3:-35523303 | Msa0450180:CDS |
| TGAGCTATATCTTGTTTGTG+AGG | 0.662845 | 3_3:-35521662 | Msa0450180:three_prime_UTR |
| GCAGATGGGAGGGATACGAT+CGG | 0.665165 | 3_3:+35523914 | None:intergenic |
| TAGTAATTAGCAATATCCAA+AGG | 0.665329 | 3_3:+35522219 | None:intergenic |
| TGACCTGCAGAATTGCATCA+GGG | 0.674595 | 3_3:+35523466 | None:intergenic |
| GCTACAAAAGATAGCCGCTG+TGG | 0.677260 | 3_3:-35522484 | Msa0450180:CDS |
| CACATGGCTTCATCAAGAGG+TGG | 0.677661 | 3_3:-35524985 | Msa0450180:CDS |
| ATTCAAGGATCAATTAGACC+CGG | 0.679489 | 3_3:-35522391 | Msa0450180:CDS |
| ATTTCCAAGCAAATGTACAG+AGG | 0.698435 | 3_3:-35522365 | Msa0450180:CDS |
| AAGAAGATAGAGGAGCTAGG+AGG | 0.700489 | 3_3:+35523775 | None:intergenic |
| TGGACAGTTACAGAGAAACG+CGG | 0.726781 | 3_3:-35522443 | Msa0450180:CDS |
| CAAGTGGCATGAGAAAGATG+AGG | 0.734716 | 3_3:-35521974 | Msa0450180:CDS |
| GACAGTTACAGAGAAACGCG+GGG | 0.746046 | 3_3:-35522441 | Msa0450180:CDS |
| TTTCATCCTATCCTCCACAG+CGG | 0.790893 | 3_3:+35522470 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTATCATATTGTTT+AGG | + | chr3_3:35521659-35521678 | None:intergenic | 15.0% |
| !!! | ACAAAATTAATTTTCAACTT+AGG | + | chr3_3:35522348-35522367 | None:intergenic | 15.0% |
| !! | AAAAACATATTTAATAACTC+AGG | - | chr3_3:35522582-35522601 | Msa0450180:intron | 15.0% |
| !! | ATATATTTCAATGAATATGT+AGG | - | chr3_3:35522726-35522745 | Msa0450180:intron | 15.0% |
| !! | ATATGAGTATATAAAGTAAA+AGG | + | chr3_3:35523634-35523653 | None:intergenic | 15.0% |
| !! | ATTATACTAATATAGTACTT+TGG | - | chr3_3:35525002-35525021 | Msa0450180:exon | 15.0% |
| !! | TTAAGTATAGATGCTATAAA+AGG | + | chr3_3:35522204-35522223 | None:intergenic | 20.0% |
| !!! | AAACTAATATTGAGTTGTTT+TGG | + | chr3_3:35522255-35522274 | None:intergenic | 20.0% |
| !!! | AATGTCATGTATAATTTGTT+GGG | - | chr3_3:35522505-35522524 | Msa0450180:CDS | 20.0% |
| !! | GTAGTAATTTATTAGACATA+AGG | + | chr3_3:35523774-35523793 | None:intergenic | 20.0% |
| !! | GTAGTAATTTATTAGACATA+AGG | + | chr3_3:35523774-35523793 | None:intergenic | 20.0% |
| !! | CATAATCAGATATAATTGAA+TGG | - | chr3_3:35523961-35523980 | Msa0450180:CDS | 20.0% |
| !! | TCACATTTATTACACAATAT+AGG | + | chr3_3:35525101-35525120 | None:intergenic | 20.0% |
| !!! | TTAACTCCTTGTTTTTTCTT+TGG | + | chr3_3:35521734-35521753 | None:intergenic | 25.0% |
| ! | CCAAAATATCTTTGAATCTT+TGG | + | chr3_3:35522079-35522098 | None:intergenic | 25.0% |
| !! | CCAAAGATTCAAAGATATTT+TGG | - | chr3_3:35522076-35522095 | Msa0450180:CDS | 25.0% |
| !!! | CATTTTTAGCATTAAGGATA+GGG | + | chr3_3:35522230-35522249 | None:intergenic | 25.0% |
| !!! | TCATTTTTAGCATTAAGGAT+AGG | + | chr3_3:35522231-35522250 | None:intergenic | 25.0% |
| !!! | TTGGTTCATTTTTAGCATTA+AGG | + | chr3_3:35522236-35522255 | None:intergenic | 25.0% |
| ! | TTAACATTAGAGACTCAATT+AGG | - | chr3_3:35522274-35522293 | Msa0450180:CDS | 25.0% |
| !! | CAATGTCATGTATAATTTGT+TGG | - | chr3_3:35522504-35522523 | Msa0450180:CDS | 25.0% |
| !!! | ATCACATGGATTTGTTAAAA+AGG | - | chr3_3:35522670-35522689 | Msa0450180:intron | 25.0% |
| ! | TATTTCAATGAATATGTAGG+TGG | - | chr3_3:35522729-35522748 | Msa0450180:intron | 25.0% |
| ! | AATATGTGATTTCCAACTAA+AGG | + | chr3_3:35522907-35522926 | None:intergenic | 25.0% |
| ! | TTTGAACTGGTAAAAAACTT+TGG | - | chr3_3:35523408-35523427 | Msa0450180:CDS | 25.0% |
| !!! | CTTTAAAATCGCCAAAAATA+GGG | + | chr3_3:35523565-35523584 | None:intergenic | 25.0% |
| !!! | ACTTTAAAATCGCCAAAAAT+AGG | + | chr3_3:35523566-35523585 | None:intergenic | 25.0% |
| ! | AATCAGATATGTCACTAATA+TGG | + | chr3_3:35523678-35523697 | None:intergenic | 25.0% |
| ! | AATCAGATATGTCACTAATA+TGG | + | chr3_3:35523678-35523697 | None:intergenic | 25.0% |
| ! | TCTCATGTATTATGTATGAT+AGG | + | chr3_3:35524040-35524059 | None:intergenic | 25.0% |
| !!! | TGCTATTTTTTCATGTTCAA+TGG | + | chr3_3:35524152-35524171 | None:intergenic | 25.0% |
| ! | TAGTAATTAGCAATATCCAA+AGG | + | chr3_3:35524564-35524583 | None:intergenic | 25.0% |
| ! | CTAATTACTATAGACATTCA+AGG | - | chr3_3:35524574-35524593 | Msa0450180:intron | 25.0% |
| ! | TTACTCAGAATCATGTTTAT+GGG | - | chr3_3:35524698-35524717 | Msa0450180:CDS | 25.0% |
| !! | TTTTCCTTAACATCATCAAA+AGG | + | chr3_3:35524759-35524778 | None:intergenic | 25.0% |
| !!! | TTTTGATGATGTTAAGGAAA+AGG | - | chr3_3:35524758-35524777 | Msa0450180:CDS | 25.0% |
| ! | TAATGCATGATTGTTCTTTA+TGG | + | chr3_3:35524923-35524942 | None:intergenic | 25.0% |
| !! | CTTTGTTTGGTTATGTAATA+AGG | - | chr3_3:35525063-35525082 | Msa0450180:five_prime_UTR | 25.0% |
| !!! | TACAGTCTCAGTTTTTTAAT+AGG | - | chr3_3:35525167-35525186 | Msa0450180:five_prime_UTR | 25.0% |
| TTGACTTAAAAACTTGAACC+TGG | + | chr3_3:35521621-35521640 | None:intergenic | 30.0% | |
| ! | AAAAGCATATGTCTTCAACT+TGG | - | chr3_3:35521674-35521693 | Msa0450180:three_prime_UTR | 30.0% |
| ! | TGGTATTCCAAAACAACTTT+TGG | - | chr3_3:35521969-35521988 | Msa0450180:CDS | 30.0% |
| ! | AGTTTCACCAAAAGTTGTTT+TGG | + | chr3_3:35521979-35521998 | None:intergenic | 30.0% |
| ! | TTTCGTTCACTTAAAAGCAT+TGG | - | chr3_3:35522017-35522036 | Msa0450180:CDS | 30.0% |
| TTTGCATAACTAGATACACA+TGG | + | chr3_3:35522160-35522179 | None:intergenic | 30.0% | |
| ATTTGATTCATGTACCAAGT+TGG | + | chr3_3:35522312-35522331 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTAGTCCCTCTTTA+AGG | - | chr3_3:35522468-35522487 | Msa0450180:CDS | 30.0% |
| ! | ATACTTTTGGTCCTTAAAGA+GGG | + | chr3_3:35522482-35522501 | None:intergenic | 30.0% |
| ! | ACATGACATTGACATACTTT+TGG | + | chr3_3:35522495-35522514 | None:intergenic | 30.0% |
| TGACACTATCAAATATCACA+TGG | - | chr3_3:35522656-35522675 | Msa0450180:intron | 30.0% | |
| AATGAATATGTAGGTGGATA+GGG | - | chr3_3:35522735-35522754 | Msa0450180:intron | 30.0% | |
| ! | ACATATTTTCTCATGCTACA+AGG | - | chr3_3:35522920-35522939 | Msa0450180:intron | 30.0% |
| TGTCATATCTCATCACAAAA+TGG | + | chr3_3:35522972-35522991 | None:intergenic | 30.0% | |
| ! | GTGCAACTGTTTCAAATTTT+TGG | + | chr3_3:35523035-35523054 | None:intergenic | 30.0% |
| !!! | CTCATGAATGATTTGCTTTT+GGG | + | chr3_3:35523069-35523088 | None:intergenic | 30.0% |
| CAGAAAATGTAAGTTCCAAA+GGG | + | chr3_3:35523252-35523271 | None:intergenic | 30.0% | |
| ! | GTCATTTAAGGCTATGTTAA+TGG | + | chr3_3:35523514-35523533 | None:intergenic | 30.0% |
| AACGAAGATTGGATTAAGAT+AGG | - | chr3_3:35524513-35524532 | Msa0450180:intron | 30.0% | |
| ! | TGTGTATACCTATACCTTTT+TGG | + | chr3_3:35524639-35524658 | None:intergenic | 30.0% |
| GTTACTCAGAATCATGTTTA+TGG | - | chr3_3:35524697-35524716 | Msa0450180:CDS | 30.0% | |
| !!! | GTTTAAGGATGTGTTTTTAG+TGG | - | chr3_3:35524857-35524876 | Msa0450180:CDS | 30.0% |
| TTATAACTGCATTAATCCAG+TGG | + | chr3_3:35524982-35525001 | None:intergenic | 30.0% | |
| CTTAAAAACTTGAACCTGGT+TGG | + | chr3_3:35521617-35521636 | None:intergenic | 35.0% | |
| !!! | CTTGTTTTTTCTTTGGTCTG+TGG | + | chr3_3:35521727-35521746 | None:intergenic | 35.0% |
| CACAGACCAAAGAAAAAACA+AGG | - | chr3_3:35521725-35521744 | Msa0450180:three_prime_UTR | 35.0% | |
| ! | CTGAAGGATTCTTTTCTAGA+AGG | + | chr3_3:35521908-35521927 | None:intergenic | 35.0% |
| AAGCTGATGATAACTTCTGA+AGG | + | chr3_3:35521924-35521943 | None:intergenic | 35.0% | |
| AAAGTCATCACTTGAAGATG+AGG | - | chr3_3:35522100-35522119 | Msa0450180:CDS | 35.0% | |
| AGATACACATGGTAAGATAG+AGG | + | chr3_3:35522149-35522168 | None:intergenic | 35.0% | |
| GGCAATTTATTTGTCCAACT+TGG | - | chr3_3:35522295-35522314 | Msa0450180:CDS | 35.0% | |
| ACTTGCAGGAACTAAAAAGT+AGG | + | chr3_3:35522437-35522456 | None:intergenic | 35.0% | |
| ! | CATACTTTTGGTCCTTAAAG+AGG | + | chr3_3:35522483-35522502 | None:intergenic | 35.0% |
| !! | AATTTGTTGGGAGTGAAAAG+TGG | - | chr3_3:35522517-35522536 | Msa0450180:CDS | 35.0% |
| ! | ATTTGTTGGGAGTGAAAAGT+GGG | - | chr3_3:35522518-35522537 | Msa0450180:CDS | 35.0% |
| CAATGAATATGTAGGTGGAT+AGG | - | chr3_3:35522734-35522753 | Msa0450180:intron | 35.0% | |
| ! | TGGAGTTGGAAAGTTTTCTA+AGG | + | chr3_3:35522839-35522858 | None:intergenic | 35.0% |
| GAACCAAAAGTAATGCAGAT+GGG | + | chr3_3:35522883-35522902 | None:intergenic | 35.0% | |
| AGAACCAAAAGTAATGCAGA+TGG | + | chr3_3:35522884-35522903 | None:intergenic | 35.0% | |
| !!! | ACTTTTGGTTCTCCTTTAGT+TGG | - | chr3_3:35522892-35522911 | Msa0450180:intron | 35.0% |
| ATGCTACAAGGAGAGAAAAT+TGG | - | chr3_3:35522932-35522951 | Msa0450180:intron | 35.0% | |
| TGCTACAAGGAGAGAAAATT+GGG | - | chr3_3:35522933-35522952 | Msa0450180:intron | 35.0% | |
| TCATCACAAAATGGAAGAAG+TGG | + | chr3_3:35522963-35522982 | None:intergenic | 35.0% | |
| ! | TTTTGGTCGAAAGAAGATAG+AGG | + | chr3_3:35523018-35523037 | None:intergenic | 35.0% |
| !!! | GCTCATGAATGATTTGCTTT+TGG | + | chr3_3:35523070-35523089 | None:intergenic | 35.0% |
| TAAGTTCCAAAGGGTCTATA+AGG | + | chr3_3:35523243-35523262 | None:intergenic | 35.0% | |
| GCAGAAAATGTAAGTTCCAA+AGG | + | chr3_3:35523253-35523272 | None:intergenic | 35.0% | |
| ! | TACATTTTCTGCACTACAAG+TGG | - | chr3_3:35523261-35523280 | Msa0450180:CDS | 35.0% |
| ! | ACAAAGGAAGATTTTCCAGT+TGG | + | chr3_3:35523458-35523477 | None:intergenic | 35.0% |
| ! | AACATAGCCTTAAATGACCT+TGG | - | chr3_3:35523516-35523535 | Msa0450180:CDS | 35.0% |
| CCAAAAATAGGGAAGGATAA+AGG | + | chr3_3:35523554-35523573 | None:intergenic | 35.0% | |
| ! | CCTTTATCCTTCCCTATTTT+TGG | - | chr3_3:35523551-35523570 | Msa0450180:CDS | 35.0% |
| AAAATCGCCAAAAATAGGGA+AGG | + | chr3_3:35523561-35523580 | None:intergenic | 35.0% | |
| GTGTAATGCATATAACAGCA+TGG | + | chr3_3:35524092-35524111 | None:intergenic | 35.0% | |
| GTTATATGCATTACACACCT+TGG | - | chr3_3:35524096-35524115 | Msa0450180:intron | 35.0% | |
| ACATAGTTTCATTTCCACCA+AGG | + | chr3_3:35524116-35524135 | None:intergenic | 35.0% | |
| AGGTTATTACGATGCATTCA+AGG | - | chr3_3:35524374-35524393 | Msa0450180:intron | 35.0% | |
| ATTCAAGGATCAATTAGACC+CGG | - | chr3_3:35524389-35524408 | Msa0450180:intron | 35.0% | |
| ACATTTGCTTGGAAATCTTC+CGG | + | chr3_3:35524411-35524430 | None:intergenic | 35.0% | |
| ATTTCCAAGCAAATGTACAG+AGG | - | chr3_3:35524415-35524434 | Msa0450180:intron | 35.0% | |
| AACTTCCAGAAGACTTAGAA+GGG | - | chr3_3:35524490-35524509 | Msa0450180:intron | 35.0% | |
| TTTATATGGCTAAAGGAGGA+AGG | - | chr3_3:35524613-35524632 | Msa0450180:intron | 35.0% | |
| GGTATAGGTATACACAAAGA+TGG | - | chr3_3:35524643-35524662 | Msa0450180:intron | 35.0% | |
| TAGGTATACACAAAGATGGT+TGG | - | chr3_3:35524647-35524666 | Msa0450180:intron | 35.0% | |
| GTTGGAACATTATGAGAAGA+GGG | - | chr3_3:35524665-35524684 | Msa0450180:intron | 35.0% | |
| !!! | CAAGCCTTTTGATGATGTTA+AGG | - | chr3_3:35524752-35524771 | Msa0450180:CDS | 35.0% |
| TGATGTTAAGGAAAAGGTTG+AGG | - | chr3_3:35524764-35524783 | Msa0450180:CDS | 35.0% | |
| TGGAGGAATTTATAAGCAAG+TGG | - | chr3_3:35524790-35524809 | Msa0450180:CDS | 35.0% | |
| ! | TGGATTCTACGTTTGTTAAG+TGG | - | chr3_3:35524877-35524896 | Msa0450180:CDS | 35.0% |
| ! | ATTCTACGTTTGTTAAGTGG+TGG | - | chr3_3:35524880-35524899 | Msa0450180:CDS | 35.0% |
| GATTGTTCTTTATGGTCTGT+TGG | + | chr3_3:35524915-35524934 | None:intergenic | 35.0% | |
| ! | TGAGCTATATCTTGTTTGTG+AGG | - | chr3_3:35525118-35525137 | Msa0450180:five_prime_UTR | 35.0% |
| TCTTTGGTCTGTGGAAAGTA+TGG | + | chr3_3:35521718-35521737 | None:intergenic | 40.0% | |
| CATCAGGTGCTTTCAAAGAT+TGG | - | chr3_3:35521949-35521968 | Msa0450180:CDS | 40.0% | |
| TGGTAACAATGAAGCTGCTA+AGG | - | chr3_3:35522037-35522056 | Msa0450180:CDS | 40.0% | |
| ! | CATGCAACTTTGTAACTTGC+AGG | + | chr3_3:35522451-35522470 | None:intergenic | 40.0% |
| AAGAAGCAGATAGTGTTTGC+AGG | - | chr3_3:35522769-35522788 | Msa0450180:intron | 40.0% | |
| CAAAAGTAATGCAGATGGGA+GGG | + | chr3_3:35522879-35522898 | None:intergenic | 40.0% | |
| AAGGGTCTATAAGGACTCAA+AGG | + | chr3_3:35523234-35523253 | None:intergenic | 40.0% | |
| TTGAGTCCTTATAGACCCTT+TGG | - | chr3_3:35523234-35523253 | Msa0450180:intron | 40.0% | |
| ! | ATGTTGTCGCAGGCTTTTAA+GGG | + | chr3_3:35523388-35523407 | None:intergenic | 40.0% |
| ! | AATGTTGTCGCAGGCTTTTA+AGG | + | chr3_3:35523389-35523408 | None:intergenic | 40.0% |
| TGTTGTGTACTTAGACCAAC+TGG | - | chr3_3:35523440-35523459 | Msa0450180:CDS | 40.0% | |
| GAAGTAGTATGCTCAGACAA+AGG | + | chr3_3:35523474-35523493 | None:intergenic | 40.0% | |
| TTGTCTGAGCATACTACTTC+AGG | - | chr3_3:35523474-35523493 | Msa0450180:CDS | 40.0% | |
| AAGGATAAAGGTTGCATACC+AGG | + | chr3_3:35523542-35523561 | None:intergenic | 40.0% | |
| ATATGCATTACACACCTTGG+TGG | - | chr3_3:35524099-35524118 | Msa0450180:intron | 40.0% | |
| CATTTGCTTGGAAATCTTCC+GGG | + | chr3_3:35524410-35524429 | None:intergenic | 40.0% | |
| GAACTTCCAGAAGACTTAGA+AGG | - | chr3_3:35524489-35524508 | Msa0450180:intron | 40.0% | |
| ACTTAGAAGGGAACGAAGAT+TGG | - | chr3_3:35524502-35524521 | Msa0450180:intron | 40.0% | |
| ! | TAGAAGACTAGTTGAGCCTT+TGG | - | chr3_3:35524545-35524564 | Msa0450180:intron | 40.0% |
| CCATATAAACACGTCCATCA+CGG | + | chr3_3:35524602-35524621 | None:intergenic | 40.0% | |
| GGACGTGTTTATATGGCTAA+AGG | - | chr3_3:35524606-35524625 | Msa0450180:intron | 40.0% | |
| CGTGTTTATATGGCTAAAGG+AGG | - | chr3_3:35524609-35524628 | Msa0450180:intron | 40.0% | |
| GGTTGGAACATTATGAGAAG+AGG | - | chr3_3:35524664-35524683 | Msa0450180:intron | 40.0% | |
| CATTATGAGAAGAGGGATGA+AGG | - | chr3_3:35524672-35524691 | Msa0450180:intron | 40.0% | |
| ! | ATCATGTTTATGGGCTGAAG+TGG | - | chr3_3:35524707-35524726 | Msa0450180:CDS | 40.0% |
| ACATCATCAAAAGGCTTGTC+AGG | + | chr3_3:35524750-35524769 | None:intergenic | 40.0% | |
| TAAGGAAAAGGTTGAGGCAT+TGG | - | chr3_3:35524770-35524789 | Msa0450180:CDS | 40.0% | |
| TGAGAAAGATGAGGCTGATA+AGG | - | chr3_3:35524830-35524849 | Msa0450180:CDS | 40.0% | |
| GGCTGATAAGGATGTGTTTA+AGG | - | chr3_3:35524842-35524861 | Msa0450180:CDS | 40.0% | |
| ACTGCATTAATCCAGTGGAT+AGG | + | chr3_3:35524977-35524996 | None:intergenic | 40.0% | |
| GTTGGATCATGCACTTTGTT+TGG | - | chr3_3:35525050-35525069 | Msa0450180:five_prime_UTR | 40.0% | |
| AACACACACACACACACACA+TGG | - | chr3_3:35521779-35521798 | Msa0450180:three_prime_UTR | 45.0% | |
| ACACACATGGCTTCATCAAG+AGG | - | chr3_3:35521792-35521811 | Msa0450180:three_prime_UTR | 45.0% | |
| GTCATTTGATGCGTCCTTGA+AGG | - | chr3_3:35521857-35521876 | Msa0450180:CDS | 45.0% | |
| TGGTTTCTTGTGAGCCTTCA+AGG | + | chr3_3:35521874-35521893 | None:intergenic | 45.0% | |
| TCTAGAAGGTAGTGTCTCTC+TGG | + | chr3_3:35521894-35521913 | None:intergenic | 45.0% | |
| ATCATCAGCTTTCCAGCATC+AGG | - | chr3_3:35521933-35521952 | Msa0450180:CDS | 45.0% | |
| !! | TCTTTGAAAGCACCTGATGC+TGG | + | chr3_3:35521948-35521967 | None:intergenic | 45.0% |
| TGGGAGTGAAAAGTGGGTAT+AGG | - | chr3_3:35522524-35522543 | Msa0450180:CDS | 45.0% | |
| GGGAGTGAAAAGTGGGTATA+GGG | - | chr3_3:35522525-35522544 | Msa0450180:CDS | 45.0% | |
| TGGCTATTCTGGCAACACTT+TGG | - | chr3_3:35522812-35522831 | Msa0450180:intron | 45.0% | |
| GGCTATTCTGGCAACACTTT+GGG | - | chr3_3:35522813-35522832 | Msa0450180:intron | 45.0% | |
| !!! | CGATCGGAAGATTTTGGAGT+TGG | + | chr3_3:35522853-35522872 | None:intergenic | 45.0% |
| ! | GGGATACGATCGGAAGATTT+TGG | + | chr3_3:35522859-35522878 | None:intergenic | 45.0% |
| CCAAAAGTAATGCAGATGGG+AGG | + | chr3_3:35522880-35522899 | None:intergenic | 45.0% | |
| ! | CCTCCCATCTGCATTACTTT+TGG | - | chr3_3:35522877-35522896 | Msa0450180:intron | 45.0% |
| AAGAAGATAGAGGAGCTAGG+AGG | + | chr3_3:35523008-35523027 | None:intergenic | 45.0% | |
| CGAAAGAAGATAGAGGAGCT+AGG | + | chr3_3:35523011-35523030 | None:intergenic | 45.0% | |
| TTCATGAGCGAATCGAGTCT+TGG | - | chr3_3:35523081-35523100 | Msa0450180:intron | 45.0% | |
| ! | TCACAAGACATGCTGCTTGT+AGG | - | chr3_3:35523160-35523179 | Msa0450180:intron | 45.0% |
| ! | ACATGCTGCTTGTAGGCTAA+TGG | - | chr3_3:35523167-35523186 | Msa0450180:intron | 45.0% |
| ! | CATGCTGCTTGTAGGCTAAT+GGG | - | chr3_3:35523168-35523187 | Msa0450180:intron | 45.0% |
| AAACCCTGATGCAATTCTGC+AGG | - | chr3_3:35523311-35523330 | Msa0450180:CDS | 45.0% | |
| TGACCTGCAGAATTGCATCA+GGG | + | chr3_3:35523317-35523336 | None:intergenic | 45.0% | |
| ATGACCTGCAGAATTGCATC+AGG | + | chr3_3:35523318-35523337 | None:intergenic | 45.0% | |
| !! | AAGCTCTGAAGAAGAAGCTG+AGG | - | chr3_3:35523356-35523375 | Msa0450180:CDS | 45.0% |
| ! | TGTTGTCGCAGGCTTTTAAG+GGG | + | chr3_3:35523387-35523406 | None:intergenic | 45.0% |
| CCAGTTCAAAATGTTGTCGC+AGG | + | chr3_3:35523398-35523417 | None:intergenic | 45.0% | |
| ! | CCTGCGACAACATTTTGAAC+TGG | - | chr3_3:35523395-35523414 | Msa0450180:CDS | 45.0% |
| TCTGAGCATACTACTTCAGG+TGG | - | chr3_3:35523477-35523496 | Msa0450180:CDS | 45.0% | |
| TACCAGGCCAAGGTCATTTA+AGG | + | chr3_3:35523526-35523545 | None:intergenic | 45.0% | |
| TTTCATCCTATCCTCCACAG+CGG | + | chr3_3:35524313-35524332 | None:intergenic | 45.0% | |
| TGGACAGTTACAGAGAAACG+CGG | - | chr3_3:35524337-35524356 | Msa0450180:intron | 45.0% | |
| CTAGCCTCTGTACATTTGCT+TGG | + | chr3_3:35524422-35524441 | None:intergenic | 45.0% | |
| ! | GCTAGAACTTGCAGGAGTAT+GGG | - | chr3_3:35524437-35524456 | Msa0450180:intron | 45.0% |
| TCGTTCCCTTCTAAGTCTTC+TGG | + | chr3_3:35524498-35524517 | None:intergenic | 45.0% | |
| AGACATTCAAGGAACCGTGA+TGG | - | chr3_3:35524585-35524604 | Msa0450180:intron | 45.0% | |
| !! | CCGTGATGGACGTGTTTATA+TGG | - | chr3_3:35524599-35524618 | Msa0450180:intron | 45.0% |
| CTAAAGGAGGAAGGCCAAAA+AGG | - | chr3_3:35524622-35524641 | Msa0450180:intron | 45.0% | |
| ! | GAGGAAGGCCAAAAAGGTAT+AGG | - | chr3_3:35524628-35524647 | Msa0450180:intron | 45.0% |
| TATGAGAAGAGGGATGAAGG+TGG | - | chr3_3:35524675-35524694 | Msa0450180:intron | 45.0% | |
| ! | ATGTTTATGGGCTGAAGTGG+AGG | - | chr3_3:35524710-35524729 | Msa0450180:CDS | 45.0% |
| CAAGTGGCATGAGAAAGATG+AGG | - | chr3_3:35524806-35524825 | Msa0450180:CDS | 45.0% | |
| AGATGAGGCTGAGAAAGATG+AGG | - | chr3_3:35524821-35524840 | Msa0450180:CDS | 45.0% | |
| ! | GTCTTGTTGAAGTGTGACAC+AGG | - | chr3_3:35524946-35524965 | Msa0450180:CDS | 45.0% |
| AGTGTGAGCTATAGTGCAGT+TGG | - | chr3_3:35525032-35525051 | Msa0450180:five_prime_UTR | 45.0% | |
| CACATGGCTTCATCAAGAGG+TGG | - | chr3_3:35521795-35521814 | Msa0450180:three_prime_UTR | 50.0% | |
| GTGTTTGCAGGACATTCGTC+TGG | - | chr3_3:35522781-35522800 | Msa0450180:intron | 50.0% | |
| TTTGCAGGACATTCGTCTGG+TGG | - | chr3_3:35522784-35522803 | Msa0450180:intron | 50.0% | |
| AGTGTTGCCAGAATAGCCAC+TGG | + | chr3_3:35522811-35522830 | None:intergenic | 50.0% | |
| AGAGGAGCTAGGAGGATTCT+TGG | + | chr3_3:35523000-35523019 | None:intergenic | 50.0% | |
| TGCACTACAAGTGGCGATGA+AGG | - | chr3_3:35523270-35523289 | Msa0450180:CDS | 50.0% | |
| AGCCTTAAATGACCTTGGCC+TGG | - | chr3_3:35523521-35523540 | Msa0450180:CDS | 50.0% | |
| AAAGGTTGCATACCAGGCCA+AGG | + | chr3_3:35523536-35523555 | None:intergenic | 50.0% | |
| TCAAGCAGCTGCAGCATTAG+AGG | - | chr3_3:35524245-35524264 | Msa0450180:intron | 50.0% | |
| CAGCTGCAGCATTAGAGGAA+CGG | - | chr3_3:35524250-35524269 | Msa0450180:intron | 50.0% | |
| GCTACAAAAGATAGCCGCTG+TGG | - | chr3_3:35524296-35524315 | Msa0450180:intron | 50.0% | |
| ACAAAAGATAGCCGCTGTGG+AGG | - | chr3_3:35524299-35524318 | Msa0450180:intron | 50.0% | |
| ! | GGAGGATAGGATGAAAGCAC+TGG | - | chr3_3:35524317-35524336 | Msa0450180:intron | 50.0% |
| GGACAGTTACAGAGAAACGC+GGG | - | chr3_3:35524338-35524357 | Msa0450180:intron | 50.0% | |
| GACAGTTACAGAGAAACGCG+GGG | - | chr3_3:35524339-35524358 | Msa0450180:intron | 50.0% | |
| ACGCGGGGACATCAGAAAAA+AGG | - | chr3_3:35524354-35524373 | Msa0450180:intron | 50.0% | |
| GTACAGAGGCTAGAACTTGC+AGG | - | chr3_3:35524429-35524448 | Msa0450180:intron | 50.0% | |
| GGCTAGAACTTGCAGGAGTA+TGG | - | chr3_3:35524436-35524455 | Msa0450180:intron | 50.0% | |
| !! | GGAAAAGGTTGAGGCATTGG+AGG | - | chr3_3:35524773-35524792 | Msa0450180:CDS | 50.0% |
| ACATTCGTCTGGTGGTCCAG+TGG | - | chr3_3:35522792-35522811 | Msa0450180:intron | 55.0% | |
| TGGTGGTCCAGTGGCTATTC+TGG | - | chr3_3:35522801-35522820 | Msa0450180:intron | 55.0% | |
| GCAGATGGGAGGGATACGAT+CGG | + | chr3_3:35522869-35522888 | None:intergenic | 55.0% | |
| AGATAGCCGCTGTGGAGGAT+AGG | - | chr3_3:35524304-35524323 | Msa0450180:intron | 55.0% | |
| ! | CACAGGTGCTGCCTATCCAC+TGG | - | chr3_3:35524963-35524982 | Msa0450180:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 35521612 | 35525190 | 35521612 | ID=Msa0450180;Name=Msa0450180 |
| chr3_3 | mRNA | 35521612 | 35525190 | 35521612 | ID=Msa0450180-mRNA-1;Parent=Msa0450180;Name=Msa0450180-mRNA-1;_AED=0.03;_eAED=0.03;_QI=186|1|1|1|1|1|3|228|619 |
| chr3_3 | exon | 35521612 | 35522580 | 35521612 | ID=Msa0450180-mRNA-1:exon:6312;Parent=Msa0450180-mRNA-1 |
| chr3_3 | exon | 35523260 | 35524054 | 35523260 | ID=Msa0450180-mRNA-1:exon:6311;Parent=Msa0450180-mRNA-1 |
| chr3_3 | exon | 35524681 | 35525190 | 35524681 | ID=Msa0450180-mRNA-1:exon:6310;Parent=Msa0450180-mRNA-1 |
| chr3_3 | five_prime_UTR | 35525005 | 35525190 | 35525005 | ID=Msa0450180-mRNA-1:five_prime_utr;Parent=Msa0450180-mRNA-1 |
| chr3_3 | CDS | 35524681 | 35525004 | 35524681 | ID=Msa0450180-mRNA-1:cds;Parent=Msa0450180-mRNA-1 |
| chr3_3 | CDS | 35523260 | 35524054 | 35523260 | ID=Msa0450180-mRNA-1:cds;Parent=Msa0450180-mRNA-1 |
| chr3_3 | CDS | 35521840 | 35522580 | 35521840 | ID=Msa0450180-mRNA-1:cds;Parent=Msa0450180-mRNA-1 |
| chr3_3 | three_prime_UTR | 35521612 | 35521839 | 35521612 | ID=Msa0450180-mRNA-1:three_prime_utr;Parent=Msa0450180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
